BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC133341.5 - phase: 1 /pseudo
(808 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC91578 similar to GP|22136910|gb|AAM91799.1 unknown protein {Ar... 385 e-145
BF645375 weakly similar to GP|22136910|gb| unknown protein {Arab... 439 e-123
CA990146 similar to PIR|T00959|T00 hypothetical protein F20D22.9... 303 2e-82
TC82588 similar to GP|22136910|gb|AAM91799.1 unknown protein {Ar... 200 8e-52
BE325600 similar to GP|22136910|gb| unknown protein {Arabidopsis... 186 3e-47
TC79118 similar to GP|16323188|gb|AAL15328.1 AT5g67320/K8K14_4 {... 55 1e-07
BG457241 homologue to PIR|F84600|F8 coatomer alpha subunit [impo... 49 6e-06
TC88481 similar to PIR|T00806|T02445 probable U4/U6 small nuclea... 49 1e-05
TC78914 similar to GP|13937195|gb|AAK50091.1 At1g78070/F28K19_28... 48 1e-05
TC86738 similar to PIR|T00593|T02480 sec13-related protein At2g3... 48 2e-05
TC79342 similar to GP|10177096|dbj|BAB10430. Notchless protein h... 47 3e-05
TC90185 similar to PIR|F84901|F84901 probable photomorphogenesis... 46 5e-05
TC82282 similar to PIR|T08544|T08544 hypothetical protein F27B13... 45 1e-04
TC83414 weakly similar to GP|17381206|gb|AAL36415.1 unknown prot... 44 2e-04
TC84162 similar to GP|15810485|gb|AAL07130.1 putative WD40-repea... 43 5e-04
TC82717 weakly similar to GP|21539583|gb|AAM53344.1 putative coa... 42 7e-04
TC92083 similar to PIR|T08547|T08547 hypothetical protein F27B13... 42 0.001
TC79322 similar to GP|13605815|gb|AAK32893.1 At2g32700/F24L7.16 ... 42 0.001
TC88475 similar to GP|20260442|gb|AAM13119.1 unknown protein {Ar... 41 0.002
TC80769 similar to GP|11141605|gb|AAG32022.1 LEUNIG {Arabidopsis... 41 0.002
>TC91578 similar to GP|22136910|gb|AAM91799.1 unknown protein {Arabidopsis
thaliana}, partial (25%)
Length = 1204
Score = 385 bits (989), Expect(2) = e-145
Identities = 192/244 (78%), Positives = 203/244 (82%)
Frame = +2
Query: 559 SRIQSELATSVAAAAATELPCTVKLRVWSHDIKNPCSPLNADRCRLIIPHAVLCSEMGAH 618
S ELA SVA AAATELPCTV L+VWS+D+KNPC+PL RCRL IPH VLCSEMGAH
Sbjct: 476 SNPSQELAKSVATAAATELPCTVNLKVWSYDLKNPCAPLQ--RCRLTIPHVVLCSEMGAH 649
Query: 619 FSPCGRFLAACVACMLPHIEADPGLQTPVHQESGIATSPTRHPISAHQVMYELRIYSLEE 678
FSPCGRFLAACVACM PH+EADPGLQT VHQE G+ TSPTRHPISAHQVMYELRIYSLEE
Sbjct: 650 FSPCGRFLAACVACMHPHMEADPGLQTLVHQEPGLPTSPTRHPISAHQVMYELRIYSLEE 829
Query: 679 ATFGLVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLE 738
ATFG VL SR IRAAHCLTSIQFSPTSEHILLAYGRRH SLLK IV+DG +Y VL
Sbjct: 830 ATFGSVLVSRPIRAAHCLTSIQFSPTSEHILLAYGRRHSSLLKGIVLDGGGPSSVYPVLG 1009
Query: 739 VYRVSDMELVRVLPSAEDEVNVACFHPFPGGGLVYGTKEGKLRILHYDGARPVNGTGPSY 798
V VSDM+LVRVL SA DEVNVACFHPFPGGGLVYGTKEGKL + +D VNGTG Y
