BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC130275.4 - phase: 0
(362 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC79156 weakly similar to GP|11034603|dbj|BAB17127. putative rec... 310 4e-85
TC90022 similar to GP|14587271|dbj|BAB61189. putative receptor-l... 224 5e-59
TC80060 similar to PIR|D96574|D96574 hypothetical protein T3F20.... 222 2e-58
TC92341 similar to GP|21741394|emb|CAD39676. OSJNBb0051N19.7 {Or... 220 8e-58
TC83244 weakly similar to GP|11034602|dbj|BAB17126. putative rec... 211 1e-57
TC78270 similar to GP|16649103|gb|AAL24403.1 Unknown protein {Ar... 212 2e-55
CB892238 weakly similar to GP|21741394|em OSJNBb0051N19.7 {Oryza... 206 1e-53
TC88193 similar to PIR|G96602|G96602 probable receptor protein k... 193 4e-53
TC80512 weakly similar to PIR|A96693|A96693 probable receptor se... 199 1e-51
TC80500 similar to PIR|G96602|G96602 probable receptor protein k... 197 5e-51
TC80565 weakly similar to GP|14335072|gb|AAK59800.1 AT5g20050/F2... 197 7e-51
CA916960 weakly similar to GP|14090203|db putative receptor kina... 196 9e-51
TC90404 similar to GP|21593619|gb|AAM65586.1 receptor protein ki... 175 5e-50
TC78763 somatic embryogenesis receptor kinase 1 [Medicago trunca... 187 5e-48
TC80518 weakly similar to PIR|T49986|T49986 lectin-like protein ... 183 8e-47
TC88105 similar to GP|21593085|gb|AAM65034.1 Putative protein ki... 182 2e-46
TC92229 similar to PIR|B86369|B86369 hypothetical protein AAC980... 181 3e-46
TC79033 similar to GP|21554229|gb|AAM63304.1 somatic embryogenes... 180 9e-46
TC89307 similar to GP|21741394|emb|CAD39676. OSJNBb0051N19.7 {Or... 134 2e-44
TC77448 SYMRK; MtSYMRK [Medicago truncatula]; nod region linked ... 175 3e-44
>TC79156 weakly similar to GP|11034603|dbj|BAB17127. putative receptor
kinase {Oryza sativa (japonica cultivar-group)}, partial
(18%)
Length = 1246
Score = 310 bits (795), Expect = 4e-85
Identities = 153/268 (57%), Positives = 196/268 (73%), Gaps = 2/268 (0%)
Frame = +1
Query: 1 MDKFLNDMEREKPIRFTGQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSS 60
M++ +++ REKP+RFT ++L T+ YS +LGSG FG V+KG SNG VAVKVL
Sbjct: 445 MERIFSNINREKPVRFTPEKLDEITEKYSTILGSGAFGVVFKGELSNGENVAVKVLN-CL 621
Query: 61 NKKIDEQFMAEVGTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLF--HETKV 118
+ ++EQF AEV TIGR +H NLV+LYGFCF R+ ALVYEY+ NGSLD+Y+F
Sbjct: 622 DMGMEEQFKAEVITIGRTYHINLVKLYGFCFHRDKRALVYEYVENGSLDKYIFGSKNRND 801
Query: 119 LGYEKLHEIAIGTARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRE 178
++KLH+IAIGTA+GIAYLHEEC+HRIIHYDIKP N+LLD PK+ADFGLAK +RE
Sbjct: 802 FDFQKLHKIAIGTAKGIAYLHEECKHRIIHYDIKPENVLLDMKLEPKIADFGLAKLRSRE 981
Query: 179 NTHITMTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLAIKNTESQEWF 238
+ T RGT GYAAPE+W P+P+T+KCDVYSFG+LLFEI+GRRR+ +ESQ+WF
Sbjct: 982 SNIELNTHFRGTRGYAAPEMWKPYPVTYKCDVYSFGILLFEIVGRRRHFDSSYSESQQWF 1161
Query: 239 PIWVWKKKDAGLLGEAMIVCGIEEKNKE 266
P W W+ + L + +C IEEK+ E
Sbjct: 1162PRWTWEMFENNELVVMLALCEIEEKDSE 1245
>TC90022 similar to GP|14587271|dbj|BAB61189. putative receptor-like kinase
{Oryza sativa (japonica cultivar-group)}, partial (31%)
Length = 773
Score = 224 bits (570), Expect = 5e-59
Identities = 117/237 (49%), Positives = 163/237 (68%), Gaps = 5/237 (2%)
Frame = +1
Query: 13 PIRFTGQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAEV 72
PIR++ +++ T+ + + LG GG+G VYKG +G VA+K+L K + F+ EV
Sbjct: 7 PIRYSYTEIKKMTNGFKDKLGEGGYGKVYKGKLRSGPSVAIKMLGKHKGKGNGQDFINEV 186
Query: 73 GTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLF--HETKVLGYEKLHEIAIG 130
