TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC130807.5 + phase: 0 /pseudo
         (1454 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AL366725                                                              268  9e-72
TC93153 similar to GP|14715220|emb|CAC44106. gag polyprotein {Ci...   268  9e-72
BG452991 PIR|A25875|A25 histone H4 - Tetrahymena thermophila, pa...    60  5e-09
TC88387 similar to GP|13357253|gb|AAK20050.1 putative zinc finge...    54  6e-07
BG644693 weakly similar to GP|18767374|g Putative 22 kDa kafirin...    52  1e-06
BG644740 similar to PIR|A84460|A84 probable retroelement pol pol...    52  1e-06
TC78961 similar to GP|18252179|gb|AAL61922.1 unknown protein {Ar...    48  3e-05
TC82733 similar to GP|10177404|dbj|BAB10535. gene_id:K24M7.12~pi...    47  4e-05
TC77595 weakly similar to PIR|T18350|T18350 probable pol polypro...    45  2e-04
BG454871 weakly similar to GP|10140673|g putative gag-pol polypr...    45  2e-04
BG647713 homologue to GP|15042313|gb| 232R {Chilo iridescent vir...    45  3e-04
TC81207 similar to GP|21322752|dbj|BAB78536. cold shock protein-...    43  8e-04
TC87383 similar to GP|19168656|emb|CAD26175. DNA-DIRECTED RNA PO...    42  0.001
TC87382 similar to EGAD|146423|156195 vitellogenin {Anolis pulch...    40  0.009
BG586326 similar to PIR|G84493|G8 probable retroelement pol poly...    38  0.025
TC89725 similar to PIR|T05494|T05494 glycine-rich protein T19K4....    36  0.12
TC86737 weakly similar to GP|6683624|dbj|BAA89272.1 Pol {Alterna...    35  0.16
BG645355 similar to PIR|G96590|G965 hypothetical protein T24C10....    34  0.47
TC83030 weakly similar to GP|18855061|gb|AAL79753.1 putative RNA...    34  0.47
TC87639 GP|9663153|emb|CAC01132.1 transport-secretion protein 2....    32  1.4

>AL366725 
          Length = 485

 Score =  268 bits (686), Expect = 9e-72
 Identities = 121/161 (75%), Positives = 141/161 (87%)
 Frame = +2

Query: 153 KFYPHYTAETAEFSKCIKFENGLRANIKRAIGYQQIRIFSDLVSRCRICEEDTKAHYKVM 212
           KFYPHY AETAEFSKCIKFENGLR +IKRAIGYQQ+R+F DLV+ CRI EEDTKAH KV+
Sbjct: 2   KFYPHYAAETAEFSKCIKFENGLRPDIKRAIGYQQLRVFPDLVNTCRIYEEDTKAHDKVV 181

Query: 213 SERRGKGRQSRPKPYSAPADKGKQRLNDERRPNRRDASAEIVCFKCGEKGHKSNVCTKDE 272
           +ER+ KG+ SRPKPYSAPADKGKQR+ D+RRP ++DA AEIVCF  GEKGHKSNVC K+ 
Sbjct: 182 NERKTKGQ*SRPKPYSAPADKGKQRMVDDRRPKKKDAPAEIVCFNYGEKGHKSNVCPKEI 361

Query: 273 KKCFRCGQKGHLLADCKRGDVVCYNCNEEGHISTQCTQPKK 313
           KKC RC +KGH++ADCKR D+VC+NCNEEGHI +QC QPK+
Sbjct: 362 KKCVRCDKKGHIVADCKRNDIVCFNCNEEGHIGSQCKQPKR 484


>TC93153 similar to GP|14715220|emb|CAC44106. gag polyprotein {Cicer
           arietinum}, partial (8%)
          Length = 516

 Score =  268 bits (686), Expect = 9e-72
 Identities = 130/171 (76%), Positives = 145/171 (84%), Gaps = 2/171 (1%)
 Frame = +2

