BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC127428.5 + phase: 0
(851 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC88450 similar to PIR|F86427|F86427 auxin response factor 6 (AR... 708 0.0
TC79570 similar to PIR|F86427|F86427 auxin response factor 6 (AR... 483 e-141
TC88775 homologue to PIR|F86427|F86427 auxin response factor 6 (... 451 e-127
TC92002 similar to GP|4104929|gb|AAD02218.1| auxin response fact... 290 e-126
TC91430 similar to PIR|F86427|F86427 auxin response factor 6 (AR... 392 e-109
TC85977 similar to GP|10176918|dbj|BAB10162. auxin response fact... 231 e-100
TC82637 similar to PIR|G86331|G86331 IAA24 [imported] - Arabidop... 306 4e-99
TC88776 homologue to PIR|F86427|F86427 auxin response factor 6 (... 218 2e-89
TC83162 homologue to PIR|F86427|F86427 auxin response factor 6 (... 268 4e-77
BG646172 homologue to PIR|F86427|F86 auxin response factor 6 (AR... 278 5e-75
TC79906 similar to PIR|F86427|F86427 auxin response factor 6 (AR... 176 4e-45
BQ124121 similar to PIR|G86331|G863 IAA24 [imported] - Arabidops... 155 5e-38
TC89117 similar to GP|12484199|gb|AAG53998.1 auxin response tran... 154 2e-37
TC92362 similar to GP|19352047|dbj|BAB85917. auxin response fact... 140 3e-37
AW688064 homologue to GP|13272405|gb unknown protein {Arabidopsi... 149 6e-36
TC93578 similar to GP|9757747|dbj|BAB08228.1 auxin response fact... 86 7e-33
TC91303 similar to GP|4104931|gb|AAD02219.1| auxin response fact... 120 3e-29
CB893813 similar to GP|19352047|d auxin response factor 7b {Oryz... 100 2e-21
TC82150 similar to GP|19352051|dbj|BAB85919. auxin response fact... 92 8e-19
TC91214 similar to GP|2708484|gb|AAB92476.1| IAA24 {Arabidopsis ... 84 3e-16
>TC88450 similar to PIR|F86427|F86427 auxin response factor 6 (ARF6)
[imported] - Arabidopsis thaliana, partial (17%)
Length = 1422
Score = 708 bits (1827), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Frame = +3
Query: 486 NNNQENQNLSQSQPQAQTNPQQHPQHQHSFNNQLHHHSQQQQQTQQQVVDNNQQISGSVS 545
NNNQENQNLSQSQPQAQTNPQQHPQHQHSFNNQLHHHSQQQQQTQQQVVDNNQQISGSVS
Sbjct: 3 NNNQENQNLSQSQPQAQTNPQQHPQHQHSFNNQLHHHSQQQQQTQQQVVDNNQQISGSVS 182
Query: 546 TMSQFVSATQPQSPPPMQALSSLCHQQSFSDSNVNSSTTIVSPLHSIMGSSFPHDESSLL 605
TMSQFVSATQPQSPPPMQALSSLCHQQSFSDSNVNSSTTIVSPLHSIMGSSFPHDESSLL
Sbjct: 183 TMSQFVSATQPQSPPPMQALSSLCHQQSFSDSNVNSSTTIVSPLHSIMGSSFPHDESSLL 362
Query: 606 MSLPRTSSWVPVQNSTGWPSKRIAVDPLLSSGASQCILPQVEQLGQARNSMSQNAITLPP 665
MSLPRTSSWVPVQNSTGWPSKRIAVDPLLSSGASQCILPQVEQLGQARNSMSQNAITLPP
Sbjct: 363 MSLPRTSSWVPVQNSTGWPSKRIAVDPLLSSGASQCILPQVEQLGQARNSMSQNAITLPP 542
Query: 666 FPGRECSIDQEGSNDPQSNLLFGVNIDPSSLLLHNGMSNFKGISGNNNDSSTMSYHQSSS 725
FPGRECSIDQEGSNDPQSNLLFGVNIDPSSLLLHNGMSNFKGISGNNNDSSTMSYHQSSS
Sbjct: 543 FPGRECSIDQEGSNDPQSNLLFGVNIDPSSLLLHNGMSNFKGISGNNNDSSTMSYHQSSS 722
Query: 726 YMNTAGADSSLNHGVTPSIGESGFLHTQENGEQGNNPLNKTFVKVYKSGSFGRSLDITKF 785
YMNTAGADSSLNHGVTPSIGESGFLHTQENGEQGNNPLNKTFVKVYKSGSFGRSLDITKF
Sbjct: 723 YMNTAGADSSLNHGVTPSIGESGFLHTQENGEQGNNPLNKTFVKVYKSGSFGRSLDITKF 902
Query: 786 SSYNELRSELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWP 833
SSYNELRSELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWP
Sbjct: 903 SSYNELRSELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWP 1046
