BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC133139.2 + phase: 0 /pseudo
(155 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CB891859 similar to GP|6175165|gb| Mutator-like transposase {Ara... 49 1e-06
TC79804 weakly similar to GP|6175165|gb|AAF04891.1| Mutator-like... 46 5e-06
AL375901 similar to GP|9759134|dbj mutator-like transposase-like... 45 2e-05
TC90326 similar to GP|13775111|gb|AAK39132.1 bZIP transcription ... 32 0.079
TC86762 similar to SP|P54967|BIOB_ARATH Biotin synthase (EC 2.8.... 32 0.10
TC86954 similar to GP|11385433|gb|AAG34799.1 glutathione S-trans... 29 0.67
BG451959 homologue to GP|6175165|gb| Mutator-like transposase {A... 27 2.5
BF646436 weakly similar to GP|9828634|gb F1N21.5 {Arabidopsis th... 26 5.6
TC92824 similar to PIR|H86263|H86263 hypothetical protein AAD310... 26 5.6
TC76323 homologue to GP|12054507|emb|CAC20221. ribosomal protein... 26 5.6
TC81348 similar to GP|17979464|gb|AAL50069.1 At1g68530/T26J14_10... 26 7.4
TC79878 similar to GP|15485612|emb|CAC67408. insulin degrading e... 26 7.4
CA917564 26 7.4
TC87218 similar to GP|8778643|gb|AAF79651.1| F5O11.25 {Arabidops... 25 9.6
TC89125 similar to PIR|H86253|H86253 hypothetical protein [impor... 25 9.6
TC88417 similar to SP|Q40285|UFO2_MANES Flavonol 3-O-glucosyltra... 25 9.6
TC86955 similar to GP|11385433|gb|AAG34799.1 glutathione S-trans... 25 9.6
CA920463 weakly similar to GP|2852684|gb|A resistance protein ca... 25 9.6
BF519771 homologue to GP|7297246|gb| CG5177-PA {Drosophila melan... 25 9.6
>CB891859 similar to GP|6175165|gb| Mutator-like transposase {Arabidopsis
thaliana}, partial (27%)
Length = 625
Score = 48.5 bits (114), Expect = 1e-06
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +1
Query: 15 PDLGLISDRHESIKSVVRRLDSNWHHVFCIRHITQLFEDFQEHRDEEKSKKYGLNNINFL 74
P L ++SDR + I V H FC+RH++ F R E + +N L
Sbjct: 28 PRLTILSDRQQGIVDGVEANFPTAFHGFCMRHLSDSF------RKEFNNTML----VNLL 177
Query: 75 -PSGYSMTQPSITHYRNQIRDWSDDVVKWVDDNPKKQWLQAHDQGRRWGHITTNISECFN 133
+ +T +I + S D W+ P + W A+ +G R+GH+T NI E N
Sbjct: 178 WEAANCLTIIEFEGKVMEIEEISQDAAYWIRRVPPRLWATAYFEGHRFGHLTANIVEALN 357
Query: 134 N 134
+
Sbjct: 358 S 360
>TC79804 weakly similar to GP|6175165|gb|AAF04891.1| Mutator-like transposase
{Arabidopsis thaliana}, partial (57%)
Length = 2129
Score = 46.2 bits (108), Expect = 5e-06
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +1
Query: 15 PDLGLISDRHESIKSVVRRLDSNWHHVFCIRHITQ-LFEDFQEHRDEEKSKKYGLNNINF 73
P + +SD + I +RR H FC+RH+++ + ++F+ R I+
Sbjct: 946 PQIIFLSDGQKGIVDAIRRKFPRSSHAFCMRHLSENIGKEFKNSR-----------LIHL 1092
Query: 74 LPSG-YSMTQPSITHYRNQIRDWSDDVVKWVDDNPKKQWLQAHDQGRRWGHITTNISE 130
L S Y+ T + +I + S + W+ QW + +G R+GH+++NI E
Sbjct: 1093 LWSAAYATTINAFREKMAEIEEVSPNASMWLQHFHPSQWALVYFEGTRYGHLSSNIEE 1266
>AL375901 similar to GP|9759134|dbj mutator-like transposase-like protein
{Arabidopsis thaliana}, partial (27%)
Length = 493
Score = 44.7 bits (104), Expect = 2e-05
Identities = 29/95 (30%), Positives = 46/95 (47%)
Frame = +3
Query: 40 HVFCIRHITQLFEDFQEHRDEEKSKKYGLNNINFLPSGYSMTQPSITHYRNQIRDWSDDV 99
H FC+R++++ F RD K+ K L NI F + Y++T ++ + S DV
Sbjct: 24 HGFCLRYVSENF------RDTFKNTK--LVNI-FWNAVYALTAAEFESKITEMIEVSQDV 176
Query: 100 VKWVDDNPKKQWLQAHDQGRRWGHITTNISECFNN 134