Query: 1   MAGRNDAAIAGALEAIAQAVEQQPQASNGE--VRMLETFLRNHPPAFKGMYDPDGAQSWL 58
           M G +DAA+  ALEA+AQAV+Q P+   G    RMLETFLRNHPP FKG Y PDGA  WL
Sbjct: 2   MTGSSDAALVAALEAVAQAVQQLPKVDTGSDGTRMLETFLRNHPPTFKGRYAPDGA*KWL 181

Query: 59  KEVERIFRAMQCSEVKKVRFGTHMLAEEADDWWVSLLPVLEQDEAVVTWAVFRREFLNRY 118
           KE+ERIFR MQC E +KV+FGTHMLAEEADDWW+SLLPVLEQD+AVVTWA+FR+EFL RY
Sbjct: 182 KEIERIFRVMQCFETQKVQFGTHMLAEEADDWWISLLPVLEQDDAVVTWAMFRKEFLGRY 361

Query: 119 FLEDV*GRKEIEFLELK*GDISVVEYAAKFVELAKFYPHYTAETAEFSKCI 169
           F EDV G+KEIEFLELK GD+SV EYAAKFVELA FYPHY+AETAEFSKCI
Sbjct: 362 FPEDVRGKKEIEFLELKQGDMSVTEYAAKFVELATFYPHYSAETAEFSKCI 514



 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 52/99 (52%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
 Frame = +2

Query: 1281 TDAAIAAALEAIAQAVGQQPQAGNGE--VRMLETFLRNHPPAFKGMYDPDGAQSWLKEVE 1338
            +DAA+ AALEA+AQAV Q P+   G    RMLETFLRNHPP FKG Y PDGA  WLKE+E
Sbjct: 14   SDAALVAALEAVAQAVQQLPKVDTGSDGTRMLETFLRNHPPTFKGRYAPDGA*KWLKEIE 193

Query: 1339 RIFRTDGQSERTIQSLEDLLRVCVLEQGGTWDSHLPLIE 1377
            RIFR     E   Q ++    +   E    W S LP++E
Sbjct: 194  RIFRVMQCFE--TQKVQFGTHMLAEEADDWWISLLPVLE 304


>BG452991 PIR|A25875|A25 histone H4 - Tetrahymena thermophila, partial (33%)
          Length = 560

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 30/74 (40%), Positives = 46/74 (61%)
 Frame = +1

Query: 901 ICWNSLET*VWYVSCRLKAYSWAC*RLIVISWVVSEKHSKWMSSWLI**LLVMARRIVTS 960
           +  NS ET*VW+V CR +  +W C*R     W+VS++  +WM SW I* L ++  ++V  
Sbjct: 64  VALNSSET*VWFVKCRHRV*NWGC*RSTTNFWIVSKRLRRWM*SW*I*CLGIIRLKMVIL 243

Query: 961 RLMIREY*DSEVEF 974
           +LMI+E     +E+
Sbjct: 244 KLMIKECCSFGIEY 285


>TC88387 similar to GP|13357253|gb|AAK20050.1 putative zinc finger protein
           {Oryza sativa (japonica cultivar-group)}, partial (96%)
          Length = 1286

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 33/117 (28%), Positives = 48/117 (40%), Gaps = 9/117 (7%)
 Frame = +1

Query: 212 MSERRGKGRQSRPKPYSAPADKGKQRLNDER---------RPNRRDASAEIVCFKCGEKG 262
           +S  R K R   P   S       +R+  ER         R +RR  S + +C  C   G
Sbjct: 268 VSRSRSKSRSRSPMDRSRSRSPVDRRIRSERFSHREAPYRRDSRRGFSQDNLCKNCKRPG 447

Query: 263 HKSNVCTKDEKKCFRCGQKGHLLADCKRGDVVCYNCNEEGHISTQCTQPKKDRTGGK 319
           H    C  +   C  C   GH+ ++C    + C+NC E GH+++ C       T GK
Sbjct: 448 HYVRECP-NVAVCHNCSLPGHIASECSTKSL-CWNCKEPGHMASSCPNEGICHTCGK 612



