Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC126782.15 + phase: 0 
         (1155 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC87958 weakly similar to GP|20279447|gb|AAM18727.1 putative TNP...   249  3e-66
BG452205 weakly similar to GP|1345502|emb TNP2 {Antirrhinum maju...   133  5e-31
BF650639 weakly similar to GP|22748425|g putative transposon pro...   129  8e-30
AI974280 weakly similar to GP|20279447|g putative TNP2-like tran...   123  4e-28
AW257182 weakly similar to GP|20279447|g putative TNP2-like tran...   100  6e-21
BG586318 similar to GP|6069576|dbj| transposon-like ORF {Brassic...    83  5e-16
TC82803 similar to PIR|D85049|D85049 probable transposon protein...    57  5e-11
BF636730                                                               62  2e-09
BQ752332 weakly similar to GP|8778366|gb| F15O4.30 {Arabidopsis ...    59  8e-09
BF631908 weakly similar to GP|21450441|gb| putative transposon p...    55  1e-07
TC90382 similar to GP|20161447|dbj|BAB90371. hypothetical protei...    35  0.17
TC88705 similar to GP|10177834|dbj|BAB11263. gene_id:MCD7.9~unkn...    33  0.83
TC82397 similar to GP|18377877|gb|AAL67124.1 AT3g53630/F4P12_330...    32  1.4
TC89319 similar to PIR|T02350|T02350 hypothetical protein T8F5.5...    32  1.8
TC80296 similar to PIR|H86265|H86265 protein F3F19.18 [imported]...    32  1.8
BQ155246                                                               32  1.8
TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-inf...    32  1.8
TC77438 homologue to PIR|T06807|T06807 nucleosome assembly prote...    31  2.4
TC92189 weakly similar to GP|21536818|gb|AAM61150.1 F-box protei...    31  2.4
TC77921 similar to GP|21553837|gb|AAM62930.1 phytochelatin synth...    31  3.1

>TC87958 weakly similar to GP|20279447|gb|AAM18727.1 putative TNP2-like
            transposon protein {Oryza sativa (japonica
            cultivar-group)}, partial (10%)
          Length = 2433

 Score =  249 bits (637), Expect = 3e-66
 Identities = 186/593 (31%), Positives = 293/593 (49%), Gaps = 25/593 (4%)
 Frame = +1

Query: 561  DLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYCKRKDLELK 620
            +LPYW  N L HNLDVMHIEKN+FDNI  T++D+ GKTKD+ + R DL+    RK+L  +
Sbjct: 1    ELPYWASNTLHHNLDVMHIEKNIFDNIIGTLLDIPGKTKDHVRGRYDLEEMGIRKNLHPR 180

Query: 621  PQPNGKLLKPKANYNLSAQEAKLVCQWLKDLRMPDGYSSNIGRCADVNTGRLHGMKSHDS 680
                G++    + ++++++E  + C  LK  ++PDG +SNI RC  V+  ++ G KSHD+
Sbjct: 181  DVGGGRVAIANSCFSMTSEEKSMFCGVLKGAKLPDGSASNISRCVKVSEKKICGYKSHDA 360

Query: 681  HIFMENFIPIAF-SSLPKHVLDPLIEISQFFKNLCASTLRVDELEKME-KNMPIIICQLE 738
            H  +   + I   S++PK V  PLI +S+FF++LC          ++  +N    +    
Sbjct: 361  HFMLHYLLQIPIRSTMPKAVAQPLIRLSRFFRSLCQKGYPNP*SGQLTGRNC*STLFN*R 540

Query: 739  QIFPPGF----FDSMEHLPVHLAYEAILGGPVQYRWMYPFERFMGDSKRAVKNLAKVEGS 794
              F   F    F  +    + L + A       +RWMYP ER++   K  V+N ++ EGS
Sbjct: 541  WFFLLVFLMLWFT*LFIFRMRLDWVA----QFNFRWMYPVERYLCKLKGYVRNRSRPEGS 708

Query: 795  IVAIYTAKETTYFIGHYFVDRLLTPSNTRNE-VQVNDLRDPSTLSVFNLDGRHAG--KVL 851
            I   Y A+E       Y    + T SN +N+    +DL +   +  F+  GR  G  K  
Sbjct: 709  IAEGYVAEEGITICSRYMHKGVDTRSNRKNQNYDDSDLLEVDEIDYFSSIGRPLGGKKNG 888

