BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126786.6 - phase: 0
(228 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC84391 similar to PIR|E86340|E86340 protein F2D10.32 [imported]... 403 e-125
TC89771 similar to GP|6143884|gb|AAF04431.1| unknown protein {Ar... 105 1e-23
TC78930 similar to GP|21535744|emb|CAD35362. FK506 binding prote... 46 1e-05
TC87132 similar to GP|13702824|gb|AAK38500.1 putative FK506-bind... 45 2e-05
TC77303 similar to SP|Q43207|FKB7_WHEAT 70 kDa peptidylprolyl is... 40 6e-04
TC80887 similar to GP|6686798|emb|CAB64721.1 FKBP like protein {... 38 0.003
TC89157 similar to PIR|T48588|T48588 hypothetical protein T22N19... 36 0.014
TC77302 similar to GP|1354207|gb|AAB82061.1| rof1 {Arabidopsis t... 35 0.024
TC77582 similar to SP|Q43207|FKB7_WHEAT 70 kDa peptidylprolyl is... 34 0.040
TC78598 similar to SP|Q43207|FKB7_WHEAT 70 kDa peptidylprolyl is... 33 0.090
TC77411 homologue to SP|Q41649|FKB2_VICFA FK506-binding protein ... 32 0.26
TC77304 similar to GP|10177347|dbj|BAB10690. peptidylprolyl isom... 29 1.3
BF640516 similar to GP|17065312|gb Unknown protein {Arabidopsis ... 29 1.7
TC82980 similar to GP|18086370|gb|AAL57645.1 At2g47390/T8I13.23 ... 28 2.9
TC88990 similar to PIR|T11751|T11751 transcription repressor ROM... 28 2.9
TC86841 similar to PIR|B86416|B86416 unknown protein 16040-1118... 28 2.9
BG646274 similar to GP|14517434|gb| AT4g01940/T7B11_20 {Arabidop... 27 4.9
TC87514 similar to PIR|T06293|T06293 3-hydroxyisobutyryl-coenzym... 27 4.9
TC85778 similar to GP|14517434|gb|AAK62607.1 AT4g01940/T7B11_20 ... 27 4.9
TC93489 homologue to PIR|T47848|T47848 hypothetical protein T8B1... 27 4.9
>TC84391 similar to PIR|E86340|E86340 protein F2D10.32 [imported] -
Arabidopsis thaliana, partial (66%)
Length = 766
Score = 403 bits (1035), Expect(2) = e-125
Identities = 201/201 (100%), Positives = 201/201 (100%)
Frame = +3
Query: 28 GGFSLRRRALPVVALSQSRRSTAILISSLPFTFVFLSPPPPAEARERRKKKNIPIDDYIT 87
GGFSLRRRALPVVALSQSRRSTAILISSLPFTFVFLSPPPPAEARERRKKKNIPIDDYIT
Sbjct: 90 GGFSLRRRALPVVALSQSRRSTAILISSLPFTFVFLSPPPPAEARERRKKKNIPIDDYIT 269
Query: 88 SPDGLKYYDFLEGKGPIAEKGSTVQVHFDCLYRGITAVSSRESKLLAGNRVIAQPYEFKV 147
SPDGLKYYDFLEGKGPIAEKGSTVQVHFDCLYRGITAVSSRESKLLAGNRVIAQPYEFKV
Sbjct: 270 SPDGLKYYDFLEGKGPIAEKGSTVQVHFDCLYRGITAVSSRESKLLAGNRVIAQPYEFKV 449
Query: 148 GAPPGKERKREFVDNPNGLFSAQAAPKPPQAMYTIVEGMRVGGKRTVIVPPEKGYGKKGM 207
GAPPGKERKREFVDNPNGLFSAQAAPKPPQAMYTIVEGMRVGGKRTVIVPPEKGYGKKGM
Sbjct: 450 GAPPGKERKREFVDNPNGLFSAQAAPKPPQAMYTIVEGMRVGGKRTVIVPPEKGYGKKGM 629
Query: 208 NEIPPGATFELNIELLQLAST 228
NEIPPGATFELNIELLQLAST