 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
 Frame = +1

Query: 248 DASAEIVCFKCGEKGHKSNVCTKDEKKCFRCGQKGHLLADCK-----RGDV-VCYNCNEE 301
           + S + +C+ C E GH ++ C  +E  C  CG+ GH   +C       GD+ +C NC ++
Sbjct: 517 ECSTKSLCWNCKEPGHMASSCP-NEGICHTCGKAGHRARECTVPQKPPGDLRLCNNCYKQ 693

Query: 302 GHISTQCTQPK 312
           GHI+ +CT  K
Sbjct: 694 GHIAVECTNEK 726



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
 Frame = +1

Query: 196 SRCRICEEDTKAHYKVMSERRGKGRQSRPKPYSAPADKGKQRLN---DERRPNR--RDAS 250
           SR R   + +++   V    R +    R  PY   + +G  + N   + +RP    R+  
Sbjct: 289 SRSRSPMDRSRSRSPVDRRIRSERFSHREAPYRRDSRRGFSQDNLCKNCKRPGHYVRECP 468

Query: 251 AEIVCFKCGEKGHKSNVCTKDEKKCFRCGQKGHLLADCKRGDVVCYNCNEEGHISTQCTQ 310
              VC  C   GH ++ C+  +  C+ C + GH+ + C   + +C+ C + GH + +CT 
Sbjct: 469 NVAVCHNCSLPGHIASECST-KSLCWNCKEPGHMASSCPN-EGICHTCGKAGHRARECTV 642

Query: 311 PKK 313
           P+K
Sbjct: 643 PQK 651



 Score = 38.1 bits (87), Expect = 0.025
 Identities = 22/85 (25%), Positives = 31/85 (35%), Gaps = 23/85 (27%)
 Frame = +1

Query: 247 RDASAEIVCFKCGEKGHKSNVCTKD----------------------EKKCFRCGQKGHL 284
           RD   + +C  C   GH +  C K                       +  C  C Q GH+
Sbjct: 763 RDCPNDPICNLCNISGHVARQCPKSNVIGDRGGGGSLRGGYRDGGFRDVVCRSCQQFGHM 942

Query: 285 LADCKRGDV-VCYNCNEEGHISTQC 308
             DC  G + +C NC   GH + +C
Sbjct: 943 SRDCMGGPLMICQNCGGRGHQAYEC 1017



 Score = 36.2 bits (82), Expect = 0.095
 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 41/96 (42%)
 Frame = +1

Query: 254 VCFKCGEKGHKSNVCTKDEKKCFRCGQKGHLLADCK------------------------ 289
           +C  C ++GH +  CT +EK C  C + GHL  DC                         
Sbjct: 670 LCNNCYKQGHIAVECT-NEKACNNCRKTGHLARDCPNDPICNLCNISGHVARQCPKSNVI 846

Query: 290 ---------RG--------DVVCYNCNEEGHISTQC 308
                    RG        DVVC +C + GH+S  C
Sbjct: 847 GDRGGGGSLRGGYRDGGFRDVVCRSCQQFGHMSRDC 954



 Score = 31.6 bits (70), Expect = 2.4
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +1

Query: 252 EIVCFKCGEKGHKSNVCTKDEKK-CFRCGQKGHLLADCKRGDVV 294
           ++VC  C + GH S  C       C  CG +GH   +C  G  V
Sbjct: 904 DVVCRSCQQFGHMSRDCMGGPLMICQNCGGRGHQAYECPSGRFV 1035


>BG644693 weakly similar to GP|18767374|g Putative 22 kDa kafirin cluster;
           Ty3-Gypsy type {Oryza sativa}, partial (15%)
          Length = 716

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 24/59 (40%), Positives = 40/59 (67%)
 Frame = +2

