
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126783.5 + phase: 0
(612 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC81381 similar to GP|10177135|dbj|BAB10425. gene_id:K2A18.28~pi... 180 1e-45
TC83314 similar to GP|10177135|dbj|BAB10425. gene_id:K2A18.28~pi... 108 5e-24
AW561066 similar to GP|10177135|db gene_id:K2A18.28~pir||T10240~... 100 1e-21
TC84338 weakly similar to GP|1495247|emb|CAA66220.1 orf 05 {Arab... 81 2e-21
TC87277 similar to PIR|T45588|T45588 arm repeat containing prote... 49 7e-06
BF646977 weakly similar to PIR|T06629|T06 hypothetical protein T... 47 2e-05
TC78014 similar to GP|17529090|gb|AAL38755.1 unknown protein {Ar... 43 4e-04
TC81640 similar to GP|15292863|gb|AAK92802.1 unknown protein {Ar... 41 0.001
TC79280 similar to GP|21592960|gb|AAM64910.1 unknown {Arabidopsi... 40 0.003
BG451409 similar to PIR|D86151|D86 hypothetical protein AAF76473... 39 0.004
TC76733 similar to PIR|T06468|T06468 pectinesterase (EC 3.1.1.11... 33 0.32
BG581770 similar to GP|7290497|gb CG11427-PA {Drosophila melanog... 33 0.42
TC88623 similar to PIR|C84609|C84609 hypothetical protein At2g22... 32 0.55
TC77447 similar to GP|16974501|gb|AAL31160.1 AT3g06720/F3E22_14 ... 32 0.71
BG581900 similar to PIR|T47846|T47 Arm repeat containing protein... 31 1.2
TC76732 homologue to PIR|T06468|T06468 pectinesterase (EC 3.1.1.... 30 2.1
AW584284 similar to PIR|T45588|T45 arm repeat containing protein... 30 2.1
TC81430 weakly similar to GP|18491179|gb|AAL69492.1 unknown prot... 30 2.1
TC90350 weakly similar to GP|22830929|dbj|BAC15794. hypothetical... 30 2.7
TC91792 homologue to GP|13752562|gb|AAK38727.1 importin alpha 2 ... 30 3.5
>TC81381 similar to GP|10177135|dbj|BAB10425.
gene_id:K2A18.28~pir||T10240~strong similarity to
unknown protein {Arabidopsis thaliana}, partial (34%)
Length = 965
Score = 180 bits (457), Expect = 1e-45
Identities = 108/249 (43%), Positives = 151/249 (60%), Gaps = 3/249 (1%)
Frame = +3
Query: 356 ENEDPAVKLQLKISCAEALWMLAAGSVSNSRKITETKGMLCLAKIVEKEQGELQRNCLMT 415
E ED K +K A+AL LA G+ + R ITE++ +LC A ++EK E++ N +
Sbjct: 3 ELEDAESKADMKAMAAKALRYLAKGNSAICRSITESRALLCFAILLEKGPEEVKYNSALA 182
Query: 416 IMEITAAAESNADLRRGAFKTNSPPAKAVVEQLLRILKEVDSPLMQIPAIKSIGSLARTF 475
+ EITA AE + +LRR AFK N+P KAVV+Q++ I+ + D L+ IP IK IGSLARTF
Sbjct: 183 LKEITAVAEKDPELRRSAFKPNTPACKAVVDQVIDIIDKEDKRLL-IPCIKVIGSLARTF 359
Query: 476 PARETRVIEPLVAQLSNRDINVADEAAVALTKFASPDNFLYVEHSKKIIEFDAVPAVMKL 535
A ETR+I PLV L R+ V+ EAA +L KFAS DN+L+++H K II F V +++L
Sbjct: 360 RATETRIIGPLVRLLDEREAEVSKEAADSLAKFASNDNYLHLDHCKAIISFGGVKPLVQL 539
Query: 536 LRSNEVNQMHHALTLLCYLALHAGSSESLEQARVLLALEGADRTILPQH---IRDLVSKA 592
+ E + AL LL Y+ALH SE L +A +L LE A + H I L+ ++
Sbjct: 540 VYLGEPPVQYSALVLLSYIALHVPDSEELAKAEILGVLEWASKQPNMAHDEAIEALLQES 719
Query: 593 IGHLNLYHA 601
L LY +
Sbjct: 720 KSRLELYQS 746
>TC83314 similar to GP|10177135|dbj|BAB10425.
