TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC126015.11 + phase: 0 
         (371 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AW775710 similar to PIR|T46096|T46 hypothetical protein T25B15.3...   308  3e-84

>AW775710 similar to PIR|T46096|T46 hypothetical protein T25B15.30 -
           Arabidopsis thaliana, partial (29%)
          Length = 492

 Score =  308 bits (788), Expect = 3e-84
 Identities = 151/159 (94%), Positives = 152/159 (94%)
 Frame = +1

Query: 1   MASPKKIGIPWPEFNDGLSYDDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQIT 60
           MA+PKKIGIPWPEFN  LSYDDVVR SDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQIT
Sbjct: 16  MATPKKIGIPWPEFNYRLSYDDVVRRSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQIT 195

Query: 61  LDARVVTDPNTILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGL 120
           LDARVVTDPNTILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGL
Sbjct: 196 LDARVVTDPNTILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGL 375

Query: 121 FQQRTVLTQLQWETNNKSTIEAHQKPHPVPVHRLGRGTS 159
           FQQRTVLTQLQWETNN STIEAHQKPHPVPVH   RGTS
Sbjct: 376 FQQRTVLTQLQWETNNMSTIEAHQKPHPVPVHPPRRGTS 492


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.318    0.137    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,005,351
Number of Sequences: 36976
Number of extensions: 153776
Number of successful extensions: 714
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of query: 371
length of database: 9,014,727
effective HSP length: 98
effective length of query: 273
effective length of database: 5,391,079
effective search space: 1471764567
effective search space used: 1471764567
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)