Query: 454 DEIPDVPPEREVEFSIDLVPGTKPMSMAPYRMSSSELAELKKQLED*LDKKFVRPNVSP 512
           D +  VPPE +++F IDL+P   P+ +  YR++  +L  LK QL+D L+K F++P++ P
Sbjct: 2   DHLL*VPPEWKIDFGIDLLPNMNPI*IPSYRINPLKLKVLKLQLKDLLEKGFIQPSIYP 178


>BG644740 similar to PIR|A84460|A84 probable retroelement pol polyprotein
           [imported] - Arabidopsis thaliana, partial (4%)
          Length = 754

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 36/93 (38%), Positives = 48/93 (50%)
 Frame = -2

Query: 451 VFPDEIPDVPPEREVEFSIDLVPGTKPMSMAPYRMSSSELAELKKQLED*LDKKFVRPNV 510
           VFPD  P +P ERE+ F IDL+  T+ +S  P  M  +EL +LK  L+D L+K F     
Sbjct: 429 VFPDNFPVIPLEREIFFCIDLLLDTQLISNPP*LMDRTELKKLKI*LKDSLEKGFNNQVF 250

Query: 511 SPWERLCCW*RRRTVA*GCALTIVS*TKLQ*RT 543
                 CC   +R    GCAL   +  + Q RT
Sbjct: 249 LHRVLRCCLCEKRMGTLGCALITDNLIRSQQRT 151


>TC78961 similar to GP|18252179|gb|AAL61922.1 unknown protein {Arabidopsis
           thaliana}, partial (71%)
          Length = 974

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 22/43 (51%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +2

Query: 274 KCFRCGQKGHLLADCKRGD--VVCYNCNEEGHISTQC-TQPKK 313
           +CF CG  GH   DCK GD    CY C E GHI   C   PKK
Sbjct: 356 RCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCKNSPKK 484



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 16/37 (43%), Positives = 23/37 (61%), Gaps = 2/37 (5%)
 Frame = +2

Query: 255 CFKCGEKGHKSNVCTKDE--KKCFRCGQKGHLLADCK 289
           CF CG  GH +  C   +   KC+RCG++GH+  +CK
Sbjct: 359 CFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCK 469


>TC82733 similar to GP|10177404|dbj|BAB10535.
           gene_id:K24M7.12~pir||S42136~similar to unknown protein
           {Arabidopsis thaliana}, partial (57%)
          Length = 710

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 22/67 (32%), Positives = 35/67 (51%), Gaps = 12/67 (17%)
 Frame = +3

Query: 254 VCFKCGEKGHKSNVCT-----KDEKKCFRCGQKGHLLADC----KRGDVV---CYNCNEE 301
           +C +C  +GH++  C      +D K  + CG  GH LA+C    + G  +   C+ C E+
Sbjct: 354 ICLRCRRRGHRAQNCPDGGSKEDFKY*YNCGDNGHSLANCPHPLQEGGTMFAQCFVCKEQ 533

Query: 302 GHISTQC 308
           GH+S  C
Sbjct: 534 GHLSKNC 554



 Score = 46.2 bits (108), Expect = 9e-05
 Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
 Frame = +3

Query: 214 ERRGKGRQSRPKPYSAPADKGKQRLNDERRPNRRDASAEIVCFKCGEKGHKSNVCTKD-- 271
           +++ K ++ +P   S P   GK+ L   R P  +   +   CF C    H +  CT+   
Sbjct: 180 KKKNKFKRKKPDSNSKPRT-GKRPL---RVPGMKPGDS---CFICKGLDHIAKFCTQKAE 338

Query: 272 ---EKKCFRCGQKGHLLADCKRGDV-----VCYNCNEEGHISTQCTQPKKDRTGGKVFA 322
               K C RC ++GH   +C  G         YNC + GH    C  P ++  GG +FA
Sbjct: 339 WEKNKICLRCRRRGHRAQNCPDGGSKEDFKY*YNCGDNGHSLANCPHPLQE--GGTMFA 509


>TC77595 weakly similar to PIR|T18350|T18350 probable pol polyprotein - rice
            blast fungus gypsy retroelement (fragment), partial (14%)
          Length = 1708