Sbjct: 630 NEIPPGATFELNIELLQLAST 692
Score = 63.2 bits (152), Expect(2) = e-125
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = +2
Query: 1 MTSSLYTCSCSSSSLTWLLKKRNVDHYGGFSL 32
MTSSLYTCSCSSSSLTWLLKKRNVDHY F L
Sbjct: 8 MTSSLYTCSCSSSSLTWLLKKRNVDHYRRFQL 103
>TC89771 similar to GP|6143884|gb|AAF04431.1| unknown protein {Arabidopsis
thaliana}, partial (65%)
Length = 1003
Score = 105 bits (263), Expect = 1e-23
Identities = 76/223 (34%), Positives = 104/223 (46%), Gaps = 4/223 (1%)
Frame = +3
Query: 7 TCSCSSSSLTWLLKKRNVDHYGGFSLRRRALPVVALSQSRRSTAILISSLPFTFVFLSPP 66
+CSCS SS + + +++S L++SL TF +
Sbjct: 237 SCSCSHSSS-----------------HKTVVEPISMSLQIEGRRALLTSLLTTFAGVYAC 365
Query: 67 PPAEA----RERRKKKNIPIDDYITSPDGLKYYDFLEGKGPIAEKGSTVQVHFDCLYRGI 122
AEA R + IP D+ T P+GLKYYD G G A KGS V +H+ +RGI
Sbjct: 366 DVAEAVSTSRRALRGAKIPESDFKTLPNGLKYYDLKVGDGAEAVKGSRVAIHYVAKWRGI 545
Query: 123 TAVSSRESKLLAGNRVIAQPYEFKVGAPPGKERKREFVDNPNGLFSAQAAPKPPQAMYTI 182
T ++SR+ + G PY F VG A + +
Sbjct: 546 TFMTSRQGMGVGGGT----PYGFDVGE--------------------SARGNVLKGLDVG 653
Query: 183 VEGMRVGGKRTVIVPPEKGYGKKGMNEIPPGATFELNIELLQL 225
VEGMRVGG+R +IVPPE YG +G+ EIPP AT E++IELL +
Sbjct: 654 VEGMRVGGQRLLIVPPELAYGSRGVQEIPPNATIEMDIELLAI 782
>TC78930 similar to GP|21535744|emb|CAD35362. FK506 binding protein 1
{Arabidopsis thaliana}, partial (58%)
Length = 842
Score = 46.2 bits (108), Expect = 1e-05
Identities = 43/146 (29%), Positives = 61/146 (41%), Gaps = 7/146 (4%)
Frame = +1
Query: 88 SPDGLKYYDFLEGKGPIAEKGSTVQVHFDCLYRGITAVSSRES-KLLAGNRVIAQPYEFK 146
+P GL Y D + G GP A KG ++ H+ V E+ K+ + +P F+
Sbjct: 268 APSGLSYCDKVVGYGPQAVKGQLIKAHY---------VGRLENGKVFDSSYNRGKPLTFR 420
Query: 147 VGAPPGKERKREFVDNPNGLFSAQAAPKPPQAMYTIVEGMRVGGKRTVIVPPEKGYGKKG 206
VG G+ K V G+ P M GGKRT+ +PPE GYG +G
Sbjct: 421 VGV--GEVIKGWDV----GILGDDGIPP-----------MLTGGKRTLKLPPEFGYGSRG 549
Query: 207 MN------EIPPGATFELNIELLQLA 226
IPP A ++E + A
Sbjct: 550 AGCKGGSCVIPPDAVLLFDVEFVSKA 627
>TC87132 similar to GP|13702824|gb|AAK38500.1 putative FK506-binding protein
{Oryza sativa}, partial (68%)
Length = 857
Score = 45.4 bits (106), Expect = 2e-05
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Frame = +2
Query: 71 ARERRKKKNIPIDDYITSPDGLKYYDFLEGKGPIAEKGSTVQVHFDCLYRGITAVSSRES 130
+++ +N+ + + P+G++YY+ G G + +G V +
Sbjct: 353 SQQESNTRNVEEEKEVILPNGIRYYELKIGGGDMPRRGDLVVIDI-------------MG 493
Query: 131 KLLAGNRVIAQPYEFKVGAPPGKERKREFVDNPNGLFSAQAAPKPPQAMYTIVEGMRVGG 190
K+ + V +E G ++ V + S + + + +++ M+ GG
Sbjct: 494 KVESTGEVFVNTFE-------GDKKALALV-----MGSRPYSKGVCEGIEYVIKSMKAGG 637
Query: 191 KRTVIVPPEKGYGKKGMN-----EIPPGATFELNIEL 222
