BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC131248.10 - phase: 0
(1039 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC86887 homologue to PIR|T10800|T10800 cellulose synthase (EC 2.... 1484 0.0
TC85693 similar to PIR|T05351|T05351 cellulose synthase (EC 2.4.... 1309 0.0
TC77631 similar to PIR|T51579|T51579 cellulose synthase catalyti... 1290 0.0
TC79809 homologue to GP|6446577|gb|AAD39534.2| cellulose synthas... 548 e-156
TC86230 homologue to GP|6446577|gb|AAD39534.2| cellulose synthas... 255 e-125
TC81720 similar to GP|8101699|gb|AAF72619.1| putative cellulose ... 409 e-114
TC82247 similar to PIR|T10797|T10797 cellulose synthase (EC 2.4.... 395 e-110
TC86229 homologue to GP|6446577|gb|AAD39534.2| cellulose synthas... 341 e-104
TC90826 homologue to GP|6446577|gb|AAD39534.2| cellulose synthas... 316 2e-95
BG644386 similar to PIR|T05351|T0 cellulose synthase (EC 2.4.1.-... 341 1e-93
TC80467 homologue to GP|18875454|gb|AAK11588.2 cellulose synthas... 337 1e-92
BM780101 similar to GP|9622890|gb cellulose synthase-9 {Zea mays... 317 2e-86
TC89697 similar to GP|4886756|gb|AAD32031.1| cellulose synthase ... 277 1e-85
BE203030 homologue to GP|13925881|g cellulose synthase catalytic... 298 7e-81
BG452180 similar to PIR|T10800|T10 cellulose synthase (EC 2.4.1.... 217 1e-76
TC79459 homologue to GP|6446577|gb|AAD39534.2| cellulose synthas... 268 8e-72
TC87399 similar to GP|17381168|gb|AAL36396.1 putative cellulose ... 268 8e-72
TC77822 weakly similar to GP|21536834|gb|AAM61166.1 unknown {Ara... 255 5e-68
AW695706 similar to GP|3511285|gb cellulose synthase {Populus x ... 242 6e-64
AW688489 similar to PIR|T10797|T10 cellulose synthase (EC 2.4.1.... 236 3e-62
>TC86887 homologue to PIR|T10800|T10800 cellulose synthase (EC 2.4.1.-)
catalytic chain celA2 - upland cotton (fragment), partial
(98%)
Length = 2463
Score = 1484 bits (3843), Expect = 0.0
Identities = 713/714 (99%), Positives = 713/714 (99%)
Frame = +3
Query: 326 PVEKVTCYVSDDGASMLLFDCLAETSEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDK 385
P EKVTCYVSDDGASMLLFDCLAETSEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDK
Sbjct: 12 PCEKVTCYVSDDGASMLLFDCLAETSEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDK 191
Query: 386 VEPTFVKERRSMKREYEEFKVKINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQV 445
VEPTFVKERRSMKREYEEFKVKINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQV
Sbjct: 192 VEPTFVKERRSMKREYEEFKVKINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQV 371
Query: 446 YLGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCD 505
YLGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCD
Sbjct: 372 YLGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCD 551
Query: 506 HYINNSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDG 565
HYINNSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDG
Sbjct: 552 HYINNSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDG 731
Query: 566 IQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPKWCCFCCGSRKTKSKKKSGTNG 625
IQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPKWCCFCCGSRKTKSKKKSGTNG
Sbjct: 732 IQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPKWCCFCCGSRKTKSKKKSGTNG 911
Query: 626 RSLFSRLYKKKKMGGKDYVRKGSGSMFDLEEIEEGLEGYEELEKSSLMSQKSFEKRFGQS 685
RSLFSRLYKKKKMGGKDYVRKGSGSMFDLEEIEEGLEGYEELEKSSLMSQKSFEKRFGQS
Sbjct: 912 RSLFSRLYKKKKMGGKDYVRKGSGSMFDLEEIEEGLEGYEELEKSSLMSQKSFEKRFGQS 1091
Query: 686 PVFIASTLMENGGLPEGTNTQSLVKEAIHNISCGYEEKTDWGKEIGWIYGSVTEDILTGF 745
PVFIASTLMENGGLPEGTNTQSLVKEAIHNISCGYEEKTDWGKEIGWIYGSVTEDILTGF
Sbjct: 1092 PVFIASTLMENGGLPEGTNTQSLVKEAIHNISCGYEEKTDWGKEIGWIYGSVTEDILTGF 1271
Query: 746 KMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKL 805
KMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKL
Sbjct: 1272 KMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKL 1451
Query: 806 KYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILT 865
KYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILT
Sbjct: 1452 KYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILT 1631
Query: 866 GVLELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAE 925
GVLELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAE
Sbjct: 1632 GVLELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAE 1811
Query: 926 FGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLY 985
FGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLY
Sbjct: 1812 FGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLY 1991
Query: 986 PFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQCGVEC 1039
PFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQCGVEC
Sbjct: 1992 PFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQCGVEC 2153
>TC85693 similar to PIR|T05351|T05351 cellulose synthase (EC 2.4.1.-)
catalytic chain RSW1 - Arabidopsis thaliana, partial
(79%)
Length = 3029
Score = 1309 bits (3387), Expect = 0.0
Identities = 631/899 (70%), Positives = 744/899 (82%), Gaps = 17/899 (1%)
Frame = +3
Query: 158 NEEWQERVEKWKVRQEKRGLL---NKEDGKEDQGE--------EDEYLMAEARQPLWRKV 206
N +W+ERVE WK++ EK + DGK G+ E+ ++ +ARQP+ R V
Sbjct: 3 NVDWKERVEGWKLKHEKNMVQMTGRYADGKSGGGDIEGTGSNGEELQMVDDARQPMSRIV 182
Query: 207 PIPSSLINPYRIVIIMRLVILAFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQFP 266
PI SS + PYR+VI+ RL++L FF ++R+ P DAYPLWL SVICEIWFA SWILDQFP
Sbjct: 183 PISSSQLTPYRVVIVFRLIVLGFFLQYRVTHPVKDAYPLWLTSVICEIWFAFSWILDQFP 362
Query: 267 KWLPITRETYLDRLSIRFEREGEPNQLSPVDVFVSSVDPLKEPPIITANTVLSILSVDYP 326
KW PI RETYL+RL+IR++R+GEP+QL+PVDVFVS+VDPLKEPPI+TANTVLSIL+VDYP
Sbjct: 363 KWSPINRETYLERLAIRYDRDGEPSQLAPVDVFVSTVDPLKEPPIVTANTVLSILAVDYP 542
Query: 327 VEKVTCYVSDDGASMLLFDCLAETSEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDKV 386
V+KV+CYVSDDG++ML F+ L+ET+EFA+ WVPFCKK+SIEPRAPE+YF +KIDYLKDKV
Sbjct: 543 VDKVSCYVSDDGSAMLSFEALSETAEFAKMWVPFCKKHSIEPRAPEFYFLQKIDYLKDKV 722
Query: 387 EPTFVKERRSMKREYEEFKVKINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQVY 446
+P+FVKERR+MKR+YEEFKV+INA VAKA K PEEGW MQDGTPWPGNN RDHPGMIQV+
Sbjct: 723 QPSFVKERRAMKRQYEEFKVRINAYVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVF 902
Query: 447 LGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDH 506
LG +G LD +G ELP+LVY+SREKRPG+ HHKKAGAMNAL+RVSAVLTN ++LN+DCDH
Sbjct: 903 LGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDH 1082
Query: 507 YINNSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGI 566
Y NNSKAL+EAMCF+MDP GKK CYVQFPQRFDGID HDRYANRN VFFDIN+KG DGI
Sbjct: 1083 YFNNSKALKEAMCFMMDPAYGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGQDGI 1262
Query: 567 QGPVYVGTGTVFNRQALYGYDPPVSEK--RPKMTC-DCWPKWCCFCCGSRKTKSKKKSGT 623
QGPVYVGTG FNRQALYGYDP ++E+ P + CW GSRK K K G
Sbjct: 1263 QGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCW--------GSRK---KGKGG- 1406
Query: 624 NGRSLFSRLYKKKKMGGKDYVRKGSGSMFDLEEIEEGLEGYEELEKSSLMSQKSFEKRFG 683
++ Y KK G K + + +F++E+IEEG+EGY++ E+S LMSQKS EKRFG
Sbjct: 1407 ------NKKYGDKKRGVKR--TESTIPIFNMEDIEEGVEGYDD-ERSLLMSQKSLEKRFG 1559
Query: 684 QSPVFIASTLMENGGLPEGTNTQSLVKEAIHNISCGYEEKTDWGKEIGWIYGSVTEDILT 743
QSPVFIA+T ME GGLP TN+ +L+KEAIH ISCGYE+KT+WGKEIGWIYGSVTEDILT
Sbjct: 1560 QSPVFIAATFMEQGGLPPSTNSTTLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILT 1739
Query: 744 GFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGG 803
GFKMH RGW SVYCMP RPAFKGSAPINLSDRL+QVLRWALGS+EIFLSRHCPLWYGY G
Sbjct: 1740 GFKMHARGWISVYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNG 1919
Query: 804 KLKYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISII 863
+++ L RLAY NTI+YPFTSIPLLAYC +PA CLLT KFIIP ++N AS+WF+ LF SI
Sbjct: 1920 RMRPLMRLAYINTIIYPFTSIPLLAYCVLPAFCLLTNKFIIPEISNFASMWFILLFTSIF 2099
Query: 864 LTGVLELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAAD- 922
T +LELRWSGV IEDWWRNEQFWVIGG SAHLFAVFQGLLKVLAG+DTNFTVT+KA D
Sbjct: 2100 TTSILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKANDE 2279
Query: 923 DAEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIV 982
D +F ELY+FKWT+LLIPPTT++I+N++G+VAGVS AINSG SWGPLFGKLFFA WVI
Sbjct: 2280 DGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSFAINSGYQSWGPLFGKLFFAIWVIA 2459
Query: 983 HLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFL--PKQTGPILKQCGVEC 1039
HLYPFLKGL+GK NRTPTIV++W++LLASIFSL+WVRIDPF+ P ++ QCG+ C
Sbjct: 2460 HLYPFLKGLLGKSNRTPTIVIVWAVLLASIFSLLWVRIDPFISDPNKSSS-NSQCGINC 2633
>TC77631 similar to PIR|T51579|T51579 cellulose synthase catalytic subunit
(IRX3) - Arabidopsis thaliana, partial (77%)
Length = 2694
Score = 1290 bits (3337), Expect = 0.0
Identities = 611/832 (73%), Positives = 701/832 (83%), Gaps = 2/832 (0%)
Frame = +1
Query: 210 SSLINPYRIVIIMRLVILAFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQFPKWL 269
SS INPYR+VI+ RLVIL FF R+R++ P +DA LWL S+ICEIWFA+SWILDQFPKW
Sbjct: 4 SSKINPYRMVIVARLVILGFFLRYRLMNPVHDAMGLWLTSIICEIWFAISWILDQFPKWY 183