Sbjct: 1010VSGVSDMDLVRVLSSAGDEVNVACFHPFPGGGLVYGTKEGKLSVFQFDRTCNVNGTGSGY 1189
Query: 799 FPEE 802
FPEE
Sbjct: 1190FPEE 1201
Score = 150 bits (378), Expect(2) = e-145
Identities = 88/182 (48%), Positives = 111/182 (60%), Gaps = 1/182 (0%)
Frame = +3
Query: 382 NGMGIGIGNLTMDGMETDETRPAEGSQHRNPTDASSLNGMLHGLSR-QTANHGVHPEDGH 440
N M IGI NLTM G E ET PAE SQH N H + R + + HG P+
Sbjct: 12 NQMRIGINNLTMGGREAYETEPAEASQHENAD---------HVVKRVELSEHGQFPQ--- 155
Query: 441 PFVSSRDPSGWELPFLQGWMMGQSQAGLPSMLPHTGVSRDTLAPQISSSVMANTLPTSNA 500
V S D +GWELPFLQGW++GQSQ G+PSMLP QI S M + L T+N
Sbjct: 156 -IVPSPDSNGWELPFLQGWLVGQSQVGVPSMLPQ----------QIGSFTMPSNLFTTNV 302
Query: 501 DVAMPSSAMSGSINIPGSSVRSGLRSHFSHSRTPVSESGNLAASINTPHDGSDIQTIMSR 560
++A+P S M I+IP + ++SGL++ FS SR PV++ GNL SIN PHDG D QTI++R
Sbjct: 303 ELAVPPSGMPNGISIP-AVLQSGLQNQFSPSRLPVTDFGNLVPSINLPHDGFDSQTIINR 479
Query: 561 IQ 562
IQ
Sbjct: 480 IQ 485
>BF645375 weakly similar to GP|22136910|gb| unknown protein {Arabidopsis
thaliana}, partial (4%)
Length = 647
Score = 439 bits (1128), Expect = e-123
Identities = 215/215 (100%), Positives = 215/215 (100%)
Frame = +3
Query: 290 HVTLSSEPTNVSLPFFLVPPYTVDESRAELQHASHDAGSGRIQIESSAVAQFQADTNSTE 349
HVTLSSEPTNVSLPFFLVPPYTVDESRAELQHASHDAGSGRIQIESSAVAQFQADTNSTE
Sbjct: 3 HVTLSSEPTNVSLPFFLVPPYTVDESRAELQHASHDAGSGRIQIESSAVAQFQADTNSTE 182
Query: 350 QHDTTVSPMDTVSEIPTNSQAGTEYPAHTAFSNGMGIGIGNLTMDGMETDETRPAEGSQH 409
QHDTTVSPMDTVSEIPTNSQAGTEYPAHTAFSNGMGIGIGNLTMDGMETDETRPAEGSQH
Sbjct: 183 QHDTTVSPMDTVSEIPTNSQAGTEYPAHTAFSNGMGIGIGNLTMDGMETDETRPAEGSQH 362
Query: 410 RNPTDASSLNGMLHGLSRQTANHGVHPEDGHPFVSSRDPSGWELPFLQGWMMGQSQAGLP 469
RNPTDASSLNGMLHGLSRQTANHGVHPEDGHPFVSSRDPSGWELPFLQGWMMGQSQAGLP
Sbjct: 363 RNPTDASSLNGMLHGLSRQTANHGVHPEDGHPFVSSRDPSGWELPFLQGWMMGQSQAGLP 542
Query: 470 SMLPHTGVSRDTLAPQISSSVMANTLPTSNADVAM 504
SMLPHTGVSRDTLAPQISSSVMANTLPTSNADVAM
Sbjct: 543 SMLPHTGVSRDTLAPQISSSVMANTLPTSNADVAM 647
>CA990146 similar to PIR|T00959|T00 hypothetical protein F20D22.9 -
Arabidopsis thaliana, partial (15%)
Length = 691
Score = 303 bits (775), Expect = 2e-82
Identities = 150/150 (100%), Positives = 150/150 (100%)
Frame = +3
Query: 659 RHPISAHQVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGS 718
RHPISAHQVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGS
Sbjct: 3 RHPISAHQVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGS 182
Query: 719 LLKSIVIDGETTLPIYTVLEVYRVSDMELVRVLPSAEDEVNVACFHPFPGGGLVYGTKEG 778
LLKSIVIDGETTLPIYTVLEVYRVSDMELVRVLPSAEDEVNVACFHPFPGGGLVYGTKEG
Sbjct: 183 LLKSIVIDGETTLPIYTVLEVYRVSDMELVRVLPSAEDEVNVACFHPFPGGGLVYGTKEG 362
Query: 779 KLRILHYDGARPVNGTGPSYFPEETIVGVS 808
KLRILHYDGARPVNGTGPSYFPEETIVGVS
Sbjct: 363 KLRILHYDGARPVNGTGPSYFPEETIVGVS 452
>TC82588 similar to GP|22136910|gb|AAM91799.1 unknown protein {Arabidopsis
