BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC125480.1 - phase: 0 /pseudo
(250 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BQ138569 similar to GP|21537040|gb contains similarity to peroxi... 113 6e-26
TC89410 similar to GP|20260666|gb|AAM13231.1 unknown protein {Ar... 86 1e-17
TC86166 similar to PIR|T01729|T01729 mitochondrial solute carrie... 67 5e-12
TC93463 similar to GP|15145367|gb|AAB54239.2 Hypothetical protei... 63 1e-10
TC81297 similar to GP|9758252|dbj|BAB08751.1 calcium-binding tra... 63 1e-10
TC81666 similar to PIR|T07793|T07793 uncoupling protein (clone S... 62 2e-10
CA919248 similar to PIR|B96830|B96 hypothetical protein F19K16.1... 58 4e-09
TC85867 similar to PIR|D84613|D84613 hypothetical protein At2g22... 57 7e-09
TC79679 similar to GP|18377839|gb|AAL67106.1 AT5g01500/F7A7_20 {... 56 1e-08
TC79488 similar to PIR|F84823|F84823 probable peroxisomal membra... 55 3e-08
TC88157 similar to PIR|F84823|F84823 probable peroxisomal membra... 54 4e-08
TC80182 similar to GP|10177187|dbj|BAB10321. mitochondrial carri... 54 7e-08
BG644388 similar to GP|19310699|gb putative mitochondrial carrie... 37 7e-07
BF636076 similar to GP|3068714|gb| unknown {Arabidopsis thaliana... 48 4e-06
TC86125 similar to PIR|T04608|T04608 ADP ATP carrier protein F20... 47 5e-06
AW267865 similar to GP|13992452|em carnitine acyl carrier-like p... 46 2e-05
TC79872 similar to GP|22002462|dbj|BAC06495. mitochondrial uncou... 44 4e-05
BI271317 similar to GP|11067279|gb unknown protein {Arabidopsis ... 43 1e-04
TC79436 similar to GP|18252183|gb|AAL61924.1 putative mitochondr... 43 1e-04
BG644374 similar to GP|21536790|gb ADP/ATP translocase-like prot... 43 1e-04
>BQ138569 similar to GP|21537040|gb contains similarity to peroxisomal
membrane carrier protein {Arabidopsis thaliana}, partial
(40%)
Length = 589
Score = 113 bits (283), Expect = 6e-26
Identities = 65/132 (49%), Positives = 78/132 (58%), Gaps = 12/132 (9%)
Frame = +1
Query: 5 QWEYPVASLTTGFAFITFQYPLDVVQTRLQVHDGRLFSQYPRYNNTTHAIFTIARKEGLK 64
QWE A GFA + +PLDVV+TR QV+DGR S P Y NT HAIFTI R EGL+
Sbjct: 202 QWENATAGAAAGFATVAVMHPLDVVRTRFQVNDGRA-SHLPSYXNTAHAIFTITRIEGLR 378
Query: 65 GLYAGFPAGLLGATISWSLLVFYYGIVKDRHARSKVEK------------SGALMTVCLC 112
GLYAGF G+LG+T+SW L F+Y K R+ARS K +GAL V L
Sbjct: 379 GLYAGFLPGVLGSTLSWGLYFFFYERAKQRYARSXEXKLSPGLHLASXAEAGAL--VSLX 552
Query: 113 ANPAFVVKTRLQ 124
NP ++ T LQ
Sbjct: 553 TNPVWLXXTXLQ 588
>TC89410 similar to GP|20260666|gb|AAM13231.1 unknown protein {Arabidopsis
thaliana}, partial (66%)
Length = 1183
Score = 86.3 bits (212), Expect = 1e-17
Identities = 61/182 (33%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Frame = +2
Query: 14 TTGFAFITFQYPLDVVQTRLQVHDGRLFSQYPRYNNTTHAIFTIARKEGLKGLYAGFPAG 73
+ G TF PLDV++TR QV +L + + + ++ I KEGL+G+Y G
Sbjct: 344 SAGVIAATFVCPLDVIKTRFQVGVPQLANGTVKGSVIVASLQQIFHKEGLRGMYRGLAPT 523
Query: 74 LLGATISWSLLVFYYGIVK-------DRHARS----KVEKSGALMTVCLCANPAFVVKTR 122
+L +W++ Y +K + H S V +GA L NP +VVKTR
Sbjct: 524 VLALLPNWAVYFTMYEQLKSLLHSDDESHHLSVGSNMVAAAGAGAATTLFTNPLWVVKTR 703