Query: 270 PITRETYLDRLSIRFEREGEPNQLSPVDVFVSSVDPLKEPPIITANTVLSILSVDYPVEK 329
PI RETYLDRLS+R+EREGEPN L+PVDVFVS+VDPLKEPP+ TANTVLSIL++DYP++K
Sbjct: 184 PIDRETYLDRLSLRYEREGEPNMLAPVDVFVSTVDPLKEPPLNTANTVLSILAMDYPIDK 363
Query: 330 VTCYVSDDGASMLLFDCLAETSEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDKVEPT 389
++CY+SDDGASM F+ L+ET+EFAR+WVPFCKK+ IEPRAPE YF+EKIDYLKDKV+PT
Sbjct: 364 ISCYISDDGASMCTFEALSETAEFARKWVPFCKKFLIEPRAPEMYFSEKIDYLKDKVQPT 543
Query: 390 FVKERRSMKREYEEFKVKINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGS 449
FVKERRSMKREYEEFKV+INALVAKA K P GW+MQDGTPWPGNNT+DHPGMIQV+LG
Sbjct: 544 FVKERRSMKREYEEFKVRINALVAKAQKVPAGGWIMQDGTPWPGNNTKDHPGMIQVFLGH 723
Query: 450 AGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYIN 509
+G D EG +LP+LVY+SREKRPG+ HHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYIN
Sbjct: 724 SGGHDSEGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYIN 903
Query: 510 NSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGP 569
NSKA+REAMCFLMDPQ GKK+CYVQFPQRFDGID HDRYANRNTVFFDINMKGLDGIQGP
Sbjct: 904 NSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDAHDRYANRNTVFFDINMKGLDGIQGP 1083
Query: 570 VYVGTGTVFNRQALYGYDPPVSEKRPKM-TCDCWPKWCCFCCGSRKTKSKKKSGTNGRSL 628
VYVGTG VF RQALYGY+PP KRPKM +CD CC C G RK + NG +
Sbjct: 1084 VYVGTGCVFRRQALYGYNPPKGPKRPKMVSCD-----CCPCFGRRKKVKHAMNDANGEA- 1245
Query: 629 FSRLYKKKKMGGKDYVRKGSGSMFDLEEIEEGLEGYEELEKSSLMSQKSFEKRFGQSPVF 688
GL G E+ +K LMSQ +FEK+FGQS +F
Sbjct: 1246 ------------------------------AGLRGMED-DKELLMSQMNFEKKFGQSSIF 1332
Query: 689 IASTLMENGGLPEGTNTQSLVKEAIHNISCGYEEKTDWGKEIGWIYGSVTEDILTGFKMH 748
+ S LME GG+P ++ S +KEAIH ISCGYE+KT+WG E+GWIYGS+TEDILTGFKMH
Sbjct: 1333 VTSVLMEEGGVPPSSSPASQLKEAIHVISCGYEDKTEWGIELGWIYGSITEDILTGFKMH 1512
Query: 749 CRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGY-GGKLKY 807
CRGW+S+YCMPKR AFKG+APINLSDRL+QVLRWALGS+EIF S HCPLWYG+ GKLK+
Sbjct: 1513 CRGWRSIYCMPKRVAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGHKEGKLKW 1692
Query: 808 LERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGV 867
LER AY NT VYPFTSIPL+AYC +PAVCLLT KFI+P ++ AS++F+ALF SI+ TG+
Sbjct: 1693 LERFAYANTTVYPFTSIPLVAYCILPAVCLLTDKFIMPPISTFASLYFVALFSSIMATGI 1872
Query: 868 LELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFG 927
LEL+WSGV+IE+WWRNEQFWVIGGVSAHLFAV QGLLKVLAG+DTNFTVT+KA DD EFG
Sbjct: 1873 LELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEEFG 2052
Query: 928 ELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLYPF 987
ELY KWTTLLIPPTT++I+NIVGVVAG+SDAIN+G SWGPLFGKLFF+FWVIVHLYPF
Sbjct: 2053 ELYAIKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPF 2232
Query: 988 LKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQCGVEC 1039
LKGLMG+QNRTPTIVV+WS+LLASIFSL+WVRIDPF+ K GP K CG+ C
Sbjct: 2233 LKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKLCGINC 2388
>TC79809 homologue to GP|6446577|gb|AAD39534.2| cellulose synthase catalytic
subunit {Gossypium hirsutum}, partial (29%)
Length = 1139
Score = 548 bits (1412), Expect = e-156
Identities = 250/314 (79%), Positives = 286/314 (90%), Gaps = 1/314 (0%)
Frame = +1
Query: 727 GKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGS 786
G EIGWIYGSVTEDILTGFKMH RGW+S+YCMPKRPAFKGSAPINLSDRL+QVLRWALGS
Sbjct: 19 GTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGS 198
Query: 787 VEIFLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPT 846
VEI SRHCP+WYGYGG+LK+LER AY NT +YP T+IPLL YCT+PAVCLLT KFIIP
Sbjct: 199 VEILFSRHCPIWYGYGGRLKWLERFAYINTTIYPVTAIPLLMYCTLPAVCLLTNKFIIPQ 378
Query: 847 LTNLASVWFMALFISIILTGVLELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGLLKV 906
++NLAS+WF++LF+SI TG+LE+RWSGV I++WWRNEQFWVIGGVSAHLFAVFQGLLKV
Sbjct: 379 ISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKV 558
Query: 907 LAGVDTNFTVTAKAAD-DAEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINSGSG 965
LAG+DTNFTVT+KA+D D + ELY+ KWTTLLIPPTTL+I+N+VGVVAG+S AINSG
Sbjct: 559 LAGIDTNFTVTSKASDEDGDSAELYMIKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQ 738
Query: 966 SWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLP 1025
SWGPLFGKLFFAFWVIVHLYPFLKGLMG+QNRTPTIVV+WSILLASIFSL+WVR+DPF
Sbjct: 739 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTT 918
Query: 1026 KQTGPILKQCGVEC 1039
+ TGP ++CG+ C
Sbjct: 919 RVTGPKAEECGINC 960
>TC86230 homologue to GP|6446577|gb|AAD39534.2| cellulose synthase catalytic
subunit {Gossypium hirsutum}, partial (29%)
Length = 984
