BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126787.10 - phase: 0
(306 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC93366 similar to PIR|E96745|E96745 hypothetical protein T9N14.... 121 3e-28
TC77204 similar to GP|21536625|gb|AAM60957.1 RING-H2 zinc finger... 120 9e-28
TC90876 weakly similar to GP|19347753|gb|AAL86301.1 putative RIN... 117 4e-27
TC77205 similar to GP|19347753|gb|AAL86301.1 putative RING-H2 zi... 117 6e-27
BF646214 similar to GP|8843779|dbj| gene_id:MZN1.3~unknown prote... 92 3e-19
AJ501352 similar to PIR|B84584|B845 probable RING zinc finger pr... 89 2e-18
TC79350 similar to PIR|T08944|T08944 hypothetical protein F25O24... 87 8e-18
TC88172 similar to GP|12003386|gb|AAG43550.1 Avr9/Cf-9 rapidly e... 81 4e-16
TC88616 weakly similar to PIR|T48209|T48209 hypothetical protein... 81 6e-16
AW329822 similar to PIR|T00428|T004 hypothetical protein At2g475... 79 2e-15
TC76690 similar to GP|21593806|gb|AAM65773.1 putative RING zinc ... 79 2e-15
BF645370 weakly similar to GP|12321864|gb| RING zinc finger prot... 78 4e-15
BG452562 similar to GP|9293902|dbj contains similarity to RING z... 75 4e-14
TC91319 similar to GP|15529216|gb|AAK97702.1 At1g72220/T9N14_22 ... 71 6e-13
TC78603 weakly similar to GP|19698827|gb|AAL91149.1 unknown prot... 71 6e-13
TC78547 similar to GP|12003386|gb|AAG43550.1 Avr9/Cf-9 rapidly e... 70 1e-12
TC81401 weakly similar to GP|21593762|gb|AAM65729.1 unknown {Ara... 67 7e-12
TC81289 weakly similar to PIR|G96791|G96791 probable RING zinc f... 67 7e-12
TC92850 similar to GP|15529216|gb|AAK97702.1 At1g72220/T9N14_22 ... 67 9e-12
TC89671 weakly similar to GP|9759560|dbj|BAB11162.1 C3HC4-type R... 67 9e-12
>TC93366 similar to PIR|E96745|E96745 hypothetical protein T9N14.11
[imported] - Arabidopsis thaliana, partial (27%)
Length = 1082
Score = 121 bits (304), Expect = 3e-28
Identities = 82/267 (30%), Positives = 130/267 (47%), Gaps = 8/267 (2%)
Frame = +2
Query: 2 SSSEPKYDTPPAPTYKTPPALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQ---- 57
S+++ PP P + F ++ I+ + V + GF + Q
Sbjct: 218 STAQIPNSLPPPPPPPDKITTLKFDKSMAIVLIILIGV-----FLILGFLSVYTRQCAEQ 382
Query: 58 --RTTSGSLVRLSPDRSPSRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDD 115
R + ++ RGL+ ++E FPTF+YS+VK L+ ++ +LECA+CL EF D
Sbjct: 383 RMRGRFDLSIPIAGSHRRHRGLETEIIETFPTFVYSTVKGLKIGRA-ALECAVCLNEFQD 559
Query: 116 DSMLRLLTICCHVFHQECIDLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNV 175
D LRL+ C HVFH +C+D WL +H TCPVCR +L P S +++ ++ +