thaliana}, partial (15%)
Length = 706
Score = 200 bits (509), Expect(2) = 8e-52
Identities = 108/175 (61%), Positives = 119/175 (67%), Gaps = 20/175 (11%)
Frame = +2
Query: 28 NVFNLLARREISPRTKHVAR--------------------DAKRGLLSWYLNYFSL*TIS 67
NVF+LLA+REISPR KHV + DAK GLLSW
Sbjct: 233 NVFSLLAQREISPRNKHVRKCHWGESSESKSGCSRSGTVVDAKCGLLSW----------- 379
Query: 68 TKM*AS*ITTSLKMILRVEADSLRHLSAKYCPLLPAPRSTIAAAFSPDGKVLASTHGDHT 127
VEA+SL+HLSAKYCPLLPAPRSTIAA+FSPDGK+LASTHGDHT
Sbjct: 380 -----------------VEAESLQHLSAKYCPLLPAPRSTIAASFSPDGKILASTHGDHT 508
Query: 128 VKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQEVRLWDANTSECI 182
VKIIDCETG CLKVL+GH RTPWVVRFHPL +ILASGSLDQEVRLWDA++SE I
Sbjct: 509 VKIIDCETGNCLKVLVGHRRTPWVVRFHPLQRQILASGSLDQEVRLWDASSSEWI 673
Score = 22.7 bits (47), Expect(2) = 8e-52
Identities = 8/9 (88%), Positives = 9/9 (99%)
Frame = +1
Query: 184 SHHFYRPIA 192
SH+FYRPIA
Sbjct: 676 SHYFYRPIA 702
>BE325600 similar to GP|22136910|gb| unknown protein {Arabidopsis thaliana},
partial (8%)
Length = 579
Score = 186 bits (472), Expect = 3e-47
Identities = 111/182 (60%), Positives = 118/182 (63%), Gaps = 9/182 (4%)
Frame = +3
Query: 7 FISVFCI-------IFLSSDVLNLSHCSNVFNLLARREISPRTKHVARDAKRGLLSWYLN 59
F+ FCI I + D S+ SNVFNLLARREISPRTKHVARDAKR LLSW
Sbjct: 111 FVVYFCILHTHMTRIHRNRDRTGNSNGSNVFNLLARREISPRTKHVARDAKRVLLSW--- 281
Query: 60 YFSL*TISTKM*AS*ITTSLKMILRVEADSLRHLSAKYCPLLPAPRSTIAAAFSPDGKVL 119
VEADSLRHLSAKYCPLLPAPRSTIAAAFSPDGKVL
Sbjct: 282 -------------------------VEADSLRHLSAKYCPLLPAPRSTIAAAFSPDGKVL 386
Query: 120 ASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLH--PKILASGSLDQEVRLWDAN 177
ASTHGDHTVKIIDCETGRCLKVLIGHMRTP + +H K L G+ + WDAN
Sbjct: 387 ASTHGDHTVKIIDCETGRCLKVLIGHMRTP-LGG*GSIHCIQKYLLVGAGSRSSNYWDAN 563
Query: 178 TS 179
TS
Sbjct: 564 TS 569
>TC79118 similar to GP|16323188|gb|AAL15328.1 AT5g67320/K8K14_4 {Arabidopsis
thaliana}, partial (44%)
Length = 1098
Score = 54.7 bits (130), Expect = 1e-07
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Frame = +2
Query: 112 FSPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPK--------ILA 163
+ P G +LAS D T KI + + L H + + +R+ P P +LA
Sbjct: 341 WDPTGTLLASCSDDITAKIWSVKQDKYLHDFREHSKEIYTIRWSPTGPGTNNPNKKLLLA 520
Query: 164 SGSLDQEVRLWDANTSECITSHHFYR-PIASIAFHAKGEIIAVASGHK-LYIW 214
S S D V+LWD + I S + +R P+ S+AF GE IA S K L+IW
Sbjct: 521 SASFDSTVKLWDIELGKLIHSLNGHRHPVYSVAFSPNGEYIASGSLDKSLHIW 679
Score = 49.7 bits (117), Expect = 4e-06
Identities = 28/94 (29%), Positives = 50/94 (52%)
Frame = +2
Query: 118 VLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQEVRLWDAN 177
+LAS D TVK+ D E G+ + L GH + V F P + + +ASGSLD+ + +W
Sbjct: 512 LLASASFDSTVKLWDIELGKLIHSLNGHRHPVYSVAFSP-NGEYIASGSLDKSLHIWSLK 688