Score = 255 bits (652), Expect(3) = e-125
Identities = 123/174 (70%), Positives = 144/174 (82%), Gaps = 2/174 (1%)
Frame = +2
Query: 329 KVTCYVSDDGASMLLF--DCLAETSEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDKV 386
+ +CYVSDDGA+ML+ C TS KKY+IEPRAPE+YF +KIDYLKDKV
Sbjct: 452 RCSCYVSDDGAAMLII*SSC*NITS-LQENGFHSPKKYNIEPRAPEWYFAQKIDYLKDKV 628
Query: 387 EPTFVKERRSMKREYEEFKVKINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQVY 446
+ +FVK+RR+MKREYEEFK++IN LVAKA K PEEGWVMQDGTPWPGNN RDHPGMIQV+
Sbjct: 629 QTSFVKDRRAMKREYEEFKIRINGLVAKATKVPEEGWVMQDGTPWPGNNVRDHPGMIQVF 808
Query: 447 LGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFML 500
LG +G LD +G ELP+LVY+SREKRPG+ HHKKAGAMNALVRVSAVLTN PF++
Sbjct: 809 LGQSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLI 970
Score = 211 bits (538), Expect(3) = e-125
Identities = 97/141 (68%), Positives = 119/141 (83%)
Frame = +3
Query: 182 DGKEDQGEEDEYLMAEARQPLWRKVPIPSSLINPYRIVIIMRLVILAFFFRFRILTPAYD 241
DG+ D +D L EARQPL RKV IPSS INPYR+VI++RLV+L F +R+ P +
Sbjct: 9 DGRSDVLADDSLLNDEARQPLSRKVSIPSSRINPYRLVIVLRLVVLCIFLHYRLTNPVRN 188
Query: 242 AYPLWLISVICEIWFALSWILDQFPKWLPITRETYLDRLSIRFEREGEPNQLSPVDVFVS 301
AY LWL+SVICEIWFA+SWILDQFPKWLP+ RETYLDRL++R++REGEP+QL+ VD+FVS
Sbjct: 189 AYALWLVSVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVS 368
Query: 302 SVDPLKEPPIITANTVLSILS 322
+VDPLKEPP++TANTVLSILS
Sbjct: 369 TVDPLKEPPLVTANTVLSILS 431
Score = 21.6 bits (44), Expect(3) = e-125
Identities = 7/8 (87%), Positives = 8/8 (99%)
Frame = +3
Query: 497 PFMLNLDC 504
PF+LNLDC
Sbjct: 960 PFLLNLDC 983
>TC81720 similar to GP|8101699|gb|AAF72619.1| putative cellulose synthase
catalytic subunit {Gossypium hirsutum}, partial (36%)
Length = 605
Score = 409 bits (1051), Expect = e-114
Identities = 187/188 (99%), Positives = 188/188 (99%)
Frame = +2
Query: 1 MAGLITGSNSHFSHDSDEHKPPPANKSSSKICRVCGDEIGYKENGELFVACHVCAFPVCK 60
MAGLITGSNSHFSHDSDEHKPPPANKSSSKICRVCGDEIGYKENGELFVACHVCAFPVCK
Sbjct: 41 MAGLITGSNSHFSHDSDEHKPPPANKSSSKICRVCGDEIGYKENGELFVACHVCAFPVCK 220
Query: 61 PCYEYERSEGNQCCPQCNSRYKRHKGCPRVVGDEDENLDGDDFEDEFPVKNHHDDLDQNR 120
PCYEYERSEGNQCCPQCNSRYKRHKGCPRVVGDEDENLDGDDFEDEFPVKNHHDDLDQNR
Sbjct: 221 PCYEYERSEGNQCCPQCNSRYKRHKGCPRVVGDEDENLDGDDFEDEFPVKNHHDDLDQNR 400
Query: 121 DVNHVESVDYNQQKLHTFSSAGSVTGKDLEGEKEFYSNEEWQERVEKWKVRQEKRGLLNK 180
DVNHVESVDYNQQKLHTFSSAGSVTGKDLEGEKEFYSNEEWQERVEKWKVRQEKRGLLNK
Sbjct: 401 DVNHVESVDYNQQKLHTFSSAGSVTGKDLEGEKEFYSNEEWQERVEKWKVRQEKRGLLNK 580
Query: 181 EDGKEDQG 188
EDGKED+G
Sbjct: 581 EDGKEDKG 604
>TC82247 similar to PIR|T10797|T10797 cellulose synthase (EC 2.4.1.-)
catalytic chain celA1 - upland cotton, partial (25%)
Length = 965
Score = 395 bits (1016), Expect = e-110
Identities = 188/237 (79%), Positives = 213/237 (89%), Gaps = 1/237 (0%)
Frame = +1
Query: 799 YGY-GGKLKYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMA 857
YG+ GG+LK L+RLAY NTIVYPFTS+PL+AYCT+PA+CLLTGKFIIPTL+N+AS F+
Sbjct: 1 YGFAGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNIASALFLG 180
Query: 858 LFISIILTGVLELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVT 917
LFISIILT VLELRWSGV IED WRNEQFWVIGGVSAHLFAVFQG LK+LAGVDTNFTVT
Sbjct: 181 LFISIILTSVLELRWSGVTIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVT 360
Query: 918 AKAADDAEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINSGSGSWGPLFGKLFFA 977
AKAADDAEFGELY+ KWTTLLIPPT+LII+N+VGVVAG SDA+N G SWGPL GK+FFA
Sbjct: 361 AKAADDAEFGELYMIKWTTLLIPPTSLIIINLVGVVAGFSDALNGGYESWGPLIGKVFFA 540
Query: 978 FWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 1034
FWVI HLYPFLKGLMG+QNRTPTIV+LWS+LLAS+FSLIWV+I+PF+ K + Q
Sbjct: 541 FWVIFHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSLIWVKINPFVSKVDSSAISQ 711
>TC86229 homologue to GP|6446577|gb|AAD39534.2| cellulose synthase catalytic
subunit {Gossypium hirsutum}, partial (22%)
Length = 739
Score = 341 bits (875), Expect(2) = e-104
Identities = 155/192 (80%), Positives = 176/192 (90%)
Frame = +1
Query: 375 FNEKIDYLKDKVEPTFVKERRSMKREYEEFKVKINALVAKALKKPEEGWVMQDGTPWPGN 434
F K+ LKDKV+ +FVK+RR+MKREYEEFK+++ LVAKA+K PEEGWVMQDGTPWPGN
Sbjct: 19 FQRKLTTLKDKVQASFVKDRRAMKREYEEFKIRVXGLVAKAVKVPEEGWVMQDGTPWPGN 198
Query: 435 NTRDHPGMIQVYLGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLT 494
NTRDHPGMIQV+LG +G LD +G ELP+LVY+SREKRPG+ HHKKAGAMNALVRVSAVLT
Sbjct: 199 NTRDHPGMIQVFLGQSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLT 378