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 31/113 (27%), Positives = 52/113 (45%), Gaps = 4/113 (3%)
 Frame = +2

Query: 1342 RTDGQSERTIQSLEDLLRVCVLEQGGTWDSHLPLIEFTYNNGYHSSIGMAPFEALYGQRC 1401
            +TDG +ER  Q ++ +LR  V      W   LP ++    N ++SSIG  PF   +G   
Sbjct: 677  QTDGGTERWNQEIQAVLRAYVCWSQDNWGDLLPTVQLALRNRHNSSIGATPFFVEHGYHV 856

Query: 1402 RTPLCWFESGERVVLGPEIVQQTTEKVK----MIQEKMKVSHSRQKSYHDKRR 1450
                   ++G  V  G    Q   +++K     IQ ++  +  R ++  +KRR
Sbjct: 857  DPIPTVEDTGGVVSEGEAAAQLLVKRMKDVTGFIQAEIVAAQQRSEASANKRR 1015


>BG454871 weakly similar to GP|10140673|g putative gag-pol polyprotein {Oryza
            sativa (japonica cultivar-group)}, partial (7%)
          Length = 674

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 22/57 (38%), Positives = 29/57 (50%)
 Frame = +2

Query: 1343 TDGQSERTIQSLEDLLRVCVLEQGGTWDSHLPLIEFTYNNGYHSSIGMAPFEALYGQ 1399
            +DGQSE   +  E  LR  +      W    P  E+ YN  Y+ S  M PF+ALYG+
Sbjct: 104  SDGQSEALNKGXEMYLRCLMFTDPLKWSKAFPWAEYWYNTSYNISAAMTPFKALYGR 274


>BG647713 homologue to GP|15042313|gb| 232R {Chilo iridescent virus}, partial
           (1%)
          Length = 726

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 23/78 (29%), Positives = 37/78 (46%), Gaps = 2/78 (2%)
 Frame = +2

Query: 43  PAFKGMYDPDGAQSWLKEVERIFRAMQCSEVKKVRFGTHMLAEEADDWWVSLLPV--LEQ 100
           P F G   PD    WL+ +ER+F+  + +E +KV+     L + A  WW +L      E 
Sbjct: 347 PDF*GKLQPDEFVDWLQTIERVFKYKEVAEEQKVKIVAAKLKKHASIWWKNLKRKRNCEG 526

Query: 101 DEAVVTWAVFRREFLNRY 118
              + TW   R++   +Y
Sbjct: 527 KSKIKTWDKMRQKLTRKY 580


>TC81207 similar to GP|21322752|dbj|BAB78536. cold shock protein-1 {Triticum
           aestivum}, partial (39%)
          Length = 630

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 22/88 (25%), Positives = 30/88 (34%), Gaps = 31/88 (35%)
 Frame = +3

Query: 255 CFKCGEKGHKSNVCTKDEKK-----------------CFRCGQKGHLLADCKRGD----- 292
           C+ CG+ GH +  C + ++                  C+ CG   H   DC RG      
Sbjct: 351 CYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNN 530

Query: 293 ---------VVCYNCNEEGHISTQCTQP 311
                      CY C   GHI+  C  P
Sbjct: 531 GGGGYGGGGTSCYRCGGVGHIARDCATP 614



 Score = 32.0 bits (71), Expect = 1.8
 Identities = 15/61 (24%), Positives = 20/61 (32%), Gaps = 17/61 (27%)
 Frame = +3

Query: 275 CFRCGQKGHLLADCKRG-----------------DVVCYNCNEEGHISTQCTQPKKDRTG 317
           C+ CG  GH+  DC R                  D  CY C    H +  C +   +   
Sbjct: 351 CYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNN 530

Query: 318 G 318
           G
Sbjct: 531 G 533



 Score = 30.8 bits (68), Expect = 4.0
 Identities = 14/44 (31%), Positives = 22/44 (49%), Gaps = 4/44 (9%)
 Frame = +3

