BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC134822.6 + phase: 0
(289 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC87239 similar to PIR|T09028|T09028 hypothetical protein T27E11... 481 e-136
TC80668 similar to GP|18389274|gb|AAL67080.1 unknown protein {Ar... 79 3e-15
CA860239 weakly similar to SP|P17624|NUDC_ Nuclear movement prot... 65 3e-11
AJ501735 similar to GP|18389274|gb unknown protein {Arabidopsis ... 41 5e-08
TC78571 weakly similar to GP|4914375|gb|AAD32911.1| unknown prot... 35 0.026
TC76851 homologue to PIR|S40122|S40122 high mobility group prote... 35 0.026
BQ752218 similar to GP|19170914|emb hypothetical protein {Enceph... 33 0.13
TC76583 similar to GP|8886934|gb|AAF80620.1| F2D10.25 {Arabidops... 33 0.13
BG584376 33 0.17
TC88982 weakly similar to GP|15450828|gb|AAK96685.1 putative AAA... 32 0.22
CB891165 homologue to PIR|H82068|H820 RNA polymerase-associated ... 32 0.28
TC77010 similar to PIR|S59560|S59560 histone H1.41 - garden pea,... 32 0.28
TC85212 similar to PIR|S44294|S44294 legumin A precursor - sprin... 32 0.37
TC77886 similar to GP|14532516|gb|AAK63986.1 AT5g05210/K2A11_8 {... 32 0.37
TC77763 similar to GP|15215674|gb|AAK91382.1 AT4g27500/F27G19_10... 31 0.49
TC82664 weakly similar to PIR|B84681|B84681 hypothetical protein... 31 0.49
BQ139600 similar to PIR|B84681|B846 hypothetical protein At2g281... 31 0.49
TC85721 similar to SP|P08283|H1_PEA Histone H1. [Garden pea] {Pi... 30 0.83
TC91072 weakly similar to GP|22136510|gb|AAM91333.1 unknown prot... 30 0.83
TC88716 weakly similar to GP|20258812|gb|AAM14017.1 putative cyt... 30 1.1
>TC87239 similar to PIR|T09028|T09028 hypothetical protein T27E11.130 -
Arabidopsis thaliana, partial (69%)
Length = 1228
Score = 481 bits (1239), Expect = e-136
Identities = 246/297 (82%), Positives = 262/297 (87%), Gaps = 9/297 (3%)
Frame = +1
Query: 1 MAIISDYQDDNQTKTSSSSSSQPKPSKPIPFSSTFDPSNPTTFLEKVFDFIAKESTNFFD 60
MAIISDYQ++ QT SSSSQPKPSKPIPFSSTFDPSNPT FLE VFDFIAKEST+FFD
Sbjct: 61 MAIISDYQEETQT----SSSSQPKPSKPIPFSSTFDPSNPTAFLENVFDFIAKESTDFFD 228
Query: 61 KDSAEKVVLSAVRAARVKKAKSVAAEKAKIAAKEKAKA--AAEKKLNDEKSEAVTEKIDE 118
DSAEKVVLSAVRA +VKKAK+VAAEKAKIAA+EKAK AA ++K++ V EK D+
Sbjct: 229 NDSAEKVVLSAVRAVKVKKAKAVAAEKAKIAAEEKAKVDKAASVAAAEKKAKEVDEKEDD 408
Query: 119 K-------AAPNQGNGMDLEKYSWTQTLQELNVNVPVPNGTKSGFVICEIKKNHLKVGLK 171
K AAPNQGNGMDLEKYSWTQTLQELNVNVPVPNGTKS FV CEIKKNHLKVG+K
Sbjct: 409 KKDGESGLAAPNQGNGMDLEKYSWTQTLQELNVNVPVPNGTKSRFVTCEIKKNHLKVGIK 588
Query: 172 GQPPIIDRELYKSIKPDECYWSIEDQNTVSILLTKHDQMDWWKCLVKGDPEINTQKVEPA 231
GQPPIID ELYKSIKPD+CYWSIEDQNT+SILLTKHDQMDWWKCLVKGDPEINTQKVEP
Sbjct: 589 GQPPIIDGELYKSIKPDDCYWSIEDQNTLSILLTKHDQMDWWKCLVKGDPEINTQKVEPE 768
Query: 232 SSKLGDLDSETRMTVEKMMFDQRQKSMGLPTSEELQKEEMMKKFMSQHPNMDFSGAK 288
