BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC133780.8 - phase: 0 /pseudo
(287 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC78634 similar to PIR|T48567|T48567 ABA-responsive protein homo... 597 e-171
TC86648 similar to PIR|A86408|A86408 FH protein interacting prot... 199 8e-52
TC87123 weakly similar to GP|21554031|gb|AAM63112.1 unknown {Ara... 135 2e-32
TC80204 similar to GP|21554031|gb|AAM63112.1 unknown {Arabidopsi... 117 4e-27
TC84144 weakly similar to PIR|A86408|A86408 FH protein interacti... 76 7e-18
BM814150 weakly similar to PIR|A86408|A864 FH protein interactin... 60 1e-09
AW774168 similar to GP|20197888|gb| Expressed protein {Arabidops... 57 8e-09
TC89515 weakly similar to GP|11994144|dbj|BAB01165. contains sim... 36 0.019
TC93584 knotted class I homeodomain KNOX 35 0.043
TC80766 similar to GP|15292967|gb|AAK93594.1 unknown protein {Ar... 35 0.043
TC85398 similar to SP|O23787|THI4_CITSI Thiazole biosynthetic en... 34 0.057
TC79555 homologue to GP|10567859|gb|AAG18593.1 L8019.5 {Leishman... 34 0.074
TC77296 similar to GP|16323145|gb|AAL15307.1 AT5g11000/T30N20_27... 34 0.074
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {... 34 0.074
TC81266 weakly similar to GP|16415994|emb|CAB88653. hypothetical... 33 0.097
TC86129 similar to GP|8571476|gb|AAF76898.1| apetala2 domain-con... 33 0.17
TC78703 homologue to GP|13129456|gb|AAK13114.1 Putative retroele... 33 0.17
BF635948 similar to GP|21622312|emb putative protein {Neurospora... 32 0.22
TC79675 similar to GP|16604386|gb|AAL24199.1 At1g10700/F20B24.13... 32 0.28
TC81577 similar to PIR|T48012|T48012 hypothetical protein T17J13... 32 0.28
>TC78634 similar to PIR|T48567|T48567 ABA-responsive protein homolog
T31B5.20 - Arabidopsis thaliana, partial (67%)
Length = 1208
Score = 597 bits (1540), Expect = e-171
Identities = 287/287 (100%), Positives = 287/287 (100%)
Frame = +2
Query: 1 MNNNNNNNNQNQSSPDENPFASPTPPSSSSSSVPLPPQNHATTENWGTHMMGAPAVPSSH 60
MNNNNNNNNQNQSSPDENPFASPTPPSSSSSSVPLPPQNHATTENWGTHMMGAPAVPSSH
Sbjct: 122 MNNNNNNNNQNQSSPDENPFASPTPPSSSSSSVPLPPQNHATTENWGTHMMGAPAVPSSH 301
Query: 61 PDNKKAALQTASADGQGQPQVHYYQQDHPYVQHSPVDKPSSSPMESILHMFDSWSKKAEA 120
PDNKKAALQTASADGQGQPQVHYYQQDHPYVQHSPVDKPSSSPMESILHMFDSWSKKAEA
Sbjct: 302 PDNKKAALQTASADGQGQPQVHYYQQDHPYVQHSPVDKPSSSPMESILHMFDSWSKKAEA 481
Query: 121 TANNIWHNLKTGPSVSSAAMGKMNLTVKAISEGGFESLYKQIFTTYPNEKLKKTFACYLS 180
TANNIWHNLKTGPSVSSAAMGKMNLTVKAISEGGFESLYKQIFTTYPNEKLKKTFACYLS
Sbjct: 482 TANNIWHNLKTGPSVSSAAMGKMNLTVKAISEGGFESLYKQIFTTYPNEKLKKTFACYLS 661