Query: 852  QYWMVDQKEMRSAHVHVLINCAEVKPYLEE---FIAFYAEFGEGSTVGSIHEYFPAWFKQ 908
            + + +D   +  AH ++L NC E++ Y+ E    +  + +  +     +    F  WFK 
Sbjct: 889  KPFYLDFDSLAQAHRYLLFNCGEIEVYIREHEGIVNSHTKKRKWDKAKAQCLNFSDWFKT 1068

Query: 909  RVYNAEPTDEVIRLRQLSQGPLQCANEFHTYFVNGYKFHTHSWTEGKKTINSGVYVKGVT 968
            R   A+  D   +LR+ S+GP   A  F  Y VNGY+FHT      +KT NSGV +  +T
Sbjct: 1069 R---AKRDDVPPQLREFSRGPNNVAKRFSGYLVNGYRFHTMQ*DARRKTQNSGVTLVSLT 1239

Query: 969  ---DGGEDD--------FYGVIKHIYELSYNDN-KVVLFYCDWFDPSPRWTKINKLCNTV 1016
                  +D+        FYG I  I EL+Y  + K VLF CDW++      +    C   
Sbjct: 1240 ASFASSKDENPRTEPVNFYGAINDIIELNYYGHCKFVLFRCDWYEVEE--DEYGLTC--- 1404

Query: 1017 DIRVDKKYKEYDPFIMAHNVRQVYYVPYPPTLPRKRGWSVAIKTKPRGRIETEERNEEVA 1076
             +  +KK  + D F++A  V+Q +YV  P  + R      A+KT PR   +   ++E   
Sbjct: 1405 -VYFNKKCYQDDAFVIASQVQQCFYVQDPLNVNR----HYALKTDPRDLFKMGNQSE--- 1560

Query: 1077 YQADDMTHVNEIIEVDQVTSWQDSQVEGDQVD-PSILEMRNEVEDENEDVVDD 1128
            ++A  +   +EI       +W    +    ++ PS +    E EDE+    DD
Sbjct: 1561 FEATSVNAADEI-------NWGREDIPRTIIEKPSNILQ*IEEEDEDYSDFDD 1698


>BG452205 weakly similar to GP|1345502|emb TNP2 {Antirrhinum majus}, partial
           (16%)
          Length = 619

 Score =  133 bits (334), Expect = 5e-31
 Identities = 69/172 (40%), Positives = 102/172 (59%), Gaps = 13/172 (7%)
 Frame = +1

Query: 220 LPMNYHAAKRLVMKLGLSVKKIDCCRNGCMLFY-DNEFGINDGPLEECKFCQSPRYGIS- 277
           +P +Y+  + ++  LGL   KID C N CML++ D++  I+      C  C + R+  S 
Sbjct: 121 VPDSYNKTR*MIRDLGLDYSKIDACPNDCMLYWKDHKNDIS------CHVCGASRWIEST 282

Query: 278 ----------KQKRVAVKSMFYLPIIPRLQRLFASMKTASQMTWHHSN-GISGVMRHPSD 326
                     K+ +V+ K + + P+IPRLQRLF   +TA+ + WHH +    G +RHP+D
Sbjct: 283 TESGQIEENKKEHKVSTKILRHFPLIPRLQRLFMCSETATSLRWHHDDCSKDGKLRHPAD 462

Query: 327 GEAWKHFDRVHPDFAADPRNVRLGLCSDGFQPYVQSSAKPYSCWPIIVTPYN 378
           G+AWK F+  HP+FA D RN+RLGL SDGF P+   + K Y  WP+ + PYN
Sbjct: 463 GQAWKDFNGHHPEFARDSRNIRLGLASDGFNPFRAMNLK-YXAWPVXLIPYN 615


>BF650639 weakly similar to GP|22748425|g putative transposon protein {Oryza
           sativa (japonica cultivar-group)}, partial (6%)
          Length = 568

 Score =  129 bits (323), Expect = 8e-30
 Identities = 68/163 (41%), Positives = 94/163 (56%), Gaps = 13/163 (7%)
 Frame = +2