+ W P W A+ G R+GH T ++E N
Sbjct: 177 ISWFQHFPPFLWAVAYFDGVRYGHFTLGVTELLYN 281
>TC90326 similar to GP|13775111|gb|AAK39132.1 bZIP transcription factor 6
{Phaseolus vulgaris}, partial (34%)
Length = 872
Score = 32.3 bits (72), Expect = 0.079
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = -2
Query: 36 SNWHHVFCIRHITQLFEDFQEHRDEEKSKKYGLNNINFLPSGYSMTQPSITHYRNQI 92
SN+ H+ ++ TQ + FQ ++D+EK +GL + S+T P++T +++
Sbjct: 709 SNFIHLLSLKSQTQNYHYFQHYQDQEKHHSFGLAS--------SLTTPALTKNSSKV 563
>TC86762 similar to SP|P54967|BIOB_ARATH Biotin synthase (EC 2.8.1.6)
(Biotin synthetase). [Mouse-ear cress] {Arabidopsis
thaliana}, partial (87%)
Length = 1555
Score = 32.0 bits (71), Expect = 0.10
Identities = 25/93 (26%), Positives = 38/93 (39%), Gaps = 1/93 (1%)
Frame = +1
Query: 58 RDEEKSKKYGLNNIN-FLPSGYSMTQPSITHYRNQIRDWSDDVVKWVDDNPKKQWLQAHD 116
R + +S + L + N F S + Q T DW+ D VK + D+P L
Sbjct: 289 RSQSRSSIWVLQHCNSFSTSSAAAIQAEKTIQNGPRNDWTKDEVKSIYDSPILDLLFHGA 468
Query: 117 QGRRWGHITTNISECFNNVLKGGPQSSNHTNCP 149
Q R H + +C +K G S + + CP
Sbjct: 469 QVHRHAHNFREVQQCTLLSVKTGGCSEDCSYCP 567
>TC86954 similar to GP|11385433|gb|AAG34799.1 glutathione S-transferase GST
9 {Glycine max}, partial (98%)
Length = 664
Score = 29.3 bits (64), Expect = 0.67
Identities = 15/41 (36%), Positives = 23/41 (55%), Gaps = 3/41 (7%)
Frame = +3
Query: 83 PSITHYRNQIRDWSDDVVKWVDDNPKKQWL---QAHDQGRR 120
PS + R Q R W D + K V D +K WL + H++G++
Sbjct: 309 PSDPYERAQARFWVDYIDKKVYDTWRKMWLSKGEEHEEGKK 431
>BG451959 homologue to GP|6175165|gb| Mutator-like transposase {Arabidopsis
thaliana}, partial (28%)
Length = 658
Score = 27.3 bits (59), Expect = 2.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 15 PDLGLISDRHESIKSVVRRLDSNWHHVFCIRHITQLF 51
P L ++SDR + I V H FC+RH++ F
Sbjct: 539 PRLTILSDRQQGIVDGVEANFPTAFHGFCMRHLSDNF 649
>BF646436 weakly similar to GP|9828634|gb F1N21.5 {Arabidopsis thaliana},
partial (11%)
Length = 659
Score = 26.2 bits (56), Expect = 5.6
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 54 FQEHRDEEKSKKYGLNNINFLPSGYSMTQPSITHYRNQIRDWSDDVVKWVDDNPK 108
F+ R E+ ++ LNNINFL + + H R+++ D D+N K
Sbjct: 466 FESRRLFEEKRESELNNINFLREVANRGMEEMKHQRSKLEREKQD----ADENRK 618
>TC92824 similar to PIR|H86263|H86263 hypothetical protein AAD31053.1
[imported] - Arabidopsis thaliana, partial (48%)
Length = 578
Score = 26.2 bits (56), Expect = 5.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 35 DSNWHHVFCIRHITQ 49
D+ WH FC RHI++
Sbjct: 404 DAGWHCSFCFRHISE 448
>TC76323 homologue to GP|12054507|emb|CAC20221. ribosomal protein L2
{Glycine max}, complete
Length = 1031
Score = 26.2 bits (56), Expect = 5.6
Identities = 19/68 (27%), Positives = 34/68 (49%), Gaps = 1/68 (1%)
Frame = -1
Query: 20 ISDRHESIKSVV-RRLDSNWHHVFCIRHITQLFEDFQEHRDEEKSKKYGLNNINFLPSGY 78
+ DR I + V ++L + W F +H ++ +++ +Y LNN+N L G+
Sbjct: 977 LQDRCNKI*NAV*QKLHNFWGKWFSKQH-----NSLTRNKIGKQAIEYNLNNLNCLFIGF 813
Query: 79 SMTQPSIT 86
S T S+T
Sbjct: 812 SSTCSSLT 789
>TC81348 similar to GP|17979464|gb|AAL50069.1 At1g68530/T26J14_10
{Arabidopsis thaliana}, partial (53%)
Length = 906
Score = 25.8 bits (55), Expect = 7.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 32 RRLDSNWHHVFCIRHITQLF 51
R + +W HVFC+R + F
Sbjct: 106 REIRQDWRHVFCLRKVLFFF 47
