BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC134322.1 + phase: 0 /pseudo
(413 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AW980456 107 1e-23
TC83226 weakly similar to PIR|G86419|G86419 probable reverse tra... 101 6e-22
TC93720 similar to GP|21743320|dbj|BAC03314. putative nematode r... 82 3e-16
BG585866 82 4e-16
BG587113 weakly similar to PIR|A84888|A8 hypothetical protein At... 79 3e-15
BQ149324 45 1e-09
BG586862 60 2e-09
TC93101 59 3e-09
AL382240 59 3e-09
TC80819 weakly similar to GP|10140689|gb|AAG13524.1 putative non... 45 2e-08
BG585499 56 3e-08
BG646730 54 1e-07
BG647708 weakly similar to GP|13786450|gb| putative reverse tran... 49 1e-07
TC79628 similar to GP|17104799|gb|AAL34288.1 putative 2-nitropro... 52 4e-07
TC89958 similar to GP|12483623|dbj|BAB21445. NADH dehydrogenase ... 48 8e-06
BF646462 47 1e-05
BG582129 32 7e-05
CA919100 homologue to PIR|G90291|G902 endoglucanase precursor [i... 42 4e-04
AW694838 40 0.001
CA921455 40 0.002
>AW980456
Length = 779
Score = 107 bits (266), Expect = 1e-23
Identities = 50/83 (60%), Positives = 60/83 (72%)
Frame = -2
Query: 78 AEAILHTPLYDQVTNDCLVWKAERNGCYSVRSAYRLYVEELIDVSHLRRPGNWQHIWYLK 137
A+ I+ TPL D L+WK E++G Y V+SAYR VEEL D S+L RPGNW IW LK
Sbjct: 253 ADKIMSTPLISHA*LDRLIWKDEKHGKYYVKSAYRFCVEELFDSSYLHRPGNWSGIWKLK 74
Query: 138 VSPKVKNLLWCMCRGCLPT*VRL 160
V PKV+NL+W MCRGCLPT +RL
Sbjct: 73 VPPKVQNLVWRMCRGCLPTRIRL 5
>TC83226 weakly similar to PIR|G86419|G86419 probable reverse transcriptase
100033-105622 [imported] - Arabidopsis thaliana, partial
(2%)
Length = 885
Score = 101 bits (251), Expect = 6e-22
Identities = 80/316 (25%), Positives = 132/316 (41%), Gaps = 5/316 (1%)
Frame = +3
Query: 96 VWKAERNGCYSVRSAYR-LYVEELIDVSHLRRPGN----WQHIWYLKVSPKVKNLLWCMC 150
+W G YSV+S Y L + +++ + W+ IW L P+ K LLW +
Sbjct: 3 MWMHNPTGIYSVKSGYNTLRTWQTQQINNTSTSSDETLIWKKIWSLHTIPRHKVLLWRIL 182
Query: 151 RGCLPT*VRLQDKGVSCPTNCESCGADHEDLNHLLFECPFSIHVWNSAGIWHDVQHAAIH 210
LP L+ +G+ C C C + E + HL CP S VW + + + +
Sbjct: 183 NDSLPVRSSLRKRGIQCYPLCPRCHSKTETITHLFMSCPLSKRVWFGSNLC--INFDNLP 356
Query: 211 SDSAANTIFSILQNLSRNIKQRFAATCWSLWKHRNLKIWENVDENSVQVVDRARNLIADW 270
+ + N ++ + I AA ++LW RNL + E+ + ++ RA N I+D+
Sbjct: 357 NPNFIN*LYEAIL*KDECITI*IAAIIYNLWHARNLSVLEDQTILEMDIIQRASNCISDY 536
Query: 271 EEAITLQPATFLQEDVQQQ*PAVPLQLHAQHQQSAVPLQAHAHHHNRPAGHGNLKWTPPS 330
++A T P + + + +QH RPA N KW P+
Sbjct: 537 KQANTQAPPSMARTGYDPR---------SQH---------------RPA--KNTKWKRPN 638
