BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126010.8 - phase: 0
(727 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC81795 similar to PIR|T45891|T45891 ABC transporter-like protei... 187 1e-47
TC84278 similar to PIR|T02567|T02567 probable ATP-binding casset... 182 5e-46
TC80149 similar to GP|22137204|gb|AAM91447.1 At2g01320/F10A8.20 ... 162 3e-40
TC86205 similar to PIR|A86289|A86289 probable ABC transporter [i... 153 3e-37
TC81334 weakly similar to GP|19423992|gb|AAL87274.1 putative ABC... 98 4e-36
TC81415 weakly similar to PIR|A84509|A84509 probable ABC transpo... 143 2e-34
TC83735 similar to PIR|A84509|A84509 probable ABC transporter [i... 141 1e-33
BE997422 similar to GP|9758023|dbj ABC transporter-like protein ... 115 5e-26
BE205528 similar to GP|12382006|d putative ABC transporter prote... 114 2e-25
TC91754 similar to GP|20260310|gb|AAM13053.1 unknown protein {Ar... 112 7e-25
AW685718 homologue to GP|20522008|d pleiotropic drug resistance ... 100 3e-21
TC82289 similar to GP|12382007|dbj|BAB21276. putative ABC transp... 97 3e-20
BQ139036 similar to GP|14423315|g ATP-binding cassette transport... 96 4e-20
AJ499813 similar to GP|9279716|db ABC transporter {Arabidopsis t... 92 5e-19
AW560126 similar to GP|15292753|gb putative ABC transporter prot... 89 5e-18
TC88124 weakly similar to PIR|T45888|T45888 ABC transporter-like... 89 5e-18
TC92726 similar to PIR|T04229|T04229 ABC-type transport protein ... 87 2e-17
TC83582 similar to GP|22128707|gb|AAM92819.1 putative ABC transp... 86 5e-17
TC86206 similar to GP|20522008|dbj|BAB92011. pleiotropic drug re... 85 9e-17
TC88206 similar to PIR|A86289|A86289 probable ABC transporter [i... 82 7e-16
>TC81795 similar to PIR|T45891|T45891 ABC transporter-like protein -
Arabidopsis thaliana, partial (42%)
Length = 1184
Score = 187 bits (475), Expect = 1e-47
Identities = 106/315 (33%), Positives = 170/315 (53%), Gaps = 39/315 (12%)
Frame = +3
Query: 451 FANSYIGETWILMRRNFTNIRRTPELFLSRLMVLTFMGVMMATMFHNPKNTLQGITNRLS 510
FAN + E ++ +R+ N RR PELF RL + G ++AT+F+ ++ +G+ RL
Sbjct: 57 FANPFWIEMAVMGKRSLLNSRRMPELFGIRLGAVLVTGGILATIFYRLDDSPKGVQERLG 236
Query: 511 FFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASCYTIASLITHMPFLALQALAY 570
FF F + F++ +A+P F+QER+IF+RET++NAYR S Y +A I +P L + A+
Sbjct: 237 FFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHSIISLPALIFLSFAF 416
Query: 571 AAIVWFALELRG---PFIYFFLVLFISLLSTNSFVVFVSSIVPNYILGYAAVIAFTALFF 627
+ ++++ L G F+++F + S + +SFV F+S +V + +LG+ V+A A F
Sbjct: 417 SVTTFWSVGLAGGTSGFLFYFFTILASFWAGSSFVTFLSGVVSHVMLGFTVVVAILAYFL 596
Query: 628 LFCGYFLSSEDIPLYWRWMNKVSTMTYPYEGLLMNEY----------------------- 664
LF G+F+S + IP YW W + +S + YP+EG+L NE+
Sbjct: 597 LFSGFFISRDRIPPYWIWFHYLSLVKYPFEGVLQNEFDIKPPRCFVKGIQMFDNTPLGDV 776
Query: 665 ----------QTNETFGSNDGVS---ITGFDILKSLHIGTEEIKKRNNVLIMLGWAVLYR 711
+ T G+N S +TG DILK G ++ K N + I + +R
Sbjct: 777 PGSLKVELLKSLSSTLGTNITSSTCVVTGADILKQQ--GVTQLSKWNCLFITIALGFFFR 950
Query: 712 ILFYIILRFASKNQR 726
LFY+ L F SKN+R
Sbjct: 951 FLFYLALLFGSKNKR 995
>TC84278 similar to PIR|T02567|T02567 probable ATP-binding cassette protein
T16B24.1 - Arabidopsis thaliana, partial (28%)