Query: 240 KIDCCRNGCMLFY-DNEFGINDGPLEECKFCQSPRYGIS-----------KQKRVAVKSM 287
           KID C N CML++ D++  I+      C  C + R   S           K+ +V+ K +
Sbjct: 71  KIDACXNDCMLYWKDHKNDIS------CHVCGASRXIESTTEXGQIEENKKEHKVSTKIL 232

Query: 288 FYLPIIPRLQRLFASMKTASQMTWHHSNGIS-GVMRHPSDGEAWKHFDRVHPDFAADPRN 346
            + P+IP LQR F   +TA+ + WHH +    G +RHP+DG+AWK F+  HP+FA D RN
Sbjct: 233 RHFPLIPXLQRXFMCSETATSLRWHHDDXSKDGKLRHPADGQAWKDFNGHHPEFARDSRN 412

Query: 347 VRLGLCSDGFQPYVQSSAKPYSCWPIIVTPYNLPPEMCMTKPY 389
           + LGL SDGF P+   + K YS WP I+ PYN PP +CM   Y
Sbjct: 413 IXLGLASDGFNPFRAMNLK-YSAWPXILIPYNFPPWLCMKAXY 538


>AI974280 weakly similar to GP|20279447|g putative TNP2-like transposon
           protein {Oryza sativa (japonica cultivar-group)},
           partial (8%)
          Length = 457

 Score =  123 bits (309), Expect = 4e-28
 Identities = 63/128 (49%), Positives = 82/128 (63%), Gaps = 1/128 (0%)
 Frame = +1

Query: 392 LSCIVPGPDNPKAGIDVFLQPLIDDLKRLWV-GELTYDISRKQNFKLRAALMWTINDFPA 450
           LS ++PGP +PK  IDV+L+PLID+LK LW  G   YD S KQ F+  AAL+WTI+D PA
Sbjct: 16  LSLLIPGPSSPKRNIDVYLEPLIDELKELWERGFEVYDASSKQLFEAHAALLWTISDLPA 195

Query: 451 YGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRRLKNGFKKDE 510
           Y MLSGWST G+ ACP C  +T +  L+   K+ +   HR FL   H +R+ K GF   +
Sbjct: 196 YTMLSGWSTSGKLACPVCSYDTCSMYLKHSRKTCYMS-HRRFLDPKHRWRKDKKGFDGKK 372

Query: 511 RVFVGPPP 518
            + V P P
Sbjct: 373 EIRVAPFP 396


>AW257182 weakly similar to GP|20279447|g putative TNP2-like transposon
           protein {Oryza sativa (japonica cultivar-group)},
           partial (6%)
          Length = 387

 Score = 99.8 bits (247), Expect = 6e-21
 Identities = 49/94 (52%), Positives = 63/94 (66%), Gaps = 1/94 (1%)
 Frame = +1

Query: 414 IDDLKRLWV-GELTYDISRKQNFKLRAALMWTINDFPAYGMLSGWSTHGRFACPHCMENT 472
           I++LK LW  G  TYD S+ Q F++RAAL+WTI+DFPAY MLSGWST G+ ACP C  NT
Sbjct: 7   IEELKVLWESGVETYDASKNQMFRMRAALLWTISDFPAYAMLSGWSTKGKLACPCCNNNT 186

Query: 473 KAFTLESGGKSSWFDCHRPFLPHNHPFRRLKNGF 506
            +  L+   K  + D HR FLP +H +R  +  F
Sbjct: 187 SSTYLKHSRKMCYMD-HRTFLPMDHAWRENRKSF 285


>BG586318 similar to GP|6069576|dbj| transposon-like ORF {Brassica rapa},
           partial (11%)
          Length = 267

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 42/86 (48%), Positives = 56/86 (64%)
 Frame = +3

Query: 565 WKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYCKRKDLELKPQPN 624
           W+D+LLRHNLDVMHIEKN FDN+ NT+++V+GKTKDN K+R DL   C R +L +    N
Sbjct: 3   WEDHLLRHNLDVMHIEKNFFDNLMNTILNVQGKTKDNLKSRLDLVDICARSELHV--DEN 176

Query: 625 GKLLKPKANYNLSAQEAKLVCQWLKD 650
           G+   P   Y L A     +  W+ +
Sbjct: 177 GR--APFPIYRLDAGGKDALFDWISN 248