KR VIVPPE G+ + G + EIPP AT E +++
Sbjct: 638 KRKVIVPPELGFRENGADLGSGVEIPPLATLEYVVQV 748
>TC77303 similar to SP|Q43207|FKB7_WHEAT 70 kDa peptidylprolyl isomerase (EC
5.2.1.8) (Peptidylprolyl cis-trans isomerase) (PPiase),
partial (50%)
Length = 995
Score = 40.4 bits (93), Expect = 6e-04
Identities = 20/44 (45%), Positives = 26/44 (58%), Gaps = 1/44 (2%)
Frame = +2
Query: 186 MRVGGKRTVIVPPEKGYGKKGM-NEIPPGATFELNIELLQLAST 228
MR G K +PPE YGK G+ IPP AT + ++ELL S+
Sbjct: 227 MRKGEKALFTIPPELAYGKSGLPPNIPPNATLQYDVELLSSTSS 358
Score = 32.0 bits (71), Expect = 0.20
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Frame = +2
Query: 178 AMYTIVEGMRVGGKRTVIVPPEKGYGKKGMNE------IPPGATFELNIELL 223
A+ V+ M+ G + V P+ G+G KG +PP AT ++N+EL+
Sbjct: 548 ALSKAVKTMKKGENVALTVKPQYGFGVKGKPAHGDEIAVPPNATLKINLELV 703
>TC80887 similar to GP|6686798|emb|CAB64721.1 FKBP like protein {Arabidopsis
thaliana}, partial (65%)
Length = 742
Score = 38.1 bits (87), Expect = 0.003
Identities = 39/145 (26%), Positives = 60/145 (40%), Gaps = 7/145 (4%)
Frame = +2
Query: 84 DYITSPDGLKYYDFLEGKGPIAEKGSTVQVHFDCLYR-GITAVSSRESKLLAGNRVIAQP 142
+Y+ S GL Y D++EG G A G + +H+ + GI SS + A+P
Sbjct: 350 NYVKS--GLGYCDYVEGFGDEAPLGELIDIHYTARFADGIVFDSSYKR---------AKP 496
Query: 143 YEFKVGAPPGKERKREFVDNPNGLFSAQAAPKPPQAMYTIVEGMRVGGKRTVIVPPEKGY 202
++G GK + G+ + P MR+GGKR + +PP Y
Sbjct: 497 LTMRIGV--GKVIR----GLDQGILGGEGVPP-----------MRIGGKRKLTIPPLLAY 625
Query: 203 GKK------GMNEIPPGATFELNIE 221
G + G IP AT +I+
Sbjct: 626 GPEPAGCFSGDCNIPGNATLLYDIK 700
>TC89157 similar to PIR|T48588|T48588 hypothetical protein T22N19.60 -
Arabidopsis thaliana, partial (42%)
Length = 597
Score = 35.8 bits (81), Expect = 0.014
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 77 KKNIPIDDYITSPDGLKYYDFLEGKGPIAEKGSTVQVHFD 116
K + DY+ + GL+Y D G GP +KG TV V +D
Sbjct: 317 KSKMKYPDYVETESGLQYKDLRPGNGPKPKKGETVVVDWD 436
>TC77302 similar to GP|1354207|gb|AAB82061.1| rof1 {Arabidopsis thaliana},
partial (56%)
Length = 1221
Score = 35.0 bits (79), Expect = 0.024
Identities = 17/46 (36%), Positives = 25/46 (53%), Gaps = 1/46 (2%)
Frame = +1
Query: 183 VEGMRVGGKRTVIVPPEKGYGKKGMNE-IPPGATFELNIELLQLAS 227
++ M+ G +PPE YG+ G IPP AT + ++ELL S
Sbjct: 487 IKTMKKGENALFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 624
>TC77582 similar to SP|Q43207|FKB7_WHEAT 70 kDa peptidylprolyl isomerase (EC
5.2.1.8) (Peptidylprolyl cis-trans isomerase) (PPiase),
partial (92%)
Length = 2130
Score = 34.3 bits (77), Expect = 0.040
Identities = 16/46 (34%), Positives = 25/46 (53%), Gaps = 1/46 (2%)
Frame = +1
Query: 183 VEGMRVGGKRTVIVPPEKGYGKKGM-NEIPPGATFELNIELLQLAS 227