Query: 178 TSECITSHHFYRPIASIAFHAKGEIIAVASGHKL 211
+ I +++ I + ++ +G+ IA + +
Sbjct: 689 EGKIIRTYNGSGGIFEVCWNKEGDKIAACFANNI 790
>BG457241 homologue to PIR|F84600|F8 coatomer alpha subunit [imported] -
Arabidopsis thaliana, partial (15%)
Length = 654
Score = 49.3 bits (116), Expect = 6e-06
Identities = 29/86 (33%), Positives = 47/86 (53%), Gaps = 3/86 (3%)
Frame = +1
Query: 125 DHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQEVRLWDANTSECI-- 182
D+ +K+ + + RCL L+GH+ V+FH P I+ S S DQ +R+W+ + CI
Sbjct: 286 DYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHESPWIV-SASDDQTIRIWNWQSRTCISV 462
Query: 183 -TSHHFYRPIASIAFHAKGEIIAVAS 207
T H+ Y + FH K +++ AS
Sbjct: 463 LTGHNHY--VMCALFHPKDDLVVSAS 534
Score = 43.5 bits (101), Expect = 3e-04
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 112 FSPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQEV 171
F + + S D T++I + ++ C+ VL GH FHP ++ S SLDQ V
Sbjct: 373 FHHESPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCALFHP-KDDLVVSASLDQTV 549
Query: 172 RLWD 175
R+WD
Sbjct: 550 RVWD 561
>TC88481 similar to PIR|T00806|T02445 probable U4/U6 small nuclear
ribonucleoprotein [imported] - Arabidopsis thaliana,
partial (60%)
Length = 1836
Score = 48.5 bits (114), Expect = 1e-05
Identities = 32/118 (27%), Positives = 52/118 (43%), Gaps = 1/118 (0%)
Frame = +1
Query: 105 RSTIAAAFSPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILAS 164
R +FS DGK LA+ K+ + + L GH + V + P+H LA+
Sbjct: 952 RPLTGCSFSRDGKGLATCSFTGATKLWSMPNVKKVSTLKGHTQRATDVAYSPVHKNHLAT 1131
Query: 165 GSLDQEVRLWDANTSECITSHHFYRPIASIAFHAKGEIIAVASGHKLY-IWHYDKKGE 221
S D+ + W+ + T +A IAFH G+ + AS K + +W + + E
Sbjct: 1132 ASADRTAKYWNDQGALLGTFKGHLERLARIAFHPSGKYLGTASYDKTWRLWDVETEEE 1305
Score = 47.8 bits (112), Expect = 2e-05
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 3/145 (2%)
Frame = +1
Query: 111 AFSPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQE 170
AF P GK L + D T ++ D ET L + GH R+ + + FH + AS LD
Sbjct: 1222 AFHPSGKYLGTASYDKTWRLWDVETEEELLLQEGHSRSVYGLDFHH-DGSLAASCGLDAL 1398
Query: 171 VRLWDANTSECITS-HHFYRPIASIAFHAKGEIIAV-ASGHKLYIWHYDKKGEASYSPIF 228
R+WD T + + + I I+F G +A + IW KK ++
Sbjct: 1399 ARVWDLRTGRSVLALEGHVKSILGISFSPNGYHLATGGEDNTCRIWDLRKK-----KSLY 1563
Query: 229 VLKTRRSL-RAVHFHPHAAPYLLTA 252
+ +L V F P +L+TA
Sbjct: 1564 TIPAHSNLISQVKFEPQEGYFLVTA 1638
Score = 40.0 bits (92), Expect = 0.004
Identities = 24/71 (33%), Positives = 35/71 (48%)
Frame = +1
Query: 105 RSTIAAAFSPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILAS 164
RS F DG + AS D ++ D TGR + L GH+++ + F P + LA+
Sbjct: 1330 RSVYGLDFHHDGSLAASCGLDALARVWDLRTGRSVLALEGHVKSILGISFSP-NGYHLAT 1506
Query: 165 GSLDQEVRLWD 175
G D R+WD
Sbjct: 1507 GGEDNTCRIWD 1539
