TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC129091.17 + phase: 0 /pseudo
         (136 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC83125 similar to PIR|T05841|T05841 spliceosome-associated prot...   246  2e-66
TC90087 similar to PIR|T05841|T05841 spliceosome-associated prot...   181  8e-47
TC77856 similar to SP|O04336|WR21_ARATH Probable WRKY transcript...    41  2e-04
TC76523 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - ...    36  0.005
TC76514 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - ...    36  0.005
TC87729 similar to GP|9759461|dbj|BAB10377.1 gene_id:MAF19.15~un...    34  0.020
TC85757 similar to PIR|T09648|T09648 nucleolin homolog nuM1 - al...    33  0.027
TC89440 similar to PIR|T49211|T49211 hypothetical protein F27K19...    33  0.035
TC83583 similar to PIR|T06379|T06379 SAR DNA-binding protein 2 -...    33  0.046
TC87017 similar to PIR|A96564|A96564 unknown protein  23094-2177...    32  0.060
TC77438 homologue to PIR|T06807|T06807 nucleosome assembly prote...    32  0.078
TC78700 similar to GP|21554835|gb|AAM63703.1 unknown {Arabidopsi...    32  0.10
TC90397 similar to GP|15010740|gb|AAK74029.1 AT5g59730/mth12_130...    31  0.13
TC81158 similar to GP|9280664|gb|AAF86533.1| F21B7.15 {Arabidops...    31  0.17
TC76402 weakly similar to GP|18086561|gb|AAL57705.1 At2g01100/F2...    31  0.17
AW689515 homologue to GP|1066501|gb|A serine/threonine protein k...    31  0.17
TC87239 similar to PIR|T09028|T09028 hypothetical protein T27E11...    30  0.23
TC83625 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana taba...    30  0.23
AA660448 similar to PIR|C61615|C616 sericin MG-2 - greater wax m...    30  0.23
TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana taba...    30  0.23

>TC83125 similar to PIR|T05841|T05841 spliceosome-associated protein homolog
           F17L22.120 - Arabidopsis thaliana, partial (24%)
          Length = 722

 Score =  246 bits (628), Expect = 2e-66
 Identities = 123/123 (100%), Positives = 123/123 (100%)
 Frame = +2

Query: 1   MDEEFRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVS 60
           MDEEFRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVS
Sbjct: 275 MDEEFRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVS 454

Query: 61  NKKKKLQRRMKIAELKQVSSRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWSQKRKF 120
           NKKKKLQRRMKIAELKQVSSRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWSQKRKF
Sbjct: 455 NKKKKLQRRMKIAELKQVSSRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWSQKRKF 634

Query: 121 LQG 123
           LQG
Sbjct: 635 LQG 643


>TC90087 similar to PIR|T05841|T05841 spliceosome-associated protein homolog
           F17L22.120 - Arabidopsis thaliana, partial (12%)
          Length = 733

 Score =  181 bits (459), Expect = 8e-47
 Identities = 94/123 (76%), Positives = 107/123 (86%)
 Frame = +2

Query: 1   MDEEFRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVS 60
           +DEEF+KIFEKFSF+EV  SE+ DKKD + E A TKKKA+SDS  E+EE+DNEQKEKGVS
Sbjct: 365 LDEEFKKIFEKFSFSEVIDSEDNDKKDESAENAITKKKADSDS--EEEEDDNEQKEKGVS 538

Query: 61  NKKKKLQRRMKIAELKQVSSRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWSQKRKF 120
           NKKKKLQRRMKIAELKQ+S+RPDVVEVWDAT+ADPKLLVFLKSYRNTV + + W  K KF
Sbjct: 539 NKKKKLQRRMKIAELKQISARPDVVEVWDATSADPKLLVFLKSYRNTV-LXQPWLSKXKF 715

Query: 121 LQG 123
           L G
Sbjct: 716 LPG 724


>TC77856 similar to SP|O04336|WR21_ARATH Probable WRKY transcription factor
           21 (WRKY DNA-binding protein 21). [Mouse-ear cress],
           partial (6%)
          Length = 1156