>TC82803 similar to PIR|D85049|D85049 probable transposon protein [imported]
           - Arabidopsis thaliana, partial (5%)
          Length = 755

 Score = 57.0 bits (136), Expect(2) = 5e-11
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = +3

Query: 746 FDSMEHLPVHLAYEAILGGPVQYRWMYPFERFM 778
           FDSMEHL +HLAYEA +G PVQYR MYPFER +
Sbjct: 288 FDSMEHLSIHLAYEARVGNPVQYR*MYPFERLI 386



 Score = 29.6 bits (65), Expect(2) = 5e-11
 Identities = 12/18 (66%), Positives = 15/18 (82%)
 Frame = +1

Query: 728 KNMPIIICQLEQIFPPGF 745
           +N+ II+C LEQIFPP F
Sbjct: 235 ENIAIIMC*LEQIFPPSF 288


>BF636730 
          Length = 637

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 30/83 (36%), Positives = 48/83 (57%)
 Frame = +1

Query: 7   YRRWMYDRTFPGRTGLKPQFVEGVDGFISWAWEQEICRDEGGIRCPCLKCRCRHIITDPG 66
           +R+WM +R  P  + +  +F+ GV  F+ +A  Q+  +  G +RCPC  C+CR   +   
Sbjct: 298 HRKWMDNRMRPDNSRVTDEFLAGVCEFVEFACAQDDFKKVGKLRCPCKICKCRKP*S-VD 474

Query: 67  DVKKHLKKVGFMPNYWVWTYNGE 89
           DV KHL   GF  +Y+ W+ +GE
Sbjct: 475 DVMKHLCMKGFKEDYYYWSSHGE 543


>BQ752332 weakly similar to GP|8778366|gb| F15O4.30 {Arabidopsis thaliana},
            partial (6%)
          Length = 268

 Score = 59.3 bits (142), Expect = 8e-09
 Identities = 30/89 (33%), Positives = 45/89 (49%), Gaps = 3/89 (3%)
 Frame = -2

Query: 974  DFYGVIKHIYELSYNDN---KVVLFYCDWFDPSPRWTKINKLCNTVDIRVDKKYKEYDPF 1030
            DFYG++  I E+ +      K VLF C+WFDP       +     VD+   ++Y +++PF
Sbjct: 267  DFYGILTEIIEVEFPGILKLKCVLFKCEWFDPVVNRGVRSIKFGVVDVNGGRRYNKFEPF 88

Query: 1031 IMAHNVRQVYYVPYPPTLPRKRGWSVAIK 1059
            I+A    QV ++PYP        W   IK
Sbjct: 87   ILASQADQVSFLPYPRMRDSGINWLAVIK 1


>BF631908 weakly similar to GP|21450441|gb| putative transposon protein
           5'-partial {Oryza sativa (japonica cultivar-group)},
           partial (17%)
          Length = 681

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 16/169 (9%)
 Frame = +3

Query: 669 TGRLHGMKSHDSHIFMENFIPIAFSSLPKHVLDPLIEISQFFKNLCASTLRVDELEKMEK 728
           T +LH   SH    F  + +  +      H ++ L E++   + L  S + +     +E+
Sbjct: 144 TVKLHRRISHRHSSFSPSTVTHS------HAVELLTELNLTVE-LHTSPIELHSRGSIER 302

Query: 729 NMPIIICQLEQIFPPGFF-----DSMEHL-----------PVHLAYEAILGGPVQYRWMY 772
           + PI   QL+  F   FF        EHL            +  A+EA + GPV YRWMY
Sbjct: 303 HHPI--SQLQI*FHKSFFLFRSRRGREHL*GWIRAGYLRRDLQ*AHEARIAGPVHYRWMY 476

Query: 773 PFERFMGDSKRAVKNLAKVEGSIVAIYTAKETTYFIGHYFVDRLLTPSN 821
           P ERF+   K  V+N    EGSI   Y A E       Y  D + T  N
Sbjct: 477 PIERFILTLKNYVRNRNYPEGSIAEGYVANECLTHCSRYMSDGVQTKFN 623


>TC90382 similar to GP|20161447|dbj|BAB90371. hypothetical protein~similar to
            Arabidopsis thaliana chromosome 1  F8K7.2, partial (13%)
          Length = 1047

