Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC133864.7 - phase: 0 
         (563 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC87110 similar to PIR|T02405|T02405 Nicotiana tabacum axi1 prot...   379  e-105
TC87111 similar to PIR|T02405|T02405 Nicotiana tabacum axi1 prot...   250  9e-67
TC89217 similar to PIR|E84799|E84799 similar to axi 1 protein fr...   197  1e-50
TC82843 similar to PIR|A44226|A44226 auxin-independent growth pr...   189  2e-48
CB895020 similar to PIR|G86357|G86 Similar to auxin-independent ...   168  6e-42
TC83237 similar to GP|17065372|gb|AAL32840.1 Similar to auxin-in...   167  1e-41
CB893607 similar to PIR|E84799|E84 similar to axi 1 protein from...   117  3e-37
TC81913 similar to GP|14517444|gb|AAK62612.1 AT5g35570/K2K18_1 {...   140  1e-33
TC89187 similar to GP|22267609|gb|AAM94943.1 growth regulator-re...   123  2e-28
AW689665 similar to PIR|C84425|C84 similar to axi 1 protein from...   116  3e-26
BI308901 similar to PIR|C84425|C84 similar to axi 1 protein from...   115  6e-26
TC91919 similar to PIR|C84425|C84425 similar to axi 1 protein fr...   111  6e-25
TC78479 homologue to PIR|T06805|T06805 RT17-1 protein homolog - ...   100  4e-24
TC80247 similar to PIR|C86476|C86476 protein F15O4.45 [imported]...   107  9e-24
TC90613 similar to GP|6006861|gb|AAF00637.1| putative auxin-inde...   103  2e-22
AJ388792 similar to PIR|T51403|T51 hypothetical protein F14F8_12...    97  2e-20
TC78478 similar to PIR|T06805|T06805 RT17-1 protein homolog - ga...    91  9e-19
TC83319 similar to PIR|G86357|G86357 Similar to auxin-independen...    80  2e-15
TC89607 similar to GP|20856498|gb|AAM26669.1 AT4g16650/dl4350w {...    79  4e-15
BF639405 similar to GP|7940275|gb| F24O1.5 {Arabidopsis thaliana...    75  9e-14

>TC87110 similar to PIR|T02405|T02405 Nicotiana tabacum axi1 protein homolog
           [imported] - Arabidopsis thaliana, partial (36%)
          Length = 857

 Score =  379 bits (972), Expect = e-105
 Identities = 179/216 (82%), Positives = 194/216 (88%)
 Frame = +3

Query: 348 VRTGCLPGLTPEYDEVINNERIQRPELLTARSNMTYHQRKMAGLCPLNVMEVMRLLKALG 407
           VRTGCLPGL+PE+DE++ NERIQRPELL  RSNMTYH+RKMAGLCPL  M+V RLLKALG
Sbjct: 3   VRTGCLPGLSPEFDEIVKNERIQRPELLKGRSNMTYHERKMAGLCPLTAMDVTRLLKALG 182

Query: 408 APKDARIYWAGGKPLGGKEALLPLIQEFPNFYNKEDLALPGELQPFVRKASLMAAIDYIV 467
           A KDARIYWAGG+PLGGKEAL PLI EFP+ YNKEDLALPGEL+PF +KASLMAAIDYIV
Sbjct: 183 AQKDARIYWAGGQPLGGKEALHPLIHEFPHLYNKEDLALPGELEPFAKKASLMAAIDYIV 362

Query: 468 SEKSDVFMPSHGGNMGRAIQGHRAFTGHKKYITPNKRHMLPYFLNSSLSEEEFNRIIKEL 527
           SEKSDVFMPSHGGNMG A+QGHRA+ GHKKYITPNKR M PYFLN SL E EFN I+KEL
Sbjct: 363 SEKSDVFMPSHGGNMGHALQGHRAYAGHKKYITPNKRQMHPYFLNPSLPEAEFNSIVKEL 542

Query: 528 HQDSLGQPELRTNKNGRDVTKYPVPECMCNDSHAQS 563
           HQ+SLGQPELRT+K GRDVTKYPVPECMCNDSH  S
Sbjct: 543 HQNSLGQPELRTSKVGRDVTKYPVPECMCNDSHNDS 650


>TC87111 similar to PIR|T02405|T02405 Nicotiana tabacum axi1 protein homolog
           [imported] - Arabidopsis thaliana, partial (20%)
          Length = 909

 Score =  250 bits (639), Expect = 9e-67
 Identities = 157/292 (53%), Positives = 187/292 (63%), Gaps = 60/292 (20%)
 Frame = +3

Query: 1   MAKSKNNAKKLSYISVPSQIINSISSSSLQSLID--SPKKSSKT----------TIFTRK 48
           MAKSKNNAKKLSYISVPSQIINSISSSS+QSL+D  +PKKSS            T +   
Sbjct: 33  MAKSKNNAKKLSYISVPSQIINSISSSSIQSLLDDQTPKKSSTKIASNFFFTTLTKWKNP 212

Query: 49  STLWFL-ALFLVGFFGMFKFGFNPDTPFPQKPCSTTLQKFSISNHH-SFSKLGF------ 100
           S L+FL  LF +G F +F  GFN  TPF + PC+T ++K  ISN   S S+L        
Sbjct: 213 SRLFFLFTLFFLGGFALFMIGFNLKTPFSKSPCATNVEKSLISNGFGSKSELKVVSMNKN 392