Query: 331 SGRFKCNVDAAFSAQFQRTGIGVCIRDDS*TFVLAKVLQFDQLFPVAIGEALGLYHAMQW 390
G K N DA + G+G+ IRD+ + A + D EA L M++
Sbjct: 639 LGLVKVNTDANLQ-NHGKWGLGIIIRDEVGLVMAASTWETDGNDRALEAEAYALLTGMRF 815
Query: 391 MQDMYFDNIDFELDSK 406
+D F + FE D++
Sbjct: 816 AKDCGFXKVXFEGDNE 863
>TC93720 similar to GP|21743320|dbj|BAC03314. putative nematode
resistance-like protein {Oryza sativa (japonica
cultivar-group)}, partial (3%)
Length = 457
Score = 82.4 bits (202), Expect = 3e-16
Identities = 49/172 (28%), Positives = 79/172 (45%)
Frame = -2
Query: 218 IFSILQNLSRNIKQRFAATCWSLWKHRNLKIWENVDENSVQVVDRARNLIADWEEAITLQ 277
IF++LQ S + + A WSLWK +K+W+ +E++ QVV A +L+ DW A T+
Sbjct: 438 IFTLLQQFSSDQCELMATVMWSLWKSCRMKLWQQNNESNSQVVHHATHLLNDWRAAQTI* 259
Query: 278 PATFLQEDVQQQ*PAVPLQLHAQHQQSAVPLQAHAHHHNRPAGHGNLKWTPPSSGRFKCN 337
H Q + V + P W + +KCN
Sbjct: 258 S-------------------HNHDQSNMV--------YPCPMKQDEEAWMTLTPDMYKCN 160
Query: 338 VDAAFSAQFQRTGIGVCIRDDS*TFVLAKVLQFDQLFPVAIGEALGLYHAMQ 389
+DA+F + G+G+C+ DD+ FVLAK + F + GEA+ L+ ++
Sbjct: 159 IDASFFTSLNKVGLGMCLADDADDFVLAKTIWFAPSCDIDAGEAVRLHTTLE 4
>BG585866
Length = 828
Score = 82.0 bits (201), Expect = 4e-16
Identities = 55/202 (27%), Positives = 89/202 (43%), Gaps = 5/202 (2%)
Frame = +3
Query: 3 ILRSRFIVRGGARWSIGSGATIPILDTPWLANGESIN--GNIPGGSYIHDF--TVQNLLS 58
I+R + +++ G W GSG + + W N S+ G IHD TV+++ +
Sbjct: 84 IIRDKNVLKSGYTWRAGSGNS-----SFWYTNWSSLGLLGTQAPFVDIHDLHLTVKDVFT 248
Query: 59 QHGKSWNEPLVQQMFSNDIAEAILHTPL-YDQVTNDCLVWKAERNGCYSVRSAYRLYVEE 117
G+ + + DIAE I +T L ++ D +W NG Y+ +S Y + +
Sbjct: 249 TGGQHTQS--LYTILPTDIAEVINNTHLNFNASIGDAYIWPHNSNGVYTAKSGYSWILSQ 422
Query: 118 LIDVSHLRRPGNWQHIWYLKVSPKVKNLLWCMCRGCLPT*VRLQDKGVSCPTNCESCGAD 177
V++ +W IW LK+ K K LW C +PT L + + C CG
Sbjct: 423 TETVNY--NNSSWSWIWRLKIPEKYKFFLWLACHNAVPTLSLLNHRNMVNSAICSRCGEH 596
Query: 178 HEDLNHLLFECPFSIHVWNSAG 199
E H + +C FS +W+ G
Sbjct: 597 EESFFHCVRDCRFSKIIWHKIG 662
>BG587113 weakly similar to PIR|A84888|A8 hypothetical protein At2g45230
[imported] - Arabidopsis thaliana, partial (10%)
Length = 767
Score = 79.0 bits (193), Expect = 3e-15
Identities = 57/233 (24%), Positives = 101/233 (42%), Gaps = 23/233 (9%)
Frame = -3
Query: 1 RSILRSRFIVRGGARWSIGSGATIPILDTPWLANGESINGNIPGGSYIHDFTVQNLLSQH 60
RSI ++ +++ GA+ IG+G I + + N P + L
Sbjct: 723 RSIHSAQHLIKQGAKVIIGNGENTNIWEREMAWKLTCVT-NHPNKHSSRAY*APTLYGYE 547
Query: 61 GKSWNEP--------LVQQMFSNDIAEAILHTPLYDQVTNDCLVWKAERNGCYSVRSAYR 112
G ++P L+ +F IL + D W+ ++G YSV+S Y