>TC79878 similar to GP|15485612|emb|CAC67408. insulin degrading enzyme
{Lycopersicon esculentum}, partial (32%)
Length = 1141
Score = 25.8 bits (55), Expect = 7.4
Identities = 7/29 (24%), Positives = 15/29 (51%)
Frame = -1
Query: 38 WHHVFCIRHITQLFEDFQEHRDEEKSKKY 66
WH C ++ +D Q+HR ++ + +
Sbjct: 370 WHKTACALENERVLQDHQDHRSNQRQRSW 284
>CA917564
Length = 656
Score = 25.8 bits (55), Expect = 7.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 121 WGHITTNISECFNNVLKGGPQSSNHTNCPGN 151
+G + + +C N +LKG P+ N C G+
Sbjct: 135 FGALI*TLGDCNNGLLKGSPEIVNECCCRGS 43
>TC87218 similar to GP|8778643|gb|AAF79651.1| F5O11.25 {Arabidopsis
thaliana}, partial (85%)
Length = 1557
Score = 25.4 bits (54), Expect = 9.6
Identities = 24/85 (28%), Positives = 35/85 (40%), Gaps = 16/85 (18%)
Frame = +3
Query: 59 DEEKSKKYGLNNINFLPSGYSMT----------------QPSITHYRNQIRDWSDDVVKW 102
D+ K+ Y + N NF + +T QP ITH R++ R +
Sbjct: 24 DQTKTICYYIYNNNFFHISFLLTFSCNGGSTNMDNKKNEQPKITHIRHK-RPITIRHTTN 200
Query: 103 VDDNPKKQWLQAHDQGRRWGHITTN 127
PKKQW+Q H Q + + T N
Sbjct: 201 TTK*PKKQWIQ-HQQQQPSNNFTYN 272
>TC89125 similar to PIR|H86253|H86253 hypothetical protein [imported] -
Arabidopsis thaliana, partial (70%)
Length = 1334
Score = 25.4 bits (54), Expect = 9.6
Identities = 11/24 (45%), Positives = 13/24 (53%)
Frame = +3
Query: 63 SKKYGLNNINFLPSGYSMTQPSIT 86
SK Y N F+PSGY P+ T
Sbjct: 996 SKDYFSNGAYFIPSGYGSCAPNYT 1067
>TC88417 similar to SP|Q40285|UFO2_MANES Flavonol 3-O-glucosyltransferase 2
(EC 2.4.1.91) (UDP-glucose flavonoid
3-O-glucosyltransferase 2), partial (47%)
Length = 828
Score = 25.4 bits (54), Expect = 9.6
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +3
Query: 97 DDVVKWVDDNP 107
DD++KW+DD P
Sbjct: 27 DDIIKWLDDQP 59
>TC86955 similar to GP|11385433|gb|AAG34799.1 glutathione S-transferase GST
9 {Glycine max}, complete
Length = 1065
Score = 25.4 bits (54), Expect = 9.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 83 PSITHYRNQIRDWSDDVVKWVDDNPKKQWLQAHDQ 117
PS + R Q R W D K V D KK WL ++
Sbjct: 391 PSDPYERAQARFWVDYSDKKVYDTWKKMWLSKGEE 495
>CA920463 weakly similar to GP|2852684|gb|A resistance protein candidate
{Lactuca sativa}, partial (6%)
Length = 810
Score = 25.4 bits (54), Expect = 9.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 95 WSDDVVKWVDDNPKKQWLQAHDQGRR 120
WS+D VKW++ K LQ D+G +
Sbjct: 726 WSEDRVKWIE---VKNLLQVGDEGSK 658
>BF519771 homologue to GP|7297246|gb| CG5177-PA {Drosophila melanogaster},
partial (61%)
Length = 593
Score = 25.4 bits (54), Expect = 9.6
Identities = 9/22 (40%), Positives = 15/22 (67%)
Frame = -2
Query: 67 GLNNINFLPSGYSMTQPSITHY 88
G++ +NF P GYS ++P + Y
Sbjct: 418 GISILNFFPDGYSTSKP*LPAY 353
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.318 0.135 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,640,592
Number of Sequences: 36976
Number of extensions: 102316
Number of successful extensions: 449
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of query: 155
length of database: 9,014,727
effective HSP length: 88
effective length of query: 67
effective length of database: 5,760,839
effective search space: 385976213
effective search space used: 385976213
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)
Medicago: description of AC133139.2