Query: 279 GQKGHLLADCKRGDVVCYNCNEEGHISTQCTQ----PKKDRTGG 318
           G +G    + + G   CY C + GHI+  C +     + DR+GG
Sbjct: 303 GGRGFRGGERRNGGGGCYTCGDTGHIARDCDRSDRNDRNDRSGG 434


>TC87383 similar to GP|19168656|emb|CAD26175. DNA-DIRECTED RNA POLYMERASE II
           {Encephalitozoon cuniculi}, partial (0%)
          Length = 1247

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 23/78 (29%), Positives = 36/78 (45%), Gaps = 2/78 (2%)
 Frame = -2

Query: 43  PAFKGMYDPDGAQSWLKEVERIFRAMQCSEVKKVRFGTHMLAEEADDWW--VSLLPVLEQ 100
           P F+G   PD    WL+ +ER+F+  +  E +KV+     L + A  WW  V      E 
Sbjct: 724 PDFEGNLQPDDLLDWLQIMERLFKYKEVLEEQKVKIVAAKLKKLASIWWENVKRRRKREG 545

Query: 101 DEAVVTWAVFRREFLNRY 118
              + TW   R++   +Y
Sbjct: 544 KSKIKTWEKMRQKLTRKY 491


>TC87382 similar to EGAD|146423|156195 vitellogenin {Anolis pulchellus},
           partial (7%)
          Length = 2304

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 21/78 (26%), Positives = 37/78 (46%), Gaps = 2/78 (2%)
 Frame = +2

Query: 43  PAFKGMYDPDGAQSWLKEVERIFRAMQCSEVKKVRFGTHMLAEEADDWWVSLLPVLEQD- 101
           P F+G    D    WL+ +ER+F   +  E +KV+     L + A  WW +L    +++ 
Sbjct: 629 PDFEGNLQLDDFLDWLQTIERVFEYKEVPEEQKVKIVAAKLKKHALIWWENLKRRRKREG 808

Query: 102 -EAVVTWAVFRREFLNRY 118
              + TW   R++   +Y
Sbjct: 809 KSKIKTWDKMRQKLTRKY 862


>BG586326 similar to PIR|G84493|G8 probable retroelement pol polyprotein
           [imported] - Arabidopsis thaliana, partial (13%)
          Length = 736

 Score = 38.1 bits (87), Expect = 0.025
 Identities = 38/104 (36%), Positives = 48/104 (45%)
 Frame = +3

Query: 775 FIMMRLSWAWVVF*CKRAKW*LMLLGS*GFMKRIILHMIWSWLQWCLF*KFGGIICMVSD 834
           FI  RLS   V +*    +      GS*  M+     MI  WL+    *+FG   CMV  
Sbjct: 54  FIQTRLSLD*VAY*PSMRRSSPTRQGS*ENMRETTPPMI*KWLR*YSP*RFGAHTCMVPR 233

Query: 835 LKYSAITGV*SIYLTRRN*T*DRGDGLSC*KIMILV*ITILVKL 878
            +Y     V*SI+L   +*T* RG G + *   I   + I  KL
Sbjct: 234 FRYIRTIKV*SIFLPSLS*T*GRGGGWNS*LTTI*TSLIIREKL 365


>TC89725 similar to PIR|T05494|T05494 glycine-rich protein T19K4.150 -
           Arabidopsis thaliana, partial (17%)
          Length = 378

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 16/57 (28%), Positives = 20/57 (35%), Gaps = 20/57 (35%)
 Frame = +1

Query: 255 CFKCGEKGHKSNVCTKDEK--------------------KCFRCGQKGHLLADCKRG 291
           C+ CGE GH +  CT                         C+ CG+ GH   DC  G
Sbjct: 16  CYNCGESGHMARECTSGGGGGGGRYGGGGGGGGGGGGGGSCYSCGESGHFARDCPTG 186



