TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC130806.3 - phase: 0 
         (320 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC93153 similar to GP|14715220|emb|CAC44106. gag polyprotein {Ci...   269  9e-73
AL366725                                                              250  6e-67
TC87383 similar to GP|19168656|emb|CAD26175. DNA-DIRECTED RNA PO...    52  4e-07
TC87382 similar to EGAD|146423|156195 vitellogenin {Anolis pulch...    50  1e-06
BG647713 homologue to GP|15042313|gb| 232R {Chilo iridescent vir...    49  2e-06
TC78961 similar to GP|18252179|gb|AAL61922.1 unknown protein {Ar...    42  2e-04
TC88387 similar to GP|13357253|gb|AAK20050.1 putative zinc finge...    40  0.001
TC91075 similar to PIR|T48025|T48025 hypothetical protein T12C14...    32  0.25
TC83119 similar to GP|13357253|gb|AAK20050.1 putative zinc finge...    32  0.25
TC83030 weakly similar to GP|18855061|gb|AAL79753.1 putative RNA...    32  0.33
TC82733 similar to GP|10177404|dbj|BAB10535. gene_id:K24M7.12~pi...    32  0.33
TC79455 similar to PIR|T51518|T51518 ubiquitin-fusion degradatio...    31  0.56
TC79456 similar to PIR|T51518|T51518 ubiquitin-fusion degradatio...    31  0.56
TC88889 similar to GP|20340241|gb|AAM19707.1 putative RING zinc ...    30  1.2
TC87651 similar to GP|15292729|gb|AAK92733.1 putative polygalact...    30  1.2
TC81162 weakly similar to PIR|T47673|T47673 hypothetical protein...    30  1.6
TC89153 similar to GP|18855061|gb|AAL79753.1 putative RNA helica...    30  1.6
BF641234 similar to GP|20146108|dbj protein phosphatase 2C {Mese...    29  2.8
BG645355 similar to PIR|G96590|G965 hypothetical protein T24C10....    29  2.8
TC92636 homologue to GP|15042313|gb|AAK82093.1 232R {Chilo iride...    29  2.8

>TC93153 similar to GP|14715220|emb|CAC44106. gag polyprotein {Cicer
           arietinum}, partial (8%)
          Length = 516

 Score =  269 bits (688), Expect = 9e-73
 Identities = 132/172 (76%), Positives = 145/172 (83%)
 Frame = +2

Query: 1   MAGSNDAALVAALQAVAQAVGQWPNANAGVTAEMRMLETFMRTHPPTFKGRYDPDGAQTW 60
           M GS+DAALVAAL+AVAQAV Q P  + G     RMLETF+R HPPTFKGRY PDGA  W
Sbjct: 2   MTGSSDAALVAALEAVAQAVQQLPKVDTGSDGT-RMLETFLRNHPPTFKGRYAPDGA*KW 178

Query: 61  LKEIERVFRVMQYTEDQKVRFGTHQLAEEGDDWWVSLLPTLKQDGAAVTWAVFRREFLSR 120
           LKEIER+FRVMQ  E QKV+FGTH LAEE DDWW+SLLP L+QD A VTWA+FR+EFL R
Sbjct: 179 LKEIERIFRVMQCFETQKVQFGTHMLAEEADDWWISLLPVLEQDDAVVTWAMFRKEFLGR 358

Query: 121 YFPEDVRGKKEIEFLELKQGNMSMTEYAAKFVELAKFYPHYAAETTEFLKCI 172
           YFPEDVRGKKEIEFLELKQG+MS+TEYAAKFVELA FYPHY+AET EF KCI
Sbjct: 359 YFPEDVRGKKEIEFLELKQGDMSVTEYAAKFVELATFYPHYSAETAEFSKCI 514


>AL366725 
          Length = 485

 Score =  250 bits (638), Expect = 6e-67
 Identities = 120/160 (75%), Positives = 132/160 (82%), Gaps = 5/160 (3%)
 Frame = +2

Query: 156 KFYPHYAAETTEFLKCIKFENGLRADIKRAIGYQQIRVFSELVNSCRIYEDDTKAHYKIV 215
           KFYPHYAAET EF KCIKFENGLR DIKRAIGYQQ+RVF +LVN+CRIYE+DTKAH K+V
Sbjct: 2   KFYPHYAAETAEFSKCIKFENGLRPDIKRAIGYQQLRVFPDLVNTCRIYEEDTKAHDKVV 181