Score = 39.7 bits (91), Expect = 0.005
Identities = 28/120 (23%), Positives = 49/120 (40%)
Frame = +1
Query: 105 RSTIAAAFSPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILAS 164
+S + +FSP+G LA+ D+T +I D + L + H V+F P L +
Sbjct: 1456 KSILGISFSPNGYHLATGGEDNTCRIWDLRKKKSLYTIPAHSNLISQVKFEPQEGYFLVT 1635
Query: 165 GSLDQEVRLWDANTSECITSHHFYRPIASIAFHAKGEIIAVASGHKLYIWHYDKKGEASY 224
S D ++W S ++P+ ++ SGH+ + D G+ Y
Sbjct: 1636 ASYDMTAKVW---------SSRDFKPVKTL------------SGHEAKVTSLDVLGDGGY 1752
>TC78914 similar to GP|13937195|gb|AAK50091.1 At1g78070/F28K19_28 {Arabidopsis
thaliana}, partial (76%)
Length = 1732
Score = 48.1 bits (113), Expect = 1e-05
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Frame = +1
Query: 110 AAFSPDGKVLASTHGDHTVKII-DCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSLD 168
A+ SPDGK+LA GD T +I D TG+ L GH+ + +HP + +ILA+G+ D
Sbjct: 940 ASVSPDGKLLA-VLGDSTEGLIADANTGKVTGNLKGHLDYSFSSAWHP-NGQILATGNQD 1113
Query: 169 QEVRLWD-ANTSECI-TSHHFYRPIASIAFHAKGEIIAVA 206
RLWD N SE I I S+ F + G+ +A+A
Sbjct: 1114 TTCRLWDIRNLSESIAVLKGRMGAIRSLKFTSDGKFLAMA 1233
>TC86738 similar to PIR|T00593|T02480 sec13-related protein At2g30050 -
Arabidopsis thaliana, complete
Length = 1278
Score = 47.8 bits (112), Expect = 2e-05
Identities = 38/101 (37%), Positives = 49/101 (47%), Gaps = 9/101 (8%)
Frame = +2
Query: 116 GKVLASTHGDHTVKIIDC--ETGRCLKVLIGHMRTPWVVRF-HPLHPKILASGSLDQEVR 172
GK LA+ DHT+KII + L L GH W V + HP +LAS S D V
Sbjct: 188 GKRLATASSDHTIKIIGVSNSASQHLATLTGHQGPVWEVAWAHPKFGSLLASCSYDGRVI 367
Query: 173 LW-DANTSECITSHHFYRPIASI-----AFHAKGEIIAVAS 207
LW + N +E I +H F +S+ A H G +A AS
Sbjct: 368 LWKEGNQNEWIQAHVFDEHKSSVNSVAWAPHELGLCLACAS 490
>TC79342 similar to GP|10177096|dbj|BAB10430. Notchless protein homolog
{Arabidopsis thaliana}, partial (47%)
Length = 873
Score = 47.0 bits (110), Expect = 3e-05
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +3
Query: 106 STIAAAFSPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASG 165
+ ++ AFSPDG+ LAS GD TV+ D T + GH + + P K L SG
Sbjct: 501 AVLSVAFSPDGRQLASGSGDTTVRFWDLGTQTPMYTCTGHKNWVLCIAWSP-DGKYLVSG 677
Query: 166 SLDQEVRLWDANTSE 180
S+ E+ WD T +
Sbjct: 678 SMSGELICWDPQTGK 722
Score = 39.7 bits (91), Expect = 0.005
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +3
Query: 108 IAAAFSPDGKVLASTHGDHTVKIIDCETGRCL-KVLIGHMRTPWVVRFHPLHPKI----L 162
+ A+SPDGK L S + D +TG+ L L GH + + + P+H
Sbjct: 633 LCIAWSPDGKYLVSGSMSGELICWDPQTGKQLGNALTGHKKWITGISWEPVHLNAPCRRF 812
Query: 163 ASGSLDQEVRLWDANTSECI 182
S S D + R+WD + +CI
Sbjct: 813 VSASKDGDARIWDVSLKKCI 872
>TC90185 similar to PIR|F84901|F84901 probable photomorphogenesis repressor
protein [imported] - Arabidopsis thaliana, partial (32%)
Length = 714
Score = 46.2 bits (108), Expect = 5e-05