SSKLGDLD ETR TVEKMMFDQRQKSMGLPTSEELQK+E+MKKFMSQHP MDFS AK
Sbjct: 769 SSKLGDLDPETRQTVEKMMFDQRQKSMGLPTSEELQKQEIMKKFMSQHPEMDFSNAK 939
>TC80668 similar to GP|18389274|gb|AAL67080.1 unknown protein {Arabidopsis
thaliana}, complete
Length = 691
Score = 78.6 bits (192), Expect = 3e-15
Identities = 50/201 (24%), Positives = 88/201 (42%), Gaps = 5/201 (2%)
Frame = +1
Query: 94 EKAKAAAEKKLNDEKSEAVTEKIDEKAAPNQG-----NGMDLEKYSWTQTLQELNVNVPV 148
+K E +E+ + K+ EK AP + NG + + W QTL E+N+ + +
Sbjct: 10 QKKNNCEEPNTEEEEIKDEFTKMAEKLAPEKRHIFLHNGQKV--FEWDQTLDEVNIYINL 183
Query: 149 PNGTKSGFVICEIKKNHLKVGLKGQPPIIDRELYKSIKPDECYWSIEDQNTVSILLTKHD 208
P S C I+ H+++G+KG PP ++ +L +K D +W++ED + + I L K D
Sbjct: 184 PPNVHSKLFYCTIQSKHIELGIKGNPPFLNHDLTSPVKTDSSFWTLED-DIMHITLNKRD 360
Query: 209 QMDWWKCLVKGDPEINTQKVEPASSKLGDLDSETRMTVEKMMFDQRQKSMGLPTSEELQK 268
+ W + G +++ DL+ QK
Sbjct: 361 KGQTWPSPILGQGQLDAYST--------DLE---------------------------QK 435
Query: 269 EEMMKKFMSQHPNMDFSGAKF 289
M+++F ++P DFS A+F
Sbjct: 436 RLMLQRFQEENPGFDFSQAQF 498
>CA860239 weakly similar to SP|P17624|NUDC_ Nuclear movement protein NUDC.
[Aspergillus nidulans] {Emericella nidulans}, partial
(24%)
Length = 271
Score = 65.1 bits (157), Expect = 3e-11
Identities = 30/51 (58%), Positives = 37/51 (71%)
Frame = +1
Query: 133 YSWTQTLQELNVNVPVPNGTKSGFVICEIKKNHLKVGLKGQPPIIDRELYK 183
Y W QTLQE+++ +PVP GT+ +I IKK L VGLKGQPPII+ EL K
Sbjct: 118 YKWKQTLQEVDITIPVPKGTRGRNLIVTIKKKSLLVGLKGQPPIIEGELCK 270
>AJ501735 similar to GP|18389274|gb unknown protein {Arabidopsis thaliana},
partial (95%)
Length = 599
Score = 41.2 bits (95), Expect(2) = 5e-08
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Frame = +1
Query: 99 AAEKKLNDEKSEAVTE--KIDEKAAPNQG-----NGMDLEKYSWTQTLQELNVNVPVPNG 151
A ++ N E+ E E K+ EK AP + NG + + W QTL E+N+ + +P
Sbjct: 7 AGGEEPNTEEEEIKDEFTKMAEKLAPEKRHIFLHNGQKV--FEWDQTLDEVNIYINLPPN 180
Query: 152 TKSGFVICEIKKNHLKVGLK 171
S C I+ H+++G+K
Sbjct: 181 VHSKLFYCTIQSKHIELGIK 240
Score = 32.7 bits (73), Expect(2) = 5e-08
Identities = 24/110 (21%), Positives = 43/110 (38%)
Frame = +2
Query: 180 ELYKSIKPDECYWSIEDQNTVSILLTKHDQMDWWKCLVKGDPEINTQKVEPASSKLGDLD 239
+L +K D +W++ED + + I L K D+ W + G +++ DL+
Sbjct: 245 DLTSPVKTDSSFWTLED-DIMHITLNKRDKGQTWPSPILGQGQLDAYST--------DLE 397
Query: 240 SETRMTVEKMMFDQRQKSMGLPTSEELQKEEMMKKFMSQHPNMDFSGAKF 289
QK M+++F ++P DFS A+F
Sbjct: 398 ---------------------------QKRLMLQRFQEENPGFDFSQAQF 466
>TC78571 weakly similar to GP|4914375|gb|AAD32911.1| unknown protein
{Arabidopsis thaliana}, partial (25%)
Length = 1950
Score = 35.4 bits (80), Expect = 0.026
Identities = 36/122 (29%), Positives = 53/122 (42%), Gaps = 3/122 (2%)
Frame = +1
Query: 14 KTSSSSSSQPKPSKPIPFSSTFDPSNPT-TFLEKVFDFIAKESTNFFDKDS--AEKVVLS 70