gene_id:K2A18.28~pir||T10240~strong similarity to
unknown protein {Arabidopsis thaliana}, partial (26%)
Length = 956
Score = 108 bits (271), Expect = 5e-24
Identities = 67/158 (42%), Positives = 98/158 (61%), Gaps = 1/158 (0%)
Frame = +3
Query: 140 GGINLSLPPIASNDPILSWVWSFIASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEG 199
GG L LPPIA+N+PIL ++W IA + G + +A L SLA+ +DR K+I+EEG
Sbjct: 48 GGEYLGLPPIAANEPILCFIWEQIAMLFTGSQEVRSDAAASLVSLARGSDRYGKLIIEEG 227
Query: 200 GVPPLLKLLKEASSPAAQIAAATCLCYLANDLERIRVIVNEVGVPAV-VQVLADSPIRVQ 258
GV PLLKL+KE + Q AA + L D E + +++ VGV +V ++L + P++VQ
Sbjct: 228 GVGPLLKLIKEGKAD-GQENAARAIGLLGRDAESVEHMIH-VGVCSVFAKILKEGPMKVQ 401
Query: 259 TLAANLVARMAKHDPVAQEDFARENAIRPLVTLLSFDT 296
+ A V+ +A + P QE FA+ N IR LV L+F+T
Sbjct: 402 GVVAWAVSELAANYPKCQELFAQHNIIRLLVGHLAFET 515
>AW561066 similar to GP|10177135|db gene_id:K2A18.28~pir||T10240~strong
similarity to unknown protein {Arabidopsis thaliana},
partial (19%)
Length = 432
Score = 100 bits (250), Expect = 1e-21
Identities = 59/146 (40%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Frame = +3
Query: 10 LEEELSYPILVAERIRSATEE-TDSFKLECSEVWKHVERLLQMLRTLVRFAATAPPPLYE 68
+++ L+ PI +A+++ A EE + SFK EC ++ E+L +LR AA + LYE
Sbjct: 12 VKQLLAKPIQLADQVSKAAEEGSSSFKQECLDLKSKTEKLASLLRQ----AARSSSDLYE 179
Query: 69 RPVRRVAAEAAKNLERALTLIRKCKRRSILHRVVTIVTAADFRKVLVYLDASVGDMKWLL 128
RP RR+ + + LE+ALTL+ KCK ++ RV +IV +A FRK+ +L+ S+GD+ WLL
Sbjct: 180 RPTRRIIGDTEQVLEKALTLVLKCKVNGLMKRVFSIVPSAAFRKMSSHLENSIGDVSWLL 359
Query: 129 SILDVDGSGGGGGINLSLPPIASNDP 154
+ + G L LPPIASN+P
Sbjct: 360 RV--SAPAEEGSYECLGLPPIASNEP 431
>TC84338 weakly similar to GP|1495247|emb|CAA66220.1 orf 05 {Arabidopsis
thaliana}, partial (9%)
Length = 670
Score = 80.9 bits (198), Expect(3) = 2e-21
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Frame = +1
Query: 6 EAKRLEEELSYPILVAERIRSATEETDSFKLECSEVWKHVERLLQMLRTLVRFAATAPPP 65
E K LEEEL PIL+ E++ EE S K+EC E+ K VE L + LR +VR +
Sbjct: 217 EEKSLEEELLIPILMGEQVIKLAEEAKSSKVECRELAKKVEILCKNLRGVVRVVTGSHQS 396
Query: 66 LYERPVRRVAAEAAKNLERALTLIRKCKRR--SILHRVVT 103
L +RP+RR+ E +KNLE+ L L+R+CK + ++L V+T
Sbjct: 397 LNDRPIRRMVRELSKNLEKTLALVRRCKSQGVNVLRNVLT 516
Score = 32.7 bits (73), Expect(3) = 2e-21
Identities = 14/19 (73%), Positives = 16/19 (83%)
Frame = +3
Query: 141 GINLSLPPIASNDPILSWV 159
G NLS+ IASNDPIL+WV
Sbjct: 612 GTNLSISXIASNDPILAWV 668
Score = 26.9 bits (58), Expect(3) = 2e-21
Identities = 11/23 (47%), Positives = 16/23 (68%)
Frame = +2
Query: 106 TAADFRKVLVYLDASVGDMKWLL 128
