TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC133780.7 + phase: 0 
         (192 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC77374 weakly similar to GP|14517446|gb|AAK62613.1 AT5g14030/MU...   368  e-103
BQ135962 weakly similar to GP|14517446|gb| AT5g14030/MUA22_2 {Ar...    94  2e-20
TC90377 similar to GP|20197935|gb|AAM15321.1 F-box protein famil...    30  0.75
TC78638 similar to GP|22087278|gb|AAM90909.1 p44/SSL1-like prote...    28  2.2
TC86123 homologue to PIR|S71770|S71770 calcium-dependent protein...    27  4.9
AJ388697 similar to GP|9651733|gb|A proteasome regulatory ATPase...    27  6.4
BE249591 similar to GP|17065250|gb Unknown protein {Arabidopsis ...    27  6.4
TC87354 similar to GP|2576411|gb|AAC61784.1| similar to dynamin-...    26  8.3
TC78212 similar to GP|17381160|gb|AAL36392.1 unknown protein {Ar...    26  8.3

>TC77374 weakly similar to GP|14517446|gb|AAK62613.1 AT5g14030/MUA22_2
           {Arabidopsis thaliana}, partial (88%)
          Length = 950

 Score =  368 bits (944), Expect = e-103
 Identities = 192/194 (98%), Positives = 192/194 (98%), Gaps = 2/194 (1%)
 Frame = +1

Query: 1   MADPISKPLIAFLLIASFLLCSHASSDVPFIVAHKKASLNRLKTGAERVSVTIDIYNQGT 60
           MADPISKPLIAFLLIASFLLCSHASSDVPFIVAHKKASLNRLKTGAERVSVTIDIYNQGT
Sbjct: 73  MADPISKPLIAFLLIASFLLCSHASSDVPFIVAHKKASLNRLKTGAERVSVTIDIYNQGT 252

Query: 61  STAYDVSLSDDSWTSDLFSVISGTTSKTWEKLDAGGVLSHTFELEAKSKGVFAGEPAIIK 120
           STAYDVSLSDDSWTSDLFSVISGTTSKTWEKLDAGGVLSHTFELEAKSKGVFAGEPAIIK
Sbjct: 253 STAYDVSLSDDSWTSDLFSVISGTTSKTWEKLDAGGVLSHTFELEAKSKGVFAGEPAIIK 432

Query: 121 FRVPTSAALQEAYSTPILPLDVLADRAPEKKFEW--RLLAKYGSLISVISIIVMFVYLVA 178
           FRVPTSAALQEAYSTPILPLDVLADRAPEKKFEW  RLLAKYGSLISVISIIVMFVYLVA
Sbjct: 433 FRVPTSAALQEAYSTPILPLDVLADRAPEKKFEWAKRLLAKYGSLISVISIIVMFVYLVA 612

Query: 179 TPSKSGAKGSKKKR 192
           TPSKSGAKGSKKKR
Sbjct: 613 TPSKSGAKGSKKKR 654


>BQ135962 weakly similar to GP|14517446|gb| AT5g14030/MUA22_2 {Arabidopsis
           thaliana}, partial (22%)
          Length = 710

 Score = 94.4 bits (233), Expect = 2e-20
 Identities = 58/94 (61%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
 Frame = +3

Query: 51  VTIDIYNQGTSTAYDVSLSDD-SWTSDLFS----VISGTTSKTWEKLDAGGVLSHTFELE 105
           VTID++NQGTSTAYD           DLF     V      K+W    AGG LSHTFELE
Sbjct: 255 VTIDMFNQGTSTAYDSESGRR*PGQYDLFRTNQVVPLQRPGKSWT---AGGALSHTFELE 425

Query: 106 AKSKGVFAGEPAIIKFRVPTSAALQEAYSTPILP 139
           AKSKGV AGEP IIKFR PT AALQEAYS PI P
Sbjct: 426 AKSKGVLAGEPTIIKFRDPTRAALQEAYSPPIWP 527



 Score = 47.8 bits (112), Expect = 3e-06
 Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 5/143 (3%)
 Frame = +1

Query: 17  SFLLCSHASSDVPFIVAHKKASLNRLKTGAERVSVTIDIYNQGTSTAYDV-SLSDDSWTS 75
           SFL+CSHAS + PFI AHKKAS+N +KTG  +  ++  I +      +   SL+DD+  +
Sbjct: 151 SFLICSHASYEAPFIGAHKKASINWIKTGD*KSLMSPSICSTKEPLRHMTPSLADDNLDN 330

Query: 76  DLFSVISGTTSKTWEKLDAGGVLSHTFELEAKSKGVFAGEPAIIKFR----VPTSAALQE 131
             FS +       ++ L   G+L   F     S+        + +       P     + 
Sbjct: 331 MTFSGLIKWYH--FKDLGKAGLLEVPFPTHLSSRQNQREY*PVNQLSSSSVTPQGLLYRR 504

Query: 132 AYSTPILPLDVLADRAPEKKFEW 154
               P     VLA RAP+   EW
Sbjct: 505 RIHLPFGLSYVLAKRAPQNNNEW 573


>TC90377 similar to GP|20197935|gb|AAM15321.1 F-box protein family  AtFBL11
           {Arabidopsis thaliana}, partial (4%)
          Length = 793

 Score = 29.6 bits (65), Expect = 0.75
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +3