Query: 123 LQLQTPLHHARPYSGLYDAFRTIKREEGFSAFYRGIVPGFFLISQAAIQFIVYEQLRKTV 182
LQ Q PY A R I EEG Y G+VP IS AIQF +YE ++ +
Sbjct: 704 LQTQGMRSGVVPYRSTLSALRRIASEEGIRGLYSGLVPALAGISHVAIQFPMYETIKFYL 883
Query: 183 VN 184
N
Sbjct: 884 AN 889
Score = 62.4 bits (150), Expect = 2e-10
Identities = 55/165 (33%), Positives = 78/165 (46%), Gaps = 17/165 (10%)
Frame = +2
Query: 10 VASLTTGFAFITFQYPLDVVQTRLQVHDGRLFSQYPRYNNTTHAIFTIARKEGLKGLYAG 69
VA+ G A F PL VV+TRLQ R S Y +T A+ IA +EG++GLY+G
Sbjct: 635 VAAAGAGAATTLFTNPLWVVKTRLQTQGMR--SGVVPYRSTLSALRRIASEEGIRGLYSG 808
Query: 70 FPAGLLGATI------SWSLLVFYYGIVKDRHARSKVEKSGALMTVCLCAN--------- 114
L G + + + FY D + V+K GA V + ++
Sbjct: 809 LVPALAGISHVAIQFPMYETIKFYLANQDD----AAVDKLGA-RDVAIASSVSKIFASTL 973
Query: 115 --PAFVVKTRLQLQTPLHHARPYSGLYDAFRTIKREEGFSAFYRG 157
P VV++RLQ Q H + YSG+ D R + ++EG FYRG
Sbjct: 974 TYPHEVVRSRLQEQGH-HSEKRYSGMIDCIRKVFQQEGVPGFYRG 1105
>TC86166 similar to PIR|T01729|T01729 mitochondrial solute carrier protein
homolog - Arabidopsis thaliana, partial (98%)
Length = 1789
Score = 67.4 bits (163), Expect = 5e-12
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 30/199 (15%)
Frame = +3
Query: 11 ASLTTGFAFITFQYPLDVVQTRLQVHDGRLFSQYPRYNNTTHAIFTIARKEGLKGLYAGF 70
A G ++ YP+D+V+ R+ V + S Y +Y HA+ T+ R+EG + LY G+
Sbjct: 777 AGACAGIIAMSATYPMDMVRGRITVQTEK--SPY-QYRGMFHALSTVLREEGPRALYKGW 947
Query: 71 PAGLLGATISWSLLVFYYGIVKDRHARSK----VEKSGALMTVCLC------------AN 114
++G L Y +KD ++K + S +T L A
Sbjct: 948 LPSVIGVIPYVGLNFAVYESLKDYLIKTKPFGLAQDSELSVTTRLACGAAAGTIGQTVAY 1127
Query: 115 PAFVVKTRLQLQTPLHHARP-------------YSGLYDAFRTIKREEGFSAFYRGIVPG 161
P V++ R+Q+ T H+A Y+G+ DAFR R EGF A Y+G+VP
Sbjct: 1128PLDVIRRRMQM-TGWHNAASVITGDGVGKVPLEYTGMVDAFRKTVRHEGFGALYKGLVPN 1304
Query: 162 FF-LISQAAIQFIVYEQLR 179
++ A+ F+ YE ++
Sbjct: 1305SVKVVPSIALAFVSYEMVK 1361
Score = 36.2 bits (82), Expect = 0.012
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 119 VKTRLQLQTPLHHARPYSGLYDAFRTIKREEGFSAFYRGIVPGFF-LISQAAIQFIVYEQ 177
+K LQ+Q P H YSG + I R EGF ++G ++ +A++F YEQ
Sbjct: 522 MKILLQVQNP--HNIKYSGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQ 695
Query: 178 LRKTVVNL 185
K +++L
Sbjct: 696 ASKGILHL 719
>TC93463 similar to GP|15145367|gb|AAB54239.2 Hypothetical protein K07B1.3
{Caenorhabditis elegans}, partial (5%)
Length = 754
Score = 62.8 bits (151), Expect = 1e-10
Identities = 45/168 (26%), Positives = 74/168 (43%), Gaps = 14/168 (8%)
Frame = +3
Query: 19 FITFQYPLDVVQTRLQVH---DGRLFSQYPRYNNTTHAIFTIARKEGLKGLYAGFPAGLL 75
FIT YPLD+ +TRLQV D ++ Y++T A + I EG+ GLYAG PAGL+
Sbjct: 243 FIT--YPLDITKTRLQVQSKSDSSKIAKNEYYHSTKDAFYKIIASEGIFGLYAGLPAGLI 416
Query: 76 GATISWSLLVFYYGIVKDRHARSKVEKSGALMTVCLC-----------ANPAFVVKTRLQ 124
G + ++Y +++ + + S + T + P V+ TR Q
Sbjct: 417 GVASTNFAYFYWYSLIRSYYQKRSSSTSFSTTTELILGAFVGALAQIFTMPVSVITTRQQ 596
Query: 125 LQTPLHHARPYSGLYDAFRTIKREEGFSAFYRGIVPGFFLISQAAIQF 172
++ L + I E+G + ++G+ P L I +
Sbjct: 597 AT----KSQDRKDLIGTTKEIISEDGITGLWKGLKPSLVLCVNPGITY 728
>TC81297 similar to GP|9758252|dbj|BAB08751.1 calcium-binding
transporter-like protein {Arabidopsis thaliana}, partial
(26%)