Length = 835
Score = 182 bits (461), Expect = 5e-46
Identities = 104/199 (52%), Positives = 134/199 (67%), Gaps = 1/199 (0%)
Frame = +3
Query: 123 MLTVYETLMFAADFRLG-PLSAVDKRQRVEKLIEQLGLSSSRNTYIGDEGTRGVSGGERR 181
MLTV ETL FAA+FRL LS K RV+ LI+QLGL ++ T IGDEG RGVSGGERR
Sbjct: 12 MLTVEETLTFAAEFRLPRSLSKSKKNARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERR 191
Query: 182 RVSIGVDIIHGPSLLFLDEPTSGLDSTSALSVIEKLHDIARNGSTVILTIHQPSSRIQLL 241
RVSIG+DIIH P +LFLDEPTSGLDSTSA V++ L IA++GS VI++IHQPS RI L
Sbjct: 192 RVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGL 371
Query: 242 LDHLIILARGQLMFQGSLKDVGHHLNRMGRKIPKGENPIENLIDVIQEYDQCDFVGVEVL 301
LD +I L+RGQ ++ GS + + G IP+G+N E +D+I+E + G + L
Sbjct: 372 LDRMIFLSRGQTVYSGSPSQLPSYFAEFGHPIPEGDNRTEFALDLIRELEGSP-GGTKSL 548
Query: 302 AEFARTGMKPPLLSDMEEI 320
EF ++ L + +I
Sbjct: 549 VEFNKSWQSMTKLHNNNDI 605
Score = 32.7 bits (73), Expect = 0.51
Identities = 17/45 (37%), Positives = 24/45 (52%)
Frame = +3
Query: 432 DENDYLTPTNSSQEHLGPKFANSYIGETWILMRRNFTNIRRTPEL 476
+ N T +SS + P +AN + E L +R+ TN RR PEL
Sbjct: 699 NSNAIATSPSSSSSSIVPTYANPFWIELLTLSKRSITNSRRMPEL 833
>TC80149 similar to GP|22137204|gb|AAM91447.1 At2g01320/F10A8.20
{Arabidopsis thaliana}, partial (44%)
Length = 1366
Score = 162 bits (411), Expect = 3e-40
Identities = 95/252 (37%), Positives = 149/252 (58%), Gaps = 6/252 (2%)
Frame = +3
Query: 51 LLHDITGYAPKGCITAVMGPSGAGKSTLLDGLAGRIASGS---LKGKVSLDGNSVNASLI 107
LL +++G A G + A+MGPSG+GK+TLL+ LAG++++ L G + +G + +
Sbjct: 402 LLKNLSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLSASPRLHLSGLLEFNGKPSSRNAY 581
Query: 108 KRTSAYIMQEDRLFPMLTVYETLMFAADFRLGPLSAVDKRQR-VEKLIEQLGLSSSRNTY 166
K AY+ QED F LTV ETL A + +L +S+ ++R V L+ + GL S +T
Sbjct: 582 K--FAYVRQEDLFFSQLTVRETLSLAIELQLHNISSAEERDEYVNNLLFKTGLVSCADTN 755
Query: 167 IGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSALSVIEKLHDIARNGST 226
+GD RG+SGGE++R+S+ +++ PS++F DEPT+GLD+ A V+E L +A +G T
Sbjct: 756 VGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVMETLRQLALDGHT 935
Query: 227 VILTIHQPSSRIQLLLDHLIILARGQLMFQGSLKDVG-HHLNRMGRKIPKGENPIENLID 285
VI +IHQP + D +++L G L++ G D + ++ G P NP E L D
Sbjct: 936 VICSIHQPRGSVYSKFDDIVLLTDGSLVYAGPAGDEPLTYFSKFGYHCPDHVNPAEFLAD 1115
Query: 286 VIQ-EYDQCDFV 296
+I +Y D V
Sbjct: 1116LISIDYSSSDSV 1151
>TC86205 similar to PIR|A86289|A86289 probable ABC transporter [imported] -
Arabidopsis thaliana, partial (52%)
Length = 2721
Score = 153 bits (386), Expect = 3e-37
Identities = 105/329 (31%), Positives = 174/329 (51%), Gaps = 11/329 (3%)
Frame = +1
Query: 25 LEFESLTYTVTKKKKVDGKWSNED-VDLLHDITGYAPKGCITAVMGPSGAGKSTLLDGLA 83
+ F+ + Y+V ++ + ED + LL ++G G +TA+MG SGAGK+TL+D LA
Sbjct: 679 ITFDDIVYSVDMPAEMKEQGVTEDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 858
Query: 84 GRIASGSLKGKVSLDGNSVNASLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRLGPLSA 143
GR G + G + + G R S Y Q D P +TVYE+L+++A RL S
Sbjct: 859 GRKTGGYIDGDIKVSGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLP--SG 1032
Query: 144 VDKRQR---VEKLIEQLGLSSSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDE 200
VD R ++++++ + L+S RN+ +G G G+S +R+R++I V+++ PS++F+DE