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 21/27 (77%), Positives = 23/27 (84%)
 Frame = +3

Query: 63  KKKLQRRMKIAELKQVSSRPDVVEVWD 89
           +K  QRRMKIAEL+QVSSRPDVVE  D
Sbjct: 429 RKIRQRRMKIAELEQVSSRPDVVEKKD 509


>TC76523 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - alfalfa,
           partial (69%)
          Length = 1615

 Score = 35.8 bits (81), Expect = 0.005
 Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
 Frame = +3

Query: 19  ASEETDKKDVAEETAATKK--KANSDSDYEDEENDNEQKEKGVSNKKK 64
           + E+ D K V++  A  KK  K +SDSD ED+++ +++ +K V+ KK+
Sbjct: 192 SDEDEDAKPVSKPAAVAKKSKKDSSDSDDEDDDSSSDEDKKPVAAKKE 335


>TC76514 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - alfalfa,
           partial (61%)
          Length = 1288

 Score = 35.8 bits (81), Expect = 0.005
 Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
 Frame = +3

Query: 19  ASEETDKKDVAEETAATKK--KANSDSDYEDEENDNEQKEKGVSNKKK 64
           + E+ D K V++  A  KK  K +SDSD ED+++ +++ +K V+ KK+
Sbjct: 870 SDEDEDAKPVSKPAAVAKKSKKDSSDSDDEDDDSSSDEDKKPVAAKKE 1013



 Score = 34.7 bits (78), Expect = 0.012
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
 Frame = +3

Query: 19  ASEETDKKDVAEET----AATKKKANSDSDYEDEENDNEQKEKGVS 60
           +S+E DKK  A+ +    A TKK A+S  +  DEE+D ++  K VS
Sbjct: 765 SSDEEDKKPAAKASKNVSAPTKKAASSSDEESDEESDEDEDAKPVS 902



 Score = 26.6 bits (57), Expect = 3.3
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = +3

Query: 20  SEETDKKDVAEET-----AATKKKANSDSDYEDEENDNEQKEK 57
           S + DKK  A+       +A  KKA SD +  DE +D +++++
Sbjct: 549 SSDEDKKPAAKAVPSKNGSAPAKKAASDEEDTDESSDEDEEDE 677


>TC87729 similar to GP|9759461|dbj|BAB10377.1 gene_id:MAF19.15~unknown protein
            {Arabidopsis thaliana}, partial (37%)
          Length = 2210

 Score = 33.9 bits (76), Expect = 0.020
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
 Frame = +3

Query: 22   ETDKKDVAEETAATKKKANSDSDYEDEEND----------NEQKEKGVSNKKKKLQRRMK 71
            ET+  +  E   +  +  +S+++YEDEE D          +E +++G+  K K L+R+ K
Sbjct: 1626 ETEDDEEEERPRSRMRDDDSEAEYEDEEEDEQIEQENDASDEDEDEGLKQKSKNLKRKAK 1805



 Score = 26.6 bits (57), Expect = 3.3
 Identities = 18/82 (21%), Positives = 35/82 (41%), Gaps = 6/82 (7%)
 Frame = +1

Query: 21  EETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSNKKK------KLQRRMKIAE 74
           E+   +  AEE  + +K    +    DEE+  E +E+ +  K K       L+  + +  
Sbjct: 592 EQDSNRYPAEEEGSYEKSLRPEDILADEEHQYESEEENIEMKTKDKPLGPPLELEIPLRP 771

Query: 75  LKQVSSRPDVVEVWDATAADPK 96
              +  + +V +V +    DPK
Sbjct: 772 PPALPGKMNVFKVSNIMGVDPK 837


>TC85757 similar to PIR|T09648|T09648 nucleolin homolog nuM1 - alfalfa,
           partial (10%)
          Length = 1087

 Score = 33.5 bits (75), Expect = 0.027
 Identities = 17/43 (39%), Positives = 28/43 (64%), Gaps = 2/43 (4%)
 Frame = +3