Query: 101 ----GSVLLQKE----RKTSLKND------------HNDEFLQHGSEF----LVSHVQLQ 136
               G VL++ E    +  S+ N             + DE L  GS      L+++V LQ
Sbjct: 393 EILNGGVLVKSELGVVQNPSISNGFDSKSELGVVSVNKDEVLNDGSLSNSLPLITNVMLQ 572

Query: 137 AKGSS----------------EFWKKPNGLGYKPCLSFSNDYRRQSERVLKDRRKYLMVV 180
           AK  S                EFWK+P+GLGYKPCL FS DYRR+S+ ++K+R++YLMVV
Sbjct: 573 AKVPSGVDLEDEEKGEGVEKGEFWKQPDGLGYKPCLDFSKDYRRESDGIVKNRKRYLMVV 752

Query: 181 VSGGMNQQRNQIVDAVVIARILGAALVVPVLQVNVIWGDESEFGDIFDLEHF 232
           VSGGMNQQRNQIVDAVVIARILGAALVVP+LQVNVIWGDESEF DIFD EHF
Sbjct: 753 VSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFADIFDFEHF 908


>TC89217 similar to PIR|E84799|E84799 similar to axi 1 protein from
           Nicotiana tabacum [imported] - Arabidopsis thaliana,
           partial (52%)
          Length = 1375

 Score =  197 bits (500), Expect = 1e-50
 Identities = 123/343 (35%), Positives = 182/343 (52%), Gaps = 5/343 (1%)
 Frame = +1

Query: 135 LQAKGSSEFWKKPNGLGYKPCLSFSNDYRRQSERVLKDRRK--YLMVVVSGGMNQQRNQI 192
           L+   + E W KPN   Y  C+S      R   R++K  +   YL+V  +GG+NQ R  I
Sbjct: 376 LERLATPEIWMKPNSDKYYQCVS------RPXNRMMKPSKTNGYLLVHANGGLNQMRTGI 537

Query: 193 VDAVVIARILGAALVVPVLQVNVIWGDESEFGDIFDLEHFKRVLANDVRVVSALPSTHIM 252
            D V +A+I+ A LV+P L  +  W D S+F DIFD   F +VL  D+ +V  LP  +  
Sbjct: 538 CDMVAVAKIMNATLVLPSLDHDSFWTDPSDFKDIFDWRLFMKVLKEDIDIVEYLPLQYAS 717

Query: 253 TRPVEGRPPLHATPSWIRARYLRRLNREGVLLLRGLDSRLSKD-LPSDLQKLRCKVAFNA 311
            +P+   P   +  S+ R+  L  L R  V+     DSRL+ + L S +QKLRC+  + A
Sbjct: 718 VKPIVKAPVSWSKASYYRSEILPMLKRHKVVQFTHTDSRLANNGLASSIQKLRCRANYQA 897

Query: 312 LRFAEPIEELGNKIADRMKSKG-PYLALHLRMEKDVWVRTGCLPGLTPEYDEVINNERIQ 370
           L++   IEELG  + DR+++   P++ALHLR EKD+   TGC   LT E  E +   R+ 
Sbjct: 898 LKYTVEIEELGKTLVDRLRNNDEPFIALHLRYEKDMLAFTGCNHNLTIEEAEEL---RVM 1068

Query: 371 RPELL-TARSNMTYHQRKMAGLCPLNVMEVMRLLKALGAPKDARIYWAGGKPLGGKEALL 429
           R E+       +    R++ G CP++  E    LKA+G P    IY   G P+ G  ++ 
Sbjct: 1069RYEVKHWKEKEIDSVDRRLQGGCPMSPREAAIFLKAMGYPATTTIYIVAG-PIYGGNSMA 1245

Query: 430 PLIQEFPNFYNKEDLALPGELQPFVRKASLMAAIDYIVSEKSD 472
               E+PN +    LA   EL+PF    + +AA+DYIV+ + D
Sbjct: 1246AFRAEYPNVFTHSTLATEEELEPFKPYQNRLAALDYIVALERD 1374


>TC82843 similar to PIR|A44226|A44226 auxin-independent growth promoter -
           common tobacco, partial (56%)
          Length = 1096

 Score =  189 bits (480), Expect = 2e-48
 Identities = 128/355 (36%), Positives = 194/355 (54%), Gaps = 13/355 (3%)
 Frame = +2

Query: 221 SEFGDIFDLEHFKRVLANDVRVVSALPSTHIMTRPVEGRPPLHATPSWIRAR-----YLR 275
           S F +IFD++ F   L+NDV+++  LPS+       +GR  L A    +  +     Y+ 
Sbjct: 5   SNFSEIFDVDWFASYLSNDVKIIKQLPSS-------KGRKALSAYSLRVPRKCSERCYIN 163

Query: 276 R----LNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFNALRFAEPIEELGNKIADRMKS 331
           R    L ++  + L   D RL+  L ++ QKLRC+V ++ALRF +PI ++G ++  RM+ 
Sbjct: 164 RILPVLVKKRAVQLNKFDYRLANKLDTEYQKLRCRVNYHALRFTDPILKMGQQLVQRMRM 343

Query: 332 -KGPYLALHLRMEKDVWVRTGC-LPGLTPEYDEVINNERIQRPELLTARSNMTYHQRKMA 389
            K  Y+ALHLR E D+   +GC   G   E+ E+     I+R      +SN    +R+  
Sbjct: 344 RKKHYIALHLRFEPDMLAFSGCDYGGGEKEHKEL---GAIRRRWKTLHKSNPDRARRQ-- 508