Sbjct: 1033 VDSNTRKMFIDEVMDLVELNSLRNSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1212
Query: 201 PTSGLDSTSALSVIEKLHDIARNGSTVILTIHQPSSRIQLLLDHLIILAR-GQLMFQGSL 259
PTSGLD+ +A V+ + + G TV+ TIHQPS I D L ++ R GQ ++ G L
Sbjct: 1213 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1392
Query: 260 KDVGHHLNRMGR------KIPKGENPIENLIDVIQEYDQCDFVGVEVLAEFARTGMKPPL 313
HL + KI G NP +++V + + +GV +F L
Sbjct: 1393 GRHSTHLIKYFESIDGVSKIKDGYNPATWMLEVTTTAQELN-LGV----DFTDLYKNSDL 1557
Query: 314 LSDMEEIISYTNSIAPSPSPLHRGSKYEE 342
+++I + AP LH +++ +
Sbjct: 1558 YRRNKQLIQELSVPAPGSKDLHFPTQFSQ 1644
Score = 89.7 bits (221), Expect = 3e-18
Identities = 57/242 (23%), Positives = 112/242 (45%), Gaps = 8/242 (3%)
Frame = +1
Query: 442 SSQEHLGPKFANSYIGETWILMRRNFTNIRRTPELFLSRLMVLTFMGVMMATMFHN---P 498
S H +F+ S++ + + + + R P R TF+G+M TMF +
Sbjct: 1609 SKDLHFPTQFSQSFLVQCQACLWKQRWSYWRNPPYTAVRFFFTTFIGLMFGTMFWDLGGK 1788
Query: 499 KNTLQGITNRLSFFIFTVCLFFF--SSNDAVPAFIQERFIFIRETSHNAYRASCYTIASL 556
++ Q + N + ++T LF +S+ P ER +F RE + Y A Y + +
Sbjct: 1789 HSSRQDLLNAVGS-MYTAVLFLGVQNSSSVQPVVAVERTVFYREKAAGMYSALPYAFSQI 1965
Query: 557 ITHMPFLALQALAYAAIVWFALEL---RGPFIYFFLVLFISLLSTNSFVVFVSSIVPNYI 613
+ +P++ QA+ Y AIV+ + F+++ ++ +LL + + ++ PN+
Sbjct: 1966 LVELPYVFAQAVTYGAIVYAMIGFDWTAEKFLWYLFFMYFTLLYFTFYGMMAVAVTPNHH 2145
Query: 614 LGYAAVIAFTALFFLFCGYFLSSEDIPLYWRWMNKVSTMTYPYEGLLMNEYQTNETFGSN 673
+ AF A++ LF G+ + IP++WRW + + GL+ +++ T S
Sbjct: 2146 VASIVAAAFYAIWNLFSGFVVPRPSIPIWWRWYYWACPVAWTIYGLVASQFGDITTVMST 2325
Query: 674 DG 675
+G
Sbjct: 2326 EG 2331
Score = 34.3 bits (77), Expect = 0.17
Identities = 25/85 (29%), Positives = 41/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 584 FIYFFLVLFISLLSTNSFVVFVS----SIVPNYILGYAAVIAFTALFFLFCGYFLSSEDI 639
F F ++ F+S +++ F S IV N G A++ F +L G+ LS +DI
Sbjct: 103 FKQFVVLFFMSQMASGLFRAIASLGRNMIVAN-TFGSFALLTFLSLG----GFILSRKDI 267
Query: 640 PLYWRWMNKVSTMTYPYEGLLMNEY 664
+W W +S + Y L+ NE+
Sbjct: 268 KGWWIWGYWISPLMYGQNALMANEF 342
>TC81334 weakly similar to GP|19423992|gb|AAL87274.1 putative ABC
transporter protein {Arabidopsis thaliana}, partial
(29%)
Length = 977
Score = 98.2 bits (243), Expect(2) = 4e-36
Identities = 57/141 (40%), Positives = 87/141 (61%), Gaps = 3/141 (2%)
Frame = +2
Query: 45 SNEDVDLLHDITGYAPKGCITAVMGPSGAGKSTLLDGLAGRIASGSLK-GKVSLDGNSVN 103
+NE +L +TGYA + A+MGPSG GKSTLLD LAGR+ S + + G + ++GN
Sbjct: 116 TNESKSILQGLTGYAKPAQLLAIMGPSGCGKSTLLDALAGRLGSNTRQSGDILINGN--K 289
Query: 104 ASLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRL-GPLSAVDKRQRVEKLIEQLGLSSS 162
+L TSAY+ Q+D L LTV E + ++A +L +S +K++R + I ++GL +
Sbjct: 290 QALAYGTSAYVTQDDTLLTTLTVKEAVYYSAQLQLPDTMSNEEKKERADFTIREMGLQDA 469
Query: 163 RNTYIGDEGT-RGVSGGERRR 182
NT G +G+SGG++RR
Sbjct: 470 INTRNRKGGVLKGISGGQKRR 532
Score = 72.4 bits (176), Expect(2) = 4e-36
Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Frame = +3
Query: 174 GVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSALSVIEKLHDIARNGS---TVILT 230
GV GE VSI ++I+ P LLFLDEPTSGLDS ++ V++++ + + T++ +
Sbjct: 516 GVKKGE---VSISIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDKKDGIQRTIVAS 686
Query: 231 IHQPSSRIQLLLDHLIILARGQLMFQGSLKDVGHHLNRMGRKIPKGENPIENLIDVI-QE 289