Query: 181 TTTGPVAGTLYLSDIHLAFCSDRPLSFTAPSGQVTWSYYKVMVPLGKIGTVNPVIMRENH 240
TTTGPVAGTLYLSDIHLAFCSDRPLSFTAPSGQVTWSYYKVMVPLGKIGTVNPVIMRENH
Sbjct: 662 TTTGPVAGTLYLSDIHLAFCSDRPLSFTAPSGQVTWSYYKVMVPLGKIGTVNPVIMRENH 841
Query: 241 SERYIQIVTVDGHDFWFMGFVNYDKAVKNLSEGISHFVVSGVAAPST 287
SERYIQIVTVDGHDFWFMGFVNYDKAVKNLSEGISHFVVSGVAAPST
Sbjct: 842 SERYIQIVTVDGHDFWFMGFVNYDKAVKNLSEGISHFVVSGVAAPST 982
>TC86648 similar to PIR|A86408|A86408 FH protein interacting protein FIP1
[imported] - Arabidopsis thaliana, partial (84%)
Length = 1193
Score = 199 bits (507), Expect = 8e-52
Identities = 112/282 (39%), Positives = 161/282 (56%), Gaps = 9/282 (3%)
Frame = +1
Query: 2 NNNNNNNNQNQSSPDENPFASPTPPSSSSSSVPLPPQNHATTENWGTHMMGAPAVPSSHP 61
N+ ++ N SS + P +P P S S S ++A + + P P +
Sbjct: 82 NSKSDPQVNNMSSAGDQP-TNPKPQDSDSHS---HTPDYAPYPKLDPNDVAPPPPPVATE 249
Query: 62 DNKKAALQTASADGQGQPQVHYYQQDHPYVQHSPVDKPSSSP--MESILHMFDSWSKKA- 118
A T A+ +PYV +PV P+S+ ++S+ + W KKA
Sbjct: 250 SRATDAATTMPAES------------NPYVSPAPVPAPTSAKNTLDSVKDVLGKWGKKAA 393
Query: 119 EAT------ANNIWHNLKTGPSVSSAAMGKMNLTVKAISEGGFESLYKQIFTTYPNEKLK 172
EAT A N+W +LKTGPS + AA+G++ K ++EGG+E +++Q F T P E+L
Sbjct: 394 EATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLL 573
Query: 173 KTFACYLSTTTGPVAGTLYLSDIHLAFCSDRPLSFTAPSGQVTWSYYKVMVPLGKIGTVN 232
KT+ACYLST+ GPV G LYLS LAFCSD PLS+ Q WSYYKV++PL ++ VN
Sbjct: 574 KTYACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQT-GDQTQWSYYKVVIPLHQLRAVN 750
Query: 233 PVIMRENHSERYIQIVTVDGHDFWFMGFVNYDKAVKNLSEGI 274
P + N +E++IQI++VD H+FWFMGFV YD AVK++ E +
Sbjct: 751 PSTSKANPTEKFIQIISVDNHEFWFMGFVYYDSAVKHIQEAL 876
>TC87123 weakly similar to GP|21554031|gb|AAM63112.1 unknown {Arabidopsis
thaliana}, partial (59%)
Length = 1088
Score = 135 bits (339), Expect = 2e-32
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Frame = +2
Query: 115 SKKAEATANNIWHNLKTGPSVSSAAMGKMNLTVKAISEGGFESLYKQIFTTYPNEKLKKT 174
++K + A + ++K GP +S GK++L + I EGG +++K IF EK+ K
Sbjct: 419 TRKNTSFACRVHQHVKLGPKLSETLKGKLSLGARIIQEGGRGNIFKNIFGMQEGEKVLKA 598
Query: 175 FACYLSTTTGPVAGTLYLSDIHLAFCSDRPLSF-TAPSGQVTWSYYKVMVPLGKIGTVNP 233
CYL TT GP+AG L++S +AFCS+RP++F +A +G+ YKV++P+GKI VN
Sbjct: 599 SQCYLYTTAGPIAGVLFISTQKVAFCSERPITFSSASTGESRKIPYKVLIPIGKIKEVNE 778
Query: 234 VIMRENHSERYIQIVTVDGHDFWFMGFVNYDKAVKNLSEGIS 275
++YI+IVT D +FWFMGF+ Y+KA +NL + IS
Sbjct: 779 GQNVNQEEQKYIEIVTHDDSEFWFMGFLRYEKAFRNLQKAIS 904
>TC80204 similar to GP|21554031|gb|AAM63112.1 unknown {Arabidopsis
thaliana}, partial (56%)
Length = 1240
Score = 117 bits (294), Expect = 4e-27