K SS S + PS P+ S D ++P+ T F+ K N + + V
Sbjct: 529 KQSSESDATASPS-PVAASCVTDVASPSSTSFSSEFEARLKHLLNCHSNNPKLTPEEVAE 705
Query: 71 AVRAARVKKAKSVAAEKAKIAAKEKAKAAAEKKLNDEKSEAVTEKIDEKAAPNQGNGMDL 130
A R A V K AAE A+ AA+EKA AA+ + + + E A N+G +
Sbjct: 706 ASRKAAVTATK--AAEAARAAAEEKAAIAAKAVAAAKSALDLVASFSEDAINNKGKKSEK 879
Query: 131 EK 132
E+
Sbjct: 880 EQ 885
>TC76851 homologue to PIR|S40122|S40122 high mobility group protein HMG-1 -
garden pea, partial (92%)
Length = 863
Score = 35.4 bits (80), Expect = 0.026
Identities = 34/108 (31%), Positives = 52/108 (47%), Gaps = 5/108 (4%)
Frame = +2
Query: 27 KPIPFSSTFDPSNPTTFLEKVFDFIAKESTNFFDKDSAEKVVLSAVRAARVKKAKSVA-A 85
KP DP+ P F F+ ++ F KD+ + +SAV A K KS++ A
Sbjct: 191 KPAKGKEPKDPNKPKRPPSAFFVFM-EDFRKQFKKDNPDNKAVSAVGKAAGAKWKSLSEA 367
Query: 86 EKAKIAAK-EKAKAAAEKKL---NDEKSEAVTEKIDEKAAPNQGNGMD 129
EKA AAK EK KA EK + N +++E +E++ ++ D
Sbjct: 368 EKAPYAAKAEKRKAEYEKTMKAYNKKQAEGPAAVEEEESGKSESEVHD 511
>BQ752218 similar to GP|19170914|emb hypothetical protein {Encephalitozoon
cuniculi}, partial (5%)
Length = 637
Score = 33.1 bits (74), Expect = 0.13
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Frame = -2
Query: 74 AARVKKAKSVAAEKAKIAAKEKAKAA------AEKKLNDEKSEA 111
A + KKA+ A +KAK KE K A AEKK+ +EK EA
Sbjct: 555 AKKAKKAREAAYKKAKEEKKEAEKKAKEEKRQAEKKIKEEKKEA 424
Score = 32.7 bits (73), Expect = 0.17
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = -2
Query: 78 KKAKSVAAEKAKIAAKEKAKAAAEKKLNDEKSEAVTEKIDEK 119
KKA+ AA+KAK KA+ AA KK +EK EA + +EK
Sbjct: 576 KKAREEAAKKAK-----KAREAAYKKAKEEKKEAEKKAKEEK 466
>TC76583 similar to GP|8886934|gb|AAF80620.1| F2D10.25 {Arabidopsis
thaliana}, partial (3%)
Length = 794
Score = 33.1 bits (74), Expect = 0.13
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +3
Query: 14 KTSSSSSSQPKPSKPIPFSSTFDPSNPTTFLEKVFDFIAKESTNFFDKDS 63
KTS S PS P+ FSS+ P P +LE FDF +S + D S
Sbjct: 78 KTSGFSFDDSVPSTPL-FSSSSSPQRPKDWLENAFDFSRFDSFSTHDSVS 224
>BG584376
Length = 741
Score = 32.7 bits (73), Expect = 0.17
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = -3
Query: 52 AKESTNFFDKDSAEKVVLSAVRAARVKKAKSVAAEKAKIAAKEKAKAAAEKKLNDEKSEA 111
A++ + + EK+V ++ + AEK + + KE+ + EK K++
Sbjct: 649 AQKGEEEVEPKTIEKLVTKENLEEKIVGMSAEDAEKERNSKKEEVEEKNEKTYESSKNQN 470
Query: 112 VTEKIDEKAAPNQGNGMDLEKYS 134
+ EK EKA P+ N + EK S
Sbjct: 469 LEEKEVEKAEPSAPNVPEKEKES 401
>TC88982 weakly similar to GP|15450828|gb|AAK96685.1 putative AAA-type
ATPase {Arabidopsis thaliana}, partial (34%)
Length = 859
Score = 32.3 bits (72), Expect = 0.22
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 13/108 (12%)
Frame = +2
Query: 13 TKTSSSSSSQPKPSKPIPFSSTFDPS------------NPTTFLEKVFDFIAKESTNFFD 60
T SS S P P S FDP N + +KVFD + K+ +
Sbjct: 215 TDQSSDKKSDSPPPAEEPNKSGFDPESLERAAKALREINSSPHAKKVFDLMRKQEQSRLA 394