Sbjct: 560 DETLRLIPNCSHVFHSQCVDAWLVNHSTCPVCRANLIPRPGDTSFASIQILDSSLSDSDD 739
Query: 176 QEGMTSLPCDDIHIDVRGEESDNVGEIT--RAQVHEGDQHDHHVGMSMQQQEDHRFSRSH 233
++ + I + R +T RA+ +G + F+RSH
Sbjct: 740 PTRISPIRGPGIAVTSRSPSPKVNYSVTPNRARPVRSSSTGFKIGNWVP------FARSH 901
Query: 234 STGHSIVTIRGEEKDHEKYTLRLPEHV 260
STGHS+V E ++HE++TLRLPE V
Sbjct: 902 STGHSLVQ---EGENHERFTLRLPEEV 973
>TC77204 similar to GP|21536625|gb|AAM60957.1 RING-H2 zinc finger
protein-like {Arabidopsis thaliana}, partial (30%)
Length = 1218
Score = 120 bits (300), Expect = 9e-28
Identities = 88/262 (33%), Positives = 122/262 (45%), Gaps = 3/262 (1%)
Frame = +3
Query: 2 SSSEPKYDTPPAPTYK---TPPALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQR 58
+ S+ D P P + P + + V L + F +Y+ + C L
Sbjct: 108 TQSQATNDNPTNPNFNQEFNPSFAIIIVILVAALFLMGFFSIYI-RRCSDSPSSNNLLLP 284
Query: 59 TTSGSLVRLSPDRSPSRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSM 118
T+G R+ +RGLD +++E FP YS VK + K LECA+CL+EF+D
Sbjct: 285 ITNGR-------RAVARGLDPSVIETFPILEYSEVK-IHKIGKDVLECAVCLMEFEDTET 440
Query: 119 LRLLTICCHVFHQECIDLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQEG 178
LRL+ C HVFH ECID WL SH TCPVCR +L P S HG + ++ Q
Sbjct: 441 LRLIPKCDHVFHPECIDEWLSSHTTCPVCRANLVPQPGD-SVHGV--PESQQQDVEAQND 611
Query: 179 MTSLPCDDIHIDVRGEESDNVGEITRAQVHEGDQHDHHVGMSMQQQEDHRFSRSHSTGHS 238
LP ESD+V + + + + Q RF RSHSTGHS
Sbjct: 612 AVQLP----------TESDSV-LLAPEVISLNKTLNRNRTRGSQSNRPRRFPRSHSTGHS 758
Query: 239 IVTIRGEEKDHEKYTLRLPEHV 260
++ GE D ++TL+LP V
Sbjct: 759 LIQ-PGENTD--RFTLKLPNKV 815
>TC90876 weakly similar to GP|19347753|gb|AAL86301.1 putative RING-H2 zinc
finger protein ATL6 {Arabidopsis thaliana}, partial
(24%)
Length = 1338
Score = 117 bits (294), Expect = 4e-27
Identities = 71/191 (37%), Positives = 107/191 (55%)
Frame = +1
Query: 72 SPSRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQ 131
S S+G++ LL FP YS++KD++ +K LECA+CL +F + LRLL C HVFH
Sbjct: 475 SCSQGINKELLNTFPILFYSTIKDVKTDKG-PLECAVCLTDFKEQDTLRLLPKCNHVFHP 651
Query: 132 ECIDLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQEGMTSLPCDDIHIDV 191
+CID WL SH TCPVCR +L+ Q++ N NN +E ++P ++ +
Sbjct: 652 QCIDSWLASHVTCPVCRANLNQDSCQVAMTIPTNFNNEQ---TCEENSETVPEITLN-NT 819
Query: 192 RGEESDNVGEITRAQVHEGDQHDHHVGMSMQQQEDHRFSRSHSTGHSIVTIRGEEKDHEK 251
+++ N +I + ++G+ +H G + RS+STGHS+V + K E+
Sbjct: 820 TNDQNQNPNQID-SDANKGESINHDDG----HPSKLKLLRSNSTGHSLVE---QVKCVER 975
Query: 252 YTLRLPEHVIR 262
YTL LPE V R
Sbjct: 976 YTLMLPEDVRR 1008
>TC77205 similar to GP|19347753|gb|AAL86301.1 putative RING-H2 zinc finger