Sbjct: 546 GCRSDDPMRRERNANLINSIFPEGTRRKILSIHPQGPIGEDSYSWEYSKSGHYSVKSGY- 370
Query: 113 LYVEELIDVSHLRR--------PGNWQHIWYLKVSPKVKNLLWCMCRGCLPT*VRLQDKG 164
YV+ I + +R +Q +W SPKV++ LW LPT ++ +
Sbjct: 369 -YVQTNIIAAANQRGTVDQPSLDDLYQRVWKYNTSPKVRHFLWRCISNSLPTAANMRSRH 193
Query: 165 VSCPTNCESCGADHEDLNHLLFECPFSIHVWNSA-------GIWHDVQHAAIH 210
+S +C CG + E +NH+LF+CP++ +W ++ GI +D ++ +H
Sbjct: 192 ISKDGSCSRCGMESETVNHILFQCPYARLIWATSPIHAPPYGIMYDSLYSNLH 34
>BQ149324
Length = 374
Score = 45.4 bits (106), Expect(2) = 1e-09
Identities = 21/68 (30%), Positives = 32/68 (46%)
Frame = +1
Query: 183 HLLFECPFSIHVWNSAGIWHDVQHAAIHSDSAANTIFSILQNLSRNIKQRFAATCWSLWK 242
HL+F+C S++VW+ + + N IF L +LS F WS+ K
Sbjct: 91 HLIFQCSSSLNVWSMLPFLSTISILLQQDMDSKNIIFKALHDLSNEDAALFCCVLWSI*K 270
Query: 243 HRNLKIWE 250
RN K+W+
Sbjct: 271 QRNNKVWK 294
Score = 34.7 bits (78), Expect(2) = 1e-09
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 154 LPT*VRLQDKGVSCPTNCESCGADHED 180
LPT VRL+DK V+CP +C C ED
Sbjct: 3 LPTRVRLKDKRVTCPMDCTLCTVGSED 83
>BG586862
Length = 804
Score = 60.1 bits (144), Expect = 2e-09
Identities = 37/143 (25%), Positives = 64/143 (43%)
Frame = -1
Query: 131 QHIWYLKVSPKVKNLLWCMCRGCLPT*VRLQDKGVSCPTNCESCGADHEDLNHLLFECPF 190
+ +W +K P+ K+ LW + LP L +G+ C C C + E + HL C
Sbjct: 660 EKVWGIKTIPRHKSFLWRLLHNALPVKDELHKRGIRCSLLCPRCESKIETVQHLFLNCEV 481
Query: 191 SIHVWNSAGIWHDVQHAAIHSDSAANTIFSILQNLSRNIKQRFAATCWSLWKHRNLKIWE 250
+ W + + + + + T F IL+N I A +S+W RN K++E
Sbjct: 480 TQKEWFGSQLGINFHSSGVLHFHDWITNF-ILKNDEETI-IALTALLYSIWHARNQKVFE 307
Query: 251 NVDENSVQVVDRARNLIADWEEA 273
N+D V+ RA + + ++ A
Sbjct: 306 NIDVPGDVVIQRASSSLHSFKMA 238
>TC93101
Length = 675
Score = 59.3 bits (142), Expect = 3e-09
Identities = 49/204 (24%), Positives = 87/204 (42%)
Frame = -1
Query: 154 LPT*VRLQDKGVSCPTNCESCGADHEDLNHLLFECPFSIHVWNSAGIWHDVQHAAIHSDS 213
LP L +GV+CP C C + E NH+ C + VW + + ++ + +
Sbjct: 663 LPVRXELNKRGVNCPPLCPRCYFNLETTNHIFMSCERTQRVWFGSQL--SIRFPDNSTIN 490
Query: 214 AANTIFSILQNLSRNIKQRFAATCWSLWKHRNLKIWENVDENSVQVVDRARNLIADWEEA 273
++ +F + N + I + +A +S+W RN I+EN + ++ A+N I +E+A
Sbjct: 489 FSDWLFDAISNQTEEIIIKISAITYSIWHARNKAIFENQFVSEDTIIQ*AQNSILAYEQA 310
Query: 274 ITLQPATFLQEDVQQQ*PAVPLQLHAQHQQSAVPLQAHAHHHNRPAGHGNLKWTPPSSGR 333
T++P Q P + L + + + R + +W P +
Sbjct: 309 -TIKP----------QNPNIVLSSLSATSNT---------NTTRRRSNVRSRWQKPLNNI 190
Query: 334 FKCNVDAAFSAQFQRTGIGVCIRD 357
K N DA Q R G+G IR+
Sbjct: 189 LKANCDANLQVQ-GRWGLGCIIRN 121
>AL382240
Length = 320