Identities = 59/161 (36%), Positives = 93/161 (57%)
Frame = +1
Query: 115 SKKAEATANNIWHNLKTGPSVSSAAMGKMNLTVKAISEGGFESLYKQIFTTYPNEKLKKT 174
++KA++ + + +++ ++S K++L + + GG E ++ + F+ +E L K
Sbjct: 259 ARKADSLSQKVQEHVRLRANISETIKRKLSLGAQILQVGGVEKVFMRYFSVSEDESLLKI 438
Query: 175 FACYLSTTTGPVAGTLYLSDIHLAFCSDRPLSFTAPSGQVTWSYYKVMVPLGKIGTVNPV 234
CYLSTT+GP+AG L++S+ +AFCSDR + GQ+ YKV +PL I VN
Sbjct: 439 SQCYLSTTSGPLAGLLFISNEKVAFCSDRSIKVFNQKGQMRRIRYKVTIPLKNIKCVNQS 618
Query: 235 IMRENHSERYIQIVTVDGHDFWFMGFVNYDKAVKNLSEGIS 275
E +++YI IVTVD DFWFMG NY K L + I+
Sbjct: 619 QNVEKPTQKYINIVTVDNFDFWFMGVFNYHKTFNYLQKAIT 741
>TC84144 weakly similar to PIR|A86408|A86408 FH protein interacting protein
FIP1 [imported] - Arabidopsis thaliana, partial (15%)
Length = 637
Score = 75.9 bits (185), Expect(2) = 7e-18
Identities = 38/83 (45%), Positives = 52/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 148 KAISEGGFESLYKQIFTTYPNEKLKKTFACYLSTT-TGPVAGTLYLSDIHLAFCSDRPLS 206
K I+ GG E L++Q F + EKL K + CY+STT +GPV GTLY++ LAFCSD P+
Sbjct: 388 KVIANGGSEKLFQQTFGVFSGEKLLKQYVCYISTTASGPVIGTLYITTKRLAFCSDYPMC 567
Query: 207 FTAPSGQVTWSYYKVMVPLGKIG 229
S YYK ++ LG++G
Sbjct: 568 HHPFSFAAXCLYYKGVIQLGQLG 636
Score = 31.6 bits (70), Expect(2) = 7e-18
Identities = 18/69 (26%), Positives = 38/69 (54%), Gaps = 12/69 (17%)
Frame = +3
Query: 87 DHPYVQHSPVDKPSSS-----PMESILHMFDSWSKK-------AEATANNIWHNLKTGPS 134
++PYVQ SP + S++ PM+ + ++ S+K AE ++IW++++ +
Sbjct: 168 NNPYVQLSPANPSSAAANRPNPMDKVSGAINNCSRKVGEATRHAENMVDSIWNHVRMSSN 347
Query: 135 VSSAAMGKM 143
+ AAM ++
Sbjct: 348 PTDAAMARL 374
>BM814150 weakly similar to PIR|A86408|A864 FH protein interacting protein
FIP1 [imported] - Arabidopsis thaliana, partial (17%)
Length = 460
Score = 60.1 bits (144), Expect = 1e-09
Identities = 26/51 (50%), Positives = 38/51 (73%)
Frame = +3
Query: 227 KIGTVNPVIMRENHSERYIQIVTVDGHDFWFMGFVNYDKAVKNLSEGISHF 277
++GTV P R N E+YI+I TVDG++F FMGFV+YD+A+K L+E + +
Sbjct: 3 QLGTVTPATNRFNSREKYIEIFTVDGYEFLFMGFVSYDRALKTLNEVLHQY 155
>AW774168 similar to GP|20197888|gb| Expressed protein {Arabidopsis
thaliana}, partial (26%)
Length = 625
Score = 57.0 bits (136), Expect = 8e-09
Identities = 44/184 (23%), Positives = 78/184 (41%), Gaps = 22/184 (11%)
Frame = +1
Query: 4 NNNNNNQNQSSPDENPFASPT----PPSSSSSSVPLPPQNHATTENWGTHMMGAPAVPSS 59
N N + N+ + ++ + P +++ P P + A + G+ P
Sbjct: 82 NPNPSKSNRKTTPQHSLSRAAIMEQPKPETNTETPNPNGDAAAAKGAGSGSGSEPLGTEP 261
Query: 60 HPDNKKAALQ-----TASADGQGQPQVHYYQQDHPYVQHSPV---DKPSSSPMESIL--- 108
P + K ++ + P H + + Y SP P + ME+++
