BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126009.4 - phase: 0
(162 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC88539 weakly similar to GP|9294157|dbj|BAB02059.1 blue copper-... 322 5e-89
TC80221 weakly similar to GP|9294157|dbj|BAB02059.1 blue copper-... 276 3e-75
TC87415 weakly similar to GP|9294157|dbj|BAB02059.1 blue copper-... 241 1e-64
TC88538 123 3e-29
AW584704 similar to SP|P05790|FBOH Fibroin heavy chain precursor... 122 6e-29
TC93732 homologue to OMNI|NT01MC2635 Integral membrane protein o... 116 3e-27
AJ499309 weakly similar to GP|7670832|gb|A dicyanin {Lycopersico... 105 6e-24
TC86160 weakly similar to PIR|T01605|T01605 phytocyanin At2g4479... 91 2e-19
TC87086 similar to SP|Q41001|BCP_PEA Blue copper protein precurs... 91 2e-19
TC86161 weakly similar to PIR|T01605|T01605 phytocyanin At2g4479... 90 3e-19
TC79513 weakly similar to GP|9885806|gb|AAG01535.1| stellacyanin... 90 4e-19
TC86888 similar to PIR|S71274|S71274 blue copper-binding protein... 89 6e-19
TC91082 similar to PIR|T01852|T01852 probable blue copper-bindin... 88 1e-18
AL384140 weakly similar to GP|2094888|pdb|2 Cucumber Basic Prote... 86 6e-18
BF633206 similar to GP|21553614|gb| blue copper protein putativ... 85 1e-17
TC78623 similar to GP|3860333|emb|CAA10134.1 basic blue copper p... 80 3e-16
TC85491 homologue to GP|6688810|emb|CAB65280.1 basic blue protei... 75 1e-14
TC77284 weakly similar to GP|6688810|emb|CAB65280.1 basic blue p... 74 2e-14
TC89515 weakly similar to GP|11994144|dbj|BAB01165. contains sim... 74 3e-14
TC91371 weakly similar to GP|14140127|emb|CAC39044. uclacyanin 3... 73 4e-14
>TC88539 weakly similar to GP|9294157|dbj|BAB02059.1 blue copper-binding
protein-like {Arabidopsis thaliana}, partial (37%)
Length = 835
Score = 322 bits (824), Expect = 5e-89
Identities = 160/162 (98%), Positives = 162/162 (99%)
Frame = +3
Query: 1 MASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNY 60
MASSRVVLILSISMVLLSSVAIAATD+IVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNY
Sbjct: 105 MASSRVVLILSISMVLLSSVAIAATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNY 284
Query: 61 DPSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLV 120
DP+RHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLV
Sbjct: 285 DPARHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLV 464
Query: 121 ITVLAEGAPAPSPPPSSDAHSVVSSLFGVVMAIMVAIAVIFA 162
ITVLAEGAPAPSPPPSSDAHSVVSSLFGVVMAIMVAIAVIFA
Sbjct: 465 ITVLAEGAPAPSPPPSSDAHSVVSSLFGVVMAIMVAIAVIFA 590
>TC80221 weakly similar to GP|9294157|dbj|BAB02059.1 blue copper-binding
protein-like {Arabidopsis thaliana}, partial (40%)
Length = 813
Score = 276 bits (705), Expect = 3e-75
Identities = 136/162 (83%), Positives = 150/162 (91%)
Frame = +1