Query: 24  DKKDVAEETAATKK--KANSDSDYEDEENDNEQKEKGVSNKKK 64
           D K V++     KK  K +SDSD ED++  +E+++K V+ KK+
Sbjct: 405 DAKSVSKPATVAKKSMKDSSDSDDEDDDTSSEEEKKPVAAKKE 533


>TC89440 similar to PIR|T49211|T49211 hypothetical protein F27K19.170 -
           Arabidopsis thaliana, partial (48%)
          Length = 1446

 Score = 33.1 bits (74), Expect = 0.035
 Identities = 21/69 (30%), Positives = 32/69 (45%), Gaps = 3/69 (4%)
 Frame = +3

Query: 3   EEFRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYE---DEENDNEQKEKGV 59
           E  +K  +K    E     +  KKDV EET   K   NS +  E   D++ D+++ ++ V
Sbjct: 519 ESLQKDTKKVVVEEDTVDVDDTKKDVVEETVTVKASKNSRTKPEKSVDDDEDSDEPQERV 698

Query: 60  SNKKKKLQR 68
             KK    R
Sbjct: 699 KVKKNCYDR 725


>TC83583 similar to PIR|T06379|T06379 SAR DNA-binding protein 2 - garden
           pea, partial (33%)
          Length = 852

 Score = 32.7 bits (73), Expect = 0.046
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +2

Query: 23  TDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSNKKKK 65
           TDKK   +E    KKK   + + ED E   E+  K    KKKK
Sbjct: 395 TDKKKEKKEKKEKKKKEKKEEEVEDVEEPEEEVVKKEKKKKKK 523


>TC87017 similar to PIR|A96564|A96564 unknown protein  23094-21772
           [imported] - Arabidopsis thaliana, partial (30%)
          Length = 1701

 Score = 32.3 bits (72), Expect = 0.060
 Identities = 20/56 (35%), Positives = 30/56 (52%), Gaps = 6/56 (10%)
 Frame = +3

Query: 16  EVAASEETDKK----DVAEETAATKKKANSDSDYEDEENDNEQKEKG--VSNKKKK 65
           E+ A E  DK     DVA+   A K  A  ++D ++ + DNEQ + G  + N+ KK
Sbjct: 420 EIKAPEVEDKSTSNNDVADRNNAGKDLAEKETDSDNSKVDNEQSKDGSKIENEDKK 587


>TC77438 homologue to PIR|T06807|T06807 nucleosome assembly protein 1 - garden
            pea, partial (93%)
          Length = 1607

 Score = 32.0 bits (71), Expect = 0.078
 Identities = 16/60 (26%), Positives = 30/60 (49%)
 Frame = +2

Query: 16   EVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSNKKKKLQRRMKIAEL 75
            E A  EE    D  ++      + + + + EDE+ D+++ E+    KKK   ++  IA+L
Sbjct: 1004 EAAQGEEFGDLDDEDDDEDDDAEDDDEDEDEDEDEDDDEDEEETKTKKKSSAKKSGIAQL 1183


>TC78700 similar to GP|21554835|gb|AAM63703.1 unknown {Arabidopsis
           thaliana}, partial (5%)
          Length = 687

 Score = 31.6 bits (70), Expect = 0.10
 Identities = 14/46 (30%), Positives = 28/46 (60%)
 Frame = +2

Query: 27  DVAEETAATKKKANSDSDYEDEENDNEQKEKGVSNKKKKLQRRMKI 72
           +V+E+    KKK +   + E++E +     +GV +KKKK ++R ++
Sbjct: 392 EVSEKKEKKKKKKSGSGEEEEKEKEVNLDGEGVGDKKKKKRKRDEV 529


>TC90397 similar to GP|15010740|gb|AAK74029.1 AT5g59730/mth12_130
           {Arabidopsis thaliana}, partial (22%)
          Length = 1162