Query: 390 GLCPLNVMEVMRLLKALGAPKDARIYWAGGKPLGGKEALLPLIQEFPNFYNKEDLALPGE 449
           G CPL   EV  +L+ALG   D  IY A G+   G E L PL   FPNF++KE +A   E
Sbjct: 509 GRCPLTPEEVGLMLRALGYGSDVHIYVASGEVYRGDETLAPLKALFPNFHSKETIATKEE 688

Query: 450 LQPFVRKASLMAAIDYIVSEKSDVFMPSHGGNMGRAIQGHRAFTGHKKYITPNKRHMLPY 509
           L+PF   +S MAA+D+IV ++SDVF+ ++ GNM + + G R + GHK  I PN + +   
Sbjct: 689 LEPFSSFSSRMAALDFIVCDESDVFVTNNNGNMAKILAGRRRYFGHKPTIRPNAKKLYRL 868

Query: 510 FLNSSLSE-EEFNRIIKELHQDSLGQP-ELRTNKNGRDVTKYPVPECMCNDSHAQ 562
           FLN S S  + F   ++   +  +G+P E+R  + G          C+C DS A+
Sbjct: 869 FLNRSNSTWDVFASSVRTFQKGFMGEPKEVRPGRGGFHENP---STCICEDSVAK 1024


>CB895020 similar to PIR|G86357|G86 Similar to auxin-independent growth
           promoter [imported] - Arabidopsis thaliana, partial
           (44%)
          Length = 812

 Score =  168 bits (425), Expect = 6e-42
 Identities = 103/277 (37%), Positives = 146/277 (52%), Gaps = 12/277 (4%)
 Frame = +2

Query: 172 DRRKYLMVVVSGGMNQQRNQIVDAVVIARILGAALVVPVLQVNVIWGDESEFGDIFDLEH 231
           + R YL+V   GG+NQ R+ I D V +ARI+ A LV+P L     W D S F D+FD EH
Sbjct: 5   ESRGYLLVHTHGGLNQMRSGICDMVAVARIINATLVIPELDKRSFWQDTSNFSDVFDEEH 184

Query: 232 FKRVLANDVRVVSALPSTHIM---TRPVEGRPPLHATPSWIRARYLRRLNREGVLLLRGL 288
           F   LANDV+++  LP   +M   T  V+ +    +   +      R      V+     
Sbjct: 185 FINSLANDVKIIKKLPIELVMVNETGMVKQQFRSWSGMDYYENEIARLWEDHEVIRASKS 364

Query: 289 DSRL-SKDLPSDLQKLRCKVAFNALRFAEPIEELGNKIADRMKSKGPYLALHLRMEKDVW 347
           DSRL + +LP D+QKLRC+  + ALRF+  IE++G  + +RM+S+GPY+ALHLR EKD+ 
Sbjct: 365 DSRLANNNLPPDIQKLRCRACYEALRFSPRIEQIGKLLVERMRSRGPYIALHLRYEKDML 544

Query: 348 VRTGCLPGLTPEYDEVINNERIQRPELLTARSNMTYH--------QRKMAGLCPLNVMEV 399
             +GC   L+ +  E          EL   R N++Y         +++  G CPL   EV
Sbjct: 545 AFSGCTHDLSLDEAE----------ELRIIRENISYWKVKDIDPVEQRSKGFCPLTPKEV 694

Query: 400 MRLLKALGAPKDARIYWAGGKPLGGKEALLPLIQEFP 436
              L ALG P    IY A G+  GG+  +  L   +P
Sbjct: 695 GIFLTALGYPSKTPIYIAAGEIYGGESHMAELRSRYP 805


>TC83237 similar to GP|17065372|gb|AAL32840.1 Similar to auxin-independent
           growth promoter (axi 1) {Arabidopsis thaliana}, partial
           (60%)
          Length = 1188

 Score =  167 bits (423), Expect = 1e-41
 Identities = 95/280 (33%), Positives = 150/280 (52%), Gaps = 6/280 (2%)
 Frame = +2

Query: 142 EFWKKPNGLGYKPCLSFSNDYRRQSERVLKDRRKYLMVVVSGGMNQQRNQIVDAVVIARI 201
           E W   +  G++P  S  + +     +       YL V  +GG+NQQR  I +AV+ ARI
Sbjct: 338 ELWSNADSSGWRPSSSPRSHWPPPPSK----NNGYLRVRCNGGLNQQRTAISNAVLAARI 505

Query: 202 LGAALVVPVLQVNVIWGDESEFGDIFDLEHFKRVLANDVRVVSALPSTH-----IMTRPV 256
           + A LV+P L  N  W D+S F  I+D+EHF R L  DV++V ++P           +  
Sbjct: 506 MNATLVLPELDANSFWHDDSGFHGIYDVEHFIRTLRFDVKIVESIPENEKSGKKKKLKAF 685

Query: 257 EGRPPLHATPSWIRARYLRRLNREGVLLLRGLDSRLSKDLPS-DLQKLRCKVAFNALRFA 315
           + RPP  A  SW     L+++   G + L     RL++++ + + Q+LRC+V ++ALRF 
Sbjct: 686 QIRPPRDAPISWYTTDSLKKMKEHGAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFK 865