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +1
Query: 119 LASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQEVRLWDANT 178
LAST D V++ D TG+ L + H + W V F PK+ ASGS D V+LW+ +
Sbjct: 424 LASTDYDGVVQMWDAGTGQPLSQYMEHQKRAWSVHFSASDPKMFASGSDDCSVKLWNISE 603
Query: 179 SECI 182
I
Sbjct: 604 RNSI 615
>TC82282 similar to PIR|T08544|T08544 hypothetical protein F27B13.70 -
Arabidopsis thaliana, partial (84%)
Length = 904
Score = 45.1 bits (105), Expect = 1e-04
Identities = 24/69 (34%), Positives = 37/69 (52%)
Frame = +2
Query: 108 IAAAFSPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSL 167
++ A+SPDGK LA D T+ + D + + L L GH + + P P++L S S
Sbjct: 560 LSVAWSPDGKRLACGSMDGTISVFDVQRAKFLHHLEGHFMPVRSLVYSPYDPRLLFSASD 739
Query: 168 DQEVRLWDA 176
D V ++DA
Sbjct: 740 DGNVHMYDA 766
Score = 38.9 bits (89), Expect = 0.008
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Frame = +2
Query: 145 HMRTPWVVRFHPL---HPKILASGSLDQEVRLWDA--------NTSECITSHHFYRPIAS 193
H + W V + P P +L +GSLD+ VRLW + NT C+ +AS
Sbjct: 113 HDDSVWAVTWAPATATRPPLLLTGSLDETVRLWKSDDLVLERTNTGHCL-------GVAS 271
Query: 194 IAFHAKGEIIAVASGHKLYIWHYDKKGEASYSPIFVLKTRRSLRAVHFHPHAAPYLL--- 250
+A H G IA +S ++ +D A+ + + + + + F P A +
Sbjct: 272 VAAHPLGS-IAASSSLDSFVRVFDVDSNATIATLEAPPS--EVWQMRFDPKGAILAVAGG 442
Query: 251 -TAEVNDLDSSDSSMTEATSIGYLQYPPPA 279
+A VN D+S + SI ++ P P+
Sbjct: 443 GSASVNLWDTSTWELVVTLSIPRVEGPKPS 532
>TC83414 weakly similar to GP|17381206|gb|AAL36415.1 unknown protein
{Arabidopsis thaliana}, partial (28%)
Length = 1088
Score = 43.9 bits (102), Expect = 2e-04
Identities = 34/143 (23%), Positives = 62/143 (42%), Gaps = 18/143 (12%)
Frame = +2
Query: 85 VEADSLRHLSAKYCPLLPAPRSTIAA----------------AFSPDGKVLASTHGDHTV 128
V+ + LR SA C ++P I A+S G +L+S+ D TV
Sbjct: 191 VKTEKLRKSSASTCVIIPPKTFRILVKPLHEFQGHSDDILDLAWSKSGFLLSSSV-DKTV 367
Query: 129 KIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQEVRLWDANTSECITSHHFY 188
++ +CL+V H V F+P++ SGS+D +VR+W+ +
Sbjct: 368 RLWQVGISKCLRVF-SHNNYVTCVNFNPVNDNFFISGSIDGKVRIWEVVRCRVVDYIDIR 544
Query: 189 RPIASIAF--HAKGEIIAVASGH 209
+ ++ F + +G I+ +G+
Sbjct: 545 EIVTAVCFCPNGQGTIVGTMTGN 613
>TC84162 similar to GP|15810485|gb|AAL07130.1 putative WD40-repeat protein
{Arabidopsis thaliana}, partial (29%)
Length = 628
Score = 42.7 bits (99), Expect = 5e-04
Identities = 27/101 (26%), Positives = 49/101 (47%), Gaps = 1/101 (0%)
Frame = +1
Query: 105 RSTIAAAFSPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILAS 164
R + FSP + + + GD T++I G CLK GH + F +I++
Sbjct: 115 RGIWSVEFSPVDQCVVTASGDKTIRIWAISDGSCLKTFEGHTSSVLRALFVTRGTQIVSC 294
Query: 165 GSLDQEVRLWDANTSECITSHHFYR-PIASIAFHAKGEIIA 204
G+ D V+LW ++EC+ ++ + + ++A K E +A