 Score = 31.2 bits (69), Expect = 0.13
 Identities = 15/59 (25%), Positives = 33/59 (55%)
 Frame = +3

Query: 21  EETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSNKKKKLQRRMKIAELKQVS 79
           E  D + V+  ++  ++ + S SDY+DE +D+E+   G    + +    + +A+LK ++
Sbjct: 294 EHLDPESVSNRSSTDRRSSFSVSDYDDEVSDDEKFVVGNQISETERVSMLAMADLKAIA 470


>TC81158 similar to GP|9280664|gb|AAF86533.1| F21B7.15 {Arabidopsis
           thaliana}, partial (6%)
          Length = 890

 Score = 30.8 bits (68), Expect = 0.17
 Identities = 15/47 (31%), Positives = 28/47 (58%)
 Frame = +1

Query: 20  SEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSNKKKKL 66
           SE    +  +E + ++   + SDSD ED+E+D E +E+G  +  +K+
Sbjct: 433 SESESSESESESSTSSSSTSGSDSD-EDDEDDAEDEEEGQISDDEKM 570


>TC76402 weakly similar to GP|18086561|gb|AAL57705.1 At2g01100/F23H14.7
           {Arabidopsis thaliana}, partial (43%)
          Length = 1449

 Score = 30.8 bits (68), Expect = 0.17
 Identities = 15/64 (23%), Positives = 36/64 (55%)
 Frame = +3

Query: 20  SEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSNKKKKLQRRMKIAELKQVS 79
           S + +K+        TKK+++  SD+  +E+++  +E+    +KKK +++++  + +  S
Sbjct: 930 SGDHEKRKEKSSKWKTKKRSSESSDFSSDESESSSEEE--KRRKKKQRKKIRDQDSRSNS 1103

Query: 80  SRPD 83
           S  D
Sbjct: 1104SGSD 1115


>AW689515 homologue to GP|1066501|gb|A serine/threonine protein kinase
           {Arabidopsis thaliana}, partial (10%)
          Length = 675

 Score = 30.8 bits (68), Expect = 0.17
 Identities = 13/30 (43%), Positives = 23/30 (76%)
 Frame = +1

Query: 37  KKANSDSDYEDEENDNEQKEKGVSNKKKKL 66
           KK +SDSD ED++  +E+++K V+ KK+ +
Sbjct: 352 KKDSSDSDDEDDDRSSEEEKKLVAAKKENI 441


>TC87239 similar to PIR|T09028|T09028 hypothetical protein T27E11.130 -
           Arabidopsis thaliana, partial (69%)
          Length = 1228

 Score = 30.4 bits (67), Expect = 0.23
 Identities = 15/35 (42%), Positives = 20/35 (56%)
 Frame = +1

Query: 19  ASEETDKKDVAEETAATKKKANSDSDYEDEENDNE 53
           A+EE  K D A   AA +KKA    + ED++ D E
Sbjct: 319 AAEEKAKVDKAASVAAAEKKAKEVDEKEDDKKDGE 423


>TC83625 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana tabacum},
           partial (9%)
          Length = 908

 Score = 30.4 bits (67), Expect = 0.23
 Identities = 18/67 (26%), Positives = 33/67 (48%)
 Frame = +2

Query: 2   DEEFRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSN 61
           D+E ++  +K    +    E  DKKD  +     KKK   + + + EE D ++K+     
Sbjct: 566 DDEKKEKKDKEKKDKTDVDEGKDKKDKEK-----KKKEKKEENVKGEEEDGDEKKDKEKK 730

Query: 62  KKKKLQR 68
           KK+K ++
Sbjct: 731 KKEKKEK 751



 Score = 28.9 bits (63), Expect = 0.66
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +2

Query: 2   DEEFRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSN 61
           D+E +K  +K    +    +  +KKD  +     KKK   +   ED++ D E+K+     
Sbjct: 641 DKEKKKKEKKEENVKGEEEDGDEKKDKEK-----KKKEKKEKGKEDKDKDGEEKKSKKDK 805