Query: 316 EPIEELGNKIADRMKSKGPYLALHLRMEKDVWVRTGCLPGLTPEYDEVINNERIQRPELL 375
             I +L   I D+++++GP++++HLR E D+    GC    TPE  +++   R    E  
Sbjct: 866 PHIMKLSQSIVDKLRAQGPFMSIHLRFEMDMLSFAGCFDIFTPEEQKILKKYR----EEN 1033

Query: 376 TARSNMTYHQRKMAGLCPLNVMEVMRLLKALGAPKDARIY 415
            A   + Y++R+  G CPL   EV  +L+ALG     RIY
Sbjct: 1034FAPKKLVYNERRAIGKCPLTPEEVGLILRALGFDNSTRIY 1153


>CB893607 similar to PIR|E84799|E84 similar to axi 1 protein from Nicotiana
           tabacum [imported] - Arabidopsis thaliana, partial (45%)
          Length = 943

 Score =  117 bits (292), Expect(2) = 3e-37
 Identities = 74/206 (35%), Positives = 108/206 (51%), Gaps = 3/206 (1%)
 Frame = +1

Query: 222 EFGDIFDLEHFKRVLANDVRVVSALPSTHIMTRPVEGRPPLHATPSWIRARYLRRLNREG 281
           +F DIFD   F +VL  D+ +V  LP  +   +P+   P   +  S+ R+  L  L R  
Sbjct: 319 DFKDIFDWRLFMKVLKEDIDIVEYLPLQYASVKPIVKAPVSWSKASYYRSEILPMLKRHK 498

Query: 282 VLLLRGLDSRLSKD-LPSDLQKLRCKVAFNALRFAEPIEELGNKIADRMKSKG-PYLALH 339
           V+     DSRL+ + L S +QKLRC+  + AL++   IEELG  + DR+++   P++ALH
Sbjct: 499 VVQFTHTDSRLANNGLASSIQKLRCRANYQALKYTVEIEELGKTLVDRLRNNDEPFIALH 678

Query: 340 LRMEKDVWVRTGCLPGLTPEYDEVINNERIQRPELL-TARSNMTYHQRKMAGLCPLNVME 398
           LR EKD+   TGC   LT E  E +   R+ R E+       +    R++ G CP++  E
Sbjct: 679 LRYEKDMLAFTGCNHNLTIEEAEEL---RVMRYEVKHWKEKEIDSVDRRLQGGCPMSPRE 849

Query: 399 VMRLLKALGAPKDARIYWAGGKPLGG 424
               LKA+G P    IY   G   GG
Sbjct: 850 AAIFLKAMGYPCTTTIYIVAGPIYGG 927



 Score = 57.0 bits (136), Expect(2) = 3e-37
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
 Frame = +3

Query: 135 LQAKGSSEFWKKPNGLGYKPCLSFSNDYRRQSERVLKDRRK--YLMVVVSGGMNQQRNQI 192
           L+   + E W KPN   Y  C+S      R   R++K  +   YL+V  +GG+NQ R  I
Sbjct: 42  LERLATPEIWMKPNSDKYYQCVS------RPRNRMMKPSKTNGYLLVHANGGLNQMRTGI 203

Query: 193 VDAVVIARILGAALVVPVLQVNVIWGD 219
            D V +A+I+ A LV+P L  +  W D
Sbjct: 204 CDMVAVAKIMNATLVLPSLDHDSFWTD 284


>TC81913 similar to GP|14517444|gb|AAK62612.1 AT5g35570/K2K18_1 {Arabidopsis
           thaliana}, partial (51%)
          Length = 1062

 Score =  140 bits (353), Expect = 1e-33
 Identities = 77/223 (34%), Positives = 119/223 (52%), Gaps = 2/223 (0%)
 Frame = +3

Query: 141 SEFWKKPNGLGYKPCLSFSNDYRRQSERVLKDRRKYLMVVVSGGMNQQRNQIVDAVVIAR 200
           SE W KPN   +  C+  S +++    +       Y++V  +GG+NQ R  I D V +A+
Sbjct: 48  SEVWSKPNSENFTQCIDLSRNHKMLDAKT----NGYILVNANGGLNQMRFGICDMVAVAK 215

Query: 201 ILGAALVVPVLQVNVIWGDESEFGDIFDLEHFKRVLANDVRVVSALPSTHIMTRPVEGRP 260
           I+ A LV+P L     W D+S F D+FD +HF   L +DV +V  LP T+    P    P
Sbjct: 216 IMKATLVLPSLDHTSYWADQSGFKDLFDWKHFIDTLKDDVHIVETLPPTYAEIHPFSKTP 395

Query: 261 PLHATPSWIRARYLRRLNREGVLLLRGLDSRLSKD-LPSDLQKLRCKVAFNALRFAEPIE 319
              +   + +   L  LN+  V+     DSRL+ + +P  +QKLRC+V + ALR++ P+E
Sbjct: 396 ISWSKVPYYKTEVLPLLNQHKVIYFTHTDSRLANNGIPKSIQKLRCRVNYRALRYSAPVE 575

Query: 320 ELGNKIADRMKSKG-PYLALHLRMEKDVWVRTGCLPGLTPEYD 361
           E GNK+  RM+  G PYLA   ++ +       C+  L  ++D
Sbjct: 576 EFGNKLVSRMQQNGNPYLAPSFKIREGY----ACIYWLQSQFD 692