IHQPS+ + L +L +L+ G+ ++ G G P +NP ++L+ I ++
Sbjct: 687 IHQPSTEVFQLFHNLCLLSSGKTVYFGPASAASEFFASNGFPCPPLQNPSDHLLKTINKD 866
Query: 290 YDQ 292
+DQ
Sbjct: 867 FDQ 875
>TC81415 weakly similar to PIR|A84509|A84509 probable ABC transporter
[imported] - Arabidopsis thaliana, partial (13%)
Length = 702
Score = 143 bits (361), Expect = 2e-34
Identities = 81/195 (41%), Positives = 121/195 (61%), Gaps = 7/195 (3%)
Frame = +2
Query: 16 HKPVSFTGGLEFESLTYTVTKKKKVDGKWSN-----EDVDLLHDITGYAPKGCITAVMGP 70
H P + L +LTYT+ K + + + V++L ++ A I AV+GP
Sbjct: 116 HSPPPTSYKLSINNLTYTLHPYKTIPFSFKSLTQKPHPVNILKSVSFVARTSEIVAVVGP 295
Query: 71 SGAGKSTLLDGLAGRIASGSLKGK-VSLDGNSVNA-SLIKRTSAYIMQEDRLFPMLTVYE 128
SG GKSTLL +AGRI K +S++ + ++ S +++ ++ QED L P+LTV E
Sbjct: 296 SGTGKSTLLRIIAGRIKDKDFNPKTISINDHPMSTPSQLRKICGFVSQEDNLLPLLTVKE 475
Query: 129 TLMFAADFRLGPLSAVDKRQRVEKLIEQLGLSSSRNTYIGDEGTRGVSGGERRRVSIGVD 188
TL+F A FRL ++ ++ RVE L+++LGL ++++GD+ RGVSGGER+RVSIGVD
Sbjct: 476 TLLFGAKFRLKEMTPKERELRVENLMQELGLFHVAHSFVGDDENRGVSGGERKRVSIGVD 655
Query: 189 IIHGPSLLFLDEPTS 203
+IH P +L LDEPTS
Sbjct: 656 MIHNPPILVLDEPTS 700
>TC83735 similar to PIR|A84509|A84509 probable ABC transporter [imported] -
Arabidopsis thaliana, partial (34%)
Length = 872
Score = 141 bits (355), Expect = 1e-33
Identities = 77/221 (34%), Positives = 132/221 (58%), Gaps = 8/221 (3%)
Frame = +1
Query: 508 RLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASCYTIASLITHMPFLALQA 567
R+ F F + S+ +A+P F+QER I ++ETS +YR S Y IA+ + ++PFL + A
Sbjct: 10 RVGLFAFILTFLLSSAIEALPIFLQEREILMKETSSGSYRVSSYAIANGLVYLPFLLILA 189
Query: 568 LAYAAIVWFALELRG---PFIYFFLVLFISLLSTNSFVVFVSSIVPNYILGYAAVIAFTA 624
+ +A +++ + L F++F L++++ L + NS VV S++VPN+I+G + +
Sbjct: 190 ILFAVPLYWIIGLNQNFTAFLHFLLLIWLVLYTANSVVVCFSALVPNFIVGNSIIAGVIG 369
Query: 625 LFFLFCGYFLSSEDIPLYWRWMNKVSTMTYPYEGLLMNEYQTNE-----TFGSNDGVSIT 679
FLF GYF+S+ +IP YW +M+ +S YP+EG L+NE+ ++ FG+ +
Sbjct: 370 SSFLFSGYFISNHEIPNYWIFMHYLSLFKYPFEGFLINEFSNSKKCLEYMFGA---CVMK 540
Query: 680 GFDILKSLHIGTEEIKKRNNVLIMLGWAVLYRILFYIILRF 720
G D+LK G E + NV +M+ + +YR + Y+ILR+
Sbjct: 541 GEDVLKEEGYGGES-SRWKNVGVMVCFIFVYRFISYVILRY 660
>BE997422 similar to GP|9758023|dbj ABC transporter-like protein {Arabidopsis
thaliana}, partial (27%)
Length = 790
Score = 115 bits (289), Expect = 5e-26
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 38/215 (17%)
Frame = +1
Query: 551 YTIASLITHMPFLALQALAYAAIVWFALELRGPF---IYFFLVLFISLLSTNSFVVFVSS 607
Y I+ I +P L +LA+A I ++A+ L G F +++F+++ S + NSFV F+S
Sbjct: 4 YVISHAIVALPALLFLSLAFACITFWAVGLDGGFSGFLFYFVIILASFWAGNSFVSFLSG 183
Query: 608 IVPNYILGYAAVIAFTALFFLFCGYFLSSEDIPLYWRWMNKVSTMTYPYEGLLMNEY--- 664
+VP+ +LGY V+A A F LF G+F++ + IP YW W + +S + YPYE +L NE+
Sbjct: 184 VVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPGYWIWFHYMSLVKYPYEAVLQNEFSDA 363
Query: 665 -----------------------------QTNETFGSNDGVS---ITGFDILKSLHIGTE 692
++T G S TG D+LK +
Sbjct: 364 AKCFVRGVQIFDNSPLASVSDALKLKLLDSMSDTLGMKITASTCLTTGTDLLKQNAV--T 537
Query: 693 EIKKRNNVLIMLGWAVLYRILFYIILRFASKNQRS 727
++ K N + + + W +RILFY+ L SKN+RS
Sbjct: 538 DLSKWNCLWVTVAWGFFFRILFYLSLLLGSKNKRS 642
>BE205528 similar to GP|12382006|d putative ABC transporter protein {Oryza