+ DFRKV L++S GDM W++
Sbjct: 524 STGDFRKVWNLLESSNGDMMWVV 592
>TC87277 similar to PIR|T45588|T45588 arm repeat containing protein homolog
- Arabidopsis thaliana, partial (48%)
Length = 1393
Score = 48.5 bits (114), Expect = 7e-06
Identities = 47/161 (29%), Positives = 70/161 (43%)
Frame = +1
Query: 157 SWVWSFIASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAA 216
S + S I + G D+ A E+ LA+ N N+ I E G +P L+ LL S
Sbjct: 145 SKIESLIQKLTSGGPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSVPDS-RT 321
Query: 217 QIAAATCLCYLANDLERIRVIVNEVGVPAVVQVLADSPIRVQTLAANLVARMAKHDPVAQ 276
Q A T L L+ IV+ VP +V VL + + AA + ++ D +
Sbjct: 322 QEHAVTALLNLSIYESNKGSIVSSGAVPGIVHVLKRGSMEARENAAATLFSLSVIDE-NK 498
Query: 277 EDFARENAIRPLVTLLSFDTAVDEQTSIHSIFQVNKELGKK 317
AI PLVTLLS T ++ + ++F + G K
Sbjct: 499 VTIGSSGAISPLVTLLSEGTQRGKKDAATALFNLCIYQGNK 621
>BF646977 weakly similar to PIR|T06629|T06 hypothetical protein T20K18.60 -
Arabidopsis thaliana, partial (29%)
Length = 662
Score = 47.0 bits (110), Expect = 2e-05
Identities = 33/112 (29%), Positives = 56/112 (49%)
Frame = +1
Query: 181 LASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLANDLERIRVIVNE 240
L +LA N+RNK IV G VPPL++LLK S+ ++A A L L++ +I
Sbjct: 280 LLNLAVRNERNKVQIVTAGAVPPLVELLKMQSNGIRELATAAILT-LSSAAPNKPIIAAS 456
Query: 241 VGVPAVVQVLADSPIRVQTLAANLVARMAKHDPVAQEDFARENAIRPLVTLL 292
P +VQ+L ++ + + ++ + V + +A+ PL+ LL
Sbjct: 457 GAAPLLVQILKSGSVQGKVDTVTTLHNLS-YSTVNPIELXDASAVSPLINLL 609
Score = 43.5 bits (101), Expect = 2e-04
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Frame = +1
Query: 169 GQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLA 228
G LN KIEA E+ + + + + + + + G + PL+ +L +S+ A+ ++ L LA
Sbjct: 118 GNLNTKIEAAREIRRMVRKSSKTRSKLADSGVIQPLIFML-SSSNIEARESSLLALLNLA 294
Query: 229 NDLERIRV-IVNEVGVPAVVQVLADSPIRVQTLAANLVARMAKHDPVAQEDFARENAIRP 287
ER +V IV VP +V++L ++ LA + ++ P + A A
Sbjct: 295 VRNERNKVQIVTAGAVPPLVELLKMQSNGIRELATAAILTLSSAAP-NKPIIAASGAAPL 471
Query: 288 LVTLL---SFDTAVDEQTSIHSI 307
LV +L S VD T++H++
Sbjct: 472 LVQILKSGSVQGKVDTVTTLHNL 540
>TC78014 similar to GP|17529090|gb|AAL38755.1 unknown protein {Arabidopsis
thaliana}, partial (74%)
Length = 2305
Score = 42.7 bits (99), Expect = 4e-04
Identities = 40/141 (28%), Positives = 63/141 (44%)
Frame = +3
Query: 177 ATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLANDLERIRV 236
A EL LA+ N N+ I E G +P L+ LL ++ P Q A T L L+ +
Sbjct: 1332 AAGELRLLAKRNADNRVCIAEAGAIPLLVDLLS-STDPRTQEHADTALLNLSINESNKGT 1508