Score = 38.5 bits (88), Expect = 0.011
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 834 LLKDVTANSLHFFMESVI 851
LLKDVTANSLHFFMESVI
Sbjct: 1238 LLKDVTANSLHFFMESVI 1291
>TC79570 similar to PIR|F86427|F86427 auxin response factor 6 (ARF6)
[imported] - Arabidopsis thaliana, partial (15%)
Length = 1143
Score = 483 bits (1242), Expect(2) = e-141
Identities = 255/362 (70%), Positives = 288/362 (79%), Gaps = 21/362 (5%)
Frame = +2
Query: 329 WDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDDDFGMSSPL 388
WDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHG+KDDDFGM+SPL
Sbjct: 2 WDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGLKDDDFGMNSPL 181
Query: 389 MWLRDTDRGLQSLNYQGIGVNPWMQPRFDPAMLNMQTDMYQAVAAAALQDMRTVVDPSKQ 448
+WLRD DRGLQ+LN+QG+GVNPWMQ R DP+M+NMQ DMYQA+AAAALQDMRT +DPSKQ
Sbjct: 182 LWLRDADRGLQTLNFQGMGVNPWMQARLDPSMMNMQPDMYQAMAAAALQDMRT-LDPSKQ 358
Query: 449 LPGSLLQFQQPPNFPNRTAALMQAQMLQQSQPQQAFQNNNQENQNLSQSQPQAQTNPQQH 508
P SLLQFQQP NF N AALMQ QMLQQSQP QAF NQE+Q+ SQSQ Q Q QQ
Sbjct: 359 HPASLLQFQQPQNFSNGNAALMQNQMLQQSQPHQAFP-KNQESQHPSQSQAQTQ-QFQQL 532
Query: 509 PQHQHSFNNQLHHHSQQQQ---------------------QTQQQVVDNNQQISGSVSTM 547
QHQHSF NQ +H QQQQ Q QQQVVD +QQ+S +VSTM
Sbjct: 533 LQHQHSFTNQNYHMQQQQQQQQQQQQQQQQQHQQQQQQQSQQQQQVVD-HQQMSNAVSTM 709
Query: 548 SQFVSATQPQSPPPMQALSSLCHQQSFSDSNVNSSTTIVSPLHSIMGSSFPHDESSLLMS 607
SQFVSA QS PMQA+SS+ HQQ+FSDSN N VSPLH+++G SF +DE+S L++
Sbjct: 710 SQFVSAPPSQSTQPMQAISSIGHQQNFSDSNGNP----VSPLHNMLG-SFSNDETSHLLN 874
Query: 608 LPRTSSWVPVQNSTGWPSKRIAVDPLLSSGASQCILPQVEQLGQARNSMSQNAITLPPFP 667
PR +SWVPVQ+ST PSKR+AVDPLLSSGAS +LPQVEQLGQ++ +MSQNAITLPPFP
Sbjct: 875 FPRPNSWVPVQSSTARPSKRVAVDPLLSSGASHYVLPQVEQLGQSQTTMSQNAITLPPFP 1054
Query: 668 GR 669
GR
Sbjct: 1055GR 1060
Score = 37.7 bits (86), Expect(2) = e-141
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +3
Query: 670 ECSIDQEGSNDPQSNLLFGVNIDPSSLLL 698
EC+I EG+ DPQ++LLFG NI+PSS L+
Sbjct: 1062 ECAI--EGNTDPQNHLLFGFNIEPSSHLV 1142
>TC88775 homologue to PIR|F86427|F86427 auxin response factor 6 (ARF6)
[imported] - Arabidopsis thaliana, partial (23%)
Length = 678
Score = 451 bits (1159), Expect = e-127
Identities = 219/222 (98%), Positives = 221/222 (98%)
Frame = +3
Query: 112 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRH 171
+ TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRH
Sbjct: 9 EATNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRH 188
Query: 172 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLS 231
IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLS
Sbjct: 189 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLS 368
Query: 232 SDSMHLGLLAAAAHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRML 291
SDSMHLGLLAAAAHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRML
Sbjct: 369 SDSMHLGLLAAAAHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRML 548
Query: 292 FETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDEST 333
FETEESSVRRYMGTITGICDL+SVRWPNSHWRSVKVGWDEST
Sbjct: 549 FETEESSVRRYMGTITGICDLNSVRWPNSHWRSVKVGWDEST 674
>TC92002 similar to GP|4104929|gb|AAD02218.1| auxin response factor 7
{Arabidopsis thaliana}, partial (31%)
Length = 1138