protein ATL6 {Arabidopsis thaliana}, partial (38%)
Length = 1317
Score = 117 bits (293), Expect = 6e-27
Identities = 80/231 (34%), Positives = 111/231 (47%), Gaps = 9/231 (3%)
Frame = +3
Query: 39 VVYVCKYCFAGFFHTWALQ---------RTTSGSLVRLSPDRSPSRGLDNTLLEKFPTFL 89
V+ V GFF + + R +G L S R +RGLD +++ FP F
Sbjct: 171 VILVAALFLMGFFSIYIRRCGDSPSNSIRNMAGGLAGRS--RRAARGLDASVIATFPIFE 344
Query: 90 YSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECIDLWLESHKTCPVCRT 149
YS+VK + K +LECA+CL EF++ LRL+ C HVFH ECID WL SH TCPVCR
Sbjct: 345 YSTVK-IHKIGKGALECAVCLNEFEESETLRLIPKCDHVFHPECIDEWLGSHTTCPVCRA 521
Query: 150 DLDSPPNQMSKHGEGNHNNNNNNLNVQEGMTSLPCDDIHIDVRGEESDNVGEITRAQVHE 209
+L P + S HG + N ++ Q + +H + S V +
Sbjct: 522 NLVPQPGE-SVHGIPSINTEPQDIEAQNDAV----ESVHEHQNADGSVKVDPTEPEVLTV 686
Query: 210 GDQHDHHVGMSMQQQEDHRFSRSHSTGHSIVTIRGEEKDHEKYTLRLPEHV 260
+ + Q F RSHSTGHS+V ++ E++TLRLP V
Sbjct: 687 SQTLNRNRTRGSQSGRPRWFQRSHSTGHSLVQ---PGENTERFTLRLPVEV 830
>BF646214 similar to GP|8843779|dbj| gene_id:MZN1.3~unknown protein
{Arabidopsis thaliana}, partial (27%)
Length = 638
Score = 91.7 bits (226), Expect = 3e-19
Identities = 44/120 (36%), Positives = 66/120 (54%)
Frame = +2
Query: 51 FHTWALQRTTSGSLVRLSPDRSPSRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICL 110
FHT+ ++ + S S ++GLD++++ P F+Y+ D + E + LEC ICL
Sbjct: 239 FHTFNIEDSPLSS--------SHTKGLDSSIISSIPMFIYAEKNDCKDEIEHELECVICL 394
Query: 111 LEFDDDSMLRLLTICCHVFHQECIDLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNN 170
F+D M R L C H FH ECID+WL SH CP+CR + N S E N ++++
Sbjct: 395 SGFEDGEMGRCLPKCGHGFHLECIDMWLSSHSNCPICRASIVVFENDSSSVVENNGDDSS 574
>AJ501352 similar to PIR|B84584|B845 probable RING zinc finger protein
[imported] - Arabidopsis thaliana, partial (17%)
Length = 607
Score = 89.4 bits (220), Expect = 2e-18
Identities = 44/129 (34%), Positives = 70/129 (54%)
Frame = +3
Query: 20 PALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTSGSLVRLSPDRSPSRGLDN 79
P+ + + I+ F+ F ++ K+C H + + + RS + G++
Sbjct: 165 PSKGVVIIVLSIMFFLTFILLVYVKFCRVTPIHLLNPNSLNLQNNLGQTRSRSINSGVEQ 344
Query: 80 TLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECIDLWLE 139
++E P F +SS+K ++ LEC +CL +F+D+ +LRLL C H FH CID WLE
Sbjct: 345 KVIETLPFFKFSSLKGSKQ----GLECTVCLSKFEDEEILRLLPKCKHAFHMNCIDKWLE 512
Query: 140 SHKTCPVCR 148
SH TCP+CR
Sbjct: 513 SHSTCPLCR 539
>TC79350 similar to PIR|T08944|T08944 hypothetical protein F25O24.10 -
Arabidopsis thaliana, partial (32%)
Length = 1698
Score = 87.0 bits (214), Expect = 8e-18
Identities = 46/129 (35%), Positives = 68/129 (52%)
