BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC127019.10 + phase: 0
(113 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77274 similar to GP|22136956|gb|AAM91707.1 unknown protein {Ar... 136 1e-33
TC89120 PIR|A26014|A26014 histone H3 - wheat, complete 136 1e-33
TC78424 PIR|A26014|A26014 histone H3 - wheat, complete 136 1e-33
TC86632 PIR|A26014|A26014 histone H3 - wheat, complete 136 1e-33
TC77273 PIR|A26014|A26014 histone H3 - wheat, complete 136 1e-33
TC87557 PIR|A26014|A26014 histone H3 - wheat, complete 136 1e-33
TC81197 PIR|A26014|A26014 histone H3 - wheat, complete 136 1e-33
TC81730 PIR|A26014|A26014 histone H3 - wheat, partial (94%) 132 3e-32
TC92301 PIR|A26014|A26014 histone H3 - wheat, complete 88 7e-32
TC84535 homologue to GP|11121216|emb|CAC14792. histone H3 {Morti... 130 1e-31
BI263077 GP|21702714|g histone H3 {Hypocrea jecorina}, complete 130 1e-31
TC85156 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycop... 129 2e-31
TC76927 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycop... 129 2e-31
TC76926 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycop... 129 2e-31
TC80359 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycop... 129 2e-31
TC85197 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycop... 129 2e-31
TC88838 homologue to GP|11121216|emb|CAC14792. histone H3 {Morti... 129 2e-31
AJ501216 homologue to GP|1435157|emb histone H3 variant H3.3 {Ly... 124 7e-30
TC83567 homologue to GP|11121216|emb|CAC14792. histone H3 {Morti... 122 3e-29
AW980465 PIR|A26014|A26 histone H3 - wheat, partial (98%) 112 2e-26
>TC77274 similar to GP|22136956|gb|AAM91707.1 unknown protein {Arabidopsis
thaliana}, partial (80%)
Length = 2013
Score = 136 bits (342), Expect = 1e-33
Identities = 78/116 (67%), Positives = 84/116 (72%), Gaps = 3/116 (2%)
Frame = +3
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 75 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 254
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAVSA+QE EA V LFEDTN+CAIHAK
Sbjct: 255 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 422
>TC89120 PIR|A26014|A26014 histone H3 - wheat, complete
Length = 652
Score = 136 bits (342), Expect = 1e-33
Identities = 78/116 (67%), Positives = 84/116 (72%), Gaps = 3/116 (2%)
Frame = +2
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 50 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 229
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAVSA+QE EA V LFEDTN+CAIHAK
Sbjct: 230 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 397
>TC78424 PIR|A26014|A26014 histone H3 - wheat, complete
Length = 652
Score = 136 bits (342), Expect = 1e-33
Identities = 78/116 (67%), Positives = 84/116 (72%), Gaps = 3/116 (2%)
Frame = +1
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 61 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 240
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAVSA+QE EA V LFEDTN+CAIHAK
Sbjct: 241 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 408
>TC86632 PIR|A26014|A26014 histone H3 - wheat, complete
Length = 640
Score = 136 bits (342), Expect = 1e-33
Identities = 78/116 (67%), Positives = 84/116 (72%), Gaps = 3/116 (2%)
Frame = +3
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 84 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 263
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAVSA+QE EA V LFEDTN+CAIHAK
Sbjct: 264 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 431
>TC77273 PIR|A26014|A26014 histone H3 - wheat, complete
Length = 697
Score = 136 bits (342), Expect = 1e-33
Identities = 78/116 (67%), Positives = 84/116 (72%), Gaps = 3/116 (2%)
Frame = +2
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 71 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 250
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAVSA+QE EA V LFEDTN+CAIHAK
Sbjct: 251 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 418
>TC87557 PIR|A26014|A26014 histone H3 - wheat, complete
Length = 621
Score = 136 bits (342), Expect = 1e-33
Identities = 78/116 (67%), Positives = 84/116 (72%), Gaps = 3/116 (2%)
Frame = +2
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 71 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 250
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAVSA+QE EA V LFEDTN+CAIHAK