TIGRIHH N+VRL GFC E + ALVY++M NGSLD+Y+ + L Y++++EI++
Sbjct: 187 ATIGRIHHTNVVRLIGFCVEGSKRALVYDFMPNGSLDKYISSREDHISLTYKQIYEISLA 366
Query: 131 TARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRGT 190
ARGIAYLH+ C +I+H+DIKP NILLD++F KV+DFGLAK EN+ +TMT RGT
Sbjct: 367 VARGIAYLHQGCDMQILHFDIKPHNILLDQDFIAKVSDFGLAKLYPIENSIVTMTAARGT 546
Query: 191 PGYAAPELWMP--FPITHKCDVYSFGMLLFEIIGRRRNL-AIKNTESQEWFPIWVWK 244
GY APEL+ +++K DVYSFGMLL EI RRRNL + + SQ +FP W+++
Sbjct: 547 IGYMAPELFYKNIGKVSYKADVYSFGMLLMEIANRRRNLNSNADDSSQIFFPYWIYQ 717
>TC80060 similar to PIR|D96574|D96574 hypothetical protein T3F20.24
[imported] - Arabidopsis thaliana, partial (32%)
Length = 1547
Score = 222 bits (565), Expect = 2e-58
Identities = 133/319 (41%), Positives = 185/319 (57%), Gaps = 5/319 (1%)
Frame = +1
Query: 19 QQLRIATDNYS--NLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAEVGTIG 76
+Q+++AT+N+ N +G GGFG VYKG+ S+G ++AVK L S +K+ + +F+ E+G I
Sbjct: 166 RQIKVATNNFDPKNKIGEGGFGPVYKGVLSDGAVIAVKQL-SSKSKQGNREFVNEIGMIS 342
Query: 77 RIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFHETKV---LGYEKLHEIAIGTAR 133
+ H NLV+LYG C E N + LVYEYM N SL R LF + + L + +I +G AR
Sbjct: 343 ALQHPNLVKLYGCCIEGNQLLLVYEYMENNSLARALFGKPEQRLNLDWRTRMKICVGIAR 522
Query: 134 GIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRGTPGY 193
G+AYLHEE + +I+H DIK N+LLDKN K++DFGLAK ENTHI+ T GT GY
Sbjct: 523 GLAYLHEESRLKIVHRDIKATNVLLDKNLNAKISDFGLAKLDEEENTHIS-TRIAGTIGY 699
Query: 194 AAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLAIKNTESQEWFPIWVWKKKDAGLLGE 253
APE M +T K DVYSFG++ EI+ N + E + W + ++ G L E
Sbjct: 700 MAPEYAMRGYLTDKADVYSFGVVALEIVSGMSNTNYRPKEEFVYLLDWAYVLQEQGNLLE 879
Query: 254 AMIVCGIEEKNKEIAERMIKVALWCVQYRPELRPIMSVVVKMLEGSLEIPKTFNPFQHLI 313
+ + + E A RM+++AL C P LRP MS VV MLEG+ I
Sbjct: 880 LVDPTLGSKYSSEEAMRMLQLALLCTNPSPTLRPPMSSVVSMLEGNTPIQAPIIKRSDST 1059
Query: 314 DGTEFTTHSVQESNTYTTS 332
G F + ++ TTS
Sbjct: 1060AGARFKAFELLSQDSQTTS 1116
>TC92341 similar to GP|21741394|emb|CAD39676. OSJNBb0051N19.7 {Oryza
sativa}, partial (60%)
Length = 779
Score = 220 bits (560), Expect = 8e-58
Identities = 113/238 (47%), Positives = 161/238 (67%), Gaps = 7/238 (2%)
Frame = +2
Query: 15 RFTGQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAEVGT 74
R+ +++ T++ + LG GGFG VYKG NG +VAVK+L S E+F+ EV +
Sbjct: 29 RYKYSEIKNMTNSLKDKLGQGGFGVVYKGKLFNGCLVAVKILNVSKGN--GEEFINEVAS 202
Query: 75 IGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFHET----KVLGYEKLHEIAIG 130
I R H N+V L GFCFE N ALVYE+M NGSLD++++++ L ++KL++IA G
Sbjct: 203 ISRTSHVNVVTLLGFCFEGNKKALVYEFMSNGSLDKFIYNKELETIASLSWDKLYKIAKG 382
Query: 131 TARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRGT 190
ARG+ YLH C RI+H+DIKP NILLD N PK++DFGLAK C R+ + ++M+ RGT
Sbjct: 383 IARGLEYLHGGCTTRILHFDIKPHNILLDDNLCPKISDFGLAKLCLRKESIVSMSDQRGT 562
Query: 191 PGYAAPELWMPF--PITHKCDVYSFGMLLFEIIGRRRNL-AIKNTESQEWFPIWVWKK 245
GY APE+W ++HK DVYS+GM+L E++G R+N+ A + S+ +FP WV+K+
Sbjct: 563 MGYVAPEVWNRHFGGVSHKSDVYSYGMILLEMVGGRKNINADASRTSEIYFPHWVYKR 736
>TC83244 weakly similar to GP|11034602|dbj|BAB17126. putative receptor
kinase {Oryza sativa (japonica cultivar-group)}, partial
(36%)
Length = 1366
Score = 211 bits (537), Expect(2) = 1e-57
Identities = 112/248 (45%), Positives = 156/248 (62%), Gaps = 6/248 (2%)
Frame = +1
Query: 1 MDKFLNDMEREKPIRFTGQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSS 60
++KFL D KP RFT ++ T+ + LG G G+V+KG+ S +VAVKVL +
Sbjct: 496 IEKFLEDYRALKPTRFTYADIKRITNGFKESLGEGAHGSVFKGMLSQEILVAVKVLNETQ 675
Query: 61 NKKIDEQFMAEVGTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLF---HETK 117
D F+ EVGT+G+IHH N+VRL GFC + ALVY++ NGSL +L ++
Sbjct: 676 GDGND--FINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQNFLAPPENKEV 849
Query: 118 VLGYEKLHEIAIGTARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNR 177
LG EKL IA+G ARGI YLH C HRI+H+DI P N+L+D N PK+ DFGLAK C +
Sbjct: 850 FLGREKLQRIALGVARGIEYLHIGCDHRILHFDINPHNVLIDDNLSPKITDFGLAKLCPK 1029
Query: 178 ENTHITMTGGRGTPGYAAPELWMP--FPITHKCDVYSFGMLLFEIIGRRRNLAIKNTES- 234
+ ++MT RGT GY APE++ +++K D+YS+GMLL E++G R+N E+
Sbjct: 1030NQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNQSAKETF 1209
Query: 235 QEWFPIWV 242
Q +P W+
Sbjct: 1210QVLYPEWI 1233
Score = 30.0 bits (66), Expect(2) = 1e-57
Identities = 12/28 (42%), Positives = 18/28 (63%)
Frame = +2
Query: 262 EKNKEIAERMIKVALWCVQYRPELRPIM 289
E + IA+++ V LWC+Q+ P RP M
Sbjct: 1280 EGDVRIAKKLALVGLWCIQWNPVDRPSM 1363
>TC78270 similar to GP|16649103|gb|AAL24403.1 Unknown protein {Arabidopsis
thaliana}, partial (80%)
Length = 1463
Score = 212 bits (539), Expect = 2e-55
Identities = 131/333 (39%), Positives = 188/333 (56%), Gaps = 6/333 (1%)
Frame = +3
Query: 16 FTGQQLRIATDNYS--NLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAEVG 73
+T ++L+IA+DN+S N +G GGFG+VYKG+ G + A+KVL S + + E F+ E+
Sbjct: 273 YTYKELKIASDNFSPANKIGEGGFGSVYKGVLKGGKLAAIKVLSTESKQGVKE-FLTEIN 449
Query: 74 TIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLF---HETKVLGYEKLHEIAIG 130
I I H NLV LYG C E + LVY Y+ N SL + L H ++ I +G
Sbjct: 450 VISEIKHENLVILYGCCVEGDHRILVYNYLENNSLSQTLLAGGHSNIYFDWQTRRRICLG 629
Query: 131 TARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRGT 190
ARG+A+LHEE I+H DIK NILLDK+ PK++DFGLAK TH++ T GT
Sbjct: 630 VARGLAFLHEEVLPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPSYMTHVS-TRVAGT 806
Query: 191 PGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLAIKNTESQEWFPIWVWKKKDAGL 250
GY APE + +T K D+YSFG+LL EI+ R N + + ++ W+ +
Sbjct: 807 IGYLAPEYAIRGQLTRKADIYSFGVLLVEIVSGRSNTNTRLPIADQYILETTWQLYERKE 986
Query: 251 LGEAMIVCGIEEKNKEIAERMIKVALWCVQYRPELRPIMSVVVKMLEGSLEIPKTFNPFQ 310
L + + + E + E A +++K+AL C Q P+LRP MS VVKML G ++I +T
Sbjct: 987 LAQLVDISLNGEFDAEEACKILKIALLCTQDTPKLRPTMSSVVKMLTGEMDINETKITKP 1166
Query: 311 HLI-DGTEFTTHSVQESNTYTTSVSSVMVSDSS 342
LI D + +++ T+ SS S SS
Sbjct: 1167GLISDVMDLKIREPKKNINMGTAPSSYNASSSS 1265
>CB892238 weakly similar to GP|21741394|em OSJNBb0051N19.7 {Oryza sativa},
partial (61%)
Length = 726
Score = 206 bits (524), Expect = 1e-53
Identities = 106/228 (46%), Positives = 151/228 (65%), Gaps = 6/228 (2%)
Frame = +3
Query: 1 MDKFLNDMEREKPIRFTGQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSS 60
++ FL D R+ +++ TD++ LG GGFG VYKG NG VA+K+L +S
Sbjct: 45 IEAFLKDHGALLQKRYKYSEIKKMTDSFKVKLGQGGFGVVYKGKLFNGCHVAIKIL--NS 218
Query: 61 NKKIDEQFMAEVGTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFHE----T 116
+K E+F+ EV +I R H N+V L GFCFE AL+YE+M NGSLD++++++
Sbjct: 219 SKGNGEEFINEVSSITRTSHVNVVTLLGFCFEGTKKALIYEFMSNGSLDKFIYNKGPETI 398
Query: 117 KVLGYEKLHEIAIGTARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCN 176
L +E L++IA G ARG+ YLH C RI+H+DIKP NILLD+N PK++DFGLAK C
Sbjct: 399 ASLSWENLYQIAKGIARGLEYLHRGCTTRILHFDIKPHNILLDENLCPKISDFGLAKLCP 578
Query: 177 RENTHITMTGGRGTPGYAAPELWMPF--PITHKCDVYSFGMLLFEIIG 222
++ + I+M+ RGT GY APE+W ++HK DVYS+GM+L E++G
Sbjct: 579 KQESIISMSDQRGTMGYVAPEVWNRHFGGVSHKSDVYSYGMMLLEMVG 722
>TC88193 similar to PIR|G96602|G96602 probable receptor protein kinase
F14G9.24 [imported] - Arabidopsis thaliana, partial
(20%)