sativa (japonica cultivar-group)}, partial (14%)
Length = 617
Score = 114 bits (284), Expect = 2e-25
Identities = 69/205 (33%), Positives = 115/205 (55%), Gaps = 11/205 (5%)
Frame = +1
Query: 93 GKVSLDGNSVNASLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRLGP-LSAVDKRQRVE 151
G +++ G R S Y Q D P +TVYE+L+++A RL P ++A ++ VE
Sbjct: 10 GNITISGFPKKQETFARISGYCEQNDIHSPYVTVYESLLYSAWLRLSPDINAETRKMFVE 189
Query: 152 KLIEQLGLSSSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAL 211
+++E + L +N +G G G+S +R+R++I V+++ PS++F+DEPTSGLD+ +A
Sbjct: 190 EVMELVELKPLQNALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 369
Query: 212 SVIEKLHDIARNGSTVILTIHQPSSRIQLLLDHLIILAR-GQLMFQGSLKDVGHHLNRM- 269
V+ + + G TV+ TIHQPS I D L++L + GQ ++ G L GH+ + +
Sbjct: 370 IVMRTVRNTVNTGRTVVCTIHQPSIDIFESFDELLLLKQGGQEIYVGPL---GHNSSNLI 540
Query: 270 --------GRKIPKGENPIENLIDV 286
KI G NP +++V
Sbjct: 541 NYFEGIHGVSKIKDGYNPATWMLEV 615
>TC91754 similar to GP|20260310|gb|AAM13053.1 unknown protein {Arabidopsis
thaliana}, partial (25%)
Length = 663
Score = 112 bits (279), Expect = 7e-25
Identities = 69/156 (44%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
Frame = +2
Query: 51 LLHDITGYAPKGCITAVMGPSGAGKSTLLDGLAGRIASGS-LKGKVSLDGNSVNASLIKR 109
LL+ + G+A G I A+MGPSG+GKSTLLD LAGR+A + G V L+G
Sbjct: 200 LLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGRLAKNVVMTGNVFLNGKKKTPGY--G 373
Query: 110 TSAYIMQEDRLFPMLTVYETLMFAADFRL-GPLSAVDKRQRVEKLIEQLGLSSSRNTYIG 168
AY+ QED L LTV ET+ ++A RL +S + V+ I ++GL + IG
Sbjct: 374 FVAYVTQEDVLLGTLTVKETITYSAHLRLPSTMSKEEINGLVDATIIEMGLHDCADRLIG 553
Query: 169 DEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSG 204
+ G+SGGER+R SI ++I+ P LFLDEPTSG
Sbjct: 554 NWHLXGISGGERKRTSIALEILTRPRXLFLDEPTSG 661
>AW685718 homologue to GP|20522008|d pleiotropic drug resistance like protein
{Nicotiana tabacum}, partial (12%)
Length = 613
Score = 99.8 bits (247), Expect = 3e-21
Identities = 59/176 (33%), Positives = 105/176 (59%), Gaps = 11/176 (6%)
Frame = +2
Query: 122 PMLTVYETLMFAADFRL-GPLSAVDKRQRVEKLIEQLGLSSSRNTYIGDEGTRGVSGGER 180
P +TVYE+L+++A RL + + ++ +E+++E + L+ RN+ +G G G+S +R
Sbjct: 8 PHVTVYESLVYSAWLRLPADVDSNTRKMFIEEVMELVELNPLRNSLVGLPGVNGLSTEQR 187
Query: 181 RRVSIGVDIIHGPSLLFLDEPTSGLDSTSALSVIEKLHDIARNGSTVILTIHQPSSRIQL 240
+R++I V+++ PS++F+DEPTSGLD+ +A V+ + + G TV+ TIHQPS I
Sbjct: 188 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE 367
Query: 241 LLDHLIILAR-GQLMFQGSLKDVGHHLNRMGR---------KIPKGENPIENLIDV 286
D L ++ R G+ ++ G L G H +++ + KI G NP +++V
Sbjct: 368 AFDELFLMKRGGEEIYVGPL---GRHSSQLIKYFESIEGVSKIKDGYNPATWMLEV 526
>TC82289 similar to GP|12382007|dbj|BAB21276. putative ABC transporter
protein {Oryza sativa (japonica cultivar-group)},
partial (25%)
Length = 1108
Score = 96.7 bits (239), Expect = 3e-20
Identities = 72/258 (27%), Positives = 120/258 (45%), Gaps = 10/258 (3%)
Frame = +3
Query: 93 GKVSLDGNSVNASLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRLGPLSAVDKRQRVEK 152
G +++ G R S Y Q DR +P + MF VE+
Sbjct: 9 GNITISGFPKKQETFARISGYCEQNDRHWPDINAETRKMF-----------------VEE 137
Query: 153 LIEQLGLSSSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSALS 212