Query: 237 IVNEVGVPAVVQVLADSPIRVQTLAANLVARMAKHDPVAQEDFARENAIRPLVTLLSFDT 296
IVN +P +V VL + + + AA + ++ D + AI L+ LL T
Sbjct: 1509 IVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVLDE-NKVAIGAAGAIPALIKLLCEGT 1685
Query: 297 AVDEQTSIHSIFQVNKELGKK 317
++ + +IF + G K
Sbjct: 1686 PRGKKDAATAIFNLCIYQGNK 1748
>TC81640 similar to GP|15292863|gb|AAK92802.1 unknown protein {Arabidopsis
thaliana}, partial (40%)
Length = 810
Score = 41.2 bits (95), Expect = 0.001
Identities = 26/97 (26%), Positives = 45/97 (45%)
Frame = +2
Query: 169 GQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLA 228
G + + N LA D K+ IVEEGG+ L++ +++ S + A T L A
Sbjct: 341 GMMEKAMVVLNSLAGF----DEGKEAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCA 508
Query: 229 NDLERIRVIVNEVGVPAVVQVLADSPIRVQTLAANLV 265
+ ++V E G+P +V + + R + A L+
Sbjct: 509 ESVTNRGLLVREGGIPPLVALSQNGTPRAKHKAETLL 619
Score = 38.5 bits (88), Expect = 0.008
Identities = 22/67 (32%), Positives = 37/67 (54%)
Frame = +2
Query: 161 SFIASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAA 220
+ + +I+ G + K A L L ++ N+ ++V EGG+PPL+ L + +P A+ A
Sbjct: 431 ALVEAIEDGSVKGKEFAVLTLLQLCAESVTNRGLLVREGGIPPLV-ALSQNGTPRAKHKA 607
Query: 221 ATCLCYL 227
T L YL
Sbjct: 608 ETLLRYL 628
>TC79280 similar to GP|21592960|gb|AAM64910.1 unknown {Arabidopsis
thaliana}, partial (46%)
Length = 809
Score = 39.7 bits (91), Expect = 0.003
Identities = 37/144 (25%), Positives = 66/144 (45%)
Frame = +2
Query: 153 DPILSWVWSFIASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEAS 212
DP+ W ++ + K +A+ L +L + NK V+ G + L++L+ +
Sbjct: 29 DPVQFRYW*IF*EVE--EYXGKKDASTALYTLCSVKE-NKMRAVKAGIMKVLVELMADFE 199
Query: 213 SPAAQIAAATCLCYLANDLERIRVIVNEVGVPAVVQVLADSPIRVQTLAANLVARMAKHD 272
S +A L L + E +V E GVP +V+++ R + +AA ++ ++ +
Sbjct: 200 SNMVD-KSAYVLSVLVSVPEAKVALVEEGGVPVLVEIVEVGSQRQKEIAAVILLQICEDS 376
Query: 273 PVAQEDFARENAIRPLVTLLSFDT 296
+ ARE AI PLV L T
Sbjct: 377 VAVRSMVAREGAIPPLVALTQSGT 448
Score = 34.7 bits (78), Expect = 0.11
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +2
Query: 192 KKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLANDLERIRVIVNEVGVPAVVQVLA 251
K +VEEGGVP L+++++ S +IAA L + + ++ E +P +V +
Sbjct: 260 KVALVEEGGVPVLVEIVEVGSQRQKEIAAVILLQICEDSVAVRSMVAREGAIPPLVALTQ 439
Query: 252 DSPIRVQTLAANLV 265
R + A L+
Sbjct: 440 SGTNRAKQKAEKLI 481
>BG451409 similar to PIR|D86151|D86 hypothetical protein AAF76473.1
[imported] - Arabidopsis thaliana, partial (24%)
Length = 671
Score = 39.3 bits (90), Expect = 0.004