Length = 1815
Score = 193 bits (491), Expect(2) = 4e-53
Identities = 109/266 (40%), Positives = 157/266 (58%), Gaps = 2/266 (0%)
Frame = +3
Query: 13 PIRFTGQQLRIATDNYS--NLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMA 70
P F+ +L+ AT +++ N LG GGFG VYKG ++G VAVK L S++ QF+A
Sbjct: 531 PNTFSYYELKNATSDFNRDNKLGEGGFGPVYKGTLNDGRFVAVKQLSIGSHQG-KSQFIA 707
Query: 71 EVGTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFHETKVLGYEKLHEIAIG 130
E+ TI + H NLV+LYG C E N LVYEY+ N SLD+ LF L + +++ +G
Sbjct: 708 EIATISAVQHRNLVKLYGCCIEGNKRLLVYEYLENKSLDQALFGNVLFLNWSTRYDVCMG 887
Query: 131 TARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRGT 190
ARG+ YLHEE + RI+H D+K NILLD PK++DFGLAK + + THI+ T GT
Sbjct: 888 VARGLTYLHEESRLRIVHRDVKASNILLDSELVPKLSDFGLAKLYDDKKTHIS-TRVAGT 1064
Query: 191 PGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLAIKNTESQEWFPIWVWKKKDAGL 250
GY APE M +T K DV+SFG++ E++ R N E + + W W+ +
Sbjct: 1065IGYLAPEYAMRGRLTEKADVFSFGVVALELVSGRPNSDSSLEEDKMYLLDWAWQLHERNC 1244
Query: 251 LGEAMIVCGIEEKNKEIAERMIKVAL 276
+ + +I + E N E ER++ + +
Sbjct: 1245IND-LIDPRLSEFNMEEVERLVGIGI 1319
Score = 32.7 bits (73), Expect(2) = 4e-53
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 14/83 (16%)
Frame = +1
Query: 275 ALW-----CVQYRPELRPIMSVVVKMLEGSLEIPKTFNPFQHLIDG---------TEFTT 320
ALW C Q P LRP MS VV ML G +E+ + ++ D T+ +
Sbjct: 1300 ALWE*GLLCTQTSPNLRPSMSRVVAMLLGDIEVSTVTSRPEYWTDWKFGDVSSIMTDTSA 1479
Query: 321 HSVQESNTYTTSVSSVMVSDSSI 343
+ SN Y ++ S+ +VS + I
Sbjct: 1480 EGLDTSN-YNSTASTSIVSGAYI 1545
>TC80512 weakly similar to PIR|A96693|A96693 probable receptor
serine/threonine kinase PR5K T4O24.7 [imported] -
Arabidopsis thaliana, partial (35%)
Length = 1077
Score = 199 bits (506), Expect = 1e-51
Identities = 103/243 (42%), Positives = 158/243 (64%), Gaps = 8/243 (3%)
Frame = +1
Query: 15 RFTGQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAEVGT 74
R++ +++ T+++ + LG GG+G VYK ++G VAVKV+ S E+F+ EV +
Sbjct: 295 RYSYAEVKRITNSFRDKLGHGGYGVVYKASLTDGRQVAVKVINESKGN--GEEFINEVAS 468
Query: 75 IGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFHE---TKVLGYEK--LHEIAI 129
I R H N+V L G+C+E N AL+YE+M GSL+++++ V ++ L +IAI
Sbjct: 469 ISRTSHMNIVSLLGYCYEANKRALIYEFMPKGSLNKFIYKSGFPDAVCDFDSNTLFQIAI 648
Query: 130 GTARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRG 189
G ARG+ YLH+ C RI+H DIKP NILLD+NF PK++DFGLAK C ++ +++ G RG
Sbjct: 649 GIARGLEYLHQGCSSRILHLDIKPQNILLDENFCPKISDFGLAKICQMNDSIVSIPGTRG 828
Query: 190 TPGYAAPELWMPF--PITHKCDVYSFGMLLFEIIGRRRNLAIKNT-ESQEWFPIWVWKKK 246
T GY APE++ +++K DVYS+GML+ E+IG R+N + S+ +FP W++K
Sbjct: 829 TIGYMAPEVFSRAFGGVSYKSDVYSYGMLILEMIGGRKNYQTGGSCTSEMYFPDWIYKDL 1008
Query: 247 DAG 249
+ G
Sbjct: 1009EQG 1017
>TC80500 similar to PIR|G96602|G96602 probable receptor protein kinase
F14G9.24 [imported] - Arabidopsis thaliana, partial
(13%)
Length = 1015
Score = 197 bits (501), Expect = 5e-51
Identities = 118/305 (38%), Positives = 172/305 (55%), Gaps = 9/305 (2%)
Frame = +1
Query: 42 KGIFSNGTMVAVKVLRGSSNKKIDEQFMAEVGTIGRIHHFNLVRLYGFCFERNLIALVYE 101
+GI ++G VAVK L S++ QF+AE+ TI + H NLV+LYG C E + LVYE
Sbjct: 19 QGILNDGRDVAVKQLSIGSHQG-KSQFVAEIATISAVQHRNLVKLYGCCIEGSKRLLVYE 195
Query: 102 YMGNGSLDRYLFHETKVLGYEKLHEIAIGTARGIAYLHEECQHRIIHYDIKPGNILLDKN 161
Y+ N SLD+ LF L + ++I +G ARG+ YLHEE + RI+H D+K NILLD
Sbjct: 196 YLENKSLDQALFGNVLFLNWSTRYDICMGVARGLTYLHEESRLRIVHRDVKASNILLDSE 375
Query: 162 FYPKVADFGLAKNCNRENTHITMTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEII 221
PK++DFGLAK + + THI+ T GT GY APE M +T K DV+SFG++ E++