Query: 216 NERKTKGQQSRPKPYSAPADKGKQRMVEDRRPKKKDALAEIICFNCGEKGHKSNACPSEI 275
           NERKTKGQ SRPKPYSAPADKGKQRMV+DRRPKKKDA AEI+CFN GEKGHKSN CP EI
Sbjct: 182 NERKTKGQ*SRPKPYSAPADKGKQRMVDDRRPKKKDAPAEIVCFNYGEKGHKSNVCPKEI 361

Query: 276 KRCFRCGKKGH-----KSNAEIICFNIQHEGRASHRGRSP 310
           K+C RC KKGH     K N +I+CFN   EG    + + P
Sbjct: 362 KKCVRCDKKGHIVADCKRN-DIVCFNCNEEGHIGSQCKQP 478


>TC87383 similar to GP|19168656|emb|CAD26175. DNA-DIRECTED RNA POLYMERASE II
           {Encephalitozoon cuniculi}, partial (0%)
          Length = 1247

 Score = 51.6 bits (122), Expect = 4e-07
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
 Frame = -2

Query: 46  PTFKGRYDPDGAQTWLKEIERVFRVMQYTEDQKVRFGTHQLAEEGDDWWVSLLPTLKQDG 105
           P F+G   PD    WL+ +ER+F+  +  E+QKV+    +L +    WW ++    K++G
Sbjct: 724 PDFEGNLQPDDLLDWLQIMERLFKYKEVLEEQKVKIVAAKLKKLASIWWENVKRRRKREG 545

Query: 106 AA--VTWAVFRREFLSRYFP 123
            +   TW   R++   +Y P
Sbjct: 544 KSKIKTWEKMRQKLTRKYLP 485


>TC87382 similar to EGAD|146423|156195 vitellogenin {Anolis pulchellus},
           partial (7%)
          Length = 2304

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 26/80 (32%), Positives = 40/80 (49%), Gaps = 2/80 (2%)
 Frame = +2

Query: 46  PTFKGRYDPDGAQTWLKEIERVFRVMQYTEDQKVRFGTHQLAEEGDDWWVSLLPTLKQDG 105
           P F+G    D    WL+ IERVF   +  E+QKV+    +L +    WW +L    K++G
Sbjct: 629 PDFEGNLQLDDFLDWLQTIERVFEYKEVPEEQKVKIVAAKLKKHALIWWENLKRRRKREG 808

Query: 106 AA--VTWAVFRREFLSRYFP 123
            +   TW   R++   +Y P
Sbjct: 809 KSKIKTWDKMRQKLTRKYLP 868


>BG647713 homologue to GP|15042313|gb| 232R {Chilo iridescent virus}, partial
           (1%)
          Length = 726

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 28/95 (29%), Positives = 46/95 (47%), Gaps = 7/95 (7%)
 Frame = +2

Query: 46  PTFKGRYDPDGAQTWLKEIERVFRVMQYTEDQKVRFGTHQLAEEGDDWWVSLLPTLKQDG 105
           P F G+  PD    WL+ IERVF+  +  E+QKV+    +L +    WW +L      +G
Sbjct: 347 PDF*GKLQPDEFVDWLQTIERVFKYKEVAEEQKVKIVAAKLKKHASIWWKNLKRKRNCEG 526

Query: 106 AA--VTWAVFRREFLSR-----YFPEDVRGKKEIE 133
            +   TW   R++   +     Y+ ++   KK I+
Sbjct: 527 KSKIKTWDKMRQKLTRKYLHPHYYQDNFTQKKNIQ 631


>TC78961 similar to GP|18252179|gb|AAL61922.1 unknown protein {Arabidopsis
           thaliana}, partial (71%)
          Length = 974

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
 Frame = +2

Query: 258 CFNCGEKGHKSNACPSEI--KRCFRCGKKGH-----KSNAEIICFNIQHEGRASHRGRSP 310
           CFNCG  GH +  C +     +C+RCG++GH     K++ + +  + +   R+  R RSP
Sbjct: 359 CFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCKNSPKKLSRHARSVSRSPGRSRSP 538