Query: 495 NAPFMLNLDCDHYINNSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTV 554
N PF+LNLDCDHYINNSKALREAMCF+MDP LGK +CYVQFPQRFDGIDR+DRYANRNTV
Sbjct: 379 NGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYANRNTV 558
Query: 555 FFDINMKGLDGI 566
FFDIN++GLDGI
Sbjct: 559 FFDINLRGLDGI 594
Score = 57.0 bits (136), Expect(2) = e-104
Identities = 29/59 (49%), Positives = 32/59 (54%)
Frame = +2
Query: 561 KGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPKWCCFCCGSRKTKSKK 619
+G QGPVYVGTG VFNR ALYGYDPP+ K K P CG + K K
Sbjct: 578 EGWMAFQGPVYVGTGCVFNRTALYGYDPPIKPKHKK------PSLVSSLCGGDRNKELK 736
>TC90826 homologue to GP|6446577|gb|AAD39534.2| cellulose synthase catalytic
subunit {Gossypium hirsutum}, partial (20%)
Length = 702
Score = 316 bits (810), Expect(2) = 2e-95
Identities = 141/201 (70%), Positives = 170/201 (84%), Gaps = 1/201 (0%)
Frame = +2
Query: 699 LPEGTNTQSLVKEAIHNISCGYEEKTDWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCM 758
+P+ ++L+KEAIH ISCGYE+K++WG EIGWIYGSVTEDILTGFKMH RGW+S+YCM
Sbjct: 95 VPQSATPETLLKEAIHVISCGYEDKSEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCM 274
Query: 759 PKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERLAYTNT-I 817
PK AFKGSAPINLSDRL+QVLRWALGSVEI LSRHCP+WYGY G+LK+L + T T
Sbjct: 275 PKLAAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYSGRLKWL*EVLRT*TPP 454
Query: 818 VYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVAI 877
+YP TSIPLL YCT+PAVCLLT KFIIP + N+AS+W ++LF+SI TG+L ++WSGV I
Sbjct: 455 IYPITSIPLLMYCTLPAVCLLTNKFIIPQIXNIASIWVISLFLSIFATGILXMKWSGVGI 634
Query: 878 EDWWRNEQFWVIGGVSAHLFA 898
++WW+NEQFW IGG S HLFA
Sbjct: 635 DEWWKNEQFWXIGGGSXHLFA 697
Score = 53.1 bits (126), Expect(2) = 2e-95
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1
Query: 668 EKSSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGTNTQS 707
EKS LMSQ S E+RFGQS VF+ASTLMENGG N+++
Sbjct: 1 EKSLLMSQMSLERRFGQSAVFVASTLMENGGXSSVCNSRN 120
>BG644386 similar to PIR|T05351|T0 cellulose synthase (EC 2.4.1.-) catalytic
chain RSW1 - Arabidopsis thaliana, partial (19%)
Length = 658
Score = 341 bits (874), Expect = 1e-93
Identities = 155/219 (70%), Positives = 193/219 (87%)
Frame = +1
Query: 210 SSLINPYRIVIIMRLVILAFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQFPKWL 269
SS + PYR+VII+RL+IL FF ++R+ P DAYPLWL+SVICE+WFALSW+LDQFPKW
Sbjct: 4 SSHLTPYRVVIILRLIILGFFMQYRLTHPVNDAYPLWLVSVICEVWFALSWLLDQFPKWS 183
Query: 270 PITRETYLDRLSIRFEREGEPNQLSPVDVFVSSVDPLKEPPIITANTVLSILSVDYPVEK 329
P+ RET+LDRL++R +REGEP+QL+PVDVFVS+VDPLKEPP+ITANTVLSIL+VDYPV+K
Sbjct: 184 PVNRETFLDRLALRHDREGEPSQLAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDK 363
Query: 330 VTCYVSDDGASMLLFDCLAETSEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDKVEPT 389
V+CYVSDDG++ML F+ L+ET+EFARRWVPFCKK+SIEPRAPE+YF +KIDYLKDKV+P+
Sbjct: 364 VSCYVSDDGSAMLTFEALSETAEFARRWVPFCKKFSIEPRAPEFYFAQKIDYLKDKVQPS 543
Query: 390 FVKERRSMKREYEEFKVKINALVAKALKKPEEGWVMQDG 428
FVKER++MKREYEEFK ++ L+ + K W MQDG
Sbjct: 544 FVKERKAMKREYEEFKY-VSMLLLQKHKNA*RSWTMQDG 657
>TC80467 homologue to GP|18875454|gb|AAK11588.2 cellulose synthase CesA-1
{Zinnia elegans}, partial (26%)
Length = 810
Score = 337 bits (864), Expect = 1e-92
Identities = 155/210 (73%), Positives = 186/210 (87%)
Frame = +3
Query: 270 PITRETYLDRLSIRFEREGEPNQLSPVDVFVSSVDPLKEPPIITANTVLSILSVDYPVEK 329
PI R + DRLS RFEREGEP QL+PVD FVS+VDPLKEPP+ITANTVLSIL+VDYPVEK
Sbjct: 6 PINRVAFTDRLSARFEREGEPCQLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEK 185
Query: 330 VTCYVSDDGASMLLFDCLAETSEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDKVEPT 389
V+CYVSDDGA+ML F+ L ET++FAR+WVPFCKK+ IEPRAPE+YF++KIDYLKDKV+P+
Sbjct: 186 VSCYVSDDGAAMLTFESLVETADFARKWVPFCKKFEIEPRAPEFYFSQKIDYLKDKVQPS 365
Query: 390 FVKERRSMKREYEEFKVKINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGS 449
FVKERR+MKREYEE+KV++NALVAKA K P+EGW MQDGT WPGNN+RDHPGMIQV+LG
Sbjct: 366 FVKERRAMKREYEEYKVRVNALVAKAQKTPDEGWTMQDGTSWPGNNSRDHPGMIQVFLGH 545
Query: 450 AGALDVEGKELPKLVYISREKRPGYPHHKK 479
+GA D+EG ELP+LVY+SR ++ P +K
Sbjct: 546 SGAHDIEGNELPRLVYVSRREKARLPTPQK 635
Score = 102 bits (254), Expect = 8e-22
Identities = 46/52 (88%), Positives = 50/52 (95%)
Frame = +1
Query: 469 EKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKALREAMCF 520
EKRPGY HHKKAGA NALVRVSAVLTNAP++LNLDCDHY+NNSKA+REAMCF
Sbjct: 604 EKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCF 759
>BM780101 similar to GP|9622890|gb cellulose synthase-9 {Zea mays}, partial