Sbjct: 376 LVPKISDFGLAKLYDDKKTHIS-TRVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALELV 552
Query: 222 GRRRNLAIKNTESQEWFPIWVWKKKDAGLLGEAMIVCGIEEKNKEIAERMIKVALWCVQY 281
R N + + W W+ + + E +I + E NKE +R++ +AL C Q
Sbjct: 553 SGRPNSDSTLEGEKMYLLEWAWQLHERNTINE-LIDPRLSEFNKEEVQRLVGIALLCTQT 729
Query: 282 RPELRPIMSVVVKMLEGSLEIPKTFNPFQHLIDG---------TEFTTHSVQESNTYTTS 332
P LRP MS VV ML G +E+ + +L D T+ + + SN +T+
Sbjct: 730 SPTLRPSMSRVVAMLSGDIEVGTVTSRPGYLTDWKFDDVSSIMTDVSAKGLDTSNYNSTA 909
Query: 333 VSSVM 337
+S++
Sbjct: 910 STSIV 924
>TC80565 weakly similar to GP|14335072|gb|AAK59800.1 AT5g20050/F28I16_200
{Arabidopsis thaliana}, partial (81%)
Length = 1581
Score = 197 bits (500), Expect = 7e-51
Identities = 118/315 (37%), Positives = 187/315 (58%), Gaps = 19/315 (6%)
Frame = +2
Query: 19 QQLRIATDNYSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAEVGTIGRI 78
+ L+ DN+ ++G G +V+KGI ++GT VAVK + G ++ + +F +EV I +
Sbjct: 401 KNLKKQXDNFQAIIGKGSSASVFKGILNDGTSVAVKRIHGE--ERGEREFRSEVSAIASV 574
Query: 79 HHFNLVRLYGFCFERNLIA-LVYEYMGNGSLDRYLF--HETKV-----LGYEKLHEIAIG 130
H NLVRL+G+C LVYE++ NGSLD ++F ET+ L + +++AI
Sbjct: 575 QHVNLVRLFGYCNSPTPPRYLVYEFIPNGSLDCWIFPVKETRTRRCGCLPWNLRYKVAID 754
Query: 131 TARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRGT 190
A+ ++YLH +C+ ++H D+KP NILLD+N+ V+DFGL+K ++ + + +T RGT
Sbjct: 755 VAKALSYLHHDCRSTVLHLDVKPENILLDENYKALVSDFGLSKLVGKDESQV-LTTIRGT 931
Query: 191 PGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLA-----IKNTESQ-EWFPIWVWK 244
GY APE + I+ K D+YSFGM+L EI+G RRN++ NT+ + ++FP V +
Sbjct: 932 RGYLAPEWLLERGISEKTDIYSFGMVLLEIVGGRRNVSKVEDPRDNTKKKWQFFPKIVNE 1111
Query: 245 KKDAGLLGE-----AMIVCGIEEKNKEIAERMIKVALWCVQYRPELRPIMSVVVKMLEGS 299
K G L E + G++E +R++ +ALWC+Q +P LRP M VV MLEG
Sbjct: 1112KLREGKLMEIVDQRVVDFGGVDENE---VKRLVFIALWCIQEKPRLRPSMVEVVDMLEGR 1282
Query: 300 LEIPKTFNPFQHLID 314
+ + + L+D
Sbjct: 1283VRVEEPPGTRMILVD 1327
>CA916960 weakly similar to GP|14090203|db putative receptor kinase {Oryza
sativa (japonica cultivar-group)}, partial (27%)
Length = 651
Score = 196 bits (499), Expect = 9e-51
Identities = 96/195 (49%), Positives = 135/195 (69%), Gaps = 3/195 (1%)
Frame = +2
Query: 1 MDKFLNDMEREKPIRFTGQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSS 60
++KFL D KP R++ +++ T+N+ ++LG G +GTVYKG S VAVK+L S
Sbjct: 71 IEKFLEDYRALKPTRYSYVEIKRITNNFGDMLGQGAYGTVYKGSISKEFSVAVKILNVSQ 250
Query: 61 NKKIDEQFMAEVGTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLF---HETK 117
D F+ EVGT+GRIHH N+VRL GFC + AL+YE++ NGSL +++ ++
Sbjct: 251 GNGQD--FLNEVGTMGRIHHVNIVRLIGFCADGFKRALIYEFLPNGSLQKFINSPDNKKN 424
Query: 118 VLGYEKLHEIAIGTARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNR 177
LG++KLHEIA+G A+GI YLH+ C RI+H+DIKP N+LLD NF PK+ DFGLAK C+R
Sbjct: 425 FLGWKKLHEIALGIAKGIEYLHQGCDQRILHFDIKPQNVLLDHNFIPKICDFGLAKLCSR 604
Query: 178 ENTHITMTGGRGTPG 192
+ + ++MT RGT G
Sbjct: 605 DQSIVSMTAARGTLG 649
>TC90404 similar to GP|21593619|gb|AAM65586.1 receptor protein kinase-like
protein {Arabidopsis thaliana}, partial (52%)
Length = 1252
Score = 175 bits (444), Expect(2) = 5e-50
Identities = 100/224 (44%), Positives = 138/224 (60%), Gaps = 2/224 (0%)
Frame = +3
Query: 15 RFTGQQLRIATDNYS--NLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAEV 72
RF+ ++L++AT+N+S NL+G GGFG VYKG+ S+GT++AVK L+ + + QF EV
Sbjct: 48 RFSFRELQVATNNFSSKNLVGKGGFGNVYKGVLSDGTVIAVKRLKDGNAIGGEIQFQTEV 227
Query: 73 GTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFHETKVLGYEKLHEIAIGTA 132
I H NL+RLYGFC + LVY YM NGS+ L VL + IA+G A