Query: 62  KKKK 65
           +KKK
Sbjct: 806 EKKK 817



 Score = 28.9 bits (63), Expect = 0.66
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = +2

Query: 2   DEEFRKIFEKFSFTEVAASEETDKKDVAE----ETAATKKKANSDSDYEDEENDNEQKEK 57
           D E + + +     E    E+ DK DV E    +    KKK   + + + EE D ++K K
Sbjct: 539 DLEIKSVEKDDEKKEKKDKEKKDKTDVDEGKDKKDKEKKKKEKKEENVKGEEEDGDEK-K 715

Query: 58  GVSNKKKKLQRRMK 71
               KKK+ + + K
Sbjct: 716 DKEKKKKEKKEKGK 757


>AA660448 similar to PIR|C61615|C616 sericin MG-2 - greater wax moth
           (fragments), partial (7%)
          Length = 413

 Score = 30.4 bits (67), Expect = 0.23
 Identities = 24/65 (36%), Positives = 36/65 (54%), Gaps = 1/65 (1%)
 Frame = +1

Query: 6   RKIFEKF-SFTEVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSNKKK 64
           RK F K  SF+EV A     K+      ++ K+K +SD   +DEEN+++   +  S K K
Sbjct: 160 RKSFSKTTSFSEVXAVFXXKKE------SSRKRKKSSD---DDEENESDISSEEGSRKVK 312

Query: 65  KLQRR 69
           K +RR
Sbjct: 313 KEKRR 327


>TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana tabacum},
           partial (13%)
          Length = 663

 Score = 30.4 bits (67), Expect = 0.23
 Identities = 18/67 (26%), Positives = 33/67 (48%)
 Frame = +3

Query: 2   DEEFRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSN 61
           D+E ++  +K    +    E  DKKD  +     KKK   + + + EE D ++K+     
Sbjct: 174 DDEKKEKKDKEKKDKTDVDEGKDKKDKEK-----KKKEKKEENVKGEEEDGDEKKDKEKK 338

Query: 62  KKKKLQR 68
           KK+K ++
Sbjct: 339 KKEKKEK 359



 Score = 28.9 bits (63), Expect = 0.66
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +3

Query: 2   DEEFRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSN 61
           D+E +K  +K    +    +  +KKD  +     KKK   +   ED++ D E+K+     
Sbjct: 249 DKEKKKKEKKEENVKGEEEDGDEKKDKEK-----KKKEKKEKGKEDKDKDGEEKKSKKDK 413

Query: 62  KKKK 65
           +KKK
Sbjct: 414 EKKK 425



 Score = 28.9 bits (63), Expect = 0.66
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = +3

Query: 2   DEEFRKIFEKFSFTEVAASEETDKKDVAE----ETAATKKKANSDSDYEDEENDNEQKEK 57
           D E + + +     E    E+ DK DV E    +    KKK   + + + EE D ++K K
Sbjct: 147 DLEIKSVEKDDEKKEKKDKEKKDKTDVDEGKDKKDKEKKKKEKKEENVKGEEEDGDEK-K 323

Query: 58  GVSNKKKKLQRRMK 71
               KKK+ + + K
Sbjct: 324 DKEKKKKEKKEKGK 365



 Score = 27.3 bits (59), Expect = 1.9
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +3

Query: 2   DEEFRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSN 61
           D+E +K  +K    E    +  +KK   ++    KKK  ++ D E E+   ++K K    
Sbjct: 324 DKEKKKKEKKEKGKEDKDKDGEEKKSKKDKE---KKKDKNEDDDEGEDGSKKKKNKDKKE 494

Query: 62  KKKK 65
           KKK+
Sbjct: 495 KKKE 506


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.309    0.125    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,728,765
Number of Sequences: 36976
Number of extensions: 43312
Number of successful extensions: 381
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of query: 136
length of database: 9,014,727
effective HSP length: 86
effective length of query: 50
effective length of database: 5,834,791
effective search space: 291739550
effective search space used: 291739550
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 53 (25.0 bits)