(20%)
Length = 709
Score = 317 bits (812), Expect = 2e-86
Identities = 144/236 (61%), Positives = 188/236 (79%), Gaps = 3/236 (1%)
Frame = +1
Query: 774 DRLHQVLRWALGSVEIFLSRHCPLWYGYG-GKLKYLERLAYTNTIVYPFTSIPLLAYCTI 832
+RL+QVLRWA+GS+EI S HCP+WYG+ G+LK L+R+AY N+ VYPF+++PL+ YC +
Sbjct: 1 ERLNQVLRWAVGSLEILFSHHCPIWYGFKEGRLKLLQRIAYINSTVYPFSALPLIIYCIV 180
Query: 833 PAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVAIEDWWRNEQFWVIGGV 892
PAVCLLT KFI P++ AS+ F++LFISI + +LELRWSGV++E+WWRN+QFWVIG +
Sbjct: 181 PAVCLLTDKFITPSVGTFASLVFISLFISIFASSILELRWSGVSLEEWWRNQQFWVIGSI 360
Query: 893 SAHLFAVFQGLL-KVLAGVDTNFTVTAKAA-DDAEFGELYLFKWTTLLIPPTTLIILNIV 950
SAHLFA+ QGL+ + L + +F + +KA DD EF ELY +WT LLIPPTT+ I NI+
Sbjct: 361 SAHLFAIVQGLMGRFLGRFNAHFNIVSKAPDDDGEFNELYTIRWTVLLIPPTTVTIFNII 540
Query: 951 GVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWS 1006
G+VAG +DAINSG WG L GKLFF+ WVI HLYPF GLMG+QNRTPT+VV+W+
Sbjct: 541 GIVAGFTDAINSGEHEWGALIGKLFFSSWVIAHLYPFP*GLMGRQNRTPTLVVIWA 708
>TC89697 similar to GP|4886756|gb|AAD32031.1| cellulose synthase catalytic
subunit {Arabidopsis thaliana}, partial (26%)
Length = 1011
Score = 277 bits (708), Expect(2) = 1e-85
Identities = 141/315 (44%), Positives = 196/315 (61%), Gaps = 4/315 (1%)
Frame = +2
Query: 2 AGLITGS--NSHFSHDSDEHKPPPANKSSSKICRVCGDEIGYKENGELFVACHVCAFPVC 59
+GL GS ++ +++P + C +CGD +G G+LFVAC C FPVC
Sbjct: 17 SGLFAGSLNSNELVVIQKQNEPKAVKNLDGQDCEICGDSVGRTVEGDLFVACEECGFPVC 196
Query: 60 KPCYEYERSEGNQCCPQCNSRYKRHKGCPRVVGDEDENLDGDDFEDEFPVKNHHDDLDQN 119
+PCYEYER EG+Q CPQC++RYKR KG PRV GDEDE D DD E EF ++ L
Sbjct: 197 RPCYEYERKEGSQNCPQCHTRYKRIKGSPRVEGDEDEE-DVDDIEQEFKMEEEKYKLMHQ 373
Query: 120 RDVNHVESVD--YNQQKLHTFSSAGSVTGKDLEGEKEFYSNEEWQERVEKWKVRQEKRGL 177
++N ++ D Y +Q L++ S G G L+ + E+ ++WK ++ L
Sbjct: 374 DNMNSIDDDDTKYREQPLYSHS-IGENYGAKLDNK----------EKTDEWK---QQGNL 511
Query: 178 LNKEDGKEDQGEEDEYLMAEARQPLWRKVPIPSSLINPYRIVIIMRLVILAFFFRFRILT 237
L + D + + + + E RQPL RKV IPS ++PYR++++ RL++L FF +RI
Sbjct: 512 LIETDAVDPE----KAMKDETRQPLSRKVAIPSGRLSPYRMMVVARLILLLLFFEYRISH 679
Query: 238 PAYDAYPLWLISVICEIWFALSWILDQFPKWLPITRETYLDRLSIRFEREGEPNQLSPVD 297
P DA LW ISV CEIW ALSWI+DQ PKW PI RETYLDRLS+RFE E +PN SP+D
Sbjct: 680 PVPDAIGLWFISVSCEIWLALSWIVDQIPKWFPIDRETYLDRLSVRFEPENKPNMPSPID 859
Query: 298 VFVSSVDPLKEPPII 312
+F+++ DP+KEPP++
Sbjct: 860 IFITTADPIKEPPLV 904
Score = 59.3 bits (142), Expect(2) = 1e-85
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +3
Query: 311 IITANTVLSILSVDYPVEKVTCYVSDDGASMLLFDCL 347
+ TANTVLSIL++DYP K++CYVSDDGASML F+ L
Sbjct: 900 LCTANTVLSILALDYPANKISCYVSDDGASMLTFEAL 1010
>BE203030 homologue to GP|13925881|g cellulose synthase catalytic subunit
{Nicotiana alata}, partial (15%)
Length = 521
Score = 298 bits (763), Expect = 7e-81
Identities = 136/173 (78%), Positives = 150/173 (86%)
Frame = +3
Query: 442 MIQVYLGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLN 501
MIQV+LG G D+ G ELP+LVY SREKRPG+ HHKKAGAMNALVRVSAV++NAP+MLN
Sbjct: 3 MIQVFLGQNGVRDIYGNELPRLVYGSREKRPGFEHHKKAGAMNALVRVSAVISNAPYMLN 182
Query: 502 LDCDHYINNSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMK 561
+DCDHYINNSKALREAMCF+MDP GKK+CYVQFPQRFDGIDRHDRY+NRN VFFDINMK
Sbjct: 183 VDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMK 362
Query: 562 GLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPKWCCFCCGSRK 614
GLDGIQGP+YVGTG VF RQALYGYD P +K P TC+ WPKWC CGSRK
Sbjct: 363 GLDGIQGPIYVGTGCVFMRQALYGYDAPAKKKPPGKTCNWWPKWCFMWCGSRK 521
>BG452180 similar to PIR|T10800|T10 cellulose synthase (EC 2.4.1.-) catalytic
chain celA2 - upland cotton (fragment), partial (24%)
Length = 586
Score = 217 bits (553), Expect(3) = 1e-76
Identities = 98/122 (80%), Positives = 110/122 (89%)
Frame = +2
Query: 776 LHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTIPAV 835
LHQVL+WALG+ +IF S +CPLWYGY GKLK+L+RLAY N IVYPF+SIPLL YCTIPA+
Sbjct: 2 LHQVLKWALGATQIFFSGYCPLWYGYSGKLKWLQRLAYMNAIVYPFSSIPLLVYCTIPAI 181
Query: 836 CLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVAIEDWWRNEQFWVIGGVSAH 895
CLLTGKFI+PTLT+LAS+W M LFISIILT VLELRWS V I+DWWRNEQFWVIGGVSAH
Sbjct: 182 CLLTGKFILPTLTSLASIWLMTLFISIILTCVLELRWSKVNIQDWWRNEQFWVIGGVSAH 361
Query: 896 LF 897
LF
Sbjct: 362 LF 367
Score = 73.6 bits (179), Expect(3) = 1e-76
Identities = 36/51 (70%), Positives = 43/51 (83%)
Frame = +3
Query: 897 FAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPTTLIIL 947
FAVFQGLLKV AG DT+F V K+ADD FG+L+LFKWTTLLIPPT+++ L