Frame = +3
Query: 20 PALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTSGSLVRLSPDRSPSRGLDN 79
P+LV + ++ + F ++ K C + + L L RS G+D
Sbjct: 234 PSLVVVIAILGLMFSLTFILLIFAKVCHRR--QLLPISDDPNNQLATLMRSRSRFSGIDK 407
Query: 80 TLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECIDLWLE 139
T +E P F +SS+K ++ LEC+ICL +F+D +LRLL C H FH +CID WLE
Sbjct: 408 TAIESLPFFKFSSLKGSKQ----GLECSICLSKFEDIEILRLLPKCKHAFHIDCIDHWLE 575
Query: 140 SHKTCPVCR 148
H +CP+CR
Sbjct: 576 KHSSCPICR 602
>TC88172 similar to GP|12003386|gb|AAG43550.1 Avr9/Cf-9 rapidly elicited
protein 132 {Nicotiana tabacum}, partial (26%)
Length = 1445
Score = 81.3 bits (199), Expect = 4e-16
Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Frame = +3
Query: 27 LTVLILCFVAFSVVYVCKYCFA-GFFHTWALQRTTSGSLVRLSP-DRSPSRGLDNTLLEK 84
+ ++IL F+ V ++ + FA GF+ T + + + + S R GLD ++L
Sbjct: 267 VVIIILLFMVI-VTFLFFHLFAKGFWWTQSRRSSDNNSQSRRRRRSGQEGGGLDPSVLNS 443
Query: 85 FPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECIDLWLESHKTC 144
P +++S KE + LEC++CL E + +R+L C H+FH +CID+W SH TC
Sbjct: 444 LPISIFNS-----KEDGFDLECSVCLSEVVEGEKVRVLPKCNHMFHIDCIDMWFHSHSTC 608
Query: 145 PVCRTDLDSPP 155
P+CRT L + P
Sbjct: 609 PLCRTTLAATP 641
>TC88616 weakly similar to PIR|T48209|T48209 hypothetical protein T20L15.150
- Arabidopsis thaliana, partial (27%)
Length = 1148
Score = 80.9 bits (198), Expect = 6e-16
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Frame = +2
Query: 76 GLDNTLLEKFPTFLYSSVKDLRKEKSYS---LECAICLLEFDDDSMLRLLTICCHVFHQE 132
G+D T++ PTFL+ K + K+ S +ECA+CL +D+ M+RLL C H FH
Sbjct: 407 GVDPTIIAALPTFLFKQ-KQQEENKNVSKNIVECAVCLSVVEDEEMMRLLPNCKHSFHVG 583
Query: 133 CIDLWLESHKTCPVCRTDLDSPPNQMSKHG 162
CID WL SH TCP CRT ++ P + G
Sbjct: 584 CIDKWLASHSTCPNCRTKVEPRPEAEPREG 673
Score = 30.0 bits (66), Expect = 1.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 126 CHVFHQECIDLWLESHKTCPVCRTDLDSP 154
CH F CID L S C VC SP
Sbjct: 247 CHSFFSTCIDFGLSSTPLCKVCSQTPSSP 333
>AW329822 similar to PIR|T00428|T004 hypothetical protein At2g47560
[imported] - Arabidopsis thaliana, partial (27%)
Length = 553
Score = 79.3 bits (194), Expect = 2e-15
Identities = 42/121 (34%), Positives = 57/121 (46%), Gaps = 12/121 (9%)
Frame = +1
Query: 74 SRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQEC 133
+RGLD T++ P F Y D + + ECA+CL EF+ R+L C H FH EC
Sbjct: 163 TRGLDATVIASLPLFFY----DAKNYPENAPECAVCLSEFESGETGRVLPKCKHSFHTEC 330
Query: 134 IDLWLESHKTCPVCRTDLD------------SPPNQMSKHGEGNHNNNNNNLNVQEGMTS 181
ID+W SH TCP+CR ++ P S G NN N + G +S