Score = 58.9 bits (141), Expect = 3e-09
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +3
Query: 326 WTPPSSGRFKCNVDAAFSAQFQRTGIGVCIRDDS*TFVLAKVLQFDQLFPVAIGEALGLY 385
W P+ G +KCN+DA+FS F G+G+C+RD+ FVLA+ F L + +G L +Y
Sbjct: 129 WKKPAPGXYKCNIDASFSTSFNIVGLGMCLRDEDDAFVLARTEWFAPLCDIDVGGGLLVY 308
>TC80819 weakly similar to GP|10140689|gb|AAG13524.1 putative non-LTR
retroelement reverse transcriptase {Oryza sativa
(japonica cultivar-group)}, partial (2%)
Length = 1262
Score = 45.1 bits (105), Expect(2) = 2e-08
Identities = 34/118 (28%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Frame = +2
Query: 86 LYDQVTNDCLVWKAERNGCYSVRSAYRLYVEELIDVSHLRRPGNWQHIWYLKVSPKVKNL 145
L D V ND W + YSV+ YR + H+ +W+ + KV
Sbjct: 500 LQDNV-NDKWRWLLDPVNGYSVKVFYRY----ITSTGHISDRSLVDDVWHKHIPSKVSLF 664
Query: 146 LWCMCRGCLPT*VRLQDKGVSCPTNCES-CG-ADHEDLNHLLFECPFSIHVWNSAGIW 201
+W + R LPT L +GV TN CG D E HL C +W+ W
Sbjct: 665 VWRLLRNRLPTKDNLVHRGVLLATNAACVCGCVDSESTTHLFLHCNVFCSLWSLVRNW 838
Score = 31.2 bits (69), Expect(2) = 2e-08
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 214 AANTIFSILQN--LSRNIKQRFAATCWSLWKHRNLKIWENVDENSVQVVDRAR 264
A+NT +S+ QN +++ W +WK RN ++++N ++DR +
Sbjct: 868 ASNTFYSVCQNGWHAKSFSFILQVNFWVIWKERNNRLFQNTVTAPFVLIDRIK 1026
>BG585499
Length = 792
Score = 55.8 bits (133), Expect = 3e-08
Identities = 36/153 (23%), Positives = 63/153 (40%), Gaps = 7/153 (4%)
Frame = +3
Query: 105 YSVRSAYRLYV--EELIDVSHLRRPGNWQHIWYLKVSPKVKNLLWCMCRGCLPT*VRLQD 162
+ ++S+Y L V + ++D +W+ +W + + + +W + GC+ T R
Sbjct: 165 FKIKSSYNLLV*DQSIVDC-------DWKMLWGWRGPHRTQTFMWLVAHGCILTNYRRSR 323
Query: 163 KGVSCPTNCESCGADHEDLNHLLFECPFSIHVWNSAGIWHDVQHAAIHSDSAANTIFSIL 222
G C CG E + H+L +C + VW + D D + +F L
Sbjct: 324 WGTRVLATCPCCGNADETVLHVLCDCRPASQVWIRL-VPSDWITNFFSFDDCRDWVFKNL 500
Query: 223 QNLSRNIKQ-----RFAATCWSLWKHRNLKIWE 250
S + + F TCW +W RN I+E
Sbjct: 501 SKRSNGVSKFKWQPTFMTTCWHMWTWRNKAIFE 599
>BG646730
Length = 799
Score = 53.9 bits (128), Expect = 1e-07
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = +1
Query: 1 RSILRSRFIVRGGARWSIGSGATIPILDTPWLANGESINGNIPGGSYIHDFTVQNLLSQH 60
RS+ + ++ G+RWSI +G + I WL N P + + L+ +
Sbjct: 412 RSMFNIKDVIDLGSRWSISNGQNVRIWKDDWLPNQTGFKVCSPMVDFEEATCISELIDTN 591
Query: 61 GKSWNEPLVQQMFSNDIAEAILHTPLYDQVTND--CLVWKAERNGCYSVRSAYRL 113
KS LV+ +FS A+ IL+ PL ++ D L W+ +RN YSVRSA+ L
Sbjct: 592 TKSSKRDLVRNVFSAFEAKQILNIPLSWRLWPDRRILYWERDRN--YSVRSAHHL 750
>BG647708 weakly similar to GP|13786450|gb| putative reverse transcriptase