 Score = 98.2 bits (243), Expect = 7e-21
 Identities = 57/147 (38%), Positives = 81/147 (54%)
 Frame = +1

Query: 336 LALHLRMEKDVWVRTGCLPGLTPEYDEVINNERIQRPELLTARSNMTYHQRKMAGLCPLN 395
           L LHLR EKD+   TGC   LT E DE +   R +         N T  +R++ G CPL 
Sbjct: 628 LPLHLRYEKDMLAFTGCSHSLTAEEDEELRQMRYEVGHWKEKEINGT--ERRLLGGCPLT 801

Query: 396 VMEVMRLLKALGAPKDARIYWAGGKPLGGKEALLPLIQEFPNFYNKEDLALPGELQPFVR 455
             E   LL+ALG P   RIY   G+  G + ++  L  +FPN ++   L+   EL PF  
Sbjct: 802 PRETSLLLRALGFPSHTRIYLVAGEAYG-RGSMKYLKDDFPNIFSHSSLSSEDELNPFKN 978

Query: 456 KASLMAAIDYIVSEKSDVFMPSHGGNM 482
             +++A IDY+V+ +SDVF+ ++ GNM
Sbjct: 979 HQNMLAGIDYVVALQSDVFLYTYDGNM 1059


>TC89187 similar to GP|22267609|gb|AAM94943.1 growth regulator-related
           protein {Arabidopsis thaliana}, partial (44%)
          Length = 1501

 Score =  123 bits (309), Expect = 2e-28
 Identities = 76/229 (33%), Positives = 119/229 (51%), Gaps = 8/229 (3%)
 Frame = +3

Query: 336 LALHLRMEKDVWVRTGCL--PGLTPEYDEVINNERIQRPELLTARSNMTYHQRKMAGLCP 393
           +A+HLR E+D+   + C+   G   + +     ER  R +       +     ++ G CP
Sbjct: 6   IAVHLRFEEDMVAFSCCIYDGGKAEKLEMDSARERGWRGKFKRKGRIVVPDLYRVNGKCP 185

Query: 394 LNVMEVMRLLKALGAPKDARIYWAGGKPLGGKEALLPLIQEFPNFYNKEDLALPGELQPF 453
           L  +EV  +L+ +G      IY A GK    ++ L PLI+ FPN Y KE LA   EL PF
Sbjct: 186 LTPLEVGMMLRGMGFNNSTSIYLASGKIYHAEKYLAPLIKMFPNLYTKESLATTDELAPF 365

Query: 454 VRKASLMAAIDYIVSEKSDVFMPSHGGNMGRAIQGHRAFT--GHKKYITPNKRHMLPYFL 511
           +  +S +AA+DY V   S+VF+ + GGN    + GHR F   GH K I P+KR ++  F 
Sbjct: 366 MGYSSQLAALDYTVCLFSEVFVTTQGGNFPHFLMGHRRFLYGGHAKTIIPDKRKLVVLFE 545

Query: 512 NSSLS----EEEFNRIIKELHQDSLGQPELRTNKNGRDVTKYPVPECMC 556
           N+++S    +++ + ++ E  +  +  P +R       V  YP+PEC C
Sbjct: 546 NTTISWSALKDQMDDMLSESDRKGIMVPRVRKINRKTSVYTYPLPECRC 692


>AW689665 similar to PIR|C84425|C84 similar to axi 1 protein from Nicotiana
           tabacum [imported] - Arabidopsis thaliana, partial (39%)
          Length = 675

 Score =  116 bits (290), Expect = 3e-26
 Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 8/200 (4%)
 Frame = +1

Query: 141 SEFWKKP-NGLGYKPCLSFSNDYRRQSERVLKDRRKYLMVVVSGGMNQQRNQIVDAVVIA 199
           S  W+ P  G  +KPC++       +S   L +   Y+ V  +GG+NQQR  + +AV +A
Sbjct: 76  STIWRSPYRGGEWKPCVN-------RSSEGLPESNGYIYVEANGGLNQQRTSVCNAVAVA 234

Query: 200 RILGAALVVPVLQVNVIWGDESEFGDIFDLEHFKRVLANDVRVVSALPSTHIMTRPVEGR 259
             L A LV+P    + IW D S+F DI+D E+F  +L NDVRVV  +P  ++M R     
Sbjct: 235 GYLNATLVIPNFHYHSIWKDPSKFRDIYDEEYFVDILKNDVRVVDKIPE-YLMERFGSNM 411

Query: 260 PPLH--ATPSWIRARYLR-----RLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFNAL 312
             +H     +W   +Y R     +L  E V+ +    +RLS D P  +Q+LRC   + AL
Sbjct: 412 TNVHNFRIKAWSSIQYYRDVVLPKLLEEKVIRISPFANRLSFDAPPVVQRLRCLANYEAL 591

Query: 313 RFAEPIEELGNKIADRMKSK 332
           RF+ PI  +G  + +RM+ +
Sbjct: 592 RFSSPILTIGESLVERMRER 651


>BI308901 similar to PIR|C84425|C84 similar to axi 1 protein from Nicotiana
           tabacum [imported] - Arabidopsis thaliana, partial (41%)
          Length = 725

 Score =  115 bits (287), Expect = 6e-26
 Identities = 80/233 (34%), Positives = 118/233 (50%), Gaps = 14/233 (6%)
 Frame = +3

