TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC134521.1 - phase: 0 /pseudo
         (324 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CA921522                                                              203  6e-53
BE203370                                                              183  7e-47
AL366606                                                               73  2e-13
TC79177                                                                28  6.3
TC93873 similar to SP|P57703|METE_PSEAE 5-methyltetrahydropteroy...    28  6.3
TC85544 homologue to GP|6984142|gb|AAF34771.1| 40S ribosomal pro...    27  8.2
TC85541 homologue to GP|166867|gb|AAA32866.1|| ribosomal protein...    27  8.2

>CA921522 
          Length = 767

 Score =  203 bits (517), Expect = 6e-53
 Identities = 100/208 (48%), Positives = 137/208 (65%), Gaps = 3/208 (1%)
 Frame = +3

Query: 118 EVADIKDKFTTKDGLPCLPYNFLHQKATTCFEKSKTDDFESILALLIYGIVLFPKVDKFV 177
           E  ++K    T+        +FL+++ T   +      F SILALL+YG+VLFP +D FV
Sbjct: 3   ETDEVKTHLITRGKFLGFSTDFLYERTTFFDKMGVAYAFNSILALLVYGLVLFPSLDNFV 182

Query: 178 DMNAIRIFLTQNPVPVLLADTYVAIHDRTSHGKGTIVCCTPLLHRWITSHLPRP---SIR 234
           D+ AI+IFL++NPVP LL DTY++IH RT  G+GTI+CC  LL+RWITSHLPR    +  
Sbjct: 183 DIKAIQIFLSRNPVPTLLGDTYLSIHRRTQAGRGTILCCAQLLYRWITSHLPRTPRFTTN 362

Query: 235 PEPIPWSQKLMTWTPKDIIWFNPSCDPEFIIDSCGDFNNVPLLGTQGGISYSPILARRQF 294
           PE + WS++LM+ TP +++W++   D   IIDSCG F NVPLLG +GGISY+P LAR QF
Sbjct: 363 PENLLWSKRLMSLTPAEVVWYDRVYDKGTIIDSCGKFANVPLLGMEGGISYNPTLARHQF 542

Query: 295 EYYTEMKPVYLILDRDFFLYKKDDANQR 322
            Y  E KP+ + L+  ++L   D    R
Sbjct: 543 GYPMERKPLSIYLENVYYLNADDSTGMR 626


>BE203370 
          Length = 454

 Score =  183 bits (465), Expect = 7e-47
 Identities = 93/151 (61%), Positives = 111/151 (72%)
 Frame = +1

Query: 69  HGFTFPDFQLFPTLEEYSHWVGLPVLDEVPFHAFGPIPKIPTIAKALHLEVADIKDKFTT 128
           H FTFPD+QL PTLEEYS+ VG PVLD+VPF  F PIPK  TIA ALHLE + IK K T 
Sbjct: 1   HCFTFPDYQLAPTLEEYSYLVG*PVLDKVPFTGFEPIPKAATIADALHLETSLIKAKLTI 180

Query: 129 KDGLPCLPYNFLHQKATTCFEKSKTDDFESILALLIYGIVLFPKVDKFVDMNAIRIFLTQ 188
           K  LP LP  FL+Q+A+   +    D F SILALLIYG+VLFP VD +VD++AI++FLT+
Sbjct: 181 KGNLPSLPTKFLYQQASDFAKVDNVDAFYSILALLIYGLVLFPNVDNYVDIHAIQMFLTK 360

Query: 189 NPVPVLLADTYVAIHDRTSHGKGTIVCCTPL 219
           NPVP LLAD Y +IHDR   G+G I+ C PL
Sbjct: 361 NPVPTLLADMYHSIHDRNQVGRGAILGCAPL 453


>AL366606 
          Length = 393

 Score = 72.8 bits (177), Expect = 2e-13
 Identities = 34/57 (59%), Positives = 43/57 (74%)
 Frame = -1

Query: 158 SILALLIYGIVLFPKVDKFVDMNAIRIFLTQNPVPVLLADTYVAIHDRTSHGKGTIV 214
           +I   L  G++LFP +D FVDMNAI +F ++NPVP LLADTY AIHDRT  G+G I+
Sbjct: 381 AIXLCLSTGLILFPNLDNFVDMNAIEVFHSKNPVPTLLADTYHAIHDRTLKGRGYIL 211


>TC79177 
          Length = 1704

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 179 MNAIRIFLTQNPVPVLLADTYVAI-HDRTSHGKGTIVCCTPLLHRWI 224
           +N +R+ +T N   +LL   Y +I  +RTS   GT +C   ++  WI
Sbjct: 819 VNHMRMLVTVNHKRMLLTVNY*SILTNRTSIAAGTCICPAMMIGTWI 959


>TC93873 similar to SP|P57703|METE_PSEAE
           5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase (EC 2.1.1.14), partial (14%)
          Length = 517

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 227 HLPRPSIRPEPIPWSQKLMTWTPKDIIWFNPSC 259
           H PR   + E     Q+++ +  K++IW NP C
Sbjct: 206 HSPRVPSKEELKARLQEILKYISKNLIWVNPDC 304


>TC85544 homologue to GP|6984142|gb|AAF34771.1| 40S ribosomal protein S11
           {Euphorbia esula}, partial (76%)
          Length = 1335

 Score = 27.3 bits (59), Expect = 8.2
 Identities = 15/46 (32%), Positives = 24/46 (51%), Gaps = 2/46 (4%)
 Frame = -2

Query: 108 IPTIAK--ALHLEVADIKDKFTTKDGLPCLPYNFLHQKATTCFEKS 151
           +P++A    L+    D+K++F    GL  LP  F H+    CF K+
Sbjct: 173 VPSMASLGVLNPRPTDLKNRFPPFPGLFPLPLFFEHRNTLGCFRKA 36


>TC85541 homologue to GP|166867|gb|AAA32866.1|| ribosomal protein S11
           (probable start codon at bp 67) {Arabidopsis thaliana},
           partial (87%)
          Length = 883

 Score = 27.3 bits (59), Expect = 8.2
 Identities = 15/46 (32%), Positives = 24/46 (51%), Gaps = 2/46 (4%)
 Frame = -1

Query: 108 IPTIAK--ALHLEVADIKDKFTTKDGLPCLPYNFLHQKATTCFEKS 151
           +P++A    L+    D+K++F    GL  LP  F H+    CF K+
Sbjct: 268 VPSMASLGVLNPRPTDLKNRFPPFPGLFPLPLFFEHRNTLGCFRKA 131


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.324    0.144    0.458 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,709,183
Number of Sequences: 36976
Number of extensions: 201338
Number of successful extensions: 929
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of query: 324
length of database: 9,014,727
effective HSP length: 96
effective length of query: 228
effective length of database: 5,465,031
effective search space: 1246027068
effective search space used: 1246027068
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)