Sbjct: 331 IDMWFHSHDTCPLCRAPVEPMQNRPDVVINVCEPETGSSSGSTEDVNNENRAGKEVGSSS 510
Query: 182 L 182
+
Sbjct: 511 V 513
>TC76690 similar to GP|21593806|gb|AAM65773.1 putative RING zinc finger
protein {Arabidopsis thaliana}, partial (22%)
Length = 1303
Score = 79.3 bits (194), Expect = 2e-15
Identities = 42/121 (34%), Positives = 57/121 (46%), Gaps = 12/121 (9%)
Frame = +3
Query: 74 SRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQEC 133
+RGLD T++ P F Y D + + ECA+CL EF+ R+L C H FH EC
Sbjct: 297 TRGLDATVIASLPLFFY----DAKNYPENAPECAVCLSEFESGETGRVLPKCKHSFHTEC 464
Query: 134 IDLWLESHKTCPVCRTDLD------------SPPNQMSKHGEGNHNNNNNNLNVQEGMTS 181
ID+W SH TCP+CR ++ P S G NN N + G +S
Sbjct: 465 IDMWFHSHDTCPLCRAPVEPMQNRPDVVINVCEPETGSSSGSTEDVNNENRAGKEVGSSS 644
Query: 182 L 182
+
Sbjct: 645 V 647
>BF645370 weakly similar to GP|12321864|gb| RING zinc finger protein;
17145-17621 {Arabidopsis thaliana}, partial (48%)
Length = 654
Score = 78.2 bits (191), Expect = 4e-15
Identities = 45/135 (33%), Positives = 67/135 (49%)
Frame = +1
Query: 22 LVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTSGSLVRLSPDRSPSRGLDNTL 81
+V F++ +L++ F +VC+Y HT TT+ S +P P +GLD
Sbjct: 187 IVLFSIFLLVIVLF-FYTRWVCRY------HTHI---TTTYSASIHAPPAQPPQGLDPAA 336
Query: 82 LEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECIDLWLESH 141
++K P L+ + D EC ICL EF D L++L C H FH +C+D WL
Sbjct: 337 IKKLPIILHQAPTDPENGAWEETECCICLGEFRDGEKLKVLPGCEHYFHCDCVDKWLTHQ 516
Query: 142 KTCPVCRTDLDSPPN 156
+CP+CR L P+
Sbjct: 517 SSCPLCRGSLKVEPS 561
>BG452562 similar to GP|9293902|dbj contains similarity to RING zinc finger
protein~gene_id:MVE11.15 {Arabidopsis thaliana}, partial
(59%)
Length = 664
Score = 74.7 bits (182), Expect = 4e-14
Identities = 42/127 (33%), Positives = 62/127 (48%)
Frame = +2
Query: 22 LVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTSGSLVRLSPDRSPSRGLDNTL 81
++ L ++C +A + + C F+ AL +S S S + ++G+
Sbjct: 215 MILAVLLCALICSLALNSIIRCALRFSNV----ALNNGSSSSSSSNSSPQLANKGIKKKA 382
Query: 82 LEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECIDLWLESH 141
L+ FPT YS+ L + EC ICL EF +R+L C H FH CID WL+SH
Sbjct: 383 LKTFPTVSYSTELKL---PTLDTECVICLSEFTKGEKVRILPKCNHGFHVRCIDKWLKSH 553
Query: 142 KTCPVCR 148
+CP CR
Sbjct: 554 SSCPKCR 574
>TC91319 similar to GP|15529216|gb|AAK97702.1 At1g72220/T9N14_22
{Arabidopsis thaliana}, partial (22%)
Length = 1065
Score = 70.9 bits (172), Expect = 6e-13
Identities = 49/172 (28%), Positives = 74/172 (42%), Gaps = 24/172 (13%)
Frame = +3
Query: 8 YDTPPAPTYKTPPALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWAL----------- 56