++E + L +N +G G G+S +R+R++I V+++ PS++F+DEPTSGLD+ +A
Sbjct: 138 VMELVELKPLQNALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 317
Query: 213 VIEKLHDIARNGSTVILTIHQPSSRIQLLLDHLIILAR-GQLMFQGSLKDVGHHLNRM-- 269
V+ + + G TV+ TIHQPS I D L++L + GQ ++ G L GH+ + +
Sbjct: 318 VMRTVRNTVNTGRTVVCTIHQPSIDIFESFDELLLLKQGGQEIYVGPL---GHNSSNLIN 488
Query: 270 -------GRKIPKGENPIENLIDVIQEYDQCDFVGVEVLAEFARTGMKPPLLSDMEEIIS 322
KI G NP +++V + E+ +FA L + +I
Sbjct: 489 YFEGIHGVSKIKDGYNPATWMLEVTTSSKE-----RELGIDFAEVYQNSELYRRNKALIK 653
Query: 323 YTNSIAPSPSPLHRGSKY 340
++ AP L+ S+Y
Sbjct: 654 ELSTPAPCSKDLYFASQY 707
>BQ139036 similar to GP|14423315|g ATP-binding cassette transporter Atr5
{Mycosphaerella graminicola}, partial (14%)
Length = 673
Score = 96.3 bits (238), Expect = 4e-20
Identities = 58/144 (40%), Positives = 90/144 (62%), Gaps = 6/144 (4%)
Frame = +1
Query: 150 VEKLIEQLGLSSSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLL-FLDEPTSGLDST 208
V+ +IE L L +T IG G G+S +R+RV+IGV+++ PS+L FLDEPTSGLD
Sbjct: 10 VDTIIELLELYDLEHTLIGRVGA-GLSVEQRKRVTIGVELVSKPSILIFLDEPTSGLDGQ 186
Query: 209 SALSVIEKLHDIARNGSTVILTIHQPSSRIQLLLDHLIILAR-GQLMFQGSLKDVG---- 263
+A + + L +A G V++TIHQPS+++ D L++LA+ G+ ++ G + D G
Sbjct: 187 AAFNTVRFLRKLADVGQAVLVTIHQPSAQLFAQFDTLLLLAKGGKTVYFGEIGDNGDTVK 366
Query: 264 HHLNRMGRKIPKGENPIENLIDVI 287
+ +R G P+ NP E +IDV+
Sbjct: 367 EYFDRNGVPCPRDVNPAEFMIDVV 438
>AJ499813 similar to GP|9279716|db ABC transporter {Arabidopsis thaliana},
partial (13%)
Length = 573
Score = 92.4 bits (228), Expect = 5e-19
Identities = 49/131 (37%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
Frame = -3
Query: 145 DKRQRVEKLIEQLGLSSSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSG 204
+K Q VE++++ + L S ++ +G G G+S +R+R++I V+++ PS++F+DEPTSG
Sbjct: 547 EKMQFVEQVMDLVELQSLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 368
Query: 205 LDSTSALSVIEKLHDIARNGSTVILTIHQPSSRIQLLLDHLIILAR-GQLMFQGSLKDVG 263
LD+ +A V+ + + G TV+ TIHQPS I D LI++ R GQL++ G L
Sbjct: 367 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELILMKRGGQLVYGGPLGRNS 188
Query: 264 HHLNRMGRKIP 274
H + +IP
Sbjct: 187 HKIIEYFEEIP 155
>AW560126 similar to GP|15292753|gb putative ABC transporter protein
{Arabidopsis thaliana}, partial (17%)
Length = 727
Score = 89.4 bits (220), Expect = 5e-18
Identities = 50/125 (40%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 45 SNEDVDLLHDITGYAPKGCITAVMGPSGAGKSTLLDGLAGRIASGSLKGKVSLDGNSVNA 104
S ++ +L+++TG A G I A++GPSG+GKSTLL+ LAGR+ + +L G + + + ++
Sbjct: 354 STQERIILNNVTGIAYPGEILAILGPSGSGKSTLLNSLAGRLHTHNLTGTILANSSKLDR 533
Query: 105 SLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRL-GPLSAVDKRQRVEKLIEQLGLSSSR 163
++++RT ++ Q+D L+P LTV ETL+F + RL L+ K E I +LGL+
Sbjct: 534 TILRRT-GFVTQDDILYPHLTVRETLVFCSMLRLPRQLTRETKVAAAESAIAELGLTKCE 710
Query: 164 NTYIG 168
NT IG
Sbjct: 711 NTIIG 725
>TC88124 weakly similar to PIR|T45888|T45888 ABC transporter-like protein -
Arabidopsis thaliana, partial (27%)
Length = 1641
Score = 89.4 bits (220), Expect = 5e-18
Identities = 56/196 (28%), Positives = 102/196 (51%), Gaps = 10/196 (5%)
Frame = +3
Query: 159 LSSSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSALSVIEKLH 218