Query: 1 MASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNY 60
MA +RV IL+ISMVLLSSVA+AA D+IVGDDKGWTVDF+YTQW QDKVFRVGDNLVFNY
Sbjct: 67 MALNRVA-ILAISMVLLSSVAMAA-DHIVGDDKGWTVDFNYTQWTQDKVFRVGDNLVFNY 240
Query: 61 DPSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLV 120
D ++HN+FKVNGTLF+ CTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSA QMK V
Sbjct: 241 DNTKHNIFKVNGTLFKDCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSAHQMKFV 420
Query: 121 ITVLAEGAPAPSPPPSSDAHSVVSSLFGVVMAIMVAIAVIFA 162
ITVLAEGAPAPSPPPSS+AHS+VSS+FGVVM +VA+A IFA
Sbjct: 421 ITVLAEGAPAPSPPPSSNAHSIVSSMFGVVMVAIVAMATIFA 546
>TC87415 weakly similar to GP|9294157|dbj|BAB02059.1 blue copper-binding
protein-like {Arabidopsis thaliana}, partial (31%)
Length = 710
Score = 241 bits (614), Expect = 1e-64
Identities = 120/161 (74%), Positives = 139/161 (85%)
Frame = +1
Query: 1 MASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNY 60
M SR + L+ISMVLLSSVA+AA D++VGD+KGWTVDF+YTQWAQDKVFRVGDNLVFNY
Sbjct: 67 MTYSRAIY-LAISMVLLSSVAMAA-DHVVGDEKGWTVDFNYTQWAQDKVFRVGDNLVFNY 240
Query: 61 DPSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLV 120
D ++HNVFKV+G LFQSCTFP +NEALSTGKD+IQLKTEGRKWYVCG A+HC+ARQMKLV
Sbjct: 241 DNTKHNVFKVDGKLFQSCTFPSENEALSTGKDVIQLKTEGRKWYVCGKANHCAARQMKLV 420
Query: 121 ITVLAEGAPAPSPPPSSDAHSVVSSLFGVVMAIMVAIAVIF 161
I VL EGAP+ PSS AHS+VSS+FGV+M +AIA F
Sbjct: 421 INVLEEGAPS----PSSSAHSIVSSIFGVIMVATIAIATFF 531
>TC88538
Length = 440
Score = 123 bits (309), Expect = 3e-29
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +1
Query: 101 RKWYVCGVADHCSARQMKLVITVLAEGAPAPSPPPSSDAHSVVSSLFGVVMAIMVAIAVI 160
RKWYVCGVADHCSARQMKLVITVLAEGAPAPSPPPS DAHSVVSSLFGVVMAIMVAIAVI
Sbjct: 1 RKWYVCGVADHCSARQMKLVITVLAEGAPAPSPPPSYDAHSVVSSLFGVVMAIMVAIAVI 180
Query: 161 FA 162
FA
Sbjct: 181 FA 186
>AW584704 similar to SP|P05790|FBOH Fibroin heavy chain precursor (Fib-H)
(H-fibroin). [Silk moth] {Bombyx mori}, partial (0%)
Length = 679
Score = 122 bits (306), Expect = 6e-29
Identities = 66/146 (45%), Positives = 92/146 (62%), Gaps = 3/146 (2%)
Frame = +1
Query: 1 MASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNY 60
MA SR + + ++ + S++A+A D++VGD+ GWT+ DY WA +KVFR+GD L F Y
Sbjct: 52 MALSRSLFLFALIATIFSTMAVAK-DFVVGDESGWTLGVDYQAWAANKVFRLGDTLTFKY 228
Query: 61 DPSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLV 120
+ NV +VNG+ FQSC+ P L++G D I L T GR+WY+ GVA+HC Q KL
Sbjct: 229 VAWKDNVVRVNGSDFQSCSVPWAAPVLTSGHDKIALTTYGRRWYISGVANHCENGQ-KLF 405
Query: 121 ITVLAE---GAPAPSPPPSSDAHSVV 143
I VL + PAPS P +S + S V
Sbjct: 406 INVLPKQDGWYPAPSSPSASPSPSPV 483
>TC93732 homologue to OMNI|NT01MC2635 Integral membrane protein of unknown
function {Magnetococcus sp. MC-1}, partial (2%)
Length = 443
Score = 116 bits (291), Expect = 3e-27