Query: 61 KDSAEKVVLSAVRA-ARVKKAKSVAAEKAKIAAKEKAKAAAEKKLNDE 107
+ AEKV ++ + + + +A E+ + ++ + A + DE
Sbjct: 395 ELDAEKVNYELIQTQGDIDRLRKMAEEQRNLIQEQNQRQAQVLRFEDE 538
>CB891165 homologue to PIR|H82068|H820 RNA polymerase-associated protein HepA
VC2506 [imported] - Vibrio cholerae, partial (1%)
Length = 692
Score = 32.0 bits (71), Expect = 0.28
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = -2
Query: 39 NPTTFLEKVFDFIAKESTNF-FDKDSAEKVVLSAVRAARVKKAKSVAAEKAKIAAKEKAK 97
N ++K+ FI S NF K+ E + + + ++ + ++ K KEK++
Sbjct: 583 NVVKLVQKMTSFIQNLSKNFVMTKNVVEDHINALRKREKLVQLMRDGKKQKKSMMKEKSQ 404
Query: 98 AAAEKKLNDEKSEAVTEKIDEKAAPNQGNGMDLEKYSWTQTLQ 140
E K E+ E V EKI + Q N ++LEK ++++
Sbjct: 403 FEDEAKRLVEEGEKVEEKI--RILVEQKNSIELEKIKLKESME 281
>TC77010 similar to PIR|S59560|S59560 histone H1.41 - garden pea, partial
(82%)
Length = 1535
Score = 32.0 bits (71), Expect = 0.28
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +2
Query: 51 IAKESTNFFDKDSAEKVVLSAVRAARVKKAKSVAAEKAKIAAKEKAKAAAEKKLNDEKSE 110
+ K +F + K A KKAK+V AK A K KAKAAA K K +
Sbjct: 317 LVKVKNSFKIAPAVAKTAPVKAAIAPAKKAKAVTKPAAKAATKPKAKAAAVKPKAAAKPK 496
Query: 111 AVTE 114
A +
Sbjct: 497 AAAK 508
>TC85212 similar to PIR|S44294|S44294 legumin A precursor - spring vetch,
partial (90%)
Length = 1769
Score = 31.6 bits (70), Expect = 0.37
Identities = 33/119 (27%), Positives = 50/119 (41%), Gaps = 16/119 (13%)
Frame = +1
Query: 14 KTSSSSSSQPKPSKPIPFSSTFDPSNPTTFL------EKVFDFIAKESTNFFDKDSAEKV 67
+T+ +S Q PS +PF++ +PT L KV D +A S +V
Sbjct: 199 QTTGNSDVQVWPSLVVPFNAILSADHPTPMLLKKFSSNKVVDILAWYS----------RV 348
Query: 68 VLSAVRAARVKKAKSVAA-------EKAKIAAKEKAKAAAEKKLNDEK---SEAVTEKI 116
VL +R+ R + VA A + K + A LN EK SE VT+++
Sbjct: 349 VLRLLRSHRNLNRERVAGSGNLNRERVAGLGNLNKERVAGSGNLNKEKDAGSETVTKRL 525
>TC77886 similar to GP|14532516|gb|AAK63986.1 AT5g05210/K2A11_8 {Arabidopsis
thaliana}, partial (46%)
Length = 1439
Score = 31.6 bits (70), Expect = 0.37
Identities = 30/126 (23%), Positives = 60/126 (46%), Gaps = 4/126 (3%)
Frame = +3
Query: 7 YQDDNQTKTSSSSSSQPKPSKPIPFSSTFDPSNPTTFLEKVFDFIAKESTNFFDKDSAEK 66
YQD+ + + ++ S+P P EK+ + + K++ +++++
Sbjct: 657 YQDNKRKRDDATDESKPAPD------------------EKLQEKVKKDAA-----EASKQ 767
Query: 67 VVLSAVRAARVKKAKSVAAEKAKIAAK---EKAKAAAEKKLND-EKSEAVTEKIDEKAAP 122
+V V+ + + + +K KI+ E+AK E K ND EK EA+ +K KAA
Sbjct: 768 LVFGHVKL----QDEEMLGKKRKISKHKELERAKKLEELKKNDPEKGEAIAKKEAWKAAM 935
Query: 123 NQGNGM 128
++ +G+
Sbjct: 936 DRASGI 953
>TC77763 similar to GP|15215674|gb|AAK91382.1 AT4g27500/F27G19_100
{Arabidopsis thaliana}, partial (38%)
Length = 2297
Score = 31.2 bits (69), Expect = 0.49
Identities = 19/47 (40%), Positives = 24/47 (50%)
Frame = +1
Query: 73 RAARVKKAKSVAAEKAKIAAKEKAKAAAEKKLNDEKSEAVTEKIDEK 119