Y+ PP P+ T T T LI+ F + +++ C+A + ++
Sbjct: 150 YNPPPTPSDHTKHK----TTTYLIISFSIVAAIFLVLCCYAFYVKFFSRRNRSRRRALLT 317
Query: 57 -QRTTSGSLVRLSPD------------RSPSRGLDNTLLEKFPTFLYSSVKDLRKEKSYS 103
Q+T G +V D R+P GL +++ Y + L
Sbjct: 318 RQQTEQGFVVGEEHDDGSVVDHPIWYIRTP--GLQQSIINAITVVKYKKDEGLIDGS--- 482
Query: 104 LECAICLLEFDDDSMLRLLTICCHVFHQECIDLWLESHKTCPVCRTDLDSPP 155
+C++CL EF++D LRLL C H FH CID WL SH CP+CR + P
Sbjct: 483 -DCSVCLSEFEEDENLRLLPKCNHAFHLPCIDTWLRSHINCPMCRAPIVVDP 635
>TC78603 weakly similar to GP|19698827|gb|AAL91149.1 unknown protein
{Arabidopsis thaliana}, partial (28%)
Length = 1559
Score = 70.9 bits (172), Expect = 6e-13
Identities = 45/141 (31%), Positives = 67/141 (46%), Gaps = 5/141 (3%)
Frame = +3
Query: 76 GLDNTLLEKFPTFLYSSVKDLRKEKSY--SLECAICLLEFDDDSMLRLLTICCHVFHQEC 133
GL ++++ F Y RK++ EC++CL EF ++ LR+L C H FH C
Sbjct: 459 GLQRSVIDSITVFKY------RKDEGLVDGTECSVCLGEFQEEESLRILPKCSHAFHIPC 620
Query: 134 IDLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQEGMTSLPCDDIHIDVRG 193
ID WL SHK CP+CR + + ++S ++ +N + D + RG
Sbjct: 621 IDTWLSSHKNCPLCRAPVINDAAEVSITVTDQLDSISNISGDTQNQGHTESSDNAVG-RG 797
Query: 194 EESDNVGE---ITRAQVHEGD 211
S NVGE I R +GD
Sbjct: 798 LGSHNVGEFDIIIRVDNDDGD 860
>TC78547 similar to GP|12003386|gb|AAG43550.1 Avr9/Cf-9 rapidly elicited
protein 132 {Nicotiana tabacum}, partial (41%)
Length = 1648
Score = 70.1 bits (170), Expect = 1e-12
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Frame = +2
Query: 76 GLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECID 135
GL+ +L+ P ++ + ++ LECA+CL + + RLL C H FH +CID
Sbjct: 551 GLEAKILKSLPVLVFKN-----EDFKDGLECAVCLCDVVEGEKTRLLPKCNHGFHLDCID 715
Query: 136 LWLESHKTCPVCRTDL---DSPPNQMSKHGEGNH---NNNNNNLNVQEGMTSLPCDDIHI 189
+W +SH TCP+CR + PN + +GE + ++ NL+ G+ S ++
Sbjct: 716 MWFQSHSTCPLCRNLVSVESCKPNSTTSNGEEMNVLVSSEGENLSHVNGLESSNF-PTNV 892
Query: 190 DVRGEESDNVGEITRAQVHEGDQH 213
V G V + EG H
Sbjct: 893 LVWGNSQRQVSSSFGVSLEEGSSH 964
>TC81401 weakly similar to GP|21593762|gb|AAM65729.1 unknown {Arabidopsis
thaliana}, partial (30%)
Length = 768
Score = 67.4 bits (163), Expect = 7e-12
Identities = 45/126 (35%), Positives = 55/126 (42%)
Frame = +2
Query: 27 LTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTSGSLVRLSPDRSPSRGLDNTLLEKFP 86
L L L + S ++V C +A R S S L P +GL LEK P
Sbjct: 98 LLALFLPCLGMSAIFVVYMCLL-----YATTRHRSDSNPPLKP--VTEKGLSPLDLEKLP 256
Query: 87 TFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECIDLWLESHKTCPV 146
K KE ECA+CL + D+ RLL C H FH +C D WL H CP+