Sbjct: 251 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 418
>TC81197 PIR|A26014|A26014 histone H3 - wheat, complete
Length = 646
Score = 136 bits (342), Expect = 1e-33
Identities = 78/116 (67%), Positives = 84/116 (72%), Gaps = 3/116 (2%)
Frame = +1
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 67 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 246
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAVSA+QE EA V LFEDTN+CAIHAK
Sbjct: 247 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 414
>TC81730 PIR|A26014|A26014 histone H3 - wheat, partial (94%)
Length = 571
Score = 132 bits (331), Expect = 3e-32
Identities = 72/112 (64%), Positives = 81/112 (72%), Gaps = 2/112 (1%)
Frame = +2
Query: 4 TKQTARNTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS--NK 61
+KQ+ ++TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST +
Sbjct: 47 SKQSRKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIR 226
Query: 62 EASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
+ FKT LRFQSSAVSA+QE EA V LFEDTN+CAIHAK
Sbjct: 227 KLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 382
>TC92301 PIR|A26014|A26014 histone H3 - wheat, complete
Length = 557
Score = 88.2 bits (217), Expect(2) = 7e-32
Identities = 48/59 (81%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRST 58
MA TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 13 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKST 189
Score = 63.5 bits (153), Expect(2) = 7e-32
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = +3
Query: 59 SNKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
S+K+ S FKT LRFQSSAVSA+QE EA V LFEDTN+CAIHAK
Sbjct: 195 SDKKTSFQRLVREIAQDFKTYLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 359
>TC84535 homologue to GP|11121216|emb|CAC14792. histone H3 {Mortierella
alpina}, partial (98%)
Length = 654
Score = 130 bits (326), Expect = 1e-31
Identities = 74/116 (63%), Positives = 84/116 (71%), Gaps = 3/116 (2%)
Frame = +2
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
+A TKQTAR +TGGKAPRKQLATKAARKSA AAG VKKPH + GTVALREIR YQ+ST
Sbjct: 38 VARTKQTARKSTGGKAPRKQLATKAARKSAPAAGGVKKPHRYRPGTVALREIRRYQKSTE 217
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSA+ A+QE EA V+LFEDTN+ AIHAK
Sbjct: 218 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAAEAYLVALFEDTNLAAIHAK 385
>BI263077 GP|21702714|g histone H3 {Hypocrea jecorina}, complete
Length = 682
Score = 130 bits (326), Expect = 1e-31
Identities = 73/116 (62%), Positives = 85/116 (72%), Gaps = 3/116 (2%)
Frame = +2
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLA+KAARKSA + G VKKPH + GTVALREIR YQ+ST
Sbjct: 92 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTE 271
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FK+ LRFQSSA+ A+QE VE+ VSLFEDTN+CAIHAK
Sbjct: 272 LLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAK 439
>TC85156 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycopersicon
esculentum}, complete
Length = 754
Score = 129 bits (324), Expect = 2e-31
Identities = 74/116 (63%), Positives = 81/116 (69%), Gaps = 3/116 (2%)
Frame = +1
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLATKAARKSA G VKKPH + GTVALREIR YQ+ST
Sbjct: 61 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 240
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQS AV A+QE EA V LFEDTN+CAIHAK
Sbjct: 241 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAK 408
>TC76927 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycopersicon
esculentum}, complete
Length = 741
Score = 129 bits (324), Expect = 2e-31
Identities = 74/116 (63%), Positives = 81/116 (69%), Gaps = 3/116 (2%)
Frame = +2
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLATKAARKSA G VKKPH + GTVALREIR YQ+ST
Sbjct: 104 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 283
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQS AV A+QE EA V LFEDTN+CAIHAK
Sbjct: 284 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAK 451
>TC76926 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycopersicon
esculentum}, complete
Length = 695
Score = 129 bits (324), Expect = 2e-31
Identities = 74/116 (63%), Positives = 81/116 (69%), Gaps = 3/116 (2%)
Frame = +2
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLATKAARKSA G VKKPH + GTVALREIR YQ+ST