Identities = 57/123 (46%), Positives = 81/123 (65%)
Frame = +3
Query: 1 MASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNY 60
MA SR + + ++ + S++A+A D++VGD+KGWT FDY W +KVFR+GD L FNY
Sbjct: 54 MALSRALFLFALIASIFSTMAVAK-DFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNY 230
Query: 61 DPSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLV 120
+ NV +VNG+ F+SC+ P L++G+D I + T GR+WY+ V DHC Q KL
Sbjct: 231 VGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQ-KLF 407
Query: 121 ITV 123
ITV
Sbjct: 408 ITV 416
>AJ499309 weakly similar to GP|7670832|gb|A dicyanin {Lycopersicon
esculentum}, partial (12%)
Length = 342
Score = 105 bits (263), Expect = 6e-24
Identities = 49/104 (47%), Positives = 71/104 (68%)
Frame = -3
Query: 1 MASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNY 60
MA SRV+ + ++ + S++A+A D++VGD++GW + DY WA +KVFRVGD L FNY
Sbjct: 310 MALSRVLFLFALIATIFSTMAVAK-DFVVGDERGWKLGVDYQYWAANKVFRVGDTLTFNY 134
Query: 61 DPSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWY 104
+ NV +VNG+ FQSC+ P + L++G D I L T GR+WY
Sbjct: 133 VGGKDNVVRVNGSDFQSCSIPWRAPVLTSGHDTILLTTYGRRWY 2
>TC86160 weakly similar to PIR|T01605|T01605 phytocyanin At2g44790
[imported] - Arabidopsis thaliana, partial (34%)
Length = 918
Score = 90.9 bits (224), Expect = 2e-19
Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Frame = +3
Query: 8 LILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPSRHNV 67
+I S ++LL+ ATD+ VGD GW + DYT+WA K F+VGDNLVF Y S H V
Sbjct: 132 MIASFFVLLLAFPYAFATDFTVGDANGWNLGVDYTKWASGKTFKVGDNLVFKYG-SSHQV 308
Query: 68 FKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHC-SARQMKLVITVLAE 126
+V+ + ++SCT + + G + L G+ +++C HC S MKL + V+A
Sbjct: 309 DEVDESDYKSCTSSNAIKNYAGGNSKVPLTKAGKIYFICPTLGHCTSTGGMKLEVNVVAA 488
Query: 127 G---APAPSPPPSSDAHSVVSS 145
P+ +PPP+ + S+
Sbjct: 489 STTPTPSGTPPPTKSPSTTPST 554
>TC87086 similar to SP|Q41001|BCP_PEA Blue copper protein precursor. [Garden
pea] {Pisum sativum}, partial (87%)
Length = 1219
Score = 90.9 bits (224), Expect = 2e-19
Identities = 53/133 (39%), Positives = 72/133 (53%), Gaps = 4/133 (3%)
Frame = +1
Query: 8 LILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPSRHNV 67
LIL +V+ +V AT + VGD GW + DY WA DK F VGD+LVFNY + H V
Sbjct: 451 LILGFFLVINVAVPTLATVHTVGDKSGWAIGSDYNTWASDKTFAVGDSLVFNYG-AGHTV 627
Query: 68 FKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITV---- 123
+V + ++SCT S+G I LK G +++C V HC+ MKL + V
Sbjct: 628 DEVKESDYKSCTTGNSISTDSSGPTTIPLKKAGTHYFICAVPGHCTG-GMKLSVKVKASS 804
Query: 124 LAEGAPAPSPPPS 136
A AP+ +P PS
Sbjct: 805 SASSAPSATPSPS 843
>TC86161 weakly similar to PIR|T01605|T01605 phytocyanin At2g44790
[imported] - Arabidopsis thaliana, partial (17%)
Length = 736
Score = 90.1 bits (222), Expect = 3e-19
Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Frame = +1
Query: 8 LILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPSRHNV 67
+I S ++LL+ ATD+ VGD GWT DYT+WA K F+VGDNLVF Y S H V
Sbjct: 112 MIASFFVLLLAFPYAFATDFTVGDANGWTQGVDYTKWASGKTFKVGDNLVFKYG-SFHQV 288
Query: 68 FKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHC-SARQMKLVITVLAE 126
+V+ + ++SC+ ++ G + L G+ +++C HC S MKL + V+A
Sbjct: 289 NEVDESGYKSCSTSNTIKSYDDGDSKVPLTKAGKIYFICPTPGHCTSTGGMKLEVNVVAA 468
Query: 127 G---APAPSPPPSSDAHSVVSS 145
P+ +PPP+ + S+
Sbjct: 469 STTPTPSGTPPPTKSPSTTPSA 534
>TC79513 weakly similar to GP|9885806|gb|AAG01535.1| stellacyanin-like
protein CASLP1 precursor {Capsicum annuum}, partial
(33%)
Length = 1093
Score = 89.7 bits (221), Expect = 4e-19
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Frame = +3
Query: 6 VVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFD----YTQWAQDKVFRVGDNLVFNYD 61
V ++L+++ L + A T ++VGD GWT+ + YT WA +K F VGD LVFNY
Sbjct: 417 VFVLLAVAANLFHG-SFAQTRHVVGDTTGWTIPTNGASFYTNWASNKTFTVGDTLVFNYA 593
Query: 62 PSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVI 121
+H+V KV T + SC L+ + L G++ ++C V HCSA Q +
Sbjct: 594 SGQHDVAKVTKTAYDSCNGANTLFTLTNSPATVTLNETGQQNFICAVPGHCSAGQKLSIN 773
Query: 122 TVLAEGAPAPSPPPSS 137
V A +P +P PS+
Sbjct: 774 VVKASASPVSAPTPSA 821
Score = 37.4 bits (85), Expect = 0.003
Identities = 20/49 (40%), Positives = 25/49 (50%), Gaps = 4/49 (8%)
Frame = +3
Query: 21 AIAATDYIVGDDKGWTVDFD----YTQWAQDKVFRVGDNLVFNYDPSRH 65
A Y VGD GW + + YT A K F+VGD LVFN+ + H
Sbjct: 945 ATGRVTYTVGDTIGWIIPSNGTAAYTTXASGKSFKVGDILVFNFQLNAH 1091
>TC86888 similar to PIR|S71274|S71274 blue copper-binding protein 15K -
Arabidopsis thaliana, partial (14%)
Length = 697
Score = 89.4 bits (220), Expect = 6e-19
Identities = 51/140 (36%), Positives = 75/140 (53%)
Frame = +1
Query: 2 ASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYD 61
A S + L + LS + ++ATD+IVG ++GW +YT WA + VGD + F Y
Sbjct: 7 AYSFLALSFFFFLFTLSPLPVSATDHIVGANRGWNPGINYTLWANNHTIYVGDYISFRYQ 186
Query: 62 PSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVI 121
+++NVF VN T + +CT S+GKD I R +++CG C+ MK+ +
Sbjct: 187 KNQYNVFLVNQTGYDNCTLDSAVGNWSSGKDFILFNKSMRYYFICG-NGQCN-NGMKVSV 360
Query: 122 TVLAEGAPAPSPPPSSDAHS 141
V P PSPPPSS H+
Sbjct: 361 FV----HPLPSPPPSSSQHN 408
>TC91082 similar to PIR|T01852|T01852 probable blue copper-binding protein
F9D12.16 - Arabidopsis thaliana, partial (55%)
Length = 684
Score = 88.2 bits (217), Expect = 1e-18
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Frame = +2
Query: 24 ATDYIVGDDKGWTV--DFDYTQWAQDKVFRVGDNLVFNYDPSRHNVFKVNGTLFQSCTFP 81
A Y VGD GWT + DY +WA K F++GD ++F Y HNV +V +++SC
Sbjct: 20 AAVYKVGDSAGWTTLGNIDYKKWAATKNFQLGDTIIFEYSAKFHNVMRVTHAMYKSCNAS 199