Identities = 28/113 (24%), Positives = 55/113 (47%), Gaps = 1/113 (0%)
Frame = +1
Query: 163 IASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAAT 222
++ ++ N +I A +A+LA + + N+K IVE GG+ LL LL+ + AA
Sbjct: 19 LSLLESDDANVRIHAVKVVANLAAE-EANQKRIVESGGLTSLLMLLRRYEDETVRRVAAG 195
Query: 223 CLCYLANDLERIRVIVNEVGVPAVVQVLADS-PIRVQTLAANLVARMAKHDPV 274
+ LA + +I+ E G+ + +D+ + + A +A + +D +
Sbjct: 196 AIANLAMNEANQELIMAEGGITLLSMAASDAEDPQTLRMVAGAIANLCGNDKI 354
>TC76733 similar to PIR|T06468|T06468 pectinesterase (EC 3.1.1.11) precursor
- garden pea, partial (98%)
Length = 2029
Score = 33.1 bits (74), Expect = 0.32
Identities = 31/148 (20%), Positives = 63/148 (41%), Gaps = 2/148 (1%)
Frame = +2
Query: 454 EVDSPLMQIPAIKSIGSLARTFPARETRVIEPLVAQLSNRDINVADEAAVALTKFASPDN 513
+ S L + + + +L T + V+ L+ + + N D A+V + SP
Sbjct: 227 DTKSCLAHVSEVSHVPTLVTT-KDQNLHVLLSLLTKSTTHIQNAMDTASVIKRRINSPRE 403
Query: 514 FLYVEHSKKIIEF--DAVPAVMKLLRSNEVNQMHHALTLLCYLALHAGSSESLEQARVLL 571
+ + +++++ + + M L N ++ A T L SS A L
Sbjct: 404 EIALSDCEQLMDLSMNRIWDTMLKLTKNNIDSQQDAHTWL--------SSVLTNHATCLD 559
Query: 572 ALEGADRTILPQHIRDLVSKAIGHLNLY 599
LEG+ R ++ ++DL+S+A L ++
Sbjct: 560 GLEGSSRVVMENDLQDLISRARSSLAVF 643
>BG581770 similar to GP|7290497|gb CG11427-PA {Drosophila melanogaster},
partial (19%)
Length = 769
Score = 32.7 bits (73), Expect = 0.42
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 467 SIGSLARTFPARETRVIEPLVAQLSNRDINVADEAAVALTKFA---SPDNFLYVEHSKKI 523
+IG A + + LV LSNRD V E+ V + K + D+F + K+
Sbjct: 3 AIGRCAGSIKEVTETCLSGLVHLLSNRDEYVVAESVVVIKKLLQTQAADHFEIISQMAKL 182
Query: 524 IEFDAVPA 531
++F AVPA
Sbjct: 183 LDFIAVPA 206
>TC88623 similar to PIR|C84609|C84609 hypothetical protein At2g22130
[imported] - Arabidopsis thaliana, partial (24%)
Length = 1960
Score = 32.3 bits (72), Expect = 0.55
Identities = 40/153 (26%), Positives = 69/153 (44%), Gaps = 1/153 (0%)
Frame = +3
Query: 422 AAESNADLRRGAFKTNSPPAKAVVEQLLRILKEVDSPLMQIPAIKSIGSLARTFPARETR 481
AAE + L P V+ L+RIL PL+Q A+K++ S+A T+P +
Sbjct: 108 AAELLSHLLLEEHLQKDPVTPKVIAPLIRILGS-GIPLLQQRALKALVSIALTWPNEIAK 284
Query: 482 VIEPLVAQLSNRDINVADEAAVALTKFASPDNFLYVEHSKKIIEFDAVPAVMKLLRSNEV 541
E V ++S + AL + A+ ++ S + V +++LLRS
Sbjct: 285 --EGGVVEISRVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSE 458
Query: 542 NQMHHALTLLCYLALHAG-SSESLEQARVLLAL 573
+ + AL L L G S+E++ ++ + AL
Sbjct: 459 STVIGALNALLVLESDDGTSAEAMAESGAIEAL 557
>TC77447 similar to GP|16974501|gb|AAL31160.1 AT3g06720/F3E22_14
{Arabidopsis thaliana}, partial (96%)