Sbjct: 262 SPGSMKKSVHWSPELVTESTFTSSPHEH---RSNTYFNSSPSFSQPPPQFNVMETVVTVR 432
Query: 109 HMFDSWS-------KKAEATANNIWHNLKTGPSVSSAAMGKMNLTVKAISEGGFESLYKQ 161
++ WS KKAE A N W +LKT PS++ AAMG++ K ++EGG+E ++
Sbjct: 433 NVLGRWSTKVGEATKKAETLAGNTWQHLKTSPSMAEAAMGRIAQGTKVLAEGGYEKIFLS 612
Query: 162 IFTT 165
F T
Sbjct: 613 TFDT 624
>TC89515 weakly similar to GP|11994144|dbj|BAB01165. contains similarity to
nodulin~gene_id:K10D20.11 {Arabidopsis thaliana},
partial (43%)
Length = 854
Score = 35.8 bits (81), Expect = 0.019
Identities = 25/76 (32%), Positives = 32/76 (41%), Gaps = 2/76 (2%)
Frame = +2
Query: 2 NNNNNNNNQNQSSPDENPFASPTPPSSSSSSVPLPPQNHATTENWGTHMMGAPAVPS--S 59
+NNNN++N NQ+S A+P P SSS P P + T+ P S
Sbjct: 449 SNNNNSSNTNQTSN-----ATPPSPQSSSPPSPAPSNQEGQSPPPDTNQTPPPTATSDHD 613
Query: 60 HPDNKKAALQTASADG 75
HP AA S G
Sbjct: 614 HPPRNGAASNFVSLAG 661
>TC93584 knotted class I homeodomain KNOX
Length = 1161
Score = 34.7 bits (78), Expect = 0.043
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Frame = +1
Query: 2 NNNNNNNNQNQSSPDENPFASPTPPS------------SSSSSVPLPPQNHATTENWGTH 49
NNNNNNNN N ++ + P P S +++SS+ L NH T G +
Sbjct: 148 NNNNNNNNNNTNANNTTGLFLPIPNSTNNNNNHYTNCNNNTSSIML-QNNHQNTPGLGYY 324
Query: 50 MMGAPAVPSSHPDNKKAALQTASADGQGQPQVHYYQQDHPYVQHSPVDKPS 100
M ++H + ++ + + P HY++ Y+ V PS
Sbjct: 325 FMDN---INNHGSSSSSSSSSVKSKIMAHP--HYHRLLEAYINCQKVGAPS 462
>TC80766 similar to GP|15292967|gb|AAK93594.1 unknown protein {Arabidopsis
thaliana}, partial (59%)
Length = 785
Score = 34.7 bits (78), Expect = 0.043
Identities = 28/97 (28%), Positives = 39/97 (39%)
Frame = +3
Query: 11 NQSSPDENPFASPTPPSSSSSSVPLPPQNHATTENWGTHMMGAPAVPSSHPDNKKAALQT 70
+ P +P ++ TP + SSS P PP + +P SHP Q
Sbjct: 90 HHQQPPPSPPSTTTPSNPSSSQNPPPPT-----------AVNSPQNSKSHPH------QQ 218
Query: 71 ASADGQGQPQVHYYQQDHPYVQHSPVDKPSSSPMESI 107
S Q P H+ + SP+ KPSSS +E I
Sbjct: 219 TSPQPQSHPDNHHLK--------SPMQKPSSSTVELI 305
>TC85398 similar to SP|O23787|THI4_CITSI Thiazole biosynthetic enzyme
chloroplast precursor. [Sweet orange] {Citrus sinensis},
partial (84%)
Length = 1514
Score = 34.3 bits (77), Expect = 0.057
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Frame = +3
Query: 4 NNNNNNQNQSSPDENPFA-----SPTPPSSSSSSVPLPPQNHATTENWGTHMMGAPAVPS 58
+N++ ++N SS + P SPTP +SS SVP+PP A T T +PS
Sbjct: 261 SNSHPSKNPSSLVK*PVVT*QT*SPTPTPTSS*SVPVPPVFPALTNYPKTQ---TSVLPS 431
Query: 59 SHPDNKKAALQTASADGQGQPQVHYYQQDHPYVQHSPVDKPSSSPMESILHMFDSWSKKA 118
S +N A + + P Y Q P+SS +S+L+M +KK
Sbjct: 432 S--NNPSALVVVHGSVASSSPPWLYANQ------------PTSSSTKSVLNM---TNKKT 560
