BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC125479.4 - phase: 0
(110 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BQ146076 similar to GP|5139541|emb| nodulin26-like major intrins... 117 5e-31
TC77955 similar to GP|5139541|emb|CAB45652.1 nodulin26-like majo... 110 8e-26
TC86110 multifunctional aquaporin [Medicago truncatula] 102 2e-23
TC93480 similar to PIR|B96840|B96840 hypothetical protein F23A5.... 100 7e-23
TC79264 similar to PIR|B96840|B96840 hypothetical protein F23A5.... 95 5e-21
TC93137 weakly similar to PIR|JQ2285|JQ2285 nodulin-26 - soybean... 95 5e-21
AJ499650 weakly similar to PIR|S01444|S014 nodulin-26 precursor ... 86 2e-18
TC77711 similar to PIR|T46160|T46160 caffeic acid O-methyltransf... 70 1e-13
TC79265 similar to PIR|B96840|B96840 hypothetical protein F23A5.... 70 2e-13
TC77005 similar to SP|P21653|TIP1_TOBAC Tonoplast intrinsic prot... 67 1e-12
TC77007 similar to PIR|T10804|T10804 tonoplast intrinsic protein... 67 1e-12
TC85305 aquaporin 56 2e-09
TC78780 similar to PIR|JQ1106|JQ1106 tonoplast intrinsic protein... 53 2e-08
TC77651 similar to PIR|JQ1106|JQ1106 tonoplast intrinsic protein... 53 2e-08
TC77008 similar to PIR|A84653|A84653 hypothetical protein At2g25... 52 3e-08
TC76601 aquaporin-like protein PIP2 [Medicago truncatula] 50 2e-07
TC85259 homologue to PIR|T09260|T09260 aquaporin-like transmembr... 48 5e-07
TC88670 similar to GP|535780|dbj|BAA05654.1| transmembrane prote... 48 5e-07
TC76539 aquaporin [Medicago truncatula] 47 9e-07
TC85260 homologue to GP|3158476|gb|AAC17529.1| aquaporin 2 {Sama... 47 1e-06
>BQ146076 similar to GP|5139541|emb| nodulin26-like major intrinsic protein
{Pisum sativum}, partial (14%)
Length = 369
Score = 117 bits (293), Expect(2) = 5e-31
Identities = 56/56 (100%), Positives = 56/56 (100%)
Frame = +1
Query: 55 SSYKGIWIYMVGPITGALLGAWSYVVIQETDHKQDLATSQSPLSVKIHNEMNGIEL 110
SSYKGIWIYMVGPITGALLGAWSYVVIQETDHKQDLATSQSPLSVKIHNEMNGIEL
Sbjct: 46 SSYKGIWIYMVGPITGALLGAWSYVVIQETDHKQDLATSQSPLSVKIHNEMNGIEL 213
Score = 31.6 bits (70), Expect(2) = 5e-31
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 41 SMNPARTLGPAIAT 54
SMNPARTLGPAIAT
Sbjct: 3 SMNPARTLGPAIAT 44
>TC77955 similar to GP|5139541|emb|CAB45652.1 nodulin26-like major intrinsic
protein {Pisum sativum}, partial (97%)
Length = 1272
Score = 110 bits (275), Expect = 8e-26
Identities = 51/85 (60%), Positives = 68/85 (80%)
Frame = +1
Query: 1 MVFISTAVATDSKATGELAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYKGI 60
++FI + VATD++A GELAG+AVGS+V + + AGPI+G SMNPAR++GPA+ S Y+GI
Sbjct: 643 LMFIISGVATDNRAIGELAGIAVGSTVLLNVMFAGPITGASMNPARSIGPALLHSEYRGI 822
Query: 61 WIYMVGPITGALLGAWSYVVIQETD 85
WIY+V PI GA+ GAW Y VI+ TD
Sbjct: 823 WIYLVSPILGAVAGAWVYNVIRYTD 897
Score = 26.9 bits (58), Expect = 1.2