Score = 290 bits (741), Expect(2) = e-126
Identities = 140/193 (72%), Positives = 167/193 (85%), Gaps = 1/193 (0%)
Frame = +3
Query: 55 IPNYPSLPPQLICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTP-SKQP 113
IP+YP+LP +LIC LHN+ +HAD ETDEVYAQMTLQP+N + KEA L +++G ++QP
Sbjct: 9 IPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYD-KEAMLASDMGLKQNQQP 185
Query: 114 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIF 173
+ +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQE++A+DL+ W FRHI+
Sbjct: 186 SEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLYDTTWTFRHIY 365
Query: 174 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSD 233
RGQPKRHLLTTGWSVFVS KRL AGDSVLFI +EK QLLLGI+R+SR Q + SSV+SSD
Sbjct: 366 RGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRSSRQQPALSSSVISSD 545
Query: 234 SMHLGLLAAAAHA 246
SMH+G+LAAAAHA
Sbjct: 546 SMHIGILAAAAHA 584
Score = 181 bits (458), Expect(2) = e-126
Identities = 99/179 (55%), Positives = 122/179 (67%), Gaps = 4/179 (2%)
Frame = +1
Query: 238 GLLAAAAHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEES 297
G L A+ NS FTIFYNPR P EFVIPLAKY KA+Y T VS+GMRFRM+FETE+S
Sbjct: 559 GFLLLRLMLASNNSPFTIFYNPRTSPCEFVIPLAKYNKALY-THVSLGMRFRMMFETEDS 735
Query: 298 SVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYP 356
VRRYMGTITGI DLD VRW NS WR+++VGWDESTAGER RVS+W+IEP+ T F + P
Sbjct: 736 GVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICP 915
Query: 357 SPFPLRLKRPWPPGLPSFHGMKDDDFGMSSPLMWLRDTDRGLQSLN---YQGIGVNPWM 412
PF R K P PG+P ++ F + P WL D + G++ + + G+ + WM
Sbjct: 916 PPF-FRPKFPKQPGMPEDESEIENAFKRAMP--WLGD-ELGMKDTSSSVFPGLSLVQWM 1080
>TC91430 similar to PIR|F86427|F86427 auxin response factor 6 (ARF6)
[imported] - Arabidopsis thaliana, partial (23%)
Length = 728
Score = 392 bits (1008), Expect = e-109
Identities = 189/204 (92%), Positives = 196/204 (95%)
Frame = +3
Query: 5 GEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQ 64
GEKRVLDSELWHACAGPLV LPA GSRVVYFPQGHSEQVAVSTN+EVD +IPN PSLPPQ
Sbjct: 105 GEKRVLDSELWHACAGPLVCLPADGSRVVYFPQGHSEQVAVSTNREVDTYIPN-PSLPPQ 281
Query: 65 LICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPSKQPTNYFCKTLTAS 124
LICQLHNLTMHAD ETDEVYAQMTLQPLN +EQKEAYLPAELGT +KQPTNYFCK LTAS
Sbjct: 282 LICQLHNLTMHADTETDEVYAQMTLQPLNPEEQKEAYLPAELGTANKQPTNYFCKILTAS 461
Query: 125 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTT 184
DTSTHGGFSVPRRAAEKVFPPLDF+QQPPAQELIARDLHGN+WKF+HIFRGQPKRHLLTT
Sbjct: 462 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHGNDWKFKHIFRGQPKRHLLTT 641
Query: 185 GWSVFVSAKRLVAGDSVLFIWNEK 208
GWSVFVSAKRLVAGDSVLFIWNEK
Sbjct: 642 GWSVFVSAKRLVAGDSVLFIWNEK 713
>TC85977 similar to GP|10176918|dbj|BAB10162. auxin response factor-like
protein {Arabidopsis thaliana}, partial (65%)
Length = 3162
Score = 231 bits (590), Expect(2) = e-100
Identities = 110/185 (59%), Positives = 140/185 (75%)
Frame = +3
Query: 13 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNL 72
ELWHACAGPLV++P G V YFPQGH EQV STN+ + H+P Y L P+++C++ N+
Sbjct: 306 ELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVY-DLRPKILCRVINV 482
Query: 73 TMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGF 132
+ A+ +TDEV+AQ+TL P Q++ A P + + FCKTLTASDTSTHGGF