Sbjct: 366 FAVFQGLLKV-AGRDTSFAVRTKSADDTAFGQLHLFKWTTLLIPPTSIVNL 515
Score = 36.6 bits (83), Expect(3) = 1e-76
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +1
Query: 946 ILNIVGVVAGVSDAINSGSGSWGPL 970
ILN++G+ A VS+AINSG SWG L
Sbjct: 511 ILNMIGIXAXVSEAINSGYNSWGLL 585
>TC79459 homologue to GP|6446577|gb|AAD39534.2| cellulose synthase catalytic
subunit {Gossypium hirsutum}, partial (14%)
Length = 781
Score = 268 bits (685), Expect = 8e-72
Identities = 126/157 (80%), Positives = 143/157 (90%), Gaps = 1/157 (0%)
Frame = +1
Query: 884 EQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAAD-DAEFGELYLFKWTTLLIPPT 942
EQFWVIGGVSAHLFAVFQGLLKVLAG+DTNFTVT+KA+D D + ELY+FKWTTLLIPPT
Sbjct: 1 EQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDSAELYMFKWTTLLIPPT 180
Query: 943 TLIILNIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIV 1002
TL+I+N+VGVVAG+S A+NSG SWGPLFGKLFFAFWVI+HLYPFLKGLMG+QNRTPTIV
Sbjct: 181 TLLIINLVGVVAGISYAVNSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIV 360
Query: 1003 VLWSILLASIFSLIWVRIDPFLPKQTGPILKQCGVEC 1039
V+WSILLASIFSL+WVRIDPF + TGP + CG+ C
Sbjct: 361 VVWSILLASIFSLLWVRIDPFTTRVTGPKSEMCGINC 471
>TC87399 similar to GP|17381168|gb|AAL36396.1 putative cellulose synthase
catalytic subunit {Arabidopsis thaliana}, partial (53%)
Length = 1829
Score = 268 bits (685), Expect = 8e-72
Identities = 143/384 (37%), Positives = 225/384 (58%), Gaps = 14/384 (3%)
Frame = +3
Query: 216 YRIVIIMRLVILAFFFRFR---ILTPAYDAYP------LWLISVICEIWFALSWILDQFP 266
YR+ I ++F + +R I+T Y +W + E+WF W L Q
Sbjct: 102 YRLFSISLFTAISFIWLYRFNHIITTNYTQQEEDGGKLVWFGMLAAELWFGFYWFLTQAF 281
Query: 267 KWLPITRETYLDRLSIRFEREGEPNQLSPVDVFVSSVDPLKEPPIITANTVLSILSVDYP 326
+W + R+ + DRLS R+E + L VD+FV + DP EPP++ NTVLS+++ DYP
Sbjct: 282 RWNLVFRQPFKDRLSQRYE-----HMLPEVDIFVCTADPEIEPPMMVINTVLSVMAFDYP 446
Query: 327 VEKVTCYVSDDGASMLLFDCLAETSEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDKV 386
EK++ Y+SDDG S + F L E + FA+ W+PFCK++ +EPR+P YFN +KD
Sbjct: 447 SEKLSVYLSDDGGSEITFYALLEAATFAKHWLPFCKRFKVEPRSPAAYFNG----IKDT- 611
Query: 387 EPTFVKERRSMKREYEEFKVKINALVAKALKKPEEGWVMQDG-TPWPG-NNTRDHPGMIQ 444
E ++K+ Y E + +I K + P+E + G + W ++ RDH ++Q
Sbjct: 612 --NIANELVAIKKLYNEMEKRIED-ATKLKRGPQEARLKHKGFSQWDSYSSKRDHDTILQ 782
Query: 445 VYLGSA---GALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLN 501
+ L + DV G LP LVY++REKRP Y H+ KAGAMN+L+RVS++++N +LN
Sbjct: 783 ILLHKKDHDNSKDVHGFMLPTLVYLAREKRPQYHHNYKAGAMNSLLRVSSIISNGKVILN 962
Query: 502 LDCDHYINNSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMK 561
+DCD Y NNS+++R+++C+ MD + G ++ +VQ PQ F+ + ++D YA+ ++
Sbjct: 963 VDCDMYSNNSESIRDSLCYFMDEEKGHEIAFVQSPQAFENVTKNDLYASALLAIAEVEFH 1142
Query: 562 GLDGIQGPVYVGTGTVFNRQALYG 585
G DG GP+Y+GTG R++L G
Sbjct: 1143GADGCGGPLYIGTGCFHKRESLCG 1214
Score = 104 bits (260), Expect = 2e-22
Identities = 53/132 (40%), Positives = 73/132 (55%)
Frame = +3
Query: 717 SCGYEEKTDWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRL 776
SC YEE T WGKE+G YG ED++TG + GWKSVY P R AF G AP +L L
Sbjct: 1317 SCSYEENTQWGKEMGLKYGCPVEDVITGLSIQSNGWKSVYYNPARKAFLGVAPTSLLQVL 1496
Query: 777 HQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTIPAVC 836
Q RW+ G +I S++ P WY + GK+ ++ Y ++ + L Y IP++
Sbjct: 1497 IQHKRWSEGDFQILFSKYSPAWYAF-GKINLSLQMGYCAYCLWAPNCLATLFYSIIPSLY 1673
Query: 837 LLTGKFIIPTLT 848
LL G + P +T
Sbjct: 1674 LLKGIPLFPKVT 1709
>TC77822 weakly similar to GP|21536834|gb|AAM61166.1 unknown {Arabidopsis
thaliana}, partial (33%)
Length = 2391
Score = 255 bits (652), Expect = 5e-68
Identities = 149/400 (37%), Positives = 224/400 (55%), Gaps = 9/400 (2%)
Frame = +2
Query: 195 MAEARQPLWRKVPIPSSLINPYRIVIIMRLVILAFFFRFRILTPAYDAY----PL--WLI 248
M E PL + + SL+ R+ I+ + L F +R+ D+ PL +L+
Sbjct: 11 MEEETLPL-SVIHVNKSLVFINRLHTILHSIALCFLVYYRLCFFFQDSKTRETPLLPYLL 187
Query: 249 SVICEIWFALSWILDQFPKWLPITRETYLDRLSIRFEREGEPNQLSPVDVFVSSVDPLKE 308
EI + WI DQ +W PI R + +RL E ++L +DVF+ + DP KE
Sbjct: 188 VFSSEIVLSFIWIFDQAFRWNPIKRTVFPERLP-------ENDKLPNIDVFICTADPTKE 346
Query: 309 PPIITANTVLSILSVDYPVEKVTCYVSDDGASMLLFDCLAETSEFARRWVPFCKKYSIEP 368
P + NTVLS +++DYP EK+ YVSDDG S + + + E +FA+ W+PFC +Y I
Sbjct: 347 PTLDVMNTVLSAMAMDYPPEKLHVYVSDDGGSPITLNGMKEAWKFAKWWIPFCTRYRISC 526
Query: 369 RAPEYYFNEKI---DYLKDKVEPTFVKERRSMKREYEEFKVKINALVAKALKKPEEGWVM 425
R PE YF++ D + VE F+ ++R +K +YE FK I V
Sbjct: 527 RCPEAYFSDSQNDGDDFSENVE--FIADKRMIKEKYEAFKEGIMR-------------VK 661