Query: 149 EKKFEWRLLAKYGSLISVISIIVMFVYLVAT 179
           + K++ R+ +KYG+L+ ++ +I  F Y+ AT
Sbjct: 486 QHKYKRRI*SKYGNLLPIMQVISFFTYVSAT 578


>TC78638 similar to GP|22087278|gb|AAM90909.1 p44/SSL1-like protein
           {Arabidopsis thaliana}, partial (85%)
          Length = 2060

 Score = 28.1 bits (61), Expect = 2.2
 Identities = 24/91 (26%), Positives = 42/91 (45%)
 Frame = +3

Query: 96  GVLSHTFELEAKSKGVFAGEPAIIKFRVPTSAALQEAYSTPILPLDVLADRAPEKKFEWR 155
           G L    E EA   G+ A E A  + R  +  +LQE  S  + P+D  A    + +   R
Sbjct: 372 GDLEDDDEDEANDDGLEAWERAYTEDR--SWESLQEDESGLLRPIDTTAIHHAQYRRRLR 545

Query: 156 LLAKYGSLISVISIIVMFVYLVATPSKSGAK 186
            LA   +   +   ++ ++Y+V   SK+ ++
Sbjct: 546 ALASNAATARIQKGLIRYLYIVVDLSKAASE 638


>TC86123 homologue to PIR|S71770|S71770 calcium-dependent protein kinase (EC
           2.7.1.-) - mung bean, complete
          Length = 2448

 Score = 26.9 bits (58), Expect = 4.9
 Identities = 22/77 (28%), Positives = 39/77 (50%)
 Frame = +1

Query: 97  VLSHTFELEAKSKGVFAGEPAIIKFRVPTSAALQEAYSTPILPLDVLADRAPEKKFEWRL 156
           +LS +F L A S  V + E  I + R+ +   L    S P++PL +  + +  K F W L
Sbjct: 760 ILSWSFVLVASSSIVSSREVIIPRGRLLS*PELLLVLSRPVIPLVLCIEISSLKTFCW-L 936

Query: 157 LAKYGSLISVISIIVMF 173
                SL+ ++++  +F
Sbjct: 937 TKMTISLLKLLTLASLF 987


>AJ388697 similar to GP|9651733|gb|A proteasome regulatory ATPase subunit 1
          {Trypanosoma brucei}, partial (3%)
          Length = 511

 Score = 26.6 bits (57), Expect = 6.4
 Identities = 11/24 (45%), Positives = 15/24 (61%)
 Frame = +1

Query: 7  KPLIAFLLIASFLLCSHASSDVPF 30
          +PLI FLL+ SF LC+    +  F
Sbjct: 61 RPLIMFLLVTSFSLCNSVLIETDF 132


>BE249591 similar to GP|17065250|gb Unknown protein {Arabidopsis thaliana},
           partial (31%)
          Length = 488

 Score = 26.6 bits (57), Expect = 6.4
 Identities = 14/39 (35%), Positives = 22/39 (55%)
 Frame = +1

Query: 104 LEAKSKGVFAGEPAIIKFRVPTSAALQEAYSTPILPLDV 142
           LE + K  +   PA+++  +   AAL E Y + I+ LDV
Sbjct: 259 LERELKNFYGQAPAVVEMCIQAGAALPEQYKS-IMRLDV 372


>TC87354 similar to GP|2576411|gb|AAC61784.1| similar to dynamin-like protein
            encoded by GenBank Accession Number X99669 {Arabidopsis
            thaliana}, partial (65%)
          Length = 1971

 Score = 26.2 bits (56), Expect = 8.3
 Identities = 13/39 (33%), Positives = 18/39 (45%)
 Frame = -1

Query: 154  WRLLAKYGSLISVISIIVMFVYLVATPSKSGAKGSKKKR 192
            W     YGS   +IS    ++YL+ TP K G +     R
Sbjct: 1344 WPSCILYGSTNIIISQAFTWIYLL*TPDKDGLENIMNSR 1228


>TC78212 similar to GP|17381160|gb|AAL36392.1 unknown protein {Arabidopsis
           thaliana}, partial (67%)
          Length = 1739

 Score = 26.2 bits (56), Expect = 8.3
 Identities = 38/130 (29%), Positives = 56/130 (42%), Gaps = 4/130 (3%)
 Frame = -1

Query: 16  ASFLLCSHASSDVPF--IVAHKKASLNRLKTGAERVSVTIDIYNQGTSTAYDVSLSDDSW 73
           ASFLL S AS D P         +SL+R+ T     S ++   N+ + ++  +S S  S 
Sbjct: 989 ASFLLSSLASRDTPSPREATCFSSSLDRVSTSWRFSSASLSFSNKASFSSCSISSSSRSA 810

Query: 74  TSDLFSVISGTTSKTWEKLDAGGVLSHTFELEAKSKGVFAGEPAIIKFRVPT--SAALQE 131
            +   S +S   S     + +GG L   F +   S G  A    I+ F   T  +AA  +
Sbjct: 809 EASR*SPVSLELSCL--IVMSGGNLFSLFLIVGGSIGGTAIGVRIVDFGGGTTGAAAAAD 636

Query: 132 AYSTPILPLD 141
              T  LP D
Sbjct: 635 RTETAGLPAD 606


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.317    0.132    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,172,900
Number of Sequences: 36976
Number of extensions: 58828
Number of successful extensions: 302
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of query: 192
length of database: 9,014,727
effective HSP length: 91
effective length of query: 101
effective length of database: 5,649,911
effective search space: 570641011
effective search space used: 570641011
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)