Sbjct: 295 GA-DGLVKLWTVKSNECVATYDNHEDKVWALAVGRKTETLA 414
>TC82717 weakly similar to GP|21539583|gb|AAM53344.1 putative coatomer
complex subunit {Arabidopsis thaliana}, partial (29%)
Length = 1118
Score = 42.4 bits (98), Expect = 7e-04
Identities = 23/66 (34%), Positives = 35/66 (52%)
Frame = +1
Query: 113 SPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQEVR 172
S D + L S D+T K+ D ++ C++ L GH + HP P I+ + S D V+
Sbjct: 676 SNDKQYLLSGSDDYTAKVWDYDSKNCVQTLEGHKNNVTAICAHPEIP-IIITASEDSTVK 852
Query: 173 LWDANT 178
+WDA T
Sbjct: 853 IWDAVT 870
Score = 33.9 bits (76), Expect = 0.26
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +1
Query: 111 AFSP-DGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPK-ILASGSLD 168
AF+P D AS D T+KI ++ GH++ V + + K L SGS D
Sbjct: 535 AFNPKDPSTFASASLDGTLKIWTIDSSAPNFTFEGHLKGMNCVDYFESNDKQYLLSGSDD 714
Query: 169 QEVRLWDANTSECI-TSHHFYRPIASIAFHAKGEIIAVAS 207
++WD ++ C+ T + +I H + II AS
Sbjct: 715 YTAKVWDYDSKNCVQTLEGHKNNVTAICAHPEIPIIITAS 834
Score = 31.2 bits (69), Expect = 1.7
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Frame = +1
Query: 125 DHTVKIIDCETG-RCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQEVRLWDANTS-ECI 182
D +K+ + + G C + G+ V F+P P AS SLD +++W ++S
Sbjct: 448 DQVLKLWNWKKGWSCDETFEGNSHYVMQVAFNPKDPSTFASASLDGTLKIWTIDSSAPNF 627
Query: 183 TSHHFYRPIASIAFHAKGEIIAVASGHKLY---IWHYDKK 219
T + + + + + + SG Y +W YD K
Sbjct: 628 TFEGHLKGMNCVDYFESNDKQYLLSGSDDYTAKVWDYDSK 747
>TC92083 similar to PIR|T08547|T08547 hypothetical protein F27B13.100 -
Arabidopsis thaliana, partial (34%)
Length = 557
Score = 41.6 bits (96), Expect = 0.001
Identities = 24/62 (38%), Positives = 32/62 (50%)
Frame = +2
Query: 114 PDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQEVRL 173
PDGK+ A+ DH ++I + G L VL H T V F K++AS S D V L
Sbjct: 101 PDGKIAATAGWDHRIRIYNYRKGNALAVLKYHHATCNAVNFSS-DCKLMASASADTTVAL 277
Query: 174 WD 175
W+
Sbjct: 278 WE 283
>TC79322 similar to GP|13605815|gb|AAK32893.1 At2g32700/F24L7.16
{Arabidopsis thaliana}, partial (59%)
Length = 1824
Score = 41.6 bits (96), Expect = 0.001
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = +2
Query: 108 IAAAFSPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSL 167
+ FS DGK+LAS D V + + ET + H VRF P + LA+ S
Sbjct: 812 VCCHFSSDGKLLASAGHDKKVVLWNMETLKTQSTPEEHTVIITDVRFRPNSTQ-LATSSF 988
Query: 168 DQEVRLWDAN----TSECITSHHFYRPIASIAFHAK 199
D VRLWDA + + + H + +AS+ FH K
Sbjct: 989 DTTVRLWDAADPSVSLQAYSGHTSH--VASLDFHPK 1090
Score = 35.4 bits (80), Expect = 0.088
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 112 FSPDGKVLASTHGDHTVKIIDC-ETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQE 170
F P+ LA++ D TV++ D + L+ GH + FHP + S + E
Sbjct: 950 FRPNSTQLATSSFDTTVRLWDAADPSVSLQAYSGHTSHVASLDFHPKKNDLFCSCDDNNE 1129