Sbjct: 483 MLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGF 662
Query: 133 SVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSA 192
SV +R A++ PPLD S+QPP QEL+A+DLHGNEW+FRHIFRGQP+RHLL +GWSVFVS+
Sbjct: 663 SVLKRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSS 842
Query: 193 KRLVA 197
KRLVA
Sbjct: 843 KRLVA 857
Score = 153 bits (387), Expect(2) = e-100
Identities = 81/164 (49%), Positives = 110/164 (66%), Gaps = 1/164 (0%)
Frame = +2
Query: 211 LLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRACPSEFVIPL 270
L +G+RRA R Q +PSSV+SS SMHLG+LA A HA T + FT++Y PR P+EF++P
Sbjct: 899 LRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPY 1078
Query: 271 AKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWD 330
+Y++++ + ++GMRF+M FE EE+ +R+ GTI GI D DS RWP S WR +KV WD
Sbjct: 1079 DQYMESLKNN-YTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWD 1255
Query: 331 ESTAGERQPRVSLWEIEPLTTFP-MYPSPFPLRLKRPWPPGLPS 373
E++ R RVS W+IEP P + P P P R KRP +PS
Sbjct: 1256 ETSNIPRPERVSPWKIEPALAPPALNPLPMP-RPKRPRANVVPS 1384
Score = 73.2 bits (178), Expect = 4e-13
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Frame = +2
Query: 686 LFGVNIDPSSLLLHNGMSNFKGISGNNNDSSTMSYHQSSSYMNTAGADSSLNHGVTPSIG 745
LFG ++ S +L +S N S T S+ Q SS +T D H +
Sbjct: 2003 LFGFSLLSSPTMLEPSLSQ------RNATSETSSHMQISSQHHTFENDQKSEHSKSSKPA 2164
Query: 746 ESGFL-------------HTQENGEQGNNPLNKTFVKVYKSG-SFGRSLDITKFSSYNEL 791
+ + H ++ + + ++ KV+K G + GRS+D+TKFS Y+EL
Sbjct: 2165 DKLVIVDEHEKQLQTSQPHVKDVQLKPQSGSARSCTKVHKKGIALGRSVDLTKFSDYDEL 2344
Query: 792 RSELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPW 832
+EL ++F GEL P + W +VF D E D++L+GD PW
Sbjct: 2345 TAELDQLFEFRGELISP-QKDWLVVFTDNEGDMMLVGDDPW 2464
>TC82637 similar to PIR|G86331|G86331 IAA24 [imported] - Arabidopsis
thaliana, partial (28%)
Length = 889
Score = 306 bits (784), Expect(2) = 4e-99
Identities = 146/208 (70%), Positives = 172/208 (82%), Gaps = 1/208 (0%)
Frame = +1
Query: 2 DFAGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSL 61
+ G ++ L+SELWHACAGPLVSLP VG V YFPQGHSEQVA ST + + IPNYPSL
Sbjct: 106 EHCGVRKTLNSELWHACAGPLVSLPQVGGLVYYFPQGHSEQVAASTRRIATSQIPNYPSL 285
Query: 62 PPQLICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELG-TPSKQPTNYFCKT 120
P QL+CQ+ N+T+HAD ETDE+YAQMTLQPLN++ KE + +E G + SK PT +FCKT
Sbjct: 286 PSQLLCQVQNVTLHADKETDEIYAQMTLQPLNSE--KEVFPVSEFGLSKSKHPTEFFCKT 459
Query: 121 LTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRH 180
LTASDTSTHGGFSVPRRAAEK+FPPLD++ QPP QEL+ RDLH N W FRHI+RGQPKRH
Sbjct: 460 LTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRH 639
Query: 181 LLTTGWSVFVSAKRLVAGDSVLFIWNEK 208
LLTTGWS+FV +KRL AGDSVLFI +E+
Sbjct: 640 LLTTGWSLFVGSKRLRAGDSVLFIRDEE 723
Score = 74.7 bits (182), Expect(2) = 4e-99
Identities = 36/54 (66%), Positives = 44/54 (80%)
Frame = +2
Query: 207 EKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPR 260
+K+QL +G+RRA+R QT +PSSVLS+DS G+LAAAAHAAA FTIFYNPR
Sbjct: 719 KKSQLRVGVRRANRQQTTLPSSVLSADSCTFGVLAAAAHAAANRKSFTIFYNPR 880
>TC88776 homologue to PIR|F86427|F86427 auxin response factor 6 (ARF6)
[imported] - Arabidopsis thaliana, partial (22%)
Length = 1278
Score = 218 bits (556), Expect(2) = 2e-89