Sbjct: 228 EMISLAVHRNLLRLYGFCMTSSERLLVYPYMCNGSVASRL-KGKPVLDWGTRKNIALGAA 404
Query: 133 RGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRGTPG 192
RG+ YLHE+C +IIH D+K NILLD + V DFGLAK + +++H+T T RGT G
Sbjct: 405 RGLLYLHEQCDPKIIHRDVKAANILLDNYYEAVVGDFGLAKLLDHQDSHVT-TAVRGTVG 581
Query: 193 YAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLAIKNTESQE 236
+ APE + K DV+ FG+LL E+I +R L +Q+
Sbjct: 582 HIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQK 713
Score = 40.4 bits (93), Expect(2) = 5e-50
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1
Query: 269 ERMIKVALWCVQYRPELRPIMSVVVKMLEG 298
E M++VAL C QY P RP MS VV+MLEG
Sbjct: 814 EEMVQVALLCTQYLPSHRPKMSEVVRMLEG 903
>TC78763 somatic embryogenesis receptor kinase 1 [Medicago truncatula]
Length = 2737
Score = 187 bits (475), Expect = 5e-48
Identities = 119/294 (40%), Positives = 167/294 (56%), Gaps = 10/294 (3%)
Frame = +3
Query: 15 RFTGQQLRIATDNYSN--LLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAEV 72
RF+ ++L++ATD +SN +LG GGFG VYKG ++G++VAVK L+ + QF EV
Sbjct: 1293 RFSLRELQVATDTFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEV 1472
Query: 73 GTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFH---ETKVLGYEKLHEIAI 129
I H NL+RL GFC LVY YM NGS+ L + L + IA+
Sbjct: 1473 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPHQEPLDWPTRKRIAL 1652
Query: 130 GTARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRG 189
G+ARG++YLH+ C +IIH D+K NILLD+ F V DFGLAK + ++TH+T T RG
Sbjct: 1653 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRG 1829
Query: 190 TPGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLAIKNTESQEWFPIWVWKKKDAG 249
T G+ APE + K DV+ +G++L E+I +R + + + + W K G
Sbjct: 1830 TIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVK---G 2000
Query: 250 LLGEAMIVCGIEEKNK-----EIAERMIKVALWCVQYRPELRPIMSVVVKMLEG 298
LL E + ++ K E++I+VAL C Q P RP MS VV+MLEG
Sbjct: 2001 LLKEKKLEMLVDPDLKTNYIEAEVEQLIQVALLCTQGSPMDRPKMSDVVRMLEG 2162
>TC80518 weakly similar to PIR|T49986|T49986 lectin-like protein kinase-like
- Arabidopsis thaliana, partial (34%)
Length = 1260
Score = 183 bits (465), Expect = 8e-47
Identities = 119/342 (34%), Positives = 186/342 (53%), Gaps = 12/342 (3%)
Frame = +1
Query: 13 PIRFTGQQLRIATDNYSN--LLGSGGFGTVYKGIFSN-GTMVAVKVLRGSSNKKIDEQFM 69
P +F ++L +T+N++N +G+GGFG VYKG + VA+K + SN+ + E +
Sbjct: 10 PKKFIYEELARSTNNFANEHKIGAGGFGAVYKGFIRDLKHHVAIKKVSKESNQGVKE-YA 186
Query: 70 AEVGTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFHETKVLGYEKLHEIAI 129
+EV I ++ H NLV+LYG+C ++N + LVYE++ NGSLD Y+F +L + + IA
Sbjct: 187 SEVKVISQLRHKNLVQLYGWCHKQNDLLLVYEFVENGSLDSYIFKGKGLLIWTVRYNIAR 366
Query: 130 GTARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRG 189
G A + YLHEEC+H ++H DIK N++LD NF K+ DFGLA+ N E T T G
Sbjct: 367 GLASALLYLHEECEHCVLHRDIKSSNVMLDSNFNTKLGDFGLARLMNHE-TESKTTVLAG 543
Query: 190 TPGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLAIKNTESQEWFPIWVWKKKDAG 249
T GY +PE + + DVYSFG++ EI R+ + +E + WV + G
Sbjct: 544 TYGYLSPEAATRGKASRESDVYSFGVVALEIACGRKAIEPSLSEEHIYLVDWVCELYGNG 723
Query: 250 LLGEAMIVCGIEEKNKEIAERMIKVALWCVQYRPELRPIMSVVVKMLEGSLEIP------ 303
L +A E N++ ER++ V LWC RP++ VV++L +P
Sbjct: 724 DLLKAADSRLYGEFNEKEVERLMIVGLWCTHTDHLQRPMIRQVVQVLNFDAPLPNLPLQM 903
Query: 304 --KTFN-PFQHLIDGTEFTTHSVQESNTYTTSVSSVMVSDSS 342
T+N F + ++ + ++ T T+S S++ S S
Sbjct: 904 NASTYNTSFNSVYSKSKISGFENNQTGTSTSSDSTITGSSQS 1029
>TC88105 similar to GP|21593085|gb|AAM65034.1 Putative protein kinase
{Arabidopsis thaliana}, partial (72%)
Length = 2379
Score = 182 bits (461), Expect = 2e-46