Length = 636
Score = 62.8 bits (151), Expect = 1e-10
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 13/136 (9%)
Frame = +1
Query: 60 KEGLKGLYAGFPAGLLGATISWSLLVFYYGIVKDRHARSKVEKS--GALMTV-------- 109
+EG + Y G ++G + + +Y +KD + + S G L+ +
Sbjct: 31 QEGPRAFYRGLLPSVIGMIPYAGIDLAFYDTLKDMSKKYIIHDSDPGPLVQLGCGTISGT 210
Query: 110 --CLCANPAFVVKTRLQLQTPLHHARPYSGLYDAFRTIKREEGFSAFYRGIVPGFF-LIS 166
C P V++TRLQ Q PL+ + Y G++DAF + EGF FY+G++P ++
Sbjct: 211 LGATCVYPLQVIRTRLQAQ-PLNSSDAYKGMFDAFCRTFQHEGFRGFYKGLLPNLLKVVP 387
Query: 167 QAAIQFIVYEQLRKTV 182
A+I ++VYE ++K +
Sbjct: 388 AASITYMVYESMKKNL 435
Score = 31.2 bits (69), Expect = 0.39
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = +1
Query: 21 TFQYPLDVVQTRLQVHDGRLFSQYPRYNNTTHAIFTIARKEGLKGLYAGFPAGLLGATIS 80
T YPL V++TRLQ + Y A + EG +G Y G LL +
Sbjct: 220 TCVYPLQVIRTRLQAQP---LNSSDAYKGMFDAFCRTFQHEGFRGFYKGLLPNLLKVVPA 390
Query: 81 WSLLVFYYGIVK 92
S+ Y +K
Sbjct: 391 ASITYMVYESMK 426
>TC81666 similar to PIR|T07793|T07793 uncoupling protein (clone StUCP7)
mitochonrial - potato, partial (85%)
Length = 911
Score = 62.4 bits (150), Expect = 2e-10
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Frame = +3
Query: 25 PLDVVQTRLQVHDGRL---FSQYPRYNNTTHAIFTIARKEGLKGLYAGFPAGLLGATISW 81
PLD + RLQ+ + S P+Y + TIAR+EGL L+ G GL +
Sbjct: 204 PLDTAKVRLQLQKQAVAGDVSSLPKYKGMLGTVGTIAREEGLSALWKGIVPGLHRQCLYG 383
Query: 82 SLLVFYYGIVKDRHARS----KVEKSGALM-------TVCLCANPAFVVKTRLQLQTPLH 130
L + Y VK + S V S ++ + ANP +VK RLQ + L
Sbjct: 384 GLRIGLYEPVKTFYTGSDHVGDVPLSKKILAAFTTGAVAIMVANPTDLVKVRLQAEGKLP 563
Query: 131 HARP--YSGLYDAFRTIKREEGFSAFYRGIVPGFF---LISQAAIQFIVYEQLRKTVVNL 185
P YSG +A+ +I R+EG A + G+ P +I+ A + Y+Q+++T++ +
Sbjct: 564 PGVPRRYSGSLNAYSSIVRQEGVRALWTGLGPNIARNGIIN--AAELASYDQVKQTILKI 737
Score = 40.4 bits (93), Expect = 6e-04
Identities = 23/56 (41%), Positives = 28/56 (49%), Gaps = 5/56 (8%)
Frame = +3
Query: 111 LCANPAFVVKTRLQLQTP-----LHHARPYSGLYDAFRTIKREEGFSAFYRGIVPG 161
+C P K RLQLQ + Y G+ TI REEG SA ++GIVPG
Sbjct: 192 VCTIPLDTAKVRLQLQKQAVAGDVSSLPKYKGMLGTVGTIAREEGLSALWKGIVPG 359
Score = 39.3 bits (90), Expect = 0.001
Identities = 23/61 (37%), Positives = 37/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 10 VASLTTGFAFITFQYPLDVVQTRLQVHDGRLFSQYP-RYNNTTHAIFTIARKEGLKGLYA 68
+A+ TTG I P D+V+ RLQ +G+L P RY+ + +A +I R+EG++ L+
Sbjct: 471 LAAFTTGAVAIMVANPTDLVKVRLQA-EGKLPPGVPRRYSGSLNAYSSIVRQEGVRALWT 647
Query: 69 G 69
G
Sbjct: 648 G 650
>CA919248 similar to PIR|B96830|B96 hypothetical protein F19K16.14 [imported]
- Arabidopsis thaliana, partial (55%)
Length = 681
Score = 57.8 bits (138), Expect = 4e-09
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Frame = -3
Query: 25 PLDVVQTRLQVHDGRLFSQYPRYNNTT--HAIFTIARKEGLKGLYAGFPAGLLGATISWS 82
P+++++ RLQ+ + + + + TT I RKEGL+G+Y G ++ S
Sbjct: 622 PVELIKIRLQLQN----TNQSKESGTTPVKVAKNIWRKEGLRGIYRGLGITIMRDIPSHG 455
Query: 83 LLVFYYGIVKDR----------HARSKVEKSGALMTVC--LCANPAFVVKTRLQLQTPLH 130
+ Y ++++ + + + SG L V +C+ P VVKTRLQ QTP
Sbjct: 454 FYFWTYEYMREKLHPGCRKSGQESLNTMLVSGGLAGVASWVCSYPFDVVKTRLQAQTP-- 281
Query: 131 HARPYSGLYDAFRTIKREEGFSAFYRGI---VPGFFLISQAAIQFIVYE 176