Identities = 105/105 (100%), Positives = 105/105 (100%)
Frame = +3
Query: 5 GEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQ 64
GEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQ
Sbjct: 558 GEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQ 737
Query: 65 LICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTP 109
LICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTP
Sbjct: 738 LICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTP 872
Score = 130 bits (327), Expect(2) = 2e-89
Identities = 62/76 (81%), Positives = 66/76 (86%)
Frame = +1
Query: 111 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFR 170
KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKF+
Sbjct: 877 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFQ 1056
Query: 171 HIFRGQPKRHLLTTGW 186
+ +P + T W
Sbjct: 1057-TYLPRPAQKTSTYNW 1101
Score = 80.9 bits (198), Expect = 2e-15
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +2
Query: 169 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIW 205
FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIW
Sbjct: 1052 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIW 1162
>TC83162 homologue to PIR|F86427|F86427 auxin response factor 6 (ARF6)
[imported] - Arabidopsis thaliana, partial (18%)
Length = 569
Score = 268 bits (685), Expect(2) = 4e-77
Identities = 137/167 (82%), Positives = 149/167 (89%), Gaps = 1/167 (0%)
Frame = +2
Query: 181 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLL 240
LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMH+GLL
Sbjct: 62 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLL 241
Query: 241 AAAAHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGM-RFRMLFETEESSV 299
AAAAHAAATNS FT+F+NPRA PSEFVIPL+KY+KAVYHTR + + RFRMLFETEESSV
Sbjct: 242 AAAAHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRPFLSVCRFRMLFETEESSV 421
Query: 300 RRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEI 346
RRYMGTIT I D+D VRWPNSHWRSV+VG + G + VSLWE+
Sbjct: 422 RRYMGTITSISDMDPVRWPNSHWRSVRVGGMNHSWG-KTATVSLWEM 559
Score = 39.7 bits (91), Expect(2) = 4e-77
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 166 EWKFRHIFRGQPKRH 180
EWKFRHIFRGQPKRH
Sbjct: 16 EWKFRHIFRGQPKRH 60
>BG646172 homologue to PIR|F86427|F86 auxin response factor 6 (ARF6)
[imported] - Arabidopsis thaliana, partial (14%)
Length = 802
Score = 278 bits (712), Expect = 5e-75
Identities = 138/208 (66%), Positives = 156/208 (74%), Gaps = 1/208 (0%)
Frame = +1
Query: 293 ETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 352
ETEESSVRRYMGTITGI DLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF
Sbjct: 1 ETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 180
Query: 353 PMYPSPFPLRLKRPWPPGLPSFHGMKDDDFGMSSPLMWLRDTDRGLQSLNYQGIGVNPWM 412
PMYPSPFPLRLKRPWPPGLPSFHG+KDDDFGM+SPL+WLRD DRGLQ+LN+QG+GVNPWM
Sbjct: 181 PMYPSPFPLRLKRPWPPGLPSFHGLKDDDFGMNSPLLWLRDADRGLQTLNFQGMGVNPWM 360
Query: 413 QPRFDPAMLNMQTDMYQAVAAAALQDMRTVVDPSKQLPGSLLQFQQPPNFPNRTAALMQA 472
Q R DP+M+NMQ Q + Q + VVD QQ N + + + A
Sbjct: 361 QARLDPSMMNMQHQQQQQQQS---QQQQQVVD-----------HQQMSNAVSTMSQFVSA 498
Query: 473 QMLQQSQPQQAFQN-NNQENQNLSQSQP 499
Q +QP QA + +Q+N + S P
Sbjct: 499 PPSQSTQPMQAISSIGHQQNFSDSNGNP 582
Score = 157 bits (397), Expect = 2e-38