L +++ +G G G+S +R+R++I V+++ PS++F+DEPTSGLD+ +A V+ +
Sbjct: 9 LDDIKDSLVGIAGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVK 188
Query: 219 DIARNGSTVILTIHQPSSRIQLLLDHLIIL-ARGQLMFQGSLKDVGHHLNRMGR------ 271
++ G T + TIHQPS I D LI++ + G++++ G+L GHH +R+
Sbjct: 189 NVVTTGRTTVCTIHQPSIDIFETFDELILMKSGGKIIYNGAL---GHHSSRLIEYFQSIS 359
Query: 272 ---KIPKGENPIENLIDVIQEYDQCDFVGVEVLAEFARTGMKPPLLSDMEEIISYTNSIA 328
KI NP +++ V E+ +FA + L D E++ +
Sbjct: 360 GVPKIKDNYNPATWMLEATSA-----AVEDELKIDFANIYKESHLHRDTLELVRQLSEPE 524
Query: 329 PSPSPLHRGSKYEEKS 344
PS LH +++ + +
Sbjct: 525 PSSKDLHFSTRFPQSN 572
Score = 72.4 bits (176), Expect = 6e-13
Identities = 56/235 (23%), Positives = 100/235 (41%), Gaps = 9/235 (3%)
Frame = +3
Query: 439 PTNSSQE-HLGPKFANSYIGETWILMRRNFTNIRRTPELFLSRLMVLTFMGVMMATMFHN 497
P SS++ H +F S +G+ + + + R+PE L R + + ++ +F
Sbjct: 519 PEPSSKDLHFSTRFPQSNLGQFMACLWKQHLSYWRSPEYNLIRFVFMIVAAIIFGAVFWQ 698
Query: 498 PK---NTLQGITNRL-SFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASCYTI 553
NT Q + N S +I + L + +P ER + RE Y + Y+
Sbjct: 699 KGKEINTQQDLFNVFGSMYIAVIFLGINYCSTILPYVATERSVLYREKFAGMYSSMAYSF 878
Query: 554 ASLITHMPFLALQALAYAAIVW----FALELRGPFIYFFLVLFISLLSTNSFVVFVSSIV 609
A + +P++ +QA+ Y AI + F ++ F YF+ F + L + + S+
Sbjct: 879 AQVAIEIPYILVQAIIYVAITYPMIGFHWSVQKLFWYFYTT-FCTFLYFVYLGMLIMSLS 1055
Query: 610 PNYILGYAAVIAFTALFFLFCGYFLSSEDIPLYWRWMNKVSTMTYPYEGLLMNEY 664
N L A +F LF G+ + IP +W W + + GLL ++Y
Sbjct: 1056LNLDLASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQY 1220
>TC92726 similar to PIR|T04229|T04229 ABC-type transport protein F14M19.30 -
Arabidopsis thaliana, partial (20%)
Length = 585
Score = 87.0 bits (214), Expect = 2e-17
Identities = 59/141 (41%), Positives = 83/141 (58%), Gaps = 1/141 (0%)
Frame = +1
Query: 51 LLHDITGYAPKGCITAVMGPSGAGKSTLLDGLAGRIASGSLKGKVSLDGNSV-NASLIKR 109
+L D++ A I A++GPSGAGKSTLLD L+ R L G +SL+ + + N S ++
Sbjct: 187 ILKDVSLTAYPSEILAIVGPSGAGKSTLLDILSARRL--PLSGTLSLNSSPITNPSTFRK 360
Query: 110 TSAYIMQEDRLFPMLTVYETLMFAADFRLGPLSAVDKRQRVEKLIEQLGLSSSRNTYIGD 169
SAY+ Q D PMLTV ET F+A L P +D V L+ +L L+ NT +
Sbjct: 361 LSAYVPQHDACLPMLTVSETFAFSASL-LKP-KTIDIAAIVSSLLNELRLTHLANTRL-- 528
Query: 170 EGTRGVSGGERRRVSIGVDII 190
G+SGGER+RVSIG+ ++
Sbjct: 529 --NHGLSGGERKRVSIGLSLL 585
>TC83582 similar to GP|22128707|gb|AAM92819.1 putative ABC transporter
{Oryza sativa (japonica cultivar-group)}, partial (52%)
Length = 1158
Score = 85.9 bits (211), Expect = 5e-17
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 6/216 (2%)
Frame = +2
Query: 454 SYIGETWILMRRNFTNIRRTPELFLSRLMVLTFMGVMMATMFHNPKNTLQGITNRLSFFI 513
S++ + +IL +R+F N+ R + RL++ + + + T++ N I R I
Sbjct: 410 SFLLQCYILTKRSFINMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGFMCI 589
Query: 514 FTVCLFFFSSNDA-VPAFIQERFIFIRETSHNAYRASCYTIASLITHMPFLALQALAYAA 572
F V + N P+F+++ +F RE + Y + + I++ ++ PFL L
Sbjct: 590 FCVWICHLHVNWVDSPSFVEDMKVFQRERLNGHYGVTAFVISNTLSATPFLILITFLSGT 769
Query: 573 IVWFALELRGPF---IYFFLVLFISLLSTNSFVVFVSSIVPNYILGYAAVIAFTALFFLF 629
I +F + L F ++F L L+ S+ S ++ ++SIVPN+++G +F L
Sbjct: 770 ICYFMVNLHPGFSHYVFFVLALYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLV 949