A Y G+YD REEG+ +RG+ V F+++ A F YE
Sbjct: 280 SAIKYKGVYDCITKSVREEGYPVLWRGLGTAVARAFVVNGAV--FAAYE 140
Score = 27.3 bits (59), Expect = 5.7
Identities = 19/64 (29%), Positives = 25/64 (38%)
Frame = -3
Query: 16 GFAFITFQYPLDVVQTRLQVHDGRLFSQYPRYNNTTHAIFTIARKEGLKGLYAGFPAGLL 75
G A YP DVV+TRLQ +Y I R+EG L+ G +
Sbjct: 349 GVASWVCSYPFDVVKTRLQAQTPSAI----KYKGVYDCITKSVREEGYPVLWRGLGTAVA 182
Query: 76 GATI 79
A +
Sbjct: 181 RAFV 170
>TC85867 similar to PIR|D84613|D84613 hypothetical protein At2g22500
[imported] - Arabidopsis thaliana, partial (91%)
Length = 1510
Score = 57.0 bits (136), Expect = 7e-09
Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 16/186 (8%)
Frame = +1
Query: 11 ASLTTGFAFITFQYPLDVVQTRLQVHDGRLF-SQYPRYNNTTHAIFTIARKEGLKGLYAG 69
A L G P DV R+Q DGRL +Q Y + AI +A++EG+ L+ G
Sbjct: 694 AGLIAGGVGAAIGNPADVAMVRMQA-DGRLPPAQQRNYKSVVDAITRMAKQEGVTSLWRG 870
Query: 70 ----------FPAGLLGATISWSLLVFYYGIVKDRHARSKVEKSGALMTVCLCANPAFVV 119
A L + + ++ G+++D A + +NP V+
Sbjct: 871 SSLTVNRAMLVTASQLASYDQFKEMILEKGVMRDGLGTHVTASFAAGFVAAVASNPVDVI 1050
Query: 120 KTR-LQLQTPLHHARPYSGLYDAFRTIKREEGFSAFYRGIVPGFFLISQ----AAIQFIV 174
KTR + ++ PY+G D R EG A Y+G +P IS+ + F+
Sbjct: 1051KTRVMNMKVEAGKEPPYAGALDCALKTVRAEGPMALYKGFIP---TISRQGPFTVVLFVT 1221
Query: 175 YEQLRK 180
EQ+RK
Sbjct: 1222LEQVRK 1239
>TC79679 similar to GP|18377839|gb|AAL67106.1 AT5g01500/F7A7_20 {Arabidopsis
thaliana}, partial (61%)
Length = 1003
Score = 55.8 bits (133), Expect = 1e-08
Identities = 47/181 (25%), Positives = 84/181 (45%), Gaps = 9/181 (4%)
Frame = +3
Query: 11 ASLTTGFAFITFQYPLDVVQTRLQVHDGRLFSQYPRYN-NTTHAIFTIARKEGLKGLYAG 69
A G A TF PLD ++ +Q H R+ + + + AI I ++EG++G + G
Sbjct: 321 AGAFAGAAAKTFTAPLDRIKLLMQTHGVRVGQESAKKAISFVEAITVIGKEEGIRGYWKG 500
Query: 70 FPAGLLGATISWSLLVFYYGIVKDRHARSKVEKSGALMTVCLCANPAFVVKTRLQLQTPL 129
++ ++ +F Y + K + ++G L V + AF T + PL
Sbjct: 501 NLPQVIRVIPYSAVQLFAYELYK----KLFTGQNGELSVVARLSAGAFAGMTSTFITYPL 668
Query: 130 HHARPYSGLYDAFRTIK-------REEGFSAFYRGIVPGFFLIS-QAAIQFIVYEQLRKT 181
R + +RT+ REEGF++FY+G+ P I+ A+ F V++ L+K+
Sbjct: 669 DVLRLRLAVEPGYRTMSEVALCMLREEGFASFYKGLGPSLIAIAPYIAVNFCVFDLLKKS 848
Query: 182 V 182
+
Sbjct: 849 L 851
>TC79488 similar to PIR|F84823|F84823 probable peroxisomal membrane carrier
protein [imported] - Arabidopsis thaliana, partial (62%)
Length = 872
Score = 55.1 bits (131), Expect = 3e-08
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 43/198 (21%)
Frame = +2
Query: 24 YPLDVVQTRLQVHDGRLFSQYPRYNNTTHAIFT----IARKEGLKGLYAGFPAGLLGATI 79
YPL V TR Q + P+ N F + ++EG + LY G L+G
Sbjct: 215 YPLQTVNTRQQT------DRDPKKGNKNLGTFQQMCQVVKQEGWERLYGGLAPSLVGTAT 376
Query: 80 SWSLLVFYYGIVKDRHARSKVEK----SG------------ALMTVC---LCANPAFVVK 120
S + ++Y I ++R + +E SG A ++ C L NP ++V
Sbjct: 377 SQGVYYYFYQIFRNRAEAAALENMRLGSGDGSVGMFSSLIVAALSGCVNVLLTNPIWLVV 556
Query: 121 TRLQL-------------------QTPLHHARPYS-GLYDAFRTIKREEGFSAFYRGIVP 160
TR+Q QT L P + G + + E G F++G++P
Sbjct: 557 TRMQTHRKESRKTLPDPRLSGAIEQTSLSTVEPLAYGTSHVIQEVYDEAGVLGFWKGVLP 736
Query: 161 GFFLISQAAIQFIVYEQL 178
++S +IQF++YE L