Identities = 87/150 (58%), Positives = 106/150 (70%)
Frame = +1
Query: 504 NPQQHPQHQHSFNNQLHHHSQQQQQTQQQVVDNNQQISGSVSTMSQFVSATQPQSPPPMQ 563
NP + S N H QQQQ QQQ V ++QQ+S +VSTMSQFVSA QS PMQ
Sbjct: 349 NPWMQARLDPSMMNMQHQQQQQQQSQQQQQVVDHQQMSNAVSTMSQFVSAPPSQSTQPMQ 528
Query: 564 ALSSLCHQQSFSDSNVNSSTTIVSPLHSIMGSSFPHDESSLLMSLPRTSSWVPVQNSTGW 623
A+SS+ HQQ+FSDSN N VSPLH+++G SF +DE+S L++ PR +SWVPVQ+ST
Sbjct: 529 AISSIGHQQNFSDSNGNP----VSPLHNMLG-SFSNDETSHLLNFPRPNSWVPVQSSTAR 693
Query: 624 PSKRIAVDPLLSSGASQCILPQVEQLGQAR 653
PSKR+AVDPLLSSGAS +LPQVE G R
Sbjct: 694 PSKRVAVDPLLSSGASHYVLPQVEH*GSHR 783
>TC79906 similar to PIR|F86427|F86427 auxin response factor 6 (ARF6)
[imported] - Arabidopsis thaliana, partial (12%)
Length = 896
Score = 176 bits (446), Expect(2) = 4e-45
Identities = 87/101 (86%), Positives = 92/101 (90%)
Frame = +1
Query: 733 DSSLNHGVTPSIGESGFLHTQENGEQGNNPLNKTFVKVYKSGSFGRSLDITKFSSYNELR 792
DSSLN G+T +GESGF+ T ENG QGN P NKTFVKVYKSGSFGRSLDITKFS+Y ELR
Sbjct: 88 DSSLNPGLTHGVGESGFMQTPENGGQGN-PQNKTFVKVYKSGSFGRSLDITKFSNYPELR 264
Query: 793 SELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWP 833
SELARMFGLEGELEDPVRSGWQLVFVD+ENDVLLLGDGPWP
Sbjct: 265 SELARMFGLEGELEDPVRSGWQLVFVDQENDVLLLGDGPWP 387
Score = 24.6 bits (52), Expect(2) = 4e-45
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 714 DSSTMSYHQSSSYMNTAGA 732
DSST + QSS+Y+NT GA
Sbjct: 33 DSSTAPF-QSSTYLNTTGA 86
>BQ124121 similar to PIR|G86331|G863 IAA24 [imported] - Arabidopsis thaliana,
partial (2%)
Length = 569
Score = 155 bits (393), Expect = 5e-38
Identities = 83/191 (43%), Positives = 117/191 (60%), Gaps = 2/191 (1%)
Frame = +2
Query: 139 AEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAG 198
A++ FP LD + QPP Q+L+ +DL G EW FRHI+ + HLLT GW+ FV++K L G
Sbjct: 5 ADRCFP*LDMTLQPPMQDLVVKDLQGIEWNFRHIYCDHERAHLLTNGWNTFVNSKNLRPG 184
Query: 199 DSVLFIWNEKNQLLLGIRRASRPQTVMPSSVL--SSDSMHLGLLAAAAHAAATNSRFTIF 256
DS +F+ E ++ +GIRRA + + + + + SS ++ LG LAA HA + S F +
Sbjct: 185 DSCIFVSGENGEIGIGIRRAMKQHSHICTKLCQQSSQNIQLGALAAVVHAVSIGSLFHLQ 364
Query: 257 YNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDSVR 316
Y+P P EF+IPL YV+++ S+G R ML E RRY GTI G D+D +R
Sbjct: 365 YHPWIAPFEFMIPLKTYVESI-EKDYSIGTRVHMLSEV-GGCPRRY-GTIVGNEDIDPIR 535
Query: 317 WPNSHWRSVKV 327
WP S WR +KV
Sbjct: 536 WPGSEWRCIKV 568
>TC89117 similar to GP|12484199|gb|AAG53998.1 auxin response transcription
factor 3 {Arabidopsis thaliana}, partial (26%)
Length = 861
Score = 154 bits (388), Expect = 2e-37
Identities = 82/169 (48%), Positives = 109/169 (63%), Gaps = 13/169 (7%)
Frame = +1
Query: 13 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYP----SLPPQLICQ 68
ELWHACAGPL+SLP GS VVY PQGH EQ AH ++P ++PP + C+
Sbjct: 370 ELWHACAGPLISLPKKGSIVVYVPQGHFEQ----------AH--DFPVSACNIPPHVFCR 513
Query: 69 LHNLTMHADVETDEVYAQMTLQPLNAQEQ---KEAYLPAELGTPSKQPT------NYFCK 119
+ ++ +HA+ +DEVY Q+ L P N Q + +E + A+ + + FCK
Sbjct: 514 VLDVKLHAEEGSDEVYCQVLLVPENQQLEQNVREGVIDADAEEEDTEAIVKSTTPHMFCK 693
Query: 120 TLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWK 168
TLTASDTSTHGGFSVPR AAE FPPLD+ QQ P+QEL+ +DLHG++W+
Sbjct: 694 TLTASDTSTHGGFSVPRXAAEDCFPPLDYGQQRPSQELVXKDLHGSKWE 840