Query: 82 PKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITVL---AEGAPAPSPPPSS 137
+TG D I++ G ++ CGV HC A Q K+ I VL +PAPS PS+
Sbjct: 200 SPIATFTTGNDTIKITNHGHHFFFCGVPGHCQAGQ-KVDINVLKVSVAASPAPSSSPSA 373
>AL384140 weakly similar to GP|2094888|pdb|2 Cucumber Basic Protein A Blue
Copper Protein, partial (92%)
Length = 441
Score = 85.9 bits (211), Expect = 6e-18
Identities = 43/123 (34%), Positives = 70/123 (55%)
Frame = +2
Query: 1 MASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNY 60
++S+ ++L+ + M++ S A ++IVGD KGW+ F W K F+ GD LVFNY
Sbjct: 53 VSSTSIILMSLLCMLVFHSNMSFAEEHIVGDGKGWS--FGVQNWPAGKTFKAGDTLVFNY 226
Query: 61 DPSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLV 120
P+ HNV VN + + SC P ++ ++G D I L +G +++CG HC+ Q V
Sbjct: 227 SPTSHNVVVVNKSGYDSCVAPKGSKVYTSGADRITL-AKGGNYFLCGFPGHCNLGQKIAV 403
Query: 121 ITV 123
+ +
Sbjct: 404 MLI 412
>BF633206 similar to GP|21553614|gb| blue copper protein putative
{Arabidopsis thaliana}, partial (56%)
Length = 478
Score = 85.1 bits (209), Expect = 1e-17
Identities = 46/141 (32%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Frame = +2
Query: 7 VLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPSRHN 66
+++L++ + L + + AT + VG +GW D+ W+ + F+VGD LVF Y S H+
Sbjct: 53 MILLALLLATLITKEVLATQHNVGGSQGWDPSSDFDSWSSGQTFKVGDQLVFKY-TSMHS 229
Query: 67 VFKVNG-TLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITV-L 124
V +++ + ++ C +LSTGKD+++L G +++ CG HC + MK+ ITV
Sbjct: 230 VVELSDESAYKKCDISTPLNSLSTGKDVVKLDKPGTRYFTCGTLGHCD-QGMKVKITVGN 406
Query: 125 AEGAPAPSPPPSSDAHSVVSS 145
G+ + + PSS + S SS
Sbjct: 407 GNGSSSTASSPSSSSSSPSSS 469
>TC78623 similar to GP|3860333|emb|CAA10134.1 basic blue copper protein
{Cicer arietinum}, partial (98%)
Length = 743
Score = 80.5 bits (197), Expect = 3e-16
Identities = 45/114 (39%), Positives = 60/114 (52%)
Frame = +3
Query: 8 LILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPSRHNV 67
L+L + +L+S A Y VG GWT F+ W K FR GD LVFNY PS HNV
Sbjct: 57 LVLLVCFFVLNSELAHAATYTVGGPGGWT--FNTVGWPNGKRFRAGDTLVFNYSPSAHNV 230
Query: 68 FKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVI 121
VN + SC P + +GKD I+L G+ +++C HC + MK+ I
Sbjct: 231 VAVNKGGYDSCKTPRGAKVYRSGKDQIRL-ARGQNYFICNFVGHCES-GMKIAI 386
>TC85491 homologue to GP|6688810|emb|CAB65280.1 basic blue protein {Medicago
sativa subsp. x varia}, complete
Length = 752
Score = 74.7 bits (182), Expect = 1e-14
Identities = 40/120 (33%), Positives = 65/120 (53%)
Frame = +3
Query: 2 ASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYD 61
A+ +V+++S+ +++ + + A Y VG KGWT F +W K F GD L F Y+
Sbjct: 93 AAMNMVIVISLLCLMVLAKSTNAETYTVGGPKGWT--FGIKKWPNGKSFVAGDVLDFGYN 266
Query: 62 PSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVI 121
P HNV V+ T + C P ++ TG D I+L +G +++C + HC + MK+ I