Query: 176 YLMVVVSGGMNQQRNQIVDAVVIARILGAALVVPVLQVNVIWGDESEFGDIFDLEHFKRV 235
           Y+ V  +GG+NQQR  I +AV +A  L A LV+P    + IW D S+F DI+D E+F   
Sbjct: 18  YIYVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWKDPSKFSDIYDEEYFVNT 197

Query: 236 LANDVRVVSALPSTHI-------MTRPVEGRPPLHATPSWIRARYLRRLNREGVLLLRGL 288
           L NDV++V  +P  H+       MT     R    ++  + R   L +L  E V+ +   
Sbjct: 198 LKNDVQMVEKIPE-HLMERFGSNMTNVFNFRIKAMSSIQYYRDVVLPKLFEEQVIRISPF 374

Query: 289 DSRLSKDLPSDLQKLRCKVAFNALRFAEPIEELGNKIADRM-----KSKGPYLALHLRME 343
            +RLS D P  +Q+LRC   + ALRF+ PI  L   +  RM     K+ G Y+++HLR E
Sbjct: 375 ANRLSYDAPPAVQRLRCLANYEALRFSSPILTLAESLIARMRKQSIKNGGKYVSIHLRFE 554

Query: 344 KDVWVRTGCL-PGLTPEYDEVI-NNERIQRPELLTARSNMTYHQRKMAGLCPL 394
           +D+   + C+  G   E D++I   ER  +  L          Q +  G  PL
Sbjct: 555 EDMVAFSCCVFDGGKEERDDMIAARERGWKGNLQNVDELYVQEQSRSMGSVPL 713


>TC91919 similar to PIR|C84425|C84425 similar to axi 1 protein from
           Nicotiana tabacum [imported] - Arabidopsis thaliana,
           partial (31%)
          Length = 1210

 Score =  111 bits (278), Expect = 6e-25
 Identities = 65/174 (37%), Positives = 93/174 (53%), Gaps = 4/174 (2%)
 Frame = +2

Query: 387 KMAGLCPLNVMEVMRLLKALGAPKDARIYWAGGKPLGGKEALLPLIQEFPNFYNKEDLAL 446
           ++ G CPL  +EV  +L+ +G  K+  I+ A G     ++ + PL+Q FPN + KE LA 
Sbjct: 14  RINGKCPLTPLEVGLMLRGMGFTKNTSIFLASGIIYNAEKTMAPLLQMFPNLHTKETLAS 193

Query: 447 PGELQPFVRKASLMAAIDYIVSEKSDVFMPSHGGNMGRAIQGHRAFT--GHKKYITPNKR 504
             EL  F   +S MAAIDY V   S+VF+ + GGN    + GHR +   GH K I P+KR
Sbjct: 194 EEELSTFRNYSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLLGHRRYLYGGHSKTIKPDKR 373

Query: 505 HMLPYFLNSSLSEEEFNRIIKEL--HQDSLGQPELRTNKNGRDVTKYPVPECMC 556
            +   F N ++    F R +  +  H DS G    R N +   +  +P PECMC
Sbjct: 374 KLALLFDNPNIGWRSFKRQLLNMRSHSDSKGVELKRPNDS---IYSFPCPECMC 526


>TC78479 homologue to PIR|T06805|T06805 RT17-1 protein homolog - garden pea,
           partial (60%)
          Length = 789

 Score =  100 bits (248), Expect(3) = 4e-24
 Identities = 58/149 (38%), Positives = 81/149 (53%), Gaps = 11/149 (7%)
 Frame = +3

Query: 194 DAVVIARILGAALVVPVLQVNVIWGDESEFGDIFDLEHFKRVLANDVRVVSALPSTH--- 250
           D V +A+IL A LV+P L++N +W D S F DIFD++HF  VL +DV +V  LP  +   
Sbjct: 69  DGVAVAKILNATLVIPYLELNPVWKDSSSFEDIFDVDHFIDVLKDDVSIVKELPEEYSWS 248

Query: 251 ------IMTRPVEGR-PPLHATPSWIRARYLRRLNREGVLLLRGLDSRLSKD-LPSDLQK 302
                 +  R    +  P+HAT +W     L  L   GV  +     RLS D +P D+Q 
Sbjct: 249 SREYYALAIRDTRIKAAPVHATANWYLENVLPVLQSYGVAAISPFSHRLSFDNVPMDIQH 428

Query: 303 LRCKVAFNALRFAEPIEELGNKIADRMKS 331
           LRCKV F AL F   I  LG+ +  R+++
Sbjct: 429 LRCKVNFQALDFVPHIRALGDSLISRLRN 515



 Score = 26.6 bits (57), Expect(3) = 4e-24
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 329 MKSKGPYLALHLRMEKDVWVRTGC 352
           +K +G ++ LHLR +KD+   + C
Sbjct: 580 IKMQGKFVGLHLRFDKDMAAHSAC 651



 Score = 23.1 bits (48), Expect(3) = 4e-24
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 176 YLMVVVSGGMNQQR 189
           Y+ V + GG+NQQR
Sbjct: 28  YIQVFLDGGLNQQR 69


>TC80247 similar to PIR|C86476|C86476 protein F15O4.45 [imported] -
           Arabidopsis thaliana, partial (29%)
          Length = 1225

 Score =  107 bits (268), Expect = 9e-24
 Identities = 60/160 (37%), Positives = 89/160 (55%), Gaps = 6/160 (3%)
 Frame = +3