>TC92362 similar to GP|19352047|dbj|BAB85917. auxin response factor 7b
{Oryza sativa}, partial (11%)
Length = 399
Score = 140 bits (354), Expect(2) = 3e-37
Identities = 66/88 (75%), Positives = 76/88 (86%)
Frame = +2
Query: 230 LSSDSMHLGLLAAAAHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFR 289
LSSDSMH+G+LAAAAHA+A NS FT+FYNPRA PSEFVIPLAKY +AVY ++S GMRFR
Sbjct: 128 LSSDSMHIGILAAAAHASANNSPFTVFYNPRASPSEFVIPLAKYYRAVYSHQISPGMRFR 307
Query: 290 MLFETEESSVRRYMGTITGICDLDSVRW 317
M+FETE+S RRYMGT G+ DLDSVRW
Sbjct: 308 MMFETEDSGTRRYMGTXIGVSDLDSVRW 391
Score = 33.5 bits (75), Expect(2) = 3e-37
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 206 NEKNQLLLGIRRASRPQTVMPSSVL 230
+EK QLLLGIRRA+R T + SSVL
Sbjct: 55 DEKQQLLLGIRRANRQPTNLSSSVL 129
>AW688064 homologue to GP|13272405|gb unknown protein {Arabidopsis thaliana},
partial (15%)
Length = 576
Score = 149 bits (375), Expect = 6e-36
Identities = 72/137 (52%), Positives = 97/137 (70%)
Frame = +1
Query: 84 YAQMTLQPLNAQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVF 143
++++TL PL E + + S++P + F KTLT SD + GGFSVPR AE +F
Sbjct: 1 FSKITLIPLRNSELENDDSDGDGSENSEKPAS-FAKTLTQSDANNGGGFSVPRYCAETIF 177
Query: 144 PPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 203
P LD+S +PP Q +IA+D+HG WKFRHI+RG P+RHLLTTGWS FV+ K+LVAGDS++F
Sbjct: 178 PRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVF 357
Query: 204 IWNEKNQLLLGIRRASR 220
+ E +L +GIRRA R
Sbjct: 358 LRAESGELFVGIRRAKR 408
>TC93578 similar to GP|9757747|dbj|BAB08228.1 auxin response factor 4
{Arabidopsis thaliana}, partial (18%)
Length = 634
Score = 86.3 bits (212), Expect(2) = 7e-33
Identities = 45/79 (56%), Positives = 54/79 (67%)
Frame = +1
Query: 13 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNL 72
ELWHACAGPL SLP G+ VVYFPQGH EQ A S + IPNY L PQ+ C++ N+
Sbjct: 184 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQFA-SFSPFKQLEIPNY-DLQPQIFCRVVNV 357
Query: 73 TMHADVETDEVYAQMTLQP 91
+ A+ E DEVY Q+TL P
Sbjct: 358 QLLANKENDEVYTQVTLLP 414
Score = 73.6 bits (179), Expect(2) = 7e-33
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +2
Query: 107 GTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPP 153
G+P+K + FCKTLT SDTSTHGGFSVPRRAAE FPPLD+ Q P
Sbjct: 491 GSPTKSTPHMFCKTLTVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRP 631
>TC91303 similar to GP|4104931|gb|AAD02219.1| auxin response factor 8
{Arabidopsis thaliana}, partial (12%)
Length = 828
Score = 120 bits (301), Expect(2) = 3e-29
Identities = 67/118 (56%), Positives = 82/118 (68%), Gaps = 1/118 (0%)
Frame = +3
Query: 716 STMSYHQSSSYMNTAGADSSLNHGVT-PSIGESGFLHTQENGEQGNNPLNKTFVKVYKSG 774
+T S H +S M G S ++ G P + +S L Q G+ FVKVYKSG
Sbjct: 90 TTASAHADASTMPLGG--SLVSRGSPYPCMQDSSEL-LQSAGQVDAQNQTPIFVKVYKSG 260
Query: 775 SFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPW 832
S GRSLDI++F+SY+ELR ELA+MFG+EG+ EDP+RSGWQLVFVDRENDVLLLGD PW
Sbjct: 261 SVGRSLDISRFNSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 434
Score = 26.9 bits (58), Expect(2) = 3e-29
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 678 SNDPQSNLLFGVNIDPSS 695
S+D Q+++LFGVNID S+
Sbjct: 7 SSDAQNSVLFGVNIDSSA 60
>CB893813 similar to GP|19352047|d auxin response factor 7b {Oryza sativa},
partial (10%)