Identities = 114/288 (39%), Positives = 164/288 (56%), Gaps = 6/288 (2%)
Frame = +2
Query: 16 FTGQQLRIATDNYS--NLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAEVG 73
FT + L +AT+ +S N++G GG+G VY+G NG VA+K L + + +++F EV
Sbjct: 689 FTLRDLELATNKFSKDNIIGEGGYGVVYQGQLINGNPVAIKKLLNNLGQA-EKEFRVEVE 865
Query: 74 TIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFHETKVLGY---EKLHEIAIG 130
IG + H NLVRL GFC E L+YEY+ NG+L+++L + GY + +I +G
Sbjct: 866 AIGHVRHKNLVRLLGFCIEGTHRLLIYEYVNNGNLEQWLHGAMRQYGYLTWDARIKILLG 1045
Query: 131 TARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRGT 190
TA+ +AYLHE + +++H DIK NIL+D +F K++DFGLAK +HIT T GT
Sbjct: 1046TAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHIT-TRVMGT 1222
Query: 191 PGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLAIKNTESQEWFPIWVWKKKDAGL 250
GY APE + K DVYSFG+LL E I R + + ++ W+ K
Sbjct: 1223FGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYNRSAAEVNLVDWL-KMMVGNR 1399
Query: 251 LGEAMIVCGIEEKNKEIA-ERMIKVALWCVQYRPELRPIMSVVVKMLE 297
E ++ IE + A +R++ AL CV E RP MS VV+MLE
Sbjct: 1400HAEEVVDPNIETRPSTSALKRVLLTALRCVDPDSEKRPKMSQVVRMLE 1543
>TC92229 similar to PIR|B86369|B86369 hypothetical protein AAC98010.1
[imported] - Arabidopsis thaliana, partial (44%)
Length = 1347
Score = 181 bits (460), Expect = 3e-46
Identities = 115/328 (35%), Positives = 181/328 (55%), Gaps = 8/328 (2%)
Frame = +2
Query: 14 IRFTGQQLRIATDNYS--NLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAE 71
I F+ Q+ T+ +S N++G GGFG VYK + +G + A+K+L+ S + + +F AE
Sbjct: 152 ILFSYDQILEITNGFSSENVIGEGGFGRVYKALMPDGRVGALKLLKAGSGQG-EREFRAE 328
Query: 72 VGTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFHETK--VLGYEKLHEIAI 129
V TI R+HH +LV L G+C L+YE++ NG+LD++L HE++ VL + K +IAI
Sbjct: 329 VDTISRVHHRHLVSLIGYCIAEQQRVLIYEFVPNGNLDQHL-HESQWNVLDWPKRMKIAI 505
Query: 130 GTARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRG 189
G ARG+AYLHE C +IIH DIK NILLD ++ +VADFGLA+ + NTH++ T G
Sbjct: 506 GAARGLAYLHEGCNPKIIHRDIKSSNILLDDSYEAQVADFGLARLTDDTNTHVS-TRVMG 682
Query: 190 TPGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNL----AIKNTESQEWFPIWVWKK 245
T GY APE +T + DV+SFG++L E++ R+ + + + EW + +
Sbjct: 683 TFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDPTQPVGDESLVEWARPILLRA 862
Query: 246 KDAGLLGEAMIVCGIEEKNKEIAERMIKVALWCVQYRPELRPIMSVVVKMLEGSLEIPKT 305
+ G E + RMI+ A C+++ RP M + + L+
Sbjct: 863 IETGDFSELADPRLHRQYIDSEMFRMIEAAAACIRHSAPKRPRMVQIARALDSG------ 1024
Query: 306 FNPFQHLIDGTEFTTHSVQESNTYTTSV 333
+ L +G +F ++ +S Y +
Sbjct: 1025-DQLYDLSNGVKFGQSTIYDSGQYNEDI 1105
>TC79033 similar to GP|21554229|gb|AAM63304.1 somatic embryogenesis
receptor-like kinase putative {Arabidopsis thaliana},
partial (77%)
Length = 1762
Score = 180 bits (456), Expect = 9e-46
Identities = 122/300 (40%), Positives = 172/300 (56%), Gaps = 10/300 (3%)
Frame = +1
Query: 9 EREKPIR-FTGQQLRIATDN--YSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKID 65
+++ P R F+ ++L AT+N Y N LG GGFG+VY G +G+ +AVK L+ SNK D
Sbjct: 403 KKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKA-D 579
Query: 66 EQFMAEVGTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLF--HETK-VLGYE 122
+F EV + R+ H NL+ L G+C E +VY+YM N SL +L H T+ +L +
Sbjct: 580 MEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSTESLLDWN 759
Query: 123 KLHEIAIGTARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHI 182
+ IAIG+A GI YLH + IIH D+K N+LLD +F +VADFG AK TH+
Sbjct: 760 RRMNIAIGSAEGIVYLHVQATPHIIHRDVKASNVLLDSDFQARVADFGFAKLIPDGATHV 939