{Oryza sativa}, partial (9%)
Length = 708
Score = 49.3 bits (116), Expect(2) = 1e-07
Identities = 27/87 (31%), Positives = 41/87 (47%)
Frame = +3
Query: 31 WLANGESINGNIPGGSYIHDFTVQNLLSQHGKSWNEPLVQQMFSNDIAEAILHTPLYDQV 90
W+ + N GS +V L+ K WN L+ F+N A I+ PL +
Sbjct: 348 WIPSKREFKLNHVSGS----LSVDELIDYDTKQWNRDLIFHSFNNYAAHQIIKIPLSMRQ 515
Query: 91 TNDCLVWKAERNGCYSVRSAYRLYVEE 117
D ++W E++G YSVRSA+ +E
Sbjct: 516 PEDKIIWHWEKDGIYSVRSAHHALCDE 596
Score = 23.9 bits (50), Expect(2) = 1e-07
Identities = 9/21 (42%), Positives = 11/21 (51%)
Frame = +2
Query: 127 PGNWQHIWYLKVSPKVKNLLW 147
P W+ IW S V+N LW
Sbjct: 635 PVIWKAIWNTPASRSVQNFLW 697
>TC79628 similar to GP|17104799|gb|AAL34288.1 putative 2-nitropropane
dioxygenase {Arabidopsis thaliana}, partial (97%)
Length = 1560
Score = 52.0 bits (123), Expect = 4e-07
Identities = 27/58 (46%), Positives = 36/58 (61%)
Frame = +1
Query: 353 VCIRDDS*TFVLAKVLQFDQLFPVAIGEALGLYHAMQWMQDMYFDNIDFELDSKITRD 410
+CI D + +VL + F L V I +ALGL A+QW+ D+ DNIDF LDSK+ D
Sbjct: 1162 MCI*DATGGYVLGRTTWFAPLCSVDIDKALGLRDALQWVADLGMDNIDFSLDSKLVVD 1335
>TC89958 similar to GP|12483623|dbj|BAB21445. NADH dehydrogenase subunit 4L
{Gonostoma gracile}, partial (17%)
Length = 1040
Score = 47.8 bits (112), Expect = 8e-06
Identities = 38/141 (26%), Positives = 58/141 (40%), Gaps = 2/141 (1%)
Frame = +2
Query: 221 ILQNLSRNIKQRFAATCWSLWKHRNLKIWENVDENSVQVVDRARN-LIADWEEAITLQPA 279
+L L ++ + A W + K RN K+W V E + Q+V ARN + W ++Q
Sbjct: 314 VLVELLLDLLRLLATISWRIKKMRNRKLW*GV*ETTDQIVQCARNQYMQSWLYVNSVQTT 493
Query: 280 TFLQ-EDVQQQ*PAVPLQLHAQHQQSAVPLQAHAHHHNRPAGHGNLKWTPPSSGRFKCNV 338
+ E VQQQ A + + W PPS G KCN+
Sbjct: 494 NVVAPEQVQQQTSAAVM----------------------------VPWEPPS*GYVKCNM 589
Query: 339 DAAFSAQFQRTGIGVCIRDDS 359
DAA ++ G G + D++
Sbjct: 590 DAALFKEYNCVGAGFRV*DET 652
>BF646462
Length = 487
Score = 47.4 bits (111), Expect = 1e-05
Identities = 21/39 (53%), Positives = 25/39 (63%)
Frame = -1
Query: 332 GRFKCNVDAAFSAQFQRTGIGVCIRDDS*TFVLAKVLQF 370
GR KCN+D AF TGI CIRD+ TF LAK++ F
Sbjct: 355 GRVKCNIDXAFFEH*NNTGISFCIRDEEGTFXLAKIMPF 239
>BG582129
Length = 534
Score = 32.3 bits (72), Expect(2) = 7e-05
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2
Query: 346 FQRTGIGVCIRDDS*TFVLAKVLQ 369
F + GIGVCIRDD FV A+ L+
Sbjct: 206 FNKVGIGVCIRDDEGRFVSARTLR 135
Score = 31.6 bits (70), Expect(2) = 7e-05
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3
Query: 326 WTPPSSGRFKCNVDAAFSA 344
W PP GR K NVDA+FSA