Sbjct: 257 -------KITGKELLAPTECAVCLDDIVDEQPARLLPGCNHAFHLQCADTWLSKHPMCPL 415
Query: 147 CRTDLD 152
CR LD
Sbjct: 416 CRAKLD 433
>TC81289 weakly similar to PIR|G96791|G96791 probable RING zinc finger
protein 5217-5774 [imported] - Arabidopsis thaliana,
partial (25%)
Length = 616
Score = 67.4 bits (163), Expect = 7e-12
Identities = 44/144 (30%), Positives = 64/144 (43%), Gaps = 6/144 (4%)
Frame = +1
Query: 38 SVVYVCKYCFAGFFHTWALQRTTSGSLVRLSPDRSPS-----RGLDNTLLEKFPTFLYSS 92
S+ +V CF QRTT+ P R P+ ++ FPT Y
Sbjct: 97 SMYHVVAICFCNH------QRTTTNPT---QPPRQPATPSLEENTSTSVANLFPTHKYHK 249
Query: 93 V-KDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECIDLWLESHKTCPVCRTDL 151
KD CA+CL +F++ LR + C H FH CID+WL SH CPVCR+
Sbjct: 250 RNKDDAVPDGEGDTCAVCLGDFEEGEELRTMPECLHSFHVSCIDMWLHSHSNCPVCRSS- 426
Query: 152 DSPPNQMSKHGEGNHNNNNNNLNV 175
+P ++ + HN + + N+
Sbjct: 427 TAPSPVVNGQQQQQHNIDMPHTNM 498
>TC92850 similar to GP|15529216|gb|AAK97702.1 At1g72220/T9N14_22
{Arabidopsis thaliana}, partial (19%)
Length = 687
Score = 67.0 bits (162), Expect = 9e-12
Identities = 27/49 (55%), Positives = 32/49 (65%)
Frame = +3
Query: 105 ECAICLLEFDDDSMLRLLTICCHVFHQECIDLWLESHKTCPVCRTDLDS 153
EC++CL EF +D LRLL C H FH CID WL SH CP+CR + S
Sbjct: 480 ECSVCLNEFHEDETLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAGIVS 626
>TC89671 weakly similar to GP|9759560|dbj|BAB11162.1 C3HC4-type RING zinc
finger protein-like {Arabidopsis thaliana}, partial (46%)
Length = 1421
Score = 67.0 bits (162), Expect = 9e-12
Identities = 36/94 (38%), Positives = 50/94 (52%), Gaps = 2/94 (2%)
Frame = +3
Query: 57 QRTTSGSLVRLSPDRSPS--RGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFD 114
QRT++ + +S + PS GLD +EK+P L L K + C+ICL E+
Sbjct: 933 QRTSNLPTITISLEPLPSFAMGLDGATIEKYPKTLIGESGRLLKANDNT--CSICLSEYQ 1106
Query: 115 DDSMLRLLTICCHVFHQECIDLWLESHKTCPVCR 148
LR + C H FH CID WL+ + TCP+CR
Sbjct: 1107 PKETLRSIPECNHYFHAACIDEWLKMNGTCPICR 1208
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,904,240
Number of Sequences: 36976
Number of extensions: 229865
Number of successful extensions: 2474
Number of sequences better than 10.0: 201
Number of HSP's better than 10.0 without gapping: 1944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2309
length of query: 306
length of database: 9,014,727
effective HSP length: 96
effective length of query: 210
effective length of database: 5,465,031
effective search space: 1147656510
effective search space used: 1147656510
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC126787.10