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +1
Query: 5 STAVATDSKATGELAGVAV--GSSVTIASIVAGPISGGSMNPARTLGPAIATSSY--KGI 60
S V +++ L G+++ G +V + G ISG NPA T+ A +T + K +
Sbjct: 313 SVLVNKNNENVVTLPGISIVWGLAVMVLVYSLGHISGAHFNPAVTIAFA-STKRFPLKQV 489
Query: 61 WIYMVGPITGALLGAWSYVVIQETDHKQDLAT 92
Y+ + G+ L + + +I H Q + T
Sbjct: 490 PAYVAAQVFGSTLASGTLRLIFTGKHNQFVGT 585
>TC86110 multifunctional aquaporin [Medicago truncatula]
Length = 1411
Score = 102 bits (255), Expect = 2e-23
Identities = 43/85 (50%), Positives = 65/85 (75%)
Frame = +3
Query: 1 MVFISTAVATDSKATGELAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYKGI 60
++F + VATD++A GELAG+A+GS++ + ++AGP++G SMNP RTLGPA + Y+GI
Sbjct: 570 LMFTISGVATDTRAIGELAGIAIGSTLLLNVMIAGPVTGASMNPVRTLGPAFVHNEYRGI 749
Query: 61 WIYMVGPITGALLGAWSYVVIQETD 85
WIY++ PI GA+ GAW Y ++ T+
Sbjct: 750 WIYLLSPILGAIAGAWVYNTVRYTN 824
>TC93480 similar to PIR|B96840|B96840 hypothetical protein F23A5.11
[imported] - Arabidopsis thaliana, partial (78%)
Length = 902
Score = 100 bits (250), Expect = 7e-23
Identities = 44/72 (61%), Positives = 61/72 (84%)
Frame = +1
Query: 1 MVFISTAVATDSKATGELAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYKGI 60
++F+ TAVATD++A GELAG+AVG++V + ++AGPI+G SMNP RTLGPAIA ++YK I
Sbjct: 685 LMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPITGASMNPVRTLGPAIAANNYKAI 864
Query: 61 WIYMVGPITGAL 72
W+Y++ PI GAL
Sbjct: 865 WVYLLAPILGAL 900
Score = 27.7 bits (60), Expect = 0.70
Identities = 17/57 (29%), Positives = 30/57 (51%), Gaps = 1/57 (1%)
Frame = +3
Query: 22 AVGSSVTIASIVAGPISGGSMNPARTLG-PAIATSSYKGIWIYMVGPITGALLGAWS 77
+ G +V I + G ISG +NPA T+ A+ +K + +Y+ I ++ A+S
Sbjct: 414 STGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKHVPMYIGAQILASICAAFS 584
>TC79264 similar to PIR|B96840|B96840 hypothetical protein F23A5.11
[imported] - Arabidopsis thaliana, partial (82%)
Length = 861
Score = 94.7 bits (234), Expect = 5e-21
Identities = 43/74 (58%), Positives = 59/74 (79%)
Frame = +3
Query: 1 MVFISTAVATDSKATGELAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYKGI 60
++F TAVATD++A GELAG+AVG++V + ++AGP +G SMN RTL PAIA ++YKGI
Sbjct: 639 LMFAVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGASMNSVRTLRPAIAANNYKGI 818
Query: 61 WIYMVGPITGALLG 74
W+Y++ PI GAL G
Sbjct: 819 WLYLIAPILGALGG 860
Score = 25.0 bits (53), Expect = 4.6
Identities = 12/27 (44%), Positives = 16/27 (58%)
Frame = +2
Query: 22 AVGSSVTIASIVAGPISGGSMNPARTL 48
A G +V I + G ISG +NPA T+
Sbjct: 368 ATGLAVMIIILSTGHISGAHLNPAVTI 448
>TC93137 weakly similar to PIR|JQ2285|JQ2285 nodulin-26 - soybean, partial
(47%)
Length = 633
Score = 94.7 bits (234), Expect = 5e-21
Identities = 41/78 (52%), Positives = 59/78 (75%)
Frame = +2
Query: 1 MVFISTAVATDSKATGELAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYKGI 60
++F+ +AV TD +A + A +AVG ++T+ +AGP+SG SMNPAR++GPAI YKG+
Sbjct: 158 LMFVISAVTTDDRAVDDSASIAVGMTLTLNLFIAGPVSGASMNPARSIGPAIVIHIYKGL 337
Query: 61 WIYMVGPITGALLGAWSY 78
WIY+VGPI GA+ GA +Y
Sbjct: 338 WIYIVGPIIGAIAGALAY 391
>AJ499650 weakly similar to PIR|S01444|S014 nodulin-26 precursor - soybean,
partial (30%)
Length = 583
Score = 85.9 bits (211), Expect = 2e-18
Identities = 41/88 (46%), Positives = 57/88 (64%)
Frame = -2
Query: 1 MVFISTAVATDSKATGELAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYKGI 60
+V VATD + + +LAGVA+G SV I I+AGP + SMNPAR+LGPAI + +YK I
Sbjct: 462 LVLTICGVATDHRGSKDLAGVAIGISVLINIIIAGPTTRASMNPARSLGPAIVSGNYKNI 283
Query: 61 WIYMVGPITGALLGAWSYVVIQETDHKQ 88
W+Y++GP GA+ Y ++ T Q
Sbjct: 282 WVYIIGPTIGAVFATVLYTFLRVTKPAQ 199
>TC77711 similar to PIR|T46160|T46160 caffeic acid O-methyltransferase-like
protein - Arabidopsis thaliana, partial (86%)
Length = 2361
Score = 70.1 bits (170), Expect = 1e-13
Identities = 39/89 (43%), Positives = 50/89 (55%), Gaps = 3/89 (3%)
Frame = +2
Query: 1 MVFISTAVATDSK--ATGELAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYK 58
+V+ A A D K + G +A +A+G V + AGP SGGSMNPAR+ GPA+ + Y
Sbjct: 527 LVYTVYATAADPKKGSLGTIAPIAIGLIVGANILAAGPFSGGSMNPARSFGPAVLSGDYH 706
Query: 59 GIWIYMVGP-ITGALLGAWSYVVIQETDH 86
WIY VGP I G L G V +DH
Sbjct: 707 NNWIYWVGPLIGGGLAGVIYSYVFMPSDH 793
Score = 29.6 bits (65), Expect = 0.19
Identities = 27/95 (28%), Positives = 45/95 (46%), Gaps = 4/95 (4%)
Frame = +2
Query: 18 LAGVAV--GSSVTIASIVAGPISGGSMNPARTLGPAIA--TSSYKGIWIYMVGPITGALL 73
L VAV G ++ +A V ISGG +NPA T G AI + GI+ Y + + G+++
Sbjct: 236 LVAVAVCHGFALFVAVSVGANISGGHVNPAVTFGLAIGGQITILTGIF-YWIAQLLGSIV 412
Query: 74 GAWSYVVIQETDHKQDLATSQSPLSVKIHNEMNGI 108
+ L + L++ IH+ +G+
Sbjct: 413 ACFL------------LKYATGGLTIPIHSVASGV 481
>TC79265 similar to PIR|B96840|B96840 hypothetical protein F23A5.11
[imported] - Arabidopsis thaliana, partial (16%)
Length = 612
Score = 69.7 bits (169), Expect = 2e-13
Identities = 33/71 (46%), Positives = 47/71 (65%), Gaps = 2/71 (2%)
Frame = +2
Query: 32 IVAGPISGGSMNPARTLGPAIATSSYKGIWIYMVGPITGALLGAWSYVVIQETDHK--QD 89
I P +G SMNP RTLGPAIA ++YKGIW+Y++ PI GAL GA +Y ++ D + +
Sbjct: 143 IYCRPATGASMNPVRTLGPAIAANNYKGIWLYLIAPILGALGGAGAYTAVKLPDEEFNSE 322
Query: 90 LATSQSPLSVK 100
+ S +P S +
Sbjct: 323 VKASSAPGSFR 355
>TC77005 similar to SP|P21653|TIP1_TOBAC Tonoplast intrinsic protein
root-specific RB7-5A (RT-TIP). [Common tobacco]
{Nicotiana tabacum}, partial (97%)
Length = 1055
Score = 67.0 bits (162), Expect = 1e-12
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +1
Query: 1 MVFISTAVATDSK--ATGELAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYK 58
+V+ A A D K + G +A +A+G V + AGP SGGSMNPAR+ GPA+ + ++