Sbjct: 737 TLVMVSNPSIQFMLYETL 790
>TC88157 similar to PIR|F84823|F84823 probable peroxisomal membrane carrier
protein [imported] - Arabidopsis thaliana, partial (64%)
Length = 1293
Score = 54.3 bits (129), Expect = 4e-08
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Frame = +3
Query: 39 RLFSQYPRYNNTTHAIFTIARKEGLKGLYAGFPAGLLGATISWSLLVFYYGIVKDRHARS 98
+L S P+ T HA + + G+ G + G L+ + Y +K A+
Sbjct: 603 KLNSTKPKPFGTIHAANEVYNEAGIVGFWKGVIPALIMVCNPSIQFMIYESSLKHLRAKR 782
Query: 99 KVEKSG---------------ALMTVCLCANPAFVVKTRLQLQTPL--HHARPYSGLYDA 141
+K G A + + P VVK+RLQ + + +++ YSG +DA
Sbjct: 783 SAKKQGDTSVTALEVFLVGAIAKLGATVTTYPLLVVKSRLQAKQEIGGNNSLRYSGTFDA 962
Query: 142 FRTIKREEGFSAFYRG----IVPGFFLISQAAIQFIVYEQLRKTVVNLKTKGSKI 192
+ R EGF FY+G IV F A++ F+V E+L K + + K K+
Sbjct: 963 ILKMIRYEGFPGFYKGMSTKIVQSVF---AASVLFMVKEELVKAITVIANKSKKV 1118
Score = 52.4 bits (124), Expect = 2e-07
Identities = 51/223 (22%), Positives = 77/223 (33%), Gaps = 66/223 (29%)
Frame = +3
Query: 24 YPLDVVQTRLQVHDGRLFSQYPRYNNTTHA-------------IFTIARKEGLKGLYAGF 70
YPL V TR Q ++ +NT IF + EG GLY+G
Sbjct: 96 YPLQTVNTRQQTERTLKRNKQSSSSNTITTASSSSSSSGIFLQIFQVIGNEGWGGLYSGL 275
Query: 71 PAGLLGATISWSLLVFYYGIVKDR------------HARSKVEKSGALMTVC-------L 111
LLG S + F+Y + K++ H V G L+ L
Sbjct: 276 KPSLLGTAASQGIYYFFYQVFKNKAVAIAAARKVKGHGDGTVGMFGWLIVAAIAGSLNVL 455
Query: 112 CANPAFVVKTRLQLQT---------------------------------PLHHARPYS-G 137
NP +V+ TR+Q T L+ +P G
Sbjct: 456 FTNPIWVLVTRMQTHTQAERKILEEKKEALRKAASESSLAGSTLEEKLEKLNSTKPKPFG 635
Query: 138 LYDAFRTIKREEGFSAFYRGIVPGFFLISQAAIQFIVYEQLRK 180
A + E G F++G++P ++ +IQF++YE K
Sbjct: 636 TIHAANEVYNEAGIVGFWKGVIPALIMVCNPSIQFMIYESSLK 764
>TC80182 similar to GP|10177187|dbj|BAB10321. mitochondrial carrier
protein-like {Arabidopsis thaliana}, partial (88%)
Length = 1293
Score = 53.5 bits (127), Expect = 7e-08
Identities = 47/195 (24%), Positives = 80/195 (40%), Gaps = 28/195 (14%)
Frame = +1
Query: 10 VASLTTGFAFITFQYPLDVVQTRLQVHDGRLFSQYPRYNNTTHAIFTIARKEGLKGLYAG 69
V+ G A YP D+++T L + Y N A I + G +GLY+G
Sbjct: 445 VSGAVAGCAATVGSYPFDLLRTILASQ-----GEPKVYPNMRSASIDILQTRGFRGLYSG 609
Query: 70 FPAGLLGA-----------------TISWSLLVFYYGIVKDRHARSKVEKSGALMTVC-- 110
L+ T++W+ + + ++ + ++ G C
Sbjct: 610 LSPTLVEIIPYAGLQFGTYDTFKRWTMAWNQVQYSNTAAEESISSFQLFLCGLAAGTCAK 789
Query: 111 LCANPAFVVKTRLQLQTPLHHAR--------PYSGLYDAFRTIKREEGFSAFYRGIVPGF 162
L +P VVK R Q++ H R Y ++DA + I ++EG++ Y+GIVP
Sbjct: 790 LVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYRNMFDALKRILQKEGWAGLYKGIVPST 969
Query: 163 FLISQA-AIQFIVYE 176
+ A A+ F+ YE
Sbjct: 970 VKAAPAGAVTFVAYE 1014
Score = 43.9 bits (102), Expect = 6e-05
Identities = 29/78 (37%), Positives = 43/78 (54%), Gaps = 12/78 (15%)
Frame = +1
Query: 114 NPAFVVKTRLQLQ-------TPLHH--ARP--YSGLYDAFRTIKREEGFSAFYRGIVPGF 162
+P V+K R Q+Q T LH ++P Y+G++ A + I REEG F+RG VP
Sbjct: 148 SPLDVIKIRFQVQLEPTSLWTSLHRDLSKPSKYTGMFQATKDIFREEGIRGFWRGNVPAL 327
Query: 163 FLI-SQAAIQFIVYEQLR 179
++ AIQF V +L+
Sbjct: 328 LMVMPYTAIQFTVLHKLK 381
Score = 33.5 bits (75), Expect = 0.079
Identities = 22/76 (28%), Positives = 34/76 (43%), Gaps = 6/76 (7%)