Sbjct: 265 WQPPPVGRLKYNVDASFSA 209
Score = 28.1 bits (61), Expect = 6.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 233 FAATCWSLWKHRNLK 247
FA W +WKHRNL+
Sbjct: 495 FATILWRIWKHRNLR 451
>CA919100 homologue to PIR|G90291|G902 endoglucanase precursor [imported] -
Sulfolobus solfataricus, partial (3%)
Length = 789
Score = 42.0 bits (97), Expect = 4e-04
Identities = 41/158 (25%), Positives = 59/158 (36%), Gaps = 17/158 (10%)
Frame = -2
Query: 133 IWYLKVSPKVKNLLWCMCRGCLPT*VRLQDKGVSCPTNC----ESCGADHEDLNHLLFEC 188
IW+ +V KV W + R LPT L +GV PT CGA E HL C
Sbjct: 584 IWHRQVPLKVSVFAWRLLRDRLPTKSNLIYRGV-IPTEAGLCVSGCGA-LESAQHLFLSC 411
Query: 189 PFSIHVWNSAGIW-------------HDVQHAAIHSDSAANTIFSILQNLSRNIKQRFAA 235
+ +W+ W H VQ +HS S LQ + +
Sbjct: 410 SYFASLWSLVRDWIGFVGVDTNVLSDHFVQF--VHSTGGNKASQSFLQLI-------WLL 258
Query: 236 TCWSLWKHRNLKIWENVDENSVQVVDRARNLIADWEEA 273
W LW RN + + +++D+ + L W +A
Sbjct: 257 CAWVLWTERNNMCFNDSITPLPRLLDKVKYLSLGWLKA 144
>AW694838
Length = 421
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/39 (48%), Positives = 25/39 (63%)
Frame = +3
Query: 373 LFPVAIGEALGLYHAMQWMQDMYFDNIDFELDSKITRDA 411
L V GEAL L +A++W QD N++FE+D KI DA
Sbjct: 111 LIMVQEGEALKLMYALKWAQDHNLQNVEFEIDFKILTDA 227
>CA921455
Length = 713
Score = 40.0 bits (92), Expect = 0.002
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = -3
Query: 237 CWSLWKHRNLKIWENVDENSVQVVDRARNLIADWEEA 273
C SLW+ RN K+WE++ E + V+ RA+ + + W+ A
Sbjct: 654 CGSLWRRRNTKLWESILEQCLHVMARAKEVFSLWQFA 544
Score = 34.7 bits (78), Expect = 0.069
Identities = 18/62 (29%), Positives = 31/62 (49%)
Frame = -1
Query: 336 CNVDAAFSAQFQRTGIGVCIRDDS*TFVLAKVLQFDQLFPVAIGEALGLYHAMQWMQDMY 395
CN+D A + ++ + VC+RD * F + + A GEA GL A+ W+ ++
Sbjct: 464 CNLDVAIFSTMKKVSMTVCLRDVE*HFKKTYNIWCTCVMSAAEGEA*GLNQAIDWLIPLH 285
Query: 396 FD 397
+
Sbjct: 284 LN 279
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.326 0.138 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,131,235
Number of Sequences: 36976
Number of extensions: 270870
Number of successful extensions: 2150
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 2107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2135
length of query: 413
length of database: 9,014,727
effective HSP length: 99
effective length of query: 314
effective length of database: 5,354,103
effective search space: 1681188342
effective search space used: 1681188342
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC134322.1