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
 Frame = +3

Query: 1004 PRWTKINKLCNTVDIRVDKKYKEYDPFIMAHNVRQVYYVPYPPTLPRKRGWSVAIK--TK 1061
            P   +++   N+V ++ +KK   +  F+     RQ++ V   P       W   +K  TK
Sbjct: 156  PNSLELSVSINSVPMKEEKK--AFSSFVKKGG-RQMFTVELRPGETTIVSWKKLLKDATK 326

Query: 1062 PRGRIETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRN-EVED 1120
            P G   T +++    +           +EV++    Q  +          L M N   +D
Sbjct: 327  PNGSASTSQQSRPEPFPGQP-------VEVEENDPAQPHRFSAVIEKIERLYMGNGSSDD 485

Query: 1121 ENEDVVDDNNEGDHQDNQVDDGDVDEY 1147
            E+   V D+++ D +D+ +DD ++DEY
Sbjct: 486  EDLPDVPDDDQYDTEDSFIDDAELDEY 566


>TC88705 similar to GP|10177834|dbj|BAB11263. gene_id:MCD7.9~unknown protein
           {Arabidopsis thaliana}, partial (32%)
          Length = 1685

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
 Frame = +1

Query: 108 GTNVETNVEYNEDVNTDQFNMMDDM--VADALGVELSYGEDVEDDEEEQPPNEKAQRFYR 165
           GTN E N  Y  + + D     DD     D  G    Y ED+ D+E ++  +E     Y+
Sbjct: 601 GTNNEENEGYASETDDDTSKYDDDTGKYDDDTG---KYDEDINDEEFQEDEHEDLSSSYK 771

Query: 166 LLSESNTPLYEGSSH-SKLSMCVWLLSHKSNYLNPDDGMDDITKMLK 211
              ES   L +  S   K+   VW +    N         D  ++ K
Sbjct: 772 SDVESEPDLSDDPSWLEKIQKSVWNIIQVVNIFQTPVNQSDAARIRK 912


>TC82397 similar to GP|18377877|gb|AAL67124.1 AT3g53630/F4P12_330 {Arabidopsis
            thaliana}, partial (9%)
          Length = 716

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
 Frame = +3

Query: 1021 DKKYKEYDPFIMAHNVRQVYYVPYPPTLPRKRGW-SVAIKTKPRGRIETEERNEEVAYQA 1079
            +KK+K      +A +V  V+++  P T P K  W  V+IK +         R++ +  + 
Sbjct: 132  EKKFKP-----IADHVNAVHHLHDPTTFPFKWSWRDVSIKVQ-------NMRHQYIGVKH 275

Query: 1080 DDMTHVNEIIEVDQVTSWQD----SQVEGD-QVDPSILEMRNEVEDENEDVVDDNNEGDH 1134
               ++ +     D V  W++     +V GD ++ P     + ++ D  E  +DD+++ D 
Sbjct: 276  KIQSNDHGFNWNDGVIHWENFLNYKRVFGDVKIHP-----KPKLNDGFETEIDDSDDSDG 440

Query: 1135 QDNQVDDGDVDE 1146
             ++   DGDV E
Sbjct: 441  DEDHDCDGDVSE 476


>TC89319 similar to PIR|T02350|T02350 hypothetical protein T8F5.5 -
           Arabidopsis thaliana, partial (53%)
          Length = 1436

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 31/120 (25%), Positives = 53/120 (43%), Gaps = 6/120 (5%)
 Frame = +1

Query: 509 DERVFVGPPPKITSEEVWT-----RVCDYPKVTDYGRAVPIPRYGVDHHWTKRSIFWDLP 563
           D  +FVGPPP     E  +     R  +  ++ +     P    GV+H+ +  +I     
Sbjct: 142 DTELFVGPPPPAMVSEAESANEAERFEEVTRIMEVEINSPYDVLGVNHNMSDGNI--KKK 315

Query: 564 YWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARK-DLQIYCKRKDLELKPQ 622
           YWK +LL H     H + N     F  +     + +D EK ++ D +I  K++  +LK +
Sbjct: 316 YWKISLLVHPDKCSHPQAN---QAFIKLNKAFKELQDPEKRKEMDEKIKLKQEQEDLKAE 486