Frame = +1
Query: 24 YPLDVVQTRLQVHDGRLFSQYPR------YNNTTHAIFTIARKEGLKGLYAGFPAGLLGA 77
+PLDVV+ R Q+ + +Y Y N A+ I +KEG GLY G + A
Sbjct: 799 HPLDVVKKRFQIEGLQRHPRYGARVEHRAYRNMFDALKRILQKEGWAGLYKGIVPSTVKA 978
Query: 78 TISWSLLVFYYGIVKD 93
+ ++ Y + D
Sbjct: 979 APAGAVTFVAYELTSD 1026
>BG644388 similar to GP|19310699|gb putative mitochondrial carrier protein
{Arabidopsis thaliana}, partial (60%)
Length = 623
Score = 37.0 bits (84), Expect(2) = 7e-07
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 118 VVKTRLQLQTPLHHARPYSGLYDAFRTIKREEGFSAFYRGIVPGFFLISQA---AIQFIV 174
V+K R+Q R ++ DA R I +EGF Y G G FL+ AIQF +
Sbjct: 397 VIKQRMQ-------TRQFASAPDAVRLIVSKEGFKGLYAGY--GSFLLRDLPFDAIQFCI 549
Query: 175 YEQLR 179
YEQ+R
Sbjct: 550 YEQMR 564
Score = 32.7 bits (73), Expect(2) = 7e-07
Identities = 25/89 (28%), Positives = 36/89 (40%)
Frame = +2
Query: 6 WEYPVASLTTGFAFITFQYPLDVVQTRLQVHDGRLFSQYPRYNNTTHAIFTIARKEGLKG 65
+E +A T G T YP+D ++TRLQV G + LKG
Sbjct: 89 FEGVIAGGTAGVVVETALYPIDTIKTRLQVARG-------------------GGQIALKG 211
Query: 66 LYAGFPAGLLGATISWSLLVFYYGIVKDR 94
LY+G L G + ++ V Y K +
Sbjct: 212 LYSGLLGNLAGVLPASAIFVGVYEPAKQK 298
Score = 29.6 bits (65), Expect = 1.1
Identities = 19/49 (38%), Positives = 27/49 (54%)
Frame = +1
Query: 27 DVVQTRLQVHDGRLFSQYPRYNNTTHAIFTIARKEGLKGLYAGFPAGLL 75
+V++ R+Q R F+ P A+ I KEG KGLYAG+ + LL
Sbjct: 394 EVIKQRMQT---RQFASAP------DAVRLIVSKEGFKGLYAGYGSFLL 513
>BF636076 similar to GP|3068714|gb| unknown {Arabidopsis thaliana}, partial
(55%)
Length = 673
Score = 47.8 bits (112), Expect = 4e-06
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 9/182 (4%)
Frame = +3
Query: 10 VASLTTGFAFITFQYPLDVVQTRLQVHDGRLFSQYPRYN-NTTHAIFTIARKEGLKGLYA 68
+A G A T PLD ++ +Q H R+ + + AI I ++EG++G +
Sbjct: 108 LAGAVAGAAAKTVTAPLDRIKLLMQTHGVRIRQESAKKTIGFIEAISMIGKEEGIRGYWK 287
Query: 69 GFPAGLLGATISWSLLVFYYGIVKDRHARSKVEKSGALMTVCLCANPAFVVKTRLQLQTP 128
G ++ ++ +F Y I K + K+ L V A AF T + P
Sbjct: 288 GNLPQVIRVIPYSAVQLFAYEIYK----KIFKGKNDELSVVGRLAAGAFAGMTSTFVTYP 455
Query: 129 LHHARPYSGLYDAFRTIK-------REEGFSAFYRGIVPGFFLIS-QAAIQFIVYEQLRK 180
L R + RT+ REEGF++FY G+ P I+ A+ F V++ L+K
Sbjct: 456 LDVLRLRLAVEPGCRTMTEVALSMVREEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKK 635
Query: 181 TV 182
++
Sbjct: 636 SL 641
>TC86125 similar to PIR|T04608|T04608 ADP ATP carrier protein F20O9.60 -
Arabidopsis thaliana, partial (81%)
Length = 1640
Score = 47.4 bits (111), Expect = 5e-06
Identities = 28/93 (30%), Positives = 45/93 (48%)
Frame = +3
Query: 24 YPLDVVQTRLQVHDGRLFSQYPRYNNTTHAIFTIARKEGLKGLYAGFPAGLLGATISWSL 83
YP+D V+ R+ + G + +YN++ HA TI KEG K L+ G A +L A +
Sbjct: 1098 YPIDTVRRRMMMTSG----ESVKYNSSLHAFQTIVAKEGTKSLFKGAGANILRAVAGAGV 1265
Query: 84 LVFYYGIVKDRHARSKVEKSGALMTVCLCANPA 116
L Y + + G +MT+ + NP+
Sbjct: 1266 LAGYDKLQLVLFGKKYGSGGG*IMTIIITRNPS 1364
Score = 26.6 bits (57), Expect = 9.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 132 ARPYSGLYDAFRTIKREEGFSAFYRG 157
+ PY G+ D F ++EG A +RG
Sbjct: 549 SEPYKGIGDCFARTMKDEGVIALWRG 626
>AW267865 similar to GP|13992452|em carnitine acyl carrier-like protein