Query: 176 YLMVVVSGGMNQQRNQIVDAVVIARILGAALVVPVLQVNVIWGDESEFGDIFDLEHFKRV 235
           YL++  +GG+NQQR  I DAV +A +L A LV+P+  +N +W D S FGDIFD   F + 
Sbjct: 723 YLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSHFGDIFDENFFIQS 902

Query: 236 LANDVRVVSALPSTHI------MTRPVEGRPPLHATPSWIRARYLRRLNREGVLLLRGLD 289
           L   V+VV  LP   +      ++  V  R    ++P+    + L +L     + +    
Sbjct: 903 LGKHVQVVRELPDDILQQFDNNISNIVNLRVKAWSSPAHYLKKVLPQLLEMRAVRIAPFS 1082

Query: 290 SRLSKDLPSDLQKLRCKVAFNALRFAEPIEELGNKIADRM 329
           +RL++ +PS +Q LRC   F ALRF+EPI  L   + DRM
Sbjct: 1083NRLAQSVPSKIQGLRCFANFGALRFSEPIRTLAESMVDRM 1202


>TC90613 similar to GP|6006861|gb|AAF00637.1| putative auxin-independent
           growth promoter protein {Arabidopsis thaliana}, partial
           (40%)
          Length = 817

 Score =  103 bits (257), Expect = 2e-22
 Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 15/255 (5%)
 Frame = +3

Query: 176 YLMVVVSGGMNQQRNQIVDAVVIARILGAALVVPVLQVNVIWGDES----EFGDIFDLEH 231
           ++   V GG    R+ I D V I+R+L A LV+P  Q ++     S     F  ++D E 
Sbjct: 48  FIYAKVFGGFANIRSSIPDLVAISRLLNATLVIPEFQESLRSKGVSPMFKSFSYLYDEEQ 227

Query: 232 FKRVLANDVRVVSALPSTHIMTRPVEG----RPPLHATPSWIRARYLRRLNREGVL-LLR 286
           F   L  DV +   LP + +  R        RP   ++P++     L +L +  V+ L+ 
Sbjct: 228 FIAYLKKDVIIAKTLPGSLMERRKRNEFPTFRPKSSSSPNFYIQEILPKLKKSKVIGLII 407

Query: 287 GLDSRLSKDLP---SDLQKLRCKVAFNALRFAEPIEELGNKIADRMKSKG-PYLALHLRM 342
                L   LP   +++Q+LRC+V+F AL+F   I+ LG+++ ++++S G P+LA H  +
Sbjct: 408 ANGGALQSVLPPTMAEIQRLRCRVSFQALQFRPEIQMLGHRMVNKLRSLGQPFLAYHPGL 587

Query: 343 EKDVWVRTGCLPGLTPEYDEVINNERIQ--RPELLTARSNMTYHQRKMAGLCPLNVMEVM 400
            ++     GC       + E+I + R Q  + ++L    N+  H R+  GLCPL   EV 
Sbjct: 588 LRETLAYNGCAELFQDVHTELIQHRRAQMIKDKILNEDLNVDSHLRRDKGLCPLMPEEVG 767

Query: 401 RLLKALGAPKDARIY 415
            LL  +G P    IY
Sbjct: 768 ILLPVMGYPSKTIIY 812


>AJ388792 similar to PIR|T51403|T51 hypothetical protein F14F8_120 -
           Arabidopsis thaliana, partial (29%)
          Length = 595

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 58/146 (39%), Positives = 87/146 (58%), Gaps = 7/146 (4%)
 Frame = +3

Query: 219 DESEFGDIFDLEHFKRVLANDVRVVSALPSTHIMTRPVEG-----RPPLH-ATPSWIRAR 272
           D SEF DIFDL+HF   L ++VR++  LP    + + VE       PP+  +  S+ + +
Sbjct: 6   DPSEFQDIFDLDHFITSLRDEVRILKELPPR--LKQKVENGFLYSMPPISWSDMSYYKNQ 179

Query: 273 YLRRLNREGVLLLRGLDSRLSKDLPS-DLQKLRCKVAFNALRFAEPIEELGNKIADRMKS 331
            L  + +  V+ L   D+RL+ +  S ++QKLRC+V F+ALRF   IEELG K+ + ++ 
Sbjct: 180 ILPLIQKYKVVHLNRTDARLANNGQSIEIQKLRCRVNFSALRFTPQIEELGRKVINLLRQ 359

Query: 332 KGPYLALHLRMEKDVWVRTGCLPGLT 357
            GP+L LHLR E D+   +GC  G T
Sbjct: 360 NGPFLVLHLRYEMDMLAFSGCTQGAT 437


>TC78478 similar to PIR|T06805|T06805 RT17-1 protein homolog - garden pea,
           partial (36%)
          Length = 875

 Score = 91.3 bits (225), Expect = 9e-19
 Identities = 57/155 (36%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
 Frame = +3

Query: 126 SEFLVSHVQLQAKGS--SEFWKKPNGLGYKPCLSFSNDYRRQSERVLKDRRKYLMVVVSG 183
           S  L S VQ +   S  SE W      G+K C     D       + +    Y+ V + G
Sbjct: 330 SRLLRSAVQRETPTSQLSEIWAPLENQGWKSC-----DESGNRPTLPEKSEGYIQVFLDG 494