Query: 311 ANRSS 315
           A   S
Sbjct: 539 ARSRS 553



 Score = 30.4 bits (67), Expect = 0.95
 Identities = 17/58 (29%), Positives = 24/58 (41%)
 Frame = +2

Query: 258 CFNCGEKGHKSNACPSEIKRCFRCGKKGHKSNAEIICFNIQHEGRASHRGRSPANRSS 315
           C+ CGE+GH    C +  K+  R  +   +S             R+  R RSPA   S
Sbjct: 425 CYRCGERGHIEKNCKNSPKKLSRHARSVSRSPG---------RSRSPARSRSPARSRS 571


>TC88387 similar to GP|13357253|gb|AAK20050.1 putative zinc finger protein
           {Oryza sativa (japonica cultivar-group)}, partial (96%)
          Length = 1286

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = +1

Query: 257 ICFNCGEKGHKSNACPSEIKRCFRCGKKGHKS 288
           +C+NC E GH +++CP+E   C  CGK GH++
Sbjct: 535 LCWNCKEPGHMASSCPNE-GICHTCGKAGHRA 627



 Score = 35.8 bits (81), Expect = 0.023
 Identities = 26/97 (26%), Positives = 43/97 (43%), Gaps = 19/97 (19%)
 Frame = +1

Query: 224 QSRPKPYS-APADKGKQRMVEDRR-----------PKKKDALA----EIICFNCGEKGHK 267
           +SR K  S +P D+ + R   DRR           P ++D+      + +C NC   GH 
Sbjct: 274 RSRSKSRSRSPMDRSRSRSPVDRRIRSERFSHREAPYRRDSRRGFSQDNLCKNCKRPGHY 453

Query: 268 SNACPSEIKRCFRCGKKGH---KSNAEIICFNIQHEG 301
              CP+ +  C  C   GH   + + + +C+N +  G
Sbjct: 454 VRECPN-VAVCHNCSLPGHIASECSTKSLCWNCKEPG 561



 Score = 35.4 bits (80), Expect = 0.030
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 9/56 (16%)
 Frame = +1

Query: 255 EIICFNCGEKGHKSNAC------PSEIKRCFRCGKKGH---KSNAEIICFNIQHEG 301
           E IC  CG+ GH++  C      P +++ C  C K+GH   +   E  C N +  G
Sbjct: 586 EGICHTCGKAGHRARECTVPQKPPGDLRLCNNCYKQGHIAVECTNEKACNNCRKTG 753



 Score = 29.6 bits (65), Expect = 1.6
 Identities = 11/35 (31%), Positives = 20/35 (56%), Gaps = 1/35 (2%)
 Frame = +1

Query: 255 EIICFNCGEKGHKSNAC-PSEIKRCFRCGKKGHKS 288
           +++C +C + GH S  C    +  C  CG +GH++
Sbjct: 904 DVVCRSCQQFGHMSRDCMGGPLMICQNCGGRGHQA 1008



 Score = 29.6 bits (65), Expect = 1.6
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 256 IICFNCGEKGHKSNACPS 273
           +IC NCG +GH++  CPS
Sbjct: 970 MICQNCGGRGHQAYECPS 1023


>TC91075 similar to PIR|T48025|T48025 hypothetical protein T12C14.30 -
           Arabidopsis thaliana, partial (29%)
          Length = 686

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 15/40 (37%), Positives = 22/40 (54%)
 Frame = +2

Query: 236 KGKQRMVEDRRPKKKDALAEIICFNCGEKGHKSNACPSEI 275
           + K +  E    K+K+   E+IC  CGE GH +  CPS +
Sbjct: 329 EAKSKATERNWKKRKEE--EMICKLCGESGHFTQGCPSTL 442


>TC83119 similar to GP|13357253|gb|AAK20050.1 putative zinc finger protein
           {Oryza sativa (japonica cultivar-group)}, partial (16%)
          Length = 421

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 15/64 (23%), Positives = 28/64 (43%)
 Frame = +3

Query: 219 KTKGQQSRPKPYSAPADKGKQRMVEDRRPKKKDALAEIICFNCGEKGHKSNACPSEIKRC 278
           +++ +   P+     +D+   R    RR   +    + +C NC   GH +  CP+ +  C
Sbjct: 231 RSRSRSRSPRIRKIRSDRHSYRDAPYRRDSSRGFSRDNLCKNCKRPGHYARECPN-VAVC 407