{Arabidopsis thaliana}, partial (58%)
Length = 603
Score = 45.8 bits (107), Expect = 2e-05
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 17/162 (10%)
Frame = +1
Query: 16 GFAFITFQYPLDVVQTRLQVHDGRLFSQYPRYNNTTHAIFTIARKEGLKGLYAGFPAGLL 75
G A + +P D ++ +LQ L Q P+Y+ A+ EG GLY G A L
Sbjct: 88 GAAQLIVGHPFDTIKVKLQSQPTPLPGQVPKYSGAIDAVKKTIAAEGPGGLYKGMGAPLA 267
Query: 76 GATISWSLLVFYYG----IVKDRHA------RSKVEKSGALMTVCLCANPAFVVKTRLQL 125
++L G ++K + V + A ++V A P ++K RLQ
Sbjct: 268 TVAAFNAVLFTVRGQMEALLKSHPGDVLTINQQLVCGAAAGLSVSFLACPTELIKCRLQA 447
Query: 126 QTPLHH------ARPYSGLYDAFR-TIKREEGFSAFYRGIVP 160
Q+ L A Y G D R +K E G ++G+VP
Sbjct: 448 QSALAGSGTATLAVKYGGPMDVARHVLKSEGGVKGLFKGLVP 573
>TC79872 similar to GP|22002462|dbj|BAC06495. mitochondrial uncoupling
protein {Helicodiceros muscivorus}, partial (46%)
Length = 861
Score = 44.3 bits (103), Expect = 4e-05
Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Frame = +1
Query: 46 RYNNTTHAIFTIARKEGLKGLYAGFPAGLLGATISWSLLVFYYGIVK----------DRH 95
RY+ A TI R+EGL L+ G + I + + Y VK D
Sbjct: 1 RYSGAMDAYSTILRQEGLGALWTGLGPNIARNAIINAAELASYDRVKQTILKIPGFMDNA 180
Query: 96 ARSKVEKSGALMTVCLCANPAFVVKTRLQLQTPLHHARPYSGLYDAFRTIKREEGFSAFY 155
+ GA + +P VVK+R+ + Y +D F EGF AFY
Sbjct: 181 FTHLLAGLGAGLFAVFIGSPVDVVKSRMMGDSS------YKNTFDCFLKTLFNEGFLAFY 342
Query: 156 RGIVPGFFLIS-QAAIQFIVYEQLRK 180
+G +P F + I F+ EQ ++
Sbjct: 343 KGFLPNFGRVGVWNVIMFLTLEQAKR 420
Score = 33.9 bits (76), Expect = 0.061
Identities = 18/55 (32%), Positives = 33/55 (59%), Gaps = 4/55 (7%)
Frame = +1
Query: 135 YSGLYDAFRTIKREEGFSAFYRGIVPGFFLISQAAI----QFIVYEQLRKTVVNL 185
YSG DA+ TI R+EG A + G+ P I++ AI + Y+++++T++ +
Sbjct: 4 YSGAMDAYSTILRQEGLGALWTGLGPN---IARNAIINAAELASYDRVKQTILKI 159
>BI271317 similar to GP|11067279|gb unknown protein {Arabidopsis thaliana},
partial (36%)
Length = 596
Score = 43.1 bits (100), Expect = 1e-04
Identities = 22/58 (37%), Positives = 29/58 (49%)
Frame = +3
Query: 122 RLQLQTPLHHARPYSGLYDAFRTIKREEGFSAFYRGIVPGFFLISQAAIQFIVYEQLR 179
RLQ Q + PY + A I EEG Y GI+P +S AIQF YE+++
Sbjct: 3 RLQTQGMRPNVVPYKSVLSALTRITHEEGLRGLYSGILPSLAGVSHVAIQFPAYEKIK 176
Score = 34.3 bits (77), Expect = 0.046
Identities = 34/129 (26%), Positives = 57/129 (43%), Gaps = 16/129 (12%)
Frame = +3
Query: 47 YNNTTHAIFTIARKEGLKGLYAGFPAGLLGATISWSLLVF-------YYGIVKDRHARSK 99
Y + A+ I +EGL+GLY+G L G +S + F Y KD K
Sbjct: 42 YKSVLSALTRITHEEGLRGLYSGILPSLAG--VSHVAIQFPAYEKIKLYMAKKDNTTVDK 215
Query: 100 -------VEKSGALMTVCLCANPAFVVKTRLQLQTPLHHAR--PYSGLYDAFRTIKREEG 150
+ S + +T + P V+++RLQ Q ++ Y+G+ D + + ++EG
Sbjct: 216 LNPGSVAIASSISKVTASVMTYPHEVIRSRLQEQGQAKNSSGVQYAGVIDCTKKVFQKEG 395
Query: 151 FSAFYRGIV 159
RGI+
Sbjct: 396 I----RGIL 410
>TC79436 similar to GP|18252183|gb|AAL61924.1 putative mitochondrial carrier
protein {Arabidopsis thaliana}, partial (77%)
Length = 1021
Score = 43.1 bits (100), Expect = 1e-04
Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 19/193 (9%)
Frame = +3
Query: 24 YPLDVVQTRLQVHDGRLFSQYPRYNNTTHAIFTIARKEGLKGLYAGFPAGLLGATISWSL 83
YP+ VV+TRLQV ++ N + + +G+ GLY GF + GA + +