Query: 184 GMNQQRNQIVDAVVIARILGAALVVPVLQVNVIWGDESEFGDIFDLEHFKRVLANDVRVV 243
           G+NQQR  I DAV +A+IL A LV+P L++N +W D S F DIFD++HF  VL +DV +V
Sbjct: 495 GLNQQRMGICDAVAVAKILNATLVIPYLELNPVWKDSSSFEDIFDVDHFIDVLKDDVSIV 674

Query: 244 SALPSTH---------IMTRPVEGR-PPLHATPSW 268
             LP  +         +  R    +  P+HAT +W
Sbjct: 675 KELPEEYSWSSREYYALAIRDTRIKAAPVHATANW 779


>TC83319 similar to PIR|G86357|G86357 Similar to auxin-independent growth
           promoter [imported] - Arabidopsis thaliana, partial
           (38%)
          Length = 1113

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
 Frame = +1

Query: 289 DSRLSKD-LPSDLQKLRCKVAFNALRFAEPIEELGNKIADRMKSKGPYLALHLRMEKDVW 347
           DSRL+ + LP D+QKLRC+  + ALRF+  IE++G  + +RM+S GPY+ LHLR EKD+ 
Sbjct: 745 DSRLANNHLPQDIQKLRCRACYEALRFSPRIEQMGKILVERMRSYGPYITLHLRYEKDML 924

Query: 348 VRTGCLPGLTPEYDEVINNERIQRPELLTARSNMTYHQRK 387
             +GC   L+            +  EL   R N TY +RK
Sbjct: 925 AFSGCTHDLSTS----------EAKELRIIRENTTYWKRK 1014



 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 40/105 (38%), Positives = 59/105 (56%)
 Frame = +3

Query: 142 EFWKKPNGLGYKPCLSFSNDYRRQSERVLKDRRKYLMVVVSGGMNQQRNQIVDAVVIARI 201
           + WK P   G+ PC   + +Y        ++ + YL+V  +GG+NQ R  I D V IARI
Sbjct: 318 KLWKPPPNHGFLPCTKPTPNYTTP-----ENSQGYLLVHTNGGLNQMRAGICDMVAIARI 482

Query: 202 LGAALVVPVLQVNVIWGDESEFGDIFDLEHFKRVLANDVRVVSAL 246
           + A LV+P L     W D S F DIFD + F   LA+D+++++ L
Sbjct: 483 INATLVIPELDKKSFWQDSSIFSDIFDEKRFISSLADDIKIINKL 617


>TC89607 similar to GP|20856498|gb|AAM26669.1 AT4g16650/dl4350w {Arabidopsis
           thaliana}, partial (22%)
          Length = 862

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 45/123 (36%), Positives = 69/123 (55%), Gaps = 1/123 (0%)
 Frame = +3

Query: 435 FPNFYNKEDLALPGELQPFVRKASLMAAIDYIVSEKSDVFMPSHGGNMGRAIQGHRAFTG 494
           FPN Y KE LA   EL+PF+  +S +AA+DYIV ++SDVF+ ++ GNM + + G R + G
Sbjct: 18  FPNIYTKEMLA-DEELKPFLPFSSRLAAVDYIVCDESDVFVTNNNGNMAKILAGRRRYMG 194

Query: 495 HKKYITPNKRHMLPYFL-NSSLSEEEFNRIIKELHQDSLGQPELRTNKNGRDVTKYPVPE 553
           HK+ I PN + +   F     +    F R +K   +  +G+P+    + GRD        
Sbjct: 195 HKRTIRPNAKKLSTLFAGRHQMDWHTFARKVKACQRGFMGEPD--EMRPGRDDHHEFPSS 368

Query: 554 CMC 556
           C+C
Sbjct: 369 CVC 377


>BF639405 similar to GP|7940275|gb| F24O1.5 {Arabidopsis thaliana}, partial
           (19%)
          Length = 500

 Score = 74.7 bits (182), Expect = 9e-14
 Identities = 47/139 (33%), Positives = 74/139 (52%), Gaps = 11/139 (7%)
 Frame = +2

Query: 174 RKYLMVVVSGGMNQQRNQIVDAVVIARILGAALVVPVLQVNVIWGDESEFGDIFDLEHFK 233
           R  ++V  +GG+NQQR  + +AVV+AR+L + LV+P    + +W D S+FGDI+  EHF 
Sbjct: 5   RTRILVTANGGINQQRVAVCNAVVVARLLNSTLVIPKFMYSSVWRDTSQFGDIYQEEHFI 184

Query: 234 RVLANDVRVVSALPST----------HIMTRPVEGRPPLHATPSWIRARYLRRLNREGVL 283
             L  D+R+V  LP             ++T    G+    A PS+     L  + +  V+
Sbjct: 185 NNLTPDIRIVRELPKKLQSLDLEAIGSVVTDVDMGK---EAKPSFYLKHILPIILKNQVV 355

Query: 284 LLRGLDSRLSKD-LPSDLQ 301
              G  +RL+ D +P +LQ
Sbjct: 356 HFIGFGNRLAFDPIPFELQ 412


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.136    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,026,114
Number of Sequences: 36976
Number of extensions: 235464
Number of successful extensions: 1300
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of query: 563
length of database: 9,014,727
effective HSP length: 101
effective length of query: 462
effective length of database: 5,280,151
effective search space: 2439429762
effective search space used: 2439429762
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)


Medicago: description of AC133864.7