Query: 119 EATANNIWHNLK 130
++N + ++L+
Sbjct: 561 TLSSNTLLYSLQ 596
>TC79555 homologue to GP|10567859|gb|AAG18593.1 L8019.5 {Leishmania major},
partial (1%)
Length = 1410
Score = 33.9 bits (76), Expect = 0.074
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 13 SSPDENPFASPTPPSSSSSSVP--LPPQNHATTENWGTHMMGAPAVPSSHPDNKKAALQT 70
SSP N + P PP+S SSSVP PP + + +P PSS P + +A
Sbjct: 1085 SSPATNANSPPFPPASPSSSVPPAKPPTSKSARSPAPV*SRPSPP-PSSSPGSAASASSR 1261
Query: 71 ASADGQGQP 79
SA + +P
Sbjct: 1262 CSASSRARP 1288
>TC77296 similar to GP|16323145|gb|AAL15307.1 AT5g11000/T30N20_270
{Arabidopsis thaliana}, partial (31%)
Length = 1293
Score = 33.9 bits (76), Expect = 0.074
Identities = 41/147 (27%), Positives = 60/147 (39%), Gaps = 15/147 (10%)
Frame = +2
Query: 6 NNNNQNQSSPDENPFAS---PTPPSSSSSSVPLPPQN--HATTENWGTHMMGAPAVPSSH 60
N QN SS +PF S P+P + + + P PP + H+T N T++ +
Sbjct: 113 NKTKQNMSS---SPFPSCFRPSPTTDDNRNSPPPPPSPPHSTNPNLTTYL---------Y 256
Query: 61 PDNKKAALQTASADGQGQPQVHYYQQDHPYVQHSPVDKPSSSPMESILHM--FDSW---- 114
N T S G+ +H HP+ SP PSSS LH+ F W
Sbjct: 257 QSNVGLVSLTWSRSILGR-SLHVQLHHHPF--DSPPTNPSSSSSSFHLHIKPFIFWKKHG 427
Query: 115 SKKAEATANNIWHNLK----TGPSVSS 137
+KK + + W+ K +GP S
Sbjct: 428 TKKLSSNTHLFWNLSKAKFGSGPEPDS 508
>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 883
Score = 33.9 bits (76), Expect = 0.074
Identities = 17/72 (23%), Positives = 39/72 (53%)
Frame = -1
Query: 2 NNNNNNNNQNQSSPDENPFASPTPPSSSSSSVPLPPQNHATTENWGTHMMGAPAVPSSHP 61
++++++++ + SSP + +SP+ SSS SS+P P ++ + +P SS P
Sbjct: 556 SSSSSSSSSSSSSPSSSSSSSPSSSSSSPSSLPPAPLASGSSSGSPSSSPSSPE*SSSSP 377
Query: 62 DNKKAALQTASA 73
+ + ++S+
Sbjct: 376 SSSSSCTSSSSS 341
>TC81266 weakly similar to GP|16415994|emb|CAB88653. hypothetical protein
{Neurospora crassa}, partial (2%)
Length = 644
Score = 33.5 bits (75), Expect = 0.097
Identities = 22/78 (28%), Positives = 29/78 (36%)
Frame = +3
Query: 25 PPSSSSSSVPLPPQNHATTENWGTHMMGAPAVPSSHPDNKKAALQTASADGQGQPQVHYY 84
PP+S + P PP NWG + G V P N Q H +
Sbjct: 306 PPASQNPIAPPPPPPQQRPSNWGGY--GYSGVVEIPPQNSNF-------------QHHQH 440
Query: 85 QQDHPYVQHSPVDKPSSS 102
Q H +V H+P P S+
Sbjct: 441 QVQHHHVPHAPPPPPPSN 494
>TC86129 similar to GP|8571476|gb|AAF76898.1| apetala2 domain-containing
protein {Atriplex hortensis}, partial (41%)
Length = 2500
Score = 32.7 bits (73), Expect = 0.17
Identities = 20/48 (41%), Positives = 25/48 (51%), Gaps = 8/48 (16%)
Frame = +2
Query: 6 NNNNQNQSSPDENPFASPTPP--------SSSSSSVPLPPQNHATTEN 45
N++ + SS +PF S TPP SSSSS PPQ + TEN