Query: 279 FRCG 282
             CG
Sbjct: 408 HNCG 419


>TC83030 weakly similar to GP|18855061|gb|AAL79753.1 putative RNA helicase
           {Oryza sativa}, partial (7%)
          Length = 624

 Score = 32.0 bits (71), Expect = 0.33
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = +1

Query: 218 RKTKGQQSRPKPYSAPADK----GKQRMVEDRRPKKKDALAEIICFNCGEKGHKSNACPS 273
           R  K   S  KP  +  D     G+Q       P +  A     CF CGE GH+++ CP+
Sbjct: 43  RSYKSGNSWSKPERSSRDDWLIGGRQSSRSSSSPNRSFAGT---CFTCGESGHRASDCPN 213

Query: 274 E 274
           +
Sbjct: 214 K 216


>TC82733 similar to GP|10177404|dbj|BAB10535.
           gene_id:K24M7.12~pir||S42136~similar to unknown protein
           {Arabidopsis thaliana}, partial (57%)
          Length = 710

 Score = 32.0 bits (71), Expect = 0.33
 Identities = 13/37 (35%), Positives = 20/37 (53%), Gaps = 7/37 (18%)
 Frame = +3

Query: 259 FNCGEKGHKSNACPSEIK-------RCFRCGKKGHKS 288
           +NCG+ GH    CP  ++       +CF C ++GH S
Sbjct: 435 YNCGDNGHSLANCPHPLQEGGTMFAQCFVCKEQGHLS 545



 Score = 31.6 bits (70), Expect = 0.43
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 23/93 (24%)
 Frame = +3

Query: 217 ERKTKGQQSRPKPYSAPADKGKQRMVEDRRP-------KKKDALAEI-----------IC 258
           ++K K ++ +P   S P    +   V   +P       K  D +A+            IC
Sbjct: 180 KKKNKFKRKKPDSNSKPRTGKRPLRVPGMKPGDSCFICKGLDHIAKFCTQKAEWEKNKIC 359

Query: 259 FNCGEKGHKSNACP-----SEIKRCFRCGKKGH 286
             C  +GH++  CP      + K  + CG  GH
Sbjct: 360 LRCRRRGHRAQNCPDGGSKEDFKY*YNCGDNGH 458



 Score = 28.5 bits (62), Expect = 3.6
 Identities = 20/76 (26%), Positives = 32/76 (41%), Gaps = 5/76 (6%)
 Frame = +3

Query: 218 RKTKGQQSRPKPYSAPADKGKQRMVEDRRPKKKDALAEIICFNCGEKGHKSNACPSEI-- 275
           +K K +  R KP S    +  +R +     K  D+     CF C    H +  C  +   
Sbjct: 177 KKKKNKFKRKKPDSNSKPRTGKRPLRVPGMKPGDS-----CFICKGLDHIAKFCTQKAEW 341

Query: 276 ---KRCFRCGKKGHKS 288
              K C RC ++GH++
Sbjct: 342 EKNKICLRCRRRGHRA 389


>TC79455 similar to PIR|T51518|T51518 ubiquitin-fusion degradation
           protein-like - Arabidopsis thaliana, partial (8%)
          Length = 627

 Score = 31.2 bits (69), Expect = 0.56
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -2

Query: 112 VFRREFLSRYFPEDVRGKKEI 132
           +F R+FLSR FPE VR KK++
Sbjct: 68  IFSRKFLSRNFPEKVRKKKDL 6


>TC79456 similar to PIR|T51518|T51518 ubiquitin-fusion degradation
           protein-like - Arabidopsis thaliana, partial (31%)
          Length = 1392

 Score = 31.2 bits (69), Expect = 0.56
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -2

Query: 112 VFRREFLSRYFPEDVRGKKEI 132
           +F R+FLSR FPE VR KK++
Sbjct: 71  IFSRKFLSRNFPEKVRKKKDL 9


>TC88889 similar to GP|20340241|gb|AAM19707.1 putative RING zinc finger
           protein-like protein {Thellungiella halophila}, partial
           (46%)
          Length = 911

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 21/73 (28%), Positives = 31/73 (41%), Gaps = 9/73 (12%)
 Frame = +1