Sbjct: 267 YPVSVVKTRLQVA-----TKGAAERNAYSVAKGLLKTDGIPGLYRGFGTVIFGAIPTRII 431
Query: 84 LVFYYGIVK------------DRHARSKVEKSGALMTVCLCANPAFV----VKTRLQLQT 127
+ K ++ + A MT L A FV V +L +Q
Sbjct: 432 FLSVLETTKVSAFKMLQPFGLSETTQAALANGVAGMTSSLFAQSVFVPIDVVSQKLMVQG 611
Query: 128 PLHHARPYSGLYDAFRTIKREEGFSAFYRGIVPGFFLIS---QAAIQFIVYEQLRKTVVN 184
HA+ YSG D R I R +G YRG G +++ +A+ + Y ++ +
Sbjct: 612 YSGHAQ-YSGGIDVARKILRSDGIRGLYRGF--GLSVVTYSPSSAVWWASYGSSQRFIWR 782
Query: 185 LKTKGSKIQHQKP 197
+G K P
Sbjct: 783 HLDQGGKYDEASP 821
Score = 40.4 bits (93), Expect = 6e-04
Identities = 46/171 (26%), Positives = 74/171 (42%), Gaps = 23/171 (13%)
Frame = +3
Query: 10 VASLTTGFAFITFQYPLDVVQTRLQVHDGRLFSQYPRYNNTTHAIFTIARKEGLKGLYAG 69
VA +T+ + P+DVV +L V +S + +Y+ I R +G++GLY G
Sbjct: 528 VAGMTSSLFAQSVFVPIDVVSQKLMVQG---YSGHAQYSGGIDVARKILRSDGIRGLYRG 698
Query: 70 FPAGLLGATISWSLLVFY--YGIVKD---RH---------ARSKVEK------SGALM-- 107
F GL T S S V++ YG + RH A V+K +G ++
Sbjct: 699 F--GLSVVTYSPSSAVWWASYGSSQRFIWRHLDQGGKYDEASPSVQKIMLVQAAGGIIAG 872
Query: 108 -TVCLCANPAFVVKTRLQLQTPLHHARPYSGLYDAFRTIKREEGFSAFYRG 157
T P +KTRLQ+ + S + + + +E+G+ YRG
Sbjct: 873 ATASCITTPLDTIKTRLQVMGNDNR----SSIKQVAKDLIKEDGWKGLYRG 1013
Score = 28.5 bits (62), Expect = 2.5
Identities = 17/48 (35%), Positives = 26/48 (53%), Gaps = 2/48 (4%)
Frame = +3
Query: 25 PLDVVQTRLQV--HDGRLFSQYPRYNNTTHAIFTIARKEGLKGLYAGF 70
PLD ++TRLQV +D R ++ + +++G KGLY GF
Sbjct: 897 PLDTIKTRLQVMGNDNR--------SSIKQVAKDLIKEDGWKGLYRGF 1016
Score = 26.6 bits (57), Expect = 9.7
Identities = 17/55 (30%), Positives = 24/55 (42%)
Frame = +3
Query: 103 SGALMTVCLCANPAFVVKTRLQLQTPLHHARPYSGLYDAFRTIKREEGFSAFYRG 157
+G V + P VVKTRLQ+ T R Y + + + +G YRG
Sbjct: 234 AGLFTGVTVALYPVSVVKTRLQVATKGAAER---NAYSVAKGLLKTDGIPGLYRG 389
>BG644374 similar to GP|21536790|gb ADP/ATP translocase-like protein
{Arabidopsis thaliana}, partial (44%)
Length = 753
Score = 43.1 bits (100), Expect = 1e-04
Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 16/165 (9%)
Frame = +2
Query: 10 VASLTTGFAFITFQYPLDVVQTRLQVHDGR---LFSQYPRYNNTTHAIFTIARKEGLKGL 66
+A G A T P++ + LQ + L + R+ I + ++EG+ L
Sbjct: 257 MAGAVMGGAVHTIVAPIERAKLLLQTQESNIAILSGPHRRFKGMLDCIGSTVKEEGVLSL 436
Query: 67 YAGFPAGLL----GATISWSLLVFYYGIV----KDRH-----ARSKVEKSGALMTVCLCA 113
+ G + +L +++SL Y I+ +D H + + + S A T +
Sbjct: 437 WRGNGSSVLRYYPSVALNFSLKDLYRNILHSNFQDGHFLAGSSANFIAGSAAGCTTLIII 616
Query: 114 NPAFVVKTRLQLQTPLHHARPYSGLYDAFRTIKREEGFSAFYRGI 158
P + TRL + R + G+Y RTI ++G YRG+
Sbjct: 617 YPLDISHTRLAADLGRYETRQFRGIYHFLRTIHEKDGIRGIYRGL 751
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.327 0.143 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,056,346
Number of Sequences: 36976
Number of extensions: 108641
Number of successful extensions: 843
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of query: 250
length of database: 9,014,727
effective HSP length: 94
effective length of query: 156
effective length of database: 5,538,983
effective search space: 864081348
effective search space used: 864081348
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)
Medicago: description of AC125480.1