Sbjct: 267 PKMHNVVLVDQTGYDKCKTPEGSKVFRTGSDQIEL-VKGDNYFICNLPGHCQS-GMKIYI 440
>TC77284 weakly similar to GP|6688810|emb|CAB65280.1 basic blue protein
{Medicago sativa subsp. x varia}, complete
Length = 814
Score = 74.3 bits (181), Expect = 2e-14
Identities = 38/113 (33%), Positives = 62/113 (54%)
Frame = +2
Query: 2 ASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYD 61
AS +V ++S+ +L+ + + A Y VG GWT + D W K F+ GD L FNYD
Sbjct: 113 ASMNMVTLISLLCLLVLAESANAASYTVGGTGGWTYNTD--TWPNGKKFKAGDVLSFNYD 286
Query: 62 PSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSA 114
+ HNV V+ + + +C P + S+G D I+L + G+ +++C HC +
Sbjct: 287 STTHNVVAVDKSGYNNCKTPGGAKVFSSGSDQIRL-SRGQNYFICSYPGHCQS 442
>TC89515 weakly similar to GP|11994144|dbj|BAB01165. contains similarity to
nodulin~gene_id:K10D20.11 {Arabidopsis thaliana},
partial (43%)
Length = 854
Score = 73.9 bits (180), Expect = 3e-14
Identities = 48/155 (30%), Positives = 74/155 (46%), Gaps = 18/155 (11%)
Frame = +2
Query: 1 MASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFD----YTQWAQDKVFRVGDNL 56
+ S+++V LS ++L AA D+IVG KGW+V D + QWA+ F+VGD+L
Sbjct: 59 LRSNKIVHALSWFCLMLMIHKSAAYDFIVGGQKGWSVPSDSNNPFNQWAEKSRFQVGDSL 238
Query: 57 VFNYDPSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQ 116
VFNY + +V V + SC S G + +L G +++ G D+C +
Sbjct: 239 VFNYQSGKDSVLYVKSEDYASCNTGSPITKFSDGHTVFKLNQSGPHFFISGNKDNC-LKN 415
Query: 117 MKLVITVLAE--------------GAPAPSPPPSS 137
K+ + VL++ A PSP SS
Sbjct: 416 EKVTVIVLSDRSNNNNSSNTNQTSNATPPSPQSSS 520
>TC91371 weakly similar to GP|14140127|emb|CAC39044. uclacyanin 3-like
protein {Oryza sativa}, partial (48%)
Length = 686
Score = 73.2 bits (178), Expect = 4e-14
Identities = 42/128 (32%), Positives = 69/128 (53%)
Frame = +1
Query: 1 MASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNY 60
MA S + ++L + + ++ AT Y VGD GW + +Y++W +K F VGD+LVF Y
Sbjct: 40 MAFSNIAMVLCFFLAINMALPTLATFYTVGDSLGWQIGVEYSKWTSEKTFVVGDSLVFLY 219
Query: 61 DPSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLV 120
+ H V +V + + SCT + ++G+ I LKT G +++ CS+ M+L
Sbjct: 220 G-AIHTVDEVAASDYISCTTGNPISSDNSGETTIALKTAGTHYFISATFGDCSS-GMRLA 393
Query: 121 ITVLAEGA 128
+ V A A
Sbjct: 394 VKVEAGSA 417
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.322 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,343,727
Number of Sequences: 36976
Number of extensions: 81422
Number of successful extensions: 714
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of query: 162
length of database: 9,014,727
effective HSP length: 89
effective length of query: 73
effective length of database: 5,723,863
effective search space: 417841999
effective search space used: 417841999
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)
Medicago: description of AC126009.4