Sbjct: 68 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 247
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQS AV A+QE EA V LFEDTN+CAIHAK
Sbjct: 248 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAK 415
>TC80359 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycopersicon
esculentum}, complete
Length = 1440
Score = 129 bits (324), Expect = 2e-31
Identities = 74/116 (63%), Positives = 81/116 (69%), Gaps = 3/116 (2%)
Frame = +2
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLATKAARKSA G VKKPH + GTVALREIR YQ+ST
Sbjct: 53 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTD 232
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQS AV A+QE EA V LFEDTN+CAIHAK
Sbjct: 233 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAK 400
>TC85197 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycopersicon
esculentum}, complete
Length = 1332
Score = 129 bits (324), Expect = 2e-31
Identities = 74/116 (63%), Positives = 81/116 (69%), Gaps = 3/116 (2%)
Frame = +2
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLATKAARKSA G VKKPH + GTVALREIR YQ+ST
Sbjct: 566 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 745
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQS AV A+QE EA V LFEDTN+CAIHAK
Sbjct: 746 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAK 913
>TC88838 homologue to GP|11121216|emb|CAC14792. histone H3 {Mortierella
alpina}, complete
Length = 730
Score = 129 bits (323), Expect = 2e-31
Identities = 73/116 (62%), Positives = 83/116 (70%), Gaps = 3/116 (2%)
Frame = +3
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH + GTVALREIR YQ++T
Sbjct: 108 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKTTD 287
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSA+ A+QE EA V+LFEDTN+ AIHAK
Sbjct: 288 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAAEAYLVALFEDTNLAAIHAK 455
>AJ501216 homologue to GP|1435157|emb histone H3 variant H3.3 {Lycopersicon
esculentum}, partial (96%)
Length = 450
Score = 124 bits (310), Expect = 7e-30
Identities = 71/116 (61%), Positives = 79/116 (67%), Gaps = 3/116 (2%)
Frame = +1
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +T GKAPRKQLATKAARKS G +KKPH + GTVALREIR YQ+ T
Sbjct: 58 MARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTE 237
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQS AV A+QE VEA V LFEDTN+CAIHAK
Sbjct: 238 LLIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAK 405
>TC83567 homologue to GP|11121216|emb|CAC14792. histone H3 {Mortierella
alpina}, partial (81%)
Length = 454
Score = 122 bits (305), Expect = 3e-29
Identities = 70/110 (63%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
Frame = +3
Query: 1 MAGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
MA TKQTAR +TGGKAPRKQLATKAARKSA AAG VKKPH + GTVALREIR YQ+ST
Sbjct: 120 MARTKQTARKSTGGKAPRKQLATKAARKSAPAAGGVKKPHRYRPGTVALREIRRYQKSTE 299
Query: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNI 107
++ FKT LRFQSSA+ A+QE EA V+LFEDTN+
Sbjct: 300 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAAEAYLVALFEDTNL 449
>AW980465 PIR|A26014|A26 histone H3 - wheat, partial (98%)
Length = 607
Score = 112 bits (281), Expect = 2e-26
Identities = 64/102 (62%), Positives = 70/102 (67%), Gaps = 2/102 (1%)
Frame = +2
Query: 14 KAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS--NKEASVSETCEG 71
K+ KQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST ++
Sbjct: 71 KSRGKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVRE 250
Query: 72 NCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
FKT LRFQSSAVSA+QE EA V LFEDTN+CAIHAK
Sbjct: 251 IAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 376
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.315 0.125 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,637,215
Number of Sequences: 36976
Number of extensions: 45369
Number of successful extensions: 277
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of query: 113
length of database: 9,014,727
effective HSP length: 89
effective length of query: 24
effective length of database: 5,723,863
effective search space: 137372712
effective search space used: 137372712
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)
Medicago: description of AC127019.10