Length = 2271
Score = 32.0 bits (71), Expect = 0.71
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 16/154 (10%)
Frame = +2
Query: 401 VEKEQGELQRNCLMTIMEITAAAESNADLRRGAFKTNSPPAKAVVEQLLRILKEV----- 455
V+ E+G +R + + ES RR + PA L + L+ +
Sbjct: 167 VDAEEGRRRREDNLVEIRKNRREESLQKKRREGLQPQQMPASVQSNLLEKKLEHLPALVT 346
Query: 456 ----DSPLMQIPA---IKSIGSLARTFPARET---RVIEPLVAQLSNRDI-NVADEAAVA 504
D MQ A + + S+ R+ P E V+ + L D + EAA A
Sbjct: 347 GIWTDDNNMQFEATTQFRKLLSIERSPPIEEVIQAGVVPRFIEFLMREDFPQLQFEAAWA 526
Query: 505 LTKFASPDNFLYVEHSKKIIEFDAVPAVMKLLRS 538
LT AS + E++K +IE AVP +KLL S
Sbjct: 527 LTNIASGTS----ENTKVVIEAGAVPIFVKLLAS 616
>BG581900 similar to PIR|T47846|T47 Arm repeat containing protein-like -
Arabidopsis thaliana, partial (24%)
Length = 774
Score = 31.2 bits (69), Expect = 1.2
Identities = 17/40 (42%), Positives = 22/40 (54%)
Frame = +1
Query: 188 NDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYL 227
N N IVEEGGV L++L + S A+ AA L Y+
Sbjct: 421 NPGNALRIVEEGGVAALVELCSSSVSKMARFMAALALAYM 540
Score = 30.8 bits (68), Expect = 1.6
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = +1
Query: 176 EATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAA--QIAAATCLCYLANDLER 233
EA L +L+ D DRN++ I GGV L+ L + S+ +A Q AA L L+
Sbjct: 133 EAAGALWNLSFD-DRNREAIAAAGGVQALVTLAQSCSNASAGLQERAAGALWGLSVSEAN 309
Query: 234 IRVIVNEVGVPAVVQVLADSPIRVQTLAANLVARMAKHDPVAQEDFARENAIRPLVTLLS 293
I E GV ++ + V AA + +A +P E + LV L S
Sbjct: 310 SIAIGREGGVAPLIALARSEAEDVHETAAGALWNLA-FNPGNALRIVEEGGVAALVELCS 486
>TC76732 homologue to PIR|T06468|T06468 pectinesterase (EC 3.1.1.11)
precursor - garden pea, complete
Length = 1860
Score = 30.4 bits (67), Expect = 2.1
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +2
Query: 499 DEAAVALTKFASPDNFLYVEHSKKIIEF--DAVPAVMKLLRSNEVNQMHHALTLLCYLAL 556
D A V + SP + + +++++ D V + L N ++ H A T L
Sbjct: 344 DTANVIKRRVNSPREEIALNDCEELMDLSMDRVWDSVLTLTKNNIDSQHDAHTWL----- 508
Query: 557 HAGSSESLEQARVLLALEGADRTILPQHIRDLVSKA 592
SS A L LEG+ R ++ + DL+S+A
Sbjct: 509 ---SSVLTNHATCLDGLEGSSRVVMESDLHDLISRA 607
>AW584284 similar to PIR|T45588|T45 arm repeat containing protein homolog -
Arabidopsis thaliana, partial (24%)
Length = 542
Score = 30.4 bits (67), Expect = 2.1
Identities = 33/117 (28%), Positives = 52/117 (44%)
Frame = +2
Query: 194 IIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLANDLERIRVIVNEVGVPAVVQVLADS 253
++ E G VP L+ LL S + A T L L+ IV+ VP + VL
Sbjct: 185 LLPEAGAVPLLVGLLSAPYSRTLE-HAVTALLNLSIYESIKGSIVSSGAVPRIGHVLNRG 361