Query: 171 VRLWDANTSECITSHHFYRPIASIAFHAK-GEIIAVASGH 209
+R W+ + C + F + F + G ++A ASG+
Sbjct: 1130 IRFWNISQYSC--TRVFKGGSTQVRFQPRSGHLLAAASGN 1243
Score = 30.8 bits (68), Expect = 2.2
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = +2
Query: 112 FSP-DGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQE 170
F P G +LA+ G+ V + D ET R + L GH V + + LAS S +
Sbjct: 1199 FQPRSGHLLAAASGN-VVSLFDVETDRQMHSLQGHSGEVHCVCW-DTNGDYLASVS-QES 1369
Query: 171 VRLWDANTSECI----TSHHFYRPIASIAFHAKGEIIAVASGHK-LYIWH 215
V++W + +CI +S + + S FH + V G++ L +WH
Sbjct: 1370 VKVWSLASGDCIHELNSSGNMFH---SCVFHPSYSNLLVIGGYQSLELWH 1510
>TC88475 similar to GP|20260442|gb|AAM13119.1 unknown protein {Arabidopsis
thaliana}, partial (96%)
Length = 1315
Score = 40.8 bits (94), Expect = 0.002
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +3
Query: 109 AAAFSPDGKVLASTHGDHTVKIIDCETGRCLKV----LIGHMRTPWVVRFHPLHPKILAS 164
+ A++ G LAS D T +I + KV L GH + + + P HP ++A+
Sbjct: 216 SVAWNCIGTKLASGSVDQTARIWHIDPHAHGKVKDIELKGHTDSVDQLCWDPKHPDLIAT 395
Query: 165 GSLDQEVRLWDANTSECITSHHFYRPIASIAFHAKGEIIAVAS 207
S D+ VRLWDA + +C +I + G +AV +
Sbjct: 396 ASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHVAVGN 524
>TC80769 similar to GP|11141605|gb|AAG32022.1 LEUNIG {Arabidopsis thaliana},
partial (40%)
Length = 1362
Score = 40.8 bits (94), Expect = 0.002
Identities = 22/72 (30%), Positives = 34/72 (46%), Gaps = 1/72 (1%)
Frame = +3
Query: 112 FSPDGKVLASTHGDHTVKIIDCET-GRCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQE 170
FS LA++ D TV++ D + G L+ GH + + FHP ++ S D E
Sbjct: 516 FSASMPRLATSSFDKTVRVWDVDNPGYSLRTFTGHSTSVMSLDFHPNKDDLICSCDGDGE 695
Query: 171 VRLWDANTSECI 182
+R W N C+
Sbjct: 696 IRYWSINNGSCV 731
Score = 30.8 bits (68), Expect = 2.2
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = +3
Query: 116 GKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQEVRLWD 175
G+ LA+ ++ V I+D ET C L GH +T V + P ++LAS S D VR+W
Sbjct: 780 GRYLAAA-AENIVSILDVETQACRYSLKGHTKTIDSVCWDP-SGELLASVSED-SVRIWT 950
Query: 176 ANTSECI 182
EC+
Sbjct: 951 LE-GECV 968
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.320 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,631,606
Number of Sequences: 36976
Number of extensions: 403345
Number of successful extensions: 2160
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 2054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2135
length of query: 808
length of database: 9,014,727
effective HSP length: 104
effective length of query: 704
effective length of database: 5,169,223
effective search space: 3639132992
effective search space used: 3639132992
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Medicago: description of AC133341.5