>TC80296 similar to PIR|H86265|H86265 protein F3F19.18 [imported] -
            Arabidopsis thaliana, partial (34%)
          Length = 1734

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/88 (20%), Positives = 38/88 (42%)
 Frame = +3

Query: 1067 ETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEVEDENEDVV 1126
            +  + +++V+  +DD   +      D   S  D   + D V     +  ++ E   +D  
Sbjct: 804  DNAQEDDQVSLNSDDDNQLGS----DNTGSDDDEAEDHDGVSDDENDRSSDYETSGDDAD 971

Query: 1127 DDNNEGDHQDNQVDDGDVDEYNYASDNH 1154
            +  +EGD  ++  +DG + E+    D H
Sbjct: 972  NVEDEGDDLEDSEEDGGISEHEGDGDLH 1055


>BQ155246 
          Length = 387

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 972  EDDFYGVIKHIYELSYNDNKVVLFYCDWFDPSPRWTKINKLCNTVD 1017
            ED FY  I  IY + Y    +V + C++FD  P+WT     C +VD
Sbjct: 153  EDAFYFFIIIIYHVFY----LVNYKCNFFD*KPKWTS----CQSVD 266


>TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-infected
            erythrocyte surface antigen {Plasmodium falciparum},
            partial (2%)
          Length = 2007

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
 Frame = +1

Query: 1058 IKTKPRGRIETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSI------ 1111
            +K    G  ET E  EE + Q ++ T      + +   S Q+     +QV  +       
Sbjct: 292  LKKNEGGEKETGEITEEKSKQENEETSETNSKDKENEESNQNGSDAKEQVGENHEQDSKQ 471

Query: 1112 -LEMRNEVEDENEDVVDDNNEGDHQDNQVDDGDVD----EYNYASDN 1153
              E  N  E   ++  D   E    DNQV DG+ +    E NY+ DN
Sbjct: 472  GTEETNGTEGGEKEEHDKIKEDTSSDNQVQDGEKNNEAREENYSGDN 612


>TC77438 homologue to PIR|T06807|T06807 nucleosome assembly protein 1 - garden
            pea, partial (93%)
          Length = 1607

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
 Frame = +2

Query: 1069 EERNEEVAYQADDMTHVNEIIE---VDQVTSWQDSQV-EGDQVDPSILEMRNEVEDENED 1124
            E+  EE+  Q +    +   I    +    SW   +  +G++      ++ +E +DE++D
Sbjct: 899  EDMAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAAQGEEFG----DLDDEDDDEDDD 1066

Query: 1125 VVDDNNEGDHQDNQVDDGDVDE 1146
              DD+ + D  +++ DD D +E
Sbjct: 1067 AEDDDEDEDEDEDEDDDEDEEE 1132


>TC92189 weakly similar to GP|21536818|gb|AAM61150.1 F-box protein family
            AtFBW2 {Arabidopsis thaliana}, partial (32%)
          Length = 846

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +1

Query: 1102 VEGDQVDPSILEMRNEVEDENEDVVDDNNEGDHQDNQVDDGDVDEYNYASDN 1153
            V   Q  P +  +  +V    E + D ++  D  D++ DD D+DEY+Y  D+
Sbjct: 370  VSVQQKFPKLAVLGPQVIGYYEMLEDCSDISDSSDSEYDDSDMDEYDYDDDS 525


>TC77921 similar to GP|21553837|gb|AAM62930.1 phytochelatin synthetase-like
           protein {Arabidopsis thaliana}, partial (82%)
          Length = 1727

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 137 LGVELSYGEDVEDDEEEQPPNEKAQRFYRLLSESNTPLYEGSSHS 181
           + + L  GE   + E +  PN + +R +++ S ++T L EGS+ S
Sbjct: 360 MDIRLDMGEKGSNLEHDGKPNNRTRRLFKIQSRNSTLL*EGSNSS 494


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.138    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,366,075
Number of Sequences: 36976
Number of extensions: 704713
Number of successful extensions: 3472
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 3376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3446
length of query: 1155
length of database: 9,014,727
effective HSP length: 107
effective length of query: 1048
effective length of database: 5,058,295
effective search space: 5301093160
effective search space used: 5301093160
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)


Medicago: description of AC126782.15