Query: 254 PIRVQTLAANLVARMAKHDPVAQEDFARENAIRPLVTLLSFDTAVDEQTSIHSIFQV 310
+ + AA+ + ++ D + AI PLVTLLS T E+ + ++F +
Sbjct: 362 SVEARDNAASALFSLSLIDE-NKVTIGS*GAISPLVTLLSEGTQRGEKDAATALFNL 529
>TC81430 weakly similar to GP|18491179|gb|AAL69492.1 unknown protein
{Arabidopsis thaliana}, partial (49%)
Length = 1491
Score = 30.4 bits (67), Expect = 2.1
Identities = 23/63 (36%), Positives = 33/63 (51%)
Frame = +2
Query: 181 LASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLANDLERIRVIVNE 240
L LAQD N+ I GG+ PLLKLL ++ + + Q AA L LA + + + +
Sbjct: 134 LGRLAQDT-HNQAGIAHNGGLVPLLKLL-DSKNGSLQHNAAFALYGLAENEDNVSYFIRV 307
Query: 241 VGV 243
GV
Sbjct: 308 GGV 316
Score = 29.3 bits (64), Expect = 4.6
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 189 DRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLAN 229
D ++I +E G+ L+ LL +SS Q+ A LC LAN
Sbjct: 500 DDQRRIFIEHHGLELLISLLSSSSSKQ-QLDGAVALCKLAN 619
>TC90350 weakly similar to GP|22830929|dbj|BAC15794. hypothetical
protein~similar to Arabidopsis thaliana chromosome 1
T6L1.12, partial (32%)
Length = 984
Score = 30.0 bits (66), Expect = 2.7
Identities = 20/65 (30%), Positives = 32/65 (48%), Gaps = 1/65 (1%)
Frame = +2
Query: 172 NDKIE-ATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLAND 230
N+ IE AT + +D+ +++ + GV PLL L SSP + AA L L+ +
Sbjct: 449 NNLIENATGVINRFTNSSDKKLQLVSVQHGVIPLLVKLLSTSSPITKSRAANSLAQLSQN 628
Query: 231 LERIR 235
+R
Sbjct: 629 SLSLR 643
>TC91792 homologue to GP|13752562|gb|AAK38727.1 importin alpha 2 {Capsicum
annuum}, partial (34%)
Length = 655
Score = 29.6 bits (65), Expect = 3.5
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +2
Query: 470 SLARTFPARE---TRVIEPLVAQLSNRDI-NVADEAAVALTKFASPDNFLYVEHSKKIIE 525
S+ R+ P E + V+ V L D + EAA ALT AS + E++K +I+
Sbjct: 395 SIERSPPIEEVIQSGVVPRFVQLLVREDFPQLQSEAAWALTNIASGTS----ENTKVVID 562
Query: 526 FDAVPAVMKLLRS 538
AVP +KLL S
Sbjct: 563 HGAVPIFVKLLXS 601
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.132 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,113,329
Number of Sequences: 36976
Number of extensions: 194626
Number of successful extensions: 1015
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of query: 612
length of database: 9,014,727
effective HSP length: 102
effective length of query: 510
effective length of database: 5,243,175
effective search space: 2674019250
effective search space used: 2674019250
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Medicago: description of AC126783.5