Sbjct: 1148 NSHLPSTSSSSSSPFYSSTPPFFQPSFSPQSSSSSSSFPPQPNFYTEN 1291
>TC78703 homologue to GP|13129456|gb|AAK13114.1 Putative retroelement pol
polyprotein {Oryza sativa} [Oryza sativa (japonica
cultivar-group)], partial (2%)
Length = 1235
Score = 32.7 bits (73), Expect = 0.17
Identities = 21/64 (32%), Positives = 31/64 (47%), Gaps = 4/64 (6%)
Frame = +3
Query: 2 NNNNNNNNQNQSSPDENPFASPTP-PSSSSSS---VPLPPQNHATTENWGTHMMGAPAVP 57
+ N N+NQ S P +P +P+P P SS SS P+PP + G+ +P +
Sbjct: 462 DRTNKNSNQTTSPPSPSPSVAPSPSPLSSHSSDALTPIPPPSPLN----GSSTPPSPVLD 629
Query: 58 SSHP 61
S P
Sbjct: 630 GSFP 641
>BF635948 similar to GP|21622312|emb putative protein {Neurospora crassa},
partial (6%)
Length = 538
Score = 32.3 bits (72), Expect = 0.22
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 2 NNNNNNNNQNQSSPDENPFASPTPPS-SSSSSVPLPPQNHATTENWGTHMMGAPAVPSSH 60
N N N N N + + P ++P+PP SSSSS P P N+ + H + H
Sbjct: 163 NPPNPNPNPNPNISSQFPSSAPSPPPPSSSSSYPFPHNNNNYPYDHHHHQLQHQHQQQHH 342
Query: 61 PDNK 64
N+
Sbjct: 343 QQNQ 354
>TC79675 similar to GP|16604386|gb|AAL24199.1 At1g10700/F20B24.13
{Arabidopsis thaliana}, partial (45%)
Length = 907
Score = 32.0 bits (71), Expect = 0.28
Identities = 17/31 (54%), Positives = 20/31 (63%)
Frame = +3
Query: 1 MNNNNNNNNQNQSSPDENPFASPTPPSSSSS 31
MNNNNNNNN N SS F+S +SS+S
Sbjct: 255 MNNNNNNNNNNNSS-----FSSSLVSASSAS 332
>TC81577 similar to PIR|T48012|T48012 hypothetical protein T17J13.160 -
Arabidopsis thaliana, partial (20%)
Length = 1491
Score = 32.0 bits (71), Expect = 0.28
Identities = 23/101 (22%), Positives = 35/101 (33%)
Frame = +3
Query: 2 NNNNNNNNQNQSSPDENPFASPTPPSSSSSSVPLPPQNHATTENWGTHMMGAPAVPSSHP 61
+ N N+QNQ +NP++ P P+ P P N + +H VP
Sbjct: 597 HQNQQGNHQNQQGNHQNPYSQPLRPNGFPLQPPFAPSNSYSP---NSHTFATTPVPPRTV 767
Query: 62 DNKKAALQTASADGQGQPQVHYYQQDHPYVQHSPVDKPSSS 102
N + + G + Y P H+P P S
Sbjct: 768 GNNFSTGSPRTVPDIGNLNISGY----PNNGHNPRTVPQRS 878
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.312 0.127 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,617,532
Number of Sequences: 36976
Number of extensions: 178684
Number of successful extensions: 2725
Number of sequences better than 10.0: 175
Number of HSP's better than 10.0 without gapping: 1878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2330
length of query: 287
length of database: 9,014,727
effective HSP length: 95
effective length of query: 192
effective length of database: 5,502,007
effective search space: 1056385344
effective search space used: 1056385344
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC133780.8