 Score = 33.5 bits (75), Expect = 0.62
 Identities = 14/54 (25%), Positives = 20/54 (36%), Gaps = 20/54 (37%)
 Frame = +1

Query: 275 CFRCGQKGHLLADCKRGDV--------------------VCYNCNEEGHISTQC 308
           C+ CG+ GH+  +C  G                       CY+C E GH +  C
Sbjct: 16  CYNCGESGHMARECTSGGGGGGGRYGGGGGGGGGGGGGGSCYSCGESGHFARDC 177



 Score = 30.4 bits (67), Expect = 5.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 295 CYNCNEEGHISTQCT 309
           CYNC E GH++ +CT
Sbjct: 16  CYNCGESGHMARECT 60


>TC86737 weakly similar to GP|6683624|dbj|BAA89272.1 Pol {Alternaria
           alternata}, partial (21%)
          Length = 1540

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
 Frame = +1

Query: 453 PDEIPDVPPEREV-EFSIDLVP----GTKPMSMAP-YRMSSSELAELKKQLED*LDKKFV 506
           P++   VP  R + + +I L+P       P+   P Y MS  EL  LKK LED LDK F+
Sbjct: 373 PEKAYQVPASRGLLDHAIPLIPDKDGNDPPLPWGPLYGMSRQELLVLKKTLEDLLDKGFI 552

Query: 507 RPNVS 511
           + + S
Sbjct: 553 KASGS 567


>BG645355 similar to PIR|G96590|G965 hypothetical protein T24C10.5 [imported]
           - Arabidopsis thaliana, partial (5%)
          Length = 627

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 13/48 (27%)
 Frame = -1

Query: 274 KCFRCGQKGHLLADCKRGDVV-------------CYNCNEEGHISTQC 308
           KC++C Q GH  ++C                   CY CN+ GH +  C
Sbjct: 504 KCYKCQQPGHWASNCPSMSAANRVSGGSGGASGNCYKCNQPGHWANNC 361


>TC83030 weakly similar to GP|18855061|gb|AAL79753.1 putative RNA helicase
           {Oryza sativa}, partial (7%)
          Length = 624

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 23/64 (35%), Positives = 28/64 (42%), Gaps = 8/64 (12%)
 Frame = +1

Query: 213 SERRG----KGRQSRPKPYSAPADK----GKQRLNDERRPNRRDASAEIVCFKCGEKGHK 264
           S RRG    K   S  KP  +  D     G+Q       PNR  A     CF CGE GH+
Sbjct: 25  SSRRGGRSYKSGNSWSKPERSSRDDWLIGGRQSSRSSSSPNRSFAGT---CFTCGESGHR 195

Query: 265 SNVC 268
           ++ C
Sbjct: 196 ASDC 207



 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
 Frame = +1

Query: 275 CFRCGQKGHLLADC--KRGD 292
           CF CG+ GH  +DC  KRGD
Sbjct: 166 CFTCGESGHRASDCPNKRGD 225


>TC87639 GP|9663153|emb|CAC01132.1 transport-secretion protein 2.2 (TTS-2.2)
           {Homo sapiens}, partial (2%)
          Length = 1522

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 14/29 (48%), Positives = 18/29 (61%), Gaps = 3/29 (10%)
 Frame = -1

Query: 295 CYNCNEEGHISTQCTQ---PKKDRTGGKV 320
           CY+C+E GHI+  CT     KK + G KV
Sbjct: 316 CYSCHERGHIARNCTNTSAAKKKKKGPKV 230


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.351    0.154    0.543 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,455,465
Number of Sequences: 36976
Number of extensions: 773255
Number of successful extensions: 6387
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2522
Number of HSP's successfully gapped in prelim test: 290
Number of HSP's that attempted gapping in prelim test: 3582
Number of HSP's gapped (non-prelim): 3188
length of query: 1454
length of database: 9,014,727
effective HSP length: 108
effective length of query: 1346
effective length of database: 5,021,319
effective search space: 6758695374
effective search space used: 6758695374
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.9 bits)
S2: 65 (29.6 bits)