R + KAK A K K+A K AKAA + + EK V EK +K
Sbjct: 1609 REEEIAKAKLAAERKKKMAEKAAAKAALKAQKEAEKKLKVLEKKAKK 1749
>TC82664 weakly similar to PIR|B84681|B84681 hypothetical protein At2g28130
[imported] - Arabidopsis thaliana, partial (13%)
Length = 681
Score = 31.2 bits (69), Expect = 0.49
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 79 KAKSVAAEKAKIAAKEKAKAAAEKKLNDE-KSEAVTEKIDEK 119
K + AEK K AK+KAKA +KK +DE + EA ++ EK
Sbjct: 163 KEQEKLAEKQKKQAKKKAKANEKKKYDDEDRKEAHLNRLVEK 288
>BQ139600 similar to PIR|B84681|B846 hypothetical protein At2g28130
[imported] - Arabidopsis thaliana, partial (4%)
Length = 705
Score = 31.2 bits (69), Expect = 0.49
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 79 KAKSVAAEKAKIAAKEKAKAAAEKKLNDE-KSEAVTEKIDEK 119
K + AEK K AK+KAKA +KK +DE + EA ++ EK
Sbjct: 485 KEQEKLAEKQKKQAKKKAKANEKKKYDDEDRKEAHLNRLVEK 610
>TC85721 similar to SP|P08283|H1_PEA Histone H1. [Garden pea] {Pisum
sativum}, partial (60%)
Length = 995
Score = 30.4 bits (67), Expect = 0.83
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Frame = +1
Query: 70 SAVRAARVKKAKSVAAEKAK---------IAAKEKAKAAAEKKLNDEKSEAVTE-KIDEK 119
SA + A KAK A KAK + AK KA AA + K KS+A ++ K K
Sbjct: 487 SATKPAAKVKAKPAAKPKAKAVVKPKTKSVTAKPKAAAATKPKPAATKSKAASKAKTAAK 666
Query: 120 AAPN 123
A PN
Sbjct: 667 AKPN 678
>TC91072 weakly similar to GP|22136510|gb|AAM91333.1 unknown protein
{Arabidopsis thaliana}, partial (15%)
Length = 1021
Score = 30.4 bits (67), Expect = 0.83
Identities = 26/80 (32%), Positives = 40/80 (49%), Gaps = 4/80 (5%)
Frame = +2
Query: 52 AKESTNFFDKDSAEKVVLSAVRAARVKKAKSVAAEKAKIAAKEKAKAAAEKKLNDEKSE- 110
++E+ + +D E L + R+AR KKAK + K+ KEK K EK+ +EK +
Sbjct: 716 SEETRSLQPQDEGEPKKLPS-RSARRKKAKRKWLRELKLKEKEKEK---EKENENEKDKL 883
Query: 111 ---AVTEKIDEKAAPNQGNG 127
V EK D++ NG
Sbjct: 884 HPSQVLEKDDQQIPIKDNNG 943
>TC88716 weakly similar to GP|20258812|gb|AAM14017.1 putative cytochrome
P450 homolog {Arabidopsis thaliana}, partial (57%)
Length = 1228
Score = 30.0 bits (66), Expect = 1.1
Identities = 14/32 (43%), Positives = 18/32 (55%)
Frame = -3
Query: 11 NQTKTSSSSSSQPKPSKPIPFSSTFDPSNPTT 42
N TKT+ S S PS P+P S S+P+T
Sbjct: 728 NSTKTAESPYSHYSPSHPLPSSIVHQSSSPST 633
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.309 0.126 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,727,276
Number of Sequences: 36976
Number of extensions: 106544
Number of successful extensions: 834
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of query: 289
length of database: 9,014,727
effective HSP length: 95
effective length of query: 194
effective length of database: 5,502,007
effective search space: 1067389358
effective search space used: 1067389358
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC134822.6