Query: 224 QSRPKPYS---APADKGKQRMVEDRRPKKKDALAEIICFNCGEKGHKSNAC------PSE 274
           Q+ P+ Y    +P+D      VE+ R +      + +C +C E  H  + C       SE
Sbjct: 370 QNIPESYEIHLSPSDD----FVEEFRSRTPTLRFDSVCNSCKEPEHDCSVCLTQFEPESE 537

Query: 275 IKRCFRCGKKGHK 287
           I  C  CG   HK
Sbjct: 538 INYCISCGHVFHK 576


>TC87651 similar to GP|15292729|gb|AAK92733.1 putative polygalacturonase PG1
           {Arabidopsis thaliana}, partial (35%)
          Length = 822

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 54  PDGAQTWLKEIERVFRVMQYTEDQKVRFGTHQLAEEGDDWW 94
           PDG  +W +   R   ++ Y  DQ    GT  +   GD WW
Sbjct: 570 PDGPDSWPEADSRNQWLVFYKLDQMSLNGTGTIEGNGDQWW 692


>TC81162 weakly similar to PIR|T47673|T47673 hypothetical protein T26I12.220
           - Arabidopsis thaliana, partial (9%)
          Length = 756

 Score = 29.6 bits (65), Expect = 1.6
 Identities = 17/69 (24%), Positives = 26/69 (37%)
 Frame = +2

Query: 205 EDDTKAHYKIVNERKTKGQQSRPKPYSAPADKGKQRMVEDRRPKKKDALAEIICFNCGEK 264
           E    A   +  E+   G++S       P   GK   VE             +C+ C +K
Sbjct: 269 EKSVIAEKSVAGEKSGAGEKSFA--VEQPGAGGKPSSVEQPSSVASGKRKNRMCYGCRQK 442

Query: 265 GHKSNACPS 273
           GH  + CP+
Sbjct: 443 GHNLSECPN 469


>TC89153 similar to GP|18855061|gb|AAL79753.1 putative RNA helicase {Oryza
           sativa}, partial (3%)
          Length = 737

 Score = 29.6 bits (65), Expect = 1.6
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = +3

Query: 258 CFNCGEKGHKSNACPS 273
           CF+CG+ GH+++ CP+
Sbjct: 147 CFSCGQPGHRASDCPN 194


>BF641234 similar to GP|20146108|dbj protein phosphatase 2C {Mesembryanthemum
           crystallinum}, partial (13%)
          Length = 591

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
 Frame = -3

Query: 99  PTLKQDGAAVTWAVFRREFLSRYFPEDVRGKKEIEFLELKQGNMSMTEYAAKFVELAKFY 158
           P +        W   R E  S      +R   ++ F +    N   +        ++  +
Sbjct: 439 PYISTSSGTELWKEIRLETFSNILSRYIR---QLHFRKRSVANKRFSSLKQFTPSISSIF 269

Query: 159 PHYAAETTEF-LKCIKFENGLRADIKRAIGYQQ 190
            ++  +T++   +  KFENG   D K+ +GYQ+
Sbjct: 268 LNHKIQTSKIQTQ*PKFENGFNPDCKKELGYQK 170


>BG645355 similar to PIR|G96590|G965 hypothetical protein T24C10.5 [imported]
           - Arabidopsis thaliana, partial (5%)
          Length = 627

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 12/45 (26%), Positives = 20/45 (43%), Gaps = 13/45 (28%)
 Frame = -1

Query: 258 CFNCGEKGHKSNACPS-------------EIKRCFRCGKKGHKSN 289
           C+ C + GH ++ CPS                 C++C + GH +N
Sbjct: 501 CYKCQQPGHWASNCPSMSAANRVSGGSGGASGNCYKCNQPGHWAN 367


>TC92636 homologue to GP|15042313|gb|AAK82093.1 232R {Chilo iridescent
           virus}, partial (1%)
          Length = 772

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 46  PTFKGRYDPDGAQTWLKEIERVF 68
           P F+G   PD    WL+ IERVF
Sbjct: 438 PDFEGELQPDEFVDWLQAIERVF 506


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.319    0.133    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,634,205
Number of Sequences: 36976
Number of extensions: 129331
Number of successful extensions: 652
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of query: 320
length of database: 9,014,727
effective HSP length: 96
effective length of query: 224
effective length of database: 5,465,031
effective search space: 1224166944
effective search space used: 1224166944
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)