++ M+ G +PPE YG+ G IPP AT + ++E+L S
Sbjct: 388 IKTMKKGENALFTIPPELAYGESGSPPTIPPNATLQFDVEMLSWTS 525
>TC78598 similar to SP|Q43207|FKB7_WHEAT 70 kDa peptidylprolyl isomerase (EC
5.2.1.8) (Peptidylprolyl cis-trans isomerase) (PPiase),
partial (92%)
Length = 2028
Score = 33.1 bits (74), Expect = 0.090
Identities = 16/46 (34%), Positives = 24/46 (51%), Gaps = 1/46 (2%)
Frame = +1
Query: 183 VEGMRVGGKRTVIVPPEKGYGKKGM-NEIPPGATFELNIELLQLAS 227
++ M+ G +PPE YG+ G IPP A + ++ELL S
Sbjct: 487 IKTMKKGENAIFTIPPELAYGESGSPPTIPPNAALQFDVELLSWTS 624
>TC77411 homologue to SP|Q41649|FKB2_VICFA FK506-binding protein 2 precursor
(EC 5.2.1.8) (Peptidyl-prolyl cis- trans isomerase)
(PPiase), partial (98%)
Length = 682
Score = 31.6 bits (70), Expect = 0.26
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 185 GMRVGGKRTVIVPPEKGYGKKGM-NEIPPGATFELNIELL 223
GM +G KR + +P + GYG++G IP GAT + EL+
Sbjct: 305 GMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELV 424
>TC77304 similar to GP|10177347|dbj|BAB10690. peptidylprolyl isomerase
{Arabidopsis thaliana}, partial (74%)
Length = 1627
Score = 29.3 bits (64), Expect = 1.3
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Frame = +2
Query: 183 VEGMRVGGKRTVIVPPEKGYGKKGMNE------IPPGATFELNIELL 223
V+ M+ G + V P+ G+G KG +PP AT + N+EL+
Sbjct: 359 VKTMKKGENVALTVKPQYGFGVKGKPAHGDEIAVPPNATLKNNLELV 499
Score = 24.3 bits (51), Expect(2) = 1.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 186 MRVGGKRTVIVPPEKGYGK 204
MR G K +PPE YGK
Sbjct: 46 MRKGEKALFTIPPELAYGK 102
Score = 23.1 bits (48), Expect(2) = 1.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 210 IPPGATFELNIELLQLAST 228
IPP AT + ++ELL S+
Sbjct: 122 IPPNATLQYDVELLSSTSS 178
>BF640516 similar to GP|17065312|gb Unknown protein {Arabidopsis thaliana},
partial (30%)
Length = 659
Score = 28.9 bits (63), Expect = 1.7
Identities = 17/49 (34%), Positives = 26/49 (52%), Gaps = 1/49 (2%)
Frame = +3
Query: 56 LPFTFVFLSPPPPAEARERRKKKNIPI-DDYITSPDGLKYYDFLEGKGP 103
LPF + P +A ++ KKNIP+ D + P+G+K +E GP
Sbjct: 288 LPFEPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPEGMKGVKKVEMPGP 434
>TC82980 similar to GP|18086370|gb|AAL57645.1 At2g47390/T8I13.23
{Arabidopsis thaliana}, partial (22%)
Length = 644
Score = 28.1 bits (61), Expect = 2.9
Identities = 22/70 (31%), Positives = 35/70 (49%), Gaps = 4/70 (5%)
Frame = -2
Query: 3 SSLYTCS-CSSSSLTWLLKKRNVDHYGGFSLR--RRALPVVALSQSRRSTAIL-ISSLPF 58
+S+++ S C S S ++ V Y SL R LPV ++SR T ++ LPF
Sbjct: 508 ASIFSLSNCKSPSS*SDIRATTVSKYFSLSLSQIRSLLPVFMSNRSRNGTFPSGVAPLPF 329
Query: 59 TFVFLSPPPP 68
+ ++L PP
Sbjct: 328 SMIYLPSSPP 299