Query: 630 CGYFLSSEDIPL-YWRW-MNKVSTMTYPYEGLLMNE 663
GYF DIP WR+ M+ +S + +G N+
Sbjct: 950 SGYFKLPHDIPKPVWRYPMSYISFHYWALQGQYQND 1057
Score = 35.4 bits (80), Expect = 0.078
Identities = 18/58 (31%), Positives = 29/58 (49%)
Frame = +2
Query: 230 TIHQPSSRIQLLLDHLIILARGQLMFQGSLKDVGHHLNRMGRKIPKGENPIENLIDVI 287
+IHQPSS + L D L +L+ G+ ++ G D + G P NP ++ + I
Sbjct: 17 SIHQPSSEVFELFDQLYLLSGGKTVYFGQASDAYEFFAQAGFPCPALRNPSDHFLRCI 190
>TC86206 similar to GP|20522008|dbj|BAB92011. pleiotropic drug resistance
like protein {Nicotiana tabacum}, partial (11%)
Length = 757
Score = 85.1 bits (209), Expect = 9e-17
Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 4/156 (2%)
Frame = +3
Query: 25 LEFESLTYTVTKKKKVDGKWSNED-VDLLHDITGYAPKGCITAVMGPSGAGKSTLLDGLA 83
+ F+ + Y+V ++ + ED + LL ++G G +TA+MG SGAGK+TL+D LA
Sbjct: 252 ITFDDIVYSVDMPAEMKEQGVTEDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 431
Query: 84 GRIASGSLKGKVSLDGNSVNASLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRLGPLSA 143
GR G + G + + G R S Y Q D P +TVYE+L+++A RL S
Sbjct: 432 GRKTGGYIDGDIKVSGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLP--SG 605
Query: 144 VDKRQR---VEKLIEQLGLSSSRNTYIGDEGTRGVS 176
VD R +E++++ + L+S R++ +G G G+S
Sbjct: 606 VDSNTRKMFIEEVMDLVELNSLRDSLVGLPGVSGLS 713
>TC88206 similar to PIR|A86289|A86289 probable ABC transporter [imported] -
Arabidopsis thaliana, partial (21%)
Length = 1483
Score = 82.0 bits (201), Expect = 7e-16
Identities = 61/293 (20%), Positives = 134/293 (44%), Gaps = 8/293 (2%)
Frame = +1
Query: 442 SSQEHLGPKFANSYIGETWILMRRNFTNIRRTPELFLSRLMVLTFMGVMMATMFHN---P 498
S+ + +++ S++ + + + + R P R F+G+M T+F +
Sbjct: 370 SNDLYFSAQYSQSFLVQCLACLWKQHWSYWRNPPYTSVRFFFTVFIGLMFGTIFWDLGRK 549
Query: 499 KNTLQGITNRLSFFIFTVCLFFFSSNDAV--PAFIQERFIFIRETSHNAYRASCYTIASL 556
+ Q + N L ++T LF N + P ER +F RE + Y A Y A +
Sbjct: 550 YSKRQDLFNALGS-MYTADLFLGVQNSSAVQPVVAVERSVFYRERAAGMYSALPYAFAQV 726
Query: 557 ITHMPFLALQALAYAAIVWFALELR---GPFIYFFLVLFISLLSTNSFVVFVSSIVPNYI 613
+ +P++ +QA +Y IV+ + F+++ ++ +L + + +I PN+
Sbjct: 727 LIELPYIFVQAASYGVIVYAMIGFEWTVAKFLWYIFFMYCTLCYFTFYGMMAVAITPNHH 906
Query: 614 LGYAAVIAFTALFFLFCGYFLSSEDIPLYWRWMNKVSTMTYPYEGLLMNEYQTNETFGSN 673
+ AF A++ LF G+ + IP++WRW +++ GL+ +++ +
Sbjct: 907 VASIVAAAFYAIWNLFSGFIVPRPMIPVWWRWYYWGCPVSWTLYGLIASQFGDITKIMES 1086
Query: 674 DGVSITGFDILKSLHIGTEEIKKRNNVLIMLGWAVLYRILFYIILRFASKNQR 726
+ S+ F ++S + G + ++++G AVL+ +F + ++ + +R
Sbjct: 1087ENESVQEF--IRS-YFGMKHDFIGVCAVVVVGTAVLFACIFAVSIKVFNFQRR 1236
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.321 0.137 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,871,897
Number of Sequences: 36976
Number of extensions: 329475
Number of successful extensions: 2510
Number of sequences better than 10.0: 143
Number of HSP's better than 10.0 without gapping: 2371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2462
length of query: 727
length of database: 9,014,727
effective HSP length: 103
effective length of query: 624
effective length of database: 5,206,199
effective search space: 3248668176
effective search space used: 3248668176
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Medicago: description of AC126010.8