TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC126018.36 + phase: 0 
         (475 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC77995 similar to GP|21104733|dbj|BAB93321. putative receptor p...    28  5.9
BQ151322 homologue to GP|18161357|gb| ABC-2 type transport syste...    28  7.7
TC89778 similar to PIR|T00747|T00747 RING-H2 finger protein RHC1...    28  7.7

>TC77995 similar to GP|21104733|dbj|BAB93321. putative receptor protein
            kinase-like protein {Oryza sativa (japonica
            cultivar-group)}, partial (35%)
          Length = 2455

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 424  LEACVQARNEGRDLAREGNEIIREATKWSPELA 456
            +++CV A  E R   ++  E +RE TK SPE+A
Sbjct: 1986 IKSCVNADQEQRPTMKQICERLREITKISPEVA 2084


>BQ151322 homologue to GP|18161357|gb| ABC-2 type transport system  membrane
           protein {Pyrobaculum aerophilum}, partial (7%)
          Length = 1157

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 14/36 (38%), Positives = 21/36 (57%)
 Frame = +3

Query: 132 ALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGR 167
           A R  D R PV  V++   PPH ++  RD+ N++ R
Sbjct: 747 ARRERDKRPPVVQVRS---PPHAVRRRRDRENEFAR 845


>TC89778 similar to PIR|T00747|T00747 RING-H2 finger protein RHC1a
           [imported] - Arabidopsis thaliana, partial (29%)
          Length = 989

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -2

Query: 42  VSPQPGVPAEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPV 90
           V+P PGVP + A      E+  G W      G+ +L    G C  IE +
Sbjct: 361 VTPVPGVPLKRASMPPCLENLNGIWPP*INKGVVNL----GACSGIESI 227


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.138    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,203,134
Number of Sequences: 36976
Number of extensions: 186642
Number of successful extensions: 716
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of query: 475
length of database: 9,014,727
effective HSP length: 100
effective length of query: 375
effective length of database: 5,317,127
effective search space: 1993922625
effective search space used: 1993922625
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)