Length = 787
Score = 100 bits (250), Expect = 2e-21
Identities = 50/96 (52%), Positives = 68/96 (70%), Gaps = 6/96 (6%)
Frame = +1
Query: 743 SIGESGFLHTQENGEQGNNPLN------KTFVKVYKSGSFGRSLDITKFSSYNELRSELA 796
+I +SGFL ++G P +T+ KVYK G+ GRS+DIT++S Y+EL+ +LA
Sbjct: 7 TINDSGFL---DSGPWAPRPPPHQFQRIRTYTKVYKRGAVGRSIDITRYSGYDELKHDLA 177
Query: 797 RMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPW 832
R FG+EG+LED R GW+LV+VD ENDVLL+GD PW
Sbjct: 178 RRFGIEGQLEDRQRVGWKLVYVDHENDVLLVGDDPW 285
>TC82150 similar to GP|19352051|dbj|BAB85919. auxin response factor 10
{Oryza sativa}, partial (30%)
Length = 1263
Score = 92.0 bits (227), Expect = 8e-19
Identities = 40/66 (60%), Positives = 53/66 (79%)
Frame = +1
Query: 155 QELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLG 214
Q +IA+D+HG WKF+HI+RG P+RHLLTTGWS FV+ K+LVAGDS++F+ E L +G
Sbjct: 1 QTIIAKDMHGQCWKFKHIYRGTPRRHLLTTGWSNFVNHKKLVAGDSIVFLRAENGDLCVG 180
Query: 215 IRRASR 220
IRRA +
Sbjct: 181 IRRAKK 198
Score = 81.6 bits (200), Expect = 1e-15
Identities = 78/291 (26%), Positives = 122/291 (41%), Gaps = 19/291 (6%)
Frame = +2
Query: 243 AAHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRR 301
A + A F Y PRA EF + ++ VK+ + GMRF+M FETE+SS +
Sbjct: 368 AVNGAVNGRSFEGVYYPRASTPEFCVKVSS-VKSAMQIQWCSGMRFKMPFETEDSSRISW 544
Query: 302 YMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYP-SPFP 360
+MGTI+ + D +RWP+S WR ++V WDE + V+ W +E ++ P + SPF
Sbjct: 545 FMGTISSVHVQDPIRWPDSPWRLLQVVWDEPDLLQNVKCVNPWLVELVSNMPNFNLSPFT 724
Query: 361 LRLKRPWPPGLPSFHGMKDDDFGMSSPLMWLRDTDRGLQSLNYQGIGVNPWMQPRFDPAM 420
K+P P FH M SSP + + LNY ++
Sbjct: 725 PPRKKPRFIQDPYFHLMNQS----SSPSI------SNINLLNYT------------KSSL 838
Query: 421 LNMQTDMYQAVAAAALQDMR-TVVDPSKQLPGSLLQFQQPPNFPNRTAALMQAQMLQQSQ 479
N+Q + A+++Q R P+ P L+ F + L ++ QQ
Sbjct: 839 CNIQDTTTNSSFASSIQGARHAQFGPNYNNPSDLIPFNKLLQQDMFLGNLSLSRFNQQQP 1018
Query: 480 -------PQQAFQNNNQENQNLSQS---------QPQAQTNPQQHPQHQHS 514
P ++ NNN N+ S Q ++N + H H+
Sbjct: 1019ITRPPYGPYKSINNNNNTKTNVDLSCLLSVGNSGQSFKESNIEAKAPHNHN 1171
>TC91214 similar to GP|2708484|gb|AAB92476.1| IAA24 {Arabidopsis thaliana},
partial (11%)
Length = 562
Score = 83.6 bits (205), Expect = 3e-16
Identities = 38/68 (55%), Positives = 50/68 (72%)
Frame = +3
Query: 765 KTFVKVYKSGSFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGWQLVFVDRENDV 824
+T+ KV K+GS GRS+D+T F +Y EL + MFGL+G L D SGW+LV+VD E+DV
Sbjct: 147 RTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDV 326
Query: 825 LLLGDGPW 832
LL+GD PW
Sbjct: 327 LLVGDDPW 350
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.316 0.130 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,063,277
Number of Sequences: 36976
Number of extensions: 434247
Number of successful extensions: 4337
Number of sequences better than 10.0: 210
Number of HSP's better than 10.0 without gapping: 3693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4009
length of query: 851
length of database: 9,014,727
effective HSP length: 104
effective length of query: 747
effective length of database: 5,169,223
effective search space: 3861409581
effective search space used: 3861409581
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Medicago: description of AC127428.5