>TC88990 similar to PIR|T11751|T11751 transcription repressor ROM1 - kidney
bean, partial (91%)
Length = 1528
Score = 28.1 bits (61), Expect = 2.9
Identities = 14/29 (48%), Positives = 18/29 (61%)
Frame = -2
Query: 10 CSSSSLTWLLKKRNVDHYGGFSLRRRALP 38
C+SS T L+ V H+GGFS RR +P
Sbjct: 951 CTSSRSTRLV----VSHFGGFSTSRRCIP 877
>TC86841 similar to PIR|B86416|B86416 unknown protein 16040-11188 [imported]
- Arabidopsis thaliana, partial (17%)
Length = 2361
Score = 28.1 bits (61), Expect = 2.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 190 GKRTVIVPPEKGYGKKGMNEIPPGA 214
G RT+ VPP Y +G N+ PGA
Sbjct: 1812 GSRTMSVPPSTYYSFQGQNQQQPGA 1886
>BG646274 similar to GP|14517434|gb| AT4g01940/T7B11_20 {Arabidopsis
thaliana}, partial (35%)
Length = 634
Score = 27.3 bits (59), Expect = 4.9
Identities = 18/47 (38%), Positives = 24/47 (50%), Gaps = 4/47 (8%)
Frame = -2
Query: 30 FSLRRRALP----VVALSQSRRSTAILISSLPFTFVFLSPPPPAEAR 72
FSLR R++P VV L Q + L + PF+ S PP+E R
Sbjct: 312 FSLRTRSIPIFMVVVELGQLSHAPCSLRETTPFSTDTTSTFPPSEMR 172
>TC87514 similar to PIR|T06293|T06293 3-hydroxyisobutyryl-coenzyme A
hydrolase homolog T9E8.100 - Arabidopsis thaliana,
partial (93%)
Length = 1262
Score = 27.3 bits (59), Expect = 4.9
Identities = 10/29 (34%), Positives = 16/29 (54%)
Frame = +2
Query: 8 CSCSSSSLTWLLKKRNVDHYGGFSLRRRA 36
CSC++ WL+ + + Y G RRR+
Sbjct: 518 CSCNARKWNWLVPRCRICSYSGSKSRRRS 604
>TC85778 similar to GP|14517434|gb|AAK62607.1 AT4g01940/T7B11_20
{Arabidopsis thaliana}, partial (50%)
Length = 555
Score = 27.3 bits (59), Expect = 4.9
Identities = 18/47 (38%), Positives = 24/47 (50%), Gaps = 4/47 (8%)
Frame = -3
Query: 30 FSLRRRALP----VVALSQSRRSTAILISSLPFTFVFLSPPPPAEAR 72
FSLR R++P VV L Q + L + PF+ S PP+E R
Sbjct: 400 FSLRTRSIPIFMVVVELGQLSHAPCSLRETTPFSTDTTSTFPPSEMR 260
>TC93489 homologue to PIR|T47848|T47848 hypothetical protein T8B10.30 -
Arabidopsis thaliana, partial (34%)
Length = 563
Score = 27.3 bits (59), Expect = 4.9
Identities = 9/17 (52%), Positives = 13/17 (75%)
Frame = +3
Query: 183 VEGMRVGGKRTVIVPPE 199
+ MR GGKR +I+PP+
Sbjct: 168 IRDMRAGGKRRIIIPPD 218
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,618,379
Number of Sequences: 36976
Number of extensions: 121136
Number of successful extensions: 992
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of query: 228
length of database: 9,014,727
effective HSP length: 93
effective length of query: 135
effective length of database: 5,575,959
effective search space: 752754465
effective search space used: 752754465
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Medicago: description of AC126786.6