Query: 183 TMTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLAIKNTESQ----EWF 238
T T +GT GY APE M CDVYSFG+LL E+ ++ L ++ + +W
Sbjct: 940 T-TRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPLEKLSSSVKRAINDWA 1116
Query: 239 PIWVWKKKDAGLLGEAMIVCGIEEKNKEIAERMIKVALWCVQYRPELRPIMSVVVKMLEG 298
+KK + L + +EE+ K R+I VAL C Q +PE RP M VV++L+G
Sbjct: 1117LPLACEKKFSELADPRLNGDYVEEELK----RVILVALICAQNQPEKRPTMVEVVELLKG 1284
>TC89307 similar to GP|21741394|emb|CAD39676. OSJNBb0051N19.7 {Oryza
sativa}, partial (58%)
Length = 814
Score = 134 bits (337), Expect(2) = 2e-44
Identities = 64/138 (46%), Positives = 97/138 (69%), Gaps = 8/138 (5%)
Frame = +2
Query: 97 ALVYEYMGNGSLDRYLFHETKVL------GYEKLHEIAIGTARGIAYLHEECQHRIIHYD 150
AL+Y+YM NGSL+++++ L + ++ IAIG ARG+ YLH+ C +I+H+D
Sbjct: 401 ALIYDYMPNGSLEKFIYENKDPLKLNLQLSCKTVYNIAIGVARGLEYLHKGCNTKILHFD 580
Query: 151 IKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRGTPGYAAPELWMP--FPITHKC 208
IKP NILLD +F PKV+DFGLAK C R+ + I++ G RGT GY APE++ ++HK
Sbjct: 581 IKPHNILLDDDFCPKVSDFGLAKVCPRKESIISLLGARGTAGYIAPEVFSRNFGGVSHKS 760
Query: 209 DVYSFGMLLFEIIGRRRN 226
DVY++GM++ E++G ++N
Sbjct: 761 DVYNYGMMVLEMVGGKQN 814
Score = 62.8 bits (151), Expect(2) = 2e-44
Identities = 33/78 (42%), Positives = 51/78 (65%)
Frame = +3
Query: 15 RFTGQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAEVGT 74
R+T +++ AT+++ LG GG+G+VYKG +G++VAVKVL S ++ E+F+ EV +
Sbjct: 162 RYTYAEIKKATNSFKYKLGQGGYGSVYKGKLQDGSLVAVKVL--SESEGNGEEFINEVAS 335
Query: 75 IGRIHHFNLVRLYGFCFE 92
I H N+V L GF E
Sbjct: 336 ISVTSHVNIVGLLGFYLE 389
>TC77448 SYMRK; MtSYMRK [Medicago truncatula]; nod region linked receptor
kinase [Medicago truncatula]
Length = 3568
Score = 175 bits (443), Expect = 3e-44
Identities = 114/311 (36%), Positives = 163/311 (51%), Gaps = 12/311 (3%)
Frame = +1
Query: 16 FTGQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAEVGTI 75
FT + + AT+ Y L+G GGFG+VY+G +G VAVKV R S++ + +F E+ +
Sbjct: 2128 FTLEYIEQATEQYKTLIGEGGFGSVYRGTLDDGQEVAVKV-RSSTSTQGTREFDNELNLL 2304
Query: 76 GRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFHET---KVLGYEKLHEIAIGTA 132
I H NLV L G+C E + LVY +M NGSL L+ E K+L + IA+G A
Sbjct: 2305 SAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAA 2484
Query: 133 RGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHITMTGGRGTPG 192
RG+AYLH +IH D+K NILLD++ KVADFG +K +E RGT G
Sbjct: 2485 RGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAG 2664
Query: 193 YAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLAIKNTESQ----EWFPIWVWKKK-- 246
Y PE + ++ K DV+SFG++L EI+ R L IK + EW ++ K
Sbjct: 2665 YLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVD 2844
Query: 247 ---DAGLLGEAMIVCGIEEKNKEIAERMIKVALWCVQYRPELRPIMSVVVKMLEGSLEIP 303
D G+ G + E R+++VAL C++ RP M +V+ LE +L I
Sbjct: 2845 EIVDPGIKG---------GYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIE 2997
Query: 304 KTFNPFQHLID 314
+ + ID
Sbjct: 2998 NNASEYMKSID 3030
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.322 0.139 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,195,160
Number of Sequences: 36976
Number of extensions: 163185
Number of successful extensions: 2155
Number of sequences better than 10.0: 664
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of query: 362
length of database: 9,014,727
effective HSP length: 97
effective length of query: 265
effective length of database: 5,428,055
effective search space: 1438434575
effective search space used: 1438434575
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Medicago: description of AC130275.4