Query: 426 QDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNA 485
+D G ++HP I+V + ++E +LP LVY+SREK+P +PHH KAGA+N
Sbjct: 662 EDQNHTTGITGQNHPSTIEVIQENCSG-EIEQVKLPLLVYVSREKKPSHPHHFKAGALNV 838
Query: 486 LVRVSAVLTNAPFMLNLDCDHYINNSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRH 545
L RVSAV++N+P++L LDCD + + R+AMCF +DP+ L +VQFPQ+F I ++
Sbjct: 839 LYRVSAVISNSPYLLVLDCDMFCGEPASARQAMCFHLDPKKSPSLAFVQFPQKFHNISKN 1018
Query: 546 DRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYG 585
D Y +++ + + +G+DGI GP+ GTG R+ALYG
Sbjct: 1019DIYDSQHRSTYTVLWQGMDGITGPLLSGTGFYMKREALYG 1138
Score = 142 bits (357), Expect = 9e-34
Identities = 85/324 (26%), Positives = 162/324 (49%), Gaps = 16/324 (4%)
Frame = +2
Query: 709 VKEAIHNISCGYEEKTDWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSA 768
+KE + SC YE T WGKE+G++YG+V ED+ T + C GW SVYC P +P F G++
Sbjct: 1262 IKETLLLTSCNYEIGTKWGKEVGFMYGTVCEDVHTSIMLSCNGWNSVYCDPPKPQFLGNS 1441
Query: 769 PINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLA 828
NL+D Q RW+ G +E L++ CPL ++ L R T +P +P
Sbjct: 1442 ATNLNDLFIQGTRWSSGLLESGLTKVCPL-INCPLRMSLLLRFCLTYITCFPLHCLPFWC 1618
Query: 829 YCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVAIEDWWRNEQFWV 888
+ +P +CLL+G + P ++ + +++S + E +G ++ +
Sbjct: 1619 FAIVPQICLLSGVSLYPKVSEPFFFIYAFIYLSAQTKHLFEALSTGGTFRTMIIEQRMRM 1798
Query: 889 IGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYLFKW-----TTLLIPPTT 943
+ ++ HL+ + L+K + +F T K D+ + + K+ L+P
Sbjct: 1799 MRSITCHLYGLLDCLMKEFGLREASFMPTNKVKDEEQTMLYQMDKYDFRIPNMFLVPMVA 1978
Query: 944 LIILNIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHL----YPFLKGLMGKQNR-- 997
LI++NI + G+ ++ G K+F +++ H+ YP ++G++ ++++
Sbjct: 1979 LIMINISCFIGGIYRVLSLGE------LDKMFIQIYLMAHIILVNYPIIEGIVIRKDKGR 2140
Query: 998 -TPTIVV---LW-SILLASIFSLI 1016
+P++VV +W +IL +++ L+
Sbjct: 2141 ISPSVVVTSNVWATILTCALYPLL 2212
>AW695706 similar to GP|3511285|gb cellulose synthase {Populus x canescens},
partial (13%)
Length = 653
Score = 242 bits (617), Expect = 6e-64
Identities = 109/119 (91%), Positives = 112/119 (93%)
Frame = +3
Query: 56 FPVCKPCYEYERSEGNQCCPQCNSRYKRHKGCPRVVGDEDENLDGDDFEDEFPVKNHHDD 115
FPVCKPCYEYERSEGNQCCPQCNSRYKRHKGCPRVVGDEDENLDGDDFEDEFPVKNHHDD
Sbjct: 93 FPVCKPCYEYERSEGNQCCPQCNSRYKRHKGCPRVVGDEDENLDGDDFEDEFPVKNHHDD 272
Query: 116 LDQNRDVNHVESVDYNQQKLHTFSSAGSVTGKDLEGEKEFYSNEEWQERVEKWKVRQEK 174
LDQNRDVNHVESVDYNQQKLHTFSSAGSVTGKDLEGEKEFYSNEEWQ + K + + K
Sbjct: 273 LDQNRDVNHVESVDYNQQKLHTFSSAGSVTGKDLEGEKEFYSNEEWQRKS*KMESKARK 449
Score = 150 bits (379), Expect = 2e-36
Identities = 76/92 (82%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = +1
Query: 150 EGEKEFYSNEEWQERVEKWKVRQEKRGLLNKEDGKEDQGEEDEYLMAEARQPLWRKVPIP 209
+G K F + + ERVEKWKVRQEKRGLLNKEDGKEDQGEEDEYLMAEARQPLWRKVPIP
Sbjct: 376 KGRKNFTAMKNGNERVEKWKVRQEKRGLLNKEDGKEDQGEEDEYLMAEARQPLWRKVPIP 555
Query: 210 SSLINPYRIVIIMRLVILAFFFRFRI-LTPAY 240
SSLINPYRIVIIMRLVILAF F + LTPAY
Sbjct: 556 SSLINPYRIVIIMRLVILAFLLPFPVSLTPAY 651
>AW688489 similar to PIR|T10797|T10 cellulose synthase (EC 2.4.1.-) catalytic
chain celA1 - upland cotton, partial (17%)
Length = 577
Score = 236 bits (602), Expect = 3e-62
Identities = 109/163 (66%), Positives = 132/163 (80%)
Frame = +2
Query: 198 ARQPLWRKVPIPSSLINPYRIVIIMRLVILAFFFRFRILTPAYDAYPLWLISVICEIWFA 257
A PL +PI S + PYR VII+RLVIL FF +R+ P A+PLWL S+ICEIWFA
Sbjct: 89 AALPLSVLMPIVKSKLAPYRTVIIVRLVILGLFFHYRVTNPVESAFPLWLTSIICEIWFA 268
Query: 258 LSWILDQFPKWLPITRETYLDRLSIRFEREGEPNQLSPVDVFVSSVDPLKEPPIITANTV 317
SW+LDQFPKW P+ R TY++ LS RFEREGEP+ L+ VD FVS+VDPLKEPP+ITANTV
Sbjct: 269 FSWVLDQFPKWSPVNRHTYIENLSARFEREGEPSGLASVDFFVSTVDPLKEPPLITANTV 448
Query: 318 LSILSVDYPVEKVTCYVSDDGASMLLFDCLAETSEFARRWVPF 360
LSIL+VDYPV+KV+CYVSDDGA+ML F+ L ET+EFA++WVPF
Sbjct: 449 LSILAVDYPVDKVSCYVSDDGAAMLTFESLVETAEFAKKWVPF 577
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.321 0.139 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,431,646
Number of Sequences: 36976
Number of extensions: 619750
Number of successful extensions: 4247
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 4050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4177
length of query: 1039
length of database: 9,014,727
effective HSP length: 106
effective length of query: 933
effective length of database: 5,095,271
effective search space: 4753887843
effective search space used: 4753887843
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Medicago: description of AC131248.10