Sbjct: 565 LVYTVYATAADPKKGSIGTIAPIAIGFVVGANILAAGPFSGGSMNPARSFGPAVVSGNFA 744
Query: 59 GIWIYMVGPITGALLGAWSY 78
WIY VGP+ G L Y
Sbjct: 745 DNWIYWVGPLIGGGLAGLIY 804
Score = 27.7 bits (60), Expect = 0.70
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +1
Query: 21 VAVGSSVTIASIVAGPISGGSMNPARTLGPAIA--TSSYKGI--WI-YMVGPITGALL 73
VA ++ + +A ISGG +NPA T G AI + G+ WI ++G I +LL
Sbjct: 292 VAHAFALFVGVAIAANISGGHLNPAVTFGLAIGGNITILTGLFYWIAQLLGSIVASLL 465
>TC77007 similar to PIR|T10804|T10804 tonoplast intrinsic protein delta
type - upland cotton, complete
Length = 1041
Score = 67.0 bits (162), Expect = 1e-12
Identities = 36/89 (40%), Positives = 50/89 (55%), Gaps = 3/89 (3%)
Frame = +2
Query: 1 MVFISTAVATDSK--ATGELAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYK 58
+V+ A A D K + G +A +A+G V + AGP SGGSMNPAR+ GPA+ + ++
Sbjct: 533 LVYTVYATAADPKKGSIGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGNFH 712
Query: 59 GIWIYMVGPITGALLGAWSY-VVIQETDH 86
WIY GP+ G L Y V T+H
Sbjct: 713 DNWIYWAGPLIGGGLAGLIYGNVFMHTEH 799
Score = 28.9 bits (63), Expect = 0.32
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 18 LAGVAV--GSSVTIASIVAGPISGGSMNPARTLGPAIA--TSSYKGIWIYMVGPITGALL 73
L VAV G ++ +A V ISGG +NPA T G A+ + GI+ Y + + G+++
Sbjct: 242 LLAVAVCHGFALFVAVAVGANISGGHVNPAVTFGLAVGGQITILTGIF-YWIAQLLGSIV 418
Query: 74 GAW 76
+
Sbjct: 419 ACF 427
>TC85305 aquaporin
Length = 1221
Score = 56.2 bits (134), Expect = 2e-09
Identities = 33/107 (30%), Positives = 53/107 (48%), Gaps = 2/107 (1%)
Frame = +2
Query: 1 MVFISTAVATDSKA--TGELAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYK 58
+V+ A A D K G +A +A+G V +V G +G SMNPA + GPA+ + S+
Sbjct: 557 LVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWS 736
Query: 59 GIWIYMVGPITGALLGAWSYVVIQETDHKQDLATSQSPLSVKIHNEM 105
W+Y GP+ G + Y V+ + L T+ + +I N +
Sbjct: 737 NHWVYWAGPLIGGGIAGLVYEVLFINSTHEQLPTTDY*MGNEI*NSV 877
Score = 29.6 bits (65), Expect = 0.19
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 19 AGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIA--TSSYKGIWIYMVGPITGALLGA 75
A +A ++ +A V ISGG +NPA T G + + +GI +Y++ + G+++ +
Sbjct: 278 ASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGI-VYIIAQLLGSIVAS 451
>TC78780 similar to PIR|JQ1106|JQ1106 tonoplast intrinsic protein alpha -
kidney bean, partial (95%)
Length = 999
Score = 53.1 bits (126), Expect = 2e-08
Identities = 29/79 (36%), Positives = 42/79 (52%), Gaps = 2/79 (2%)
Frame = +1
Query: 5 STAVATDSKATGELAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYKGIWIYM 64
+TA+ + G +A +A+G V +V GP G MNPA GP++ + WI+
Sbjct: 499 ATAIDPKRGSIGAIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWRWHYHWIFW 678
Query: 65 VGPITGALLGA--WSYVVI 81
VGP GA L A + Y+VI
Sbjct: 679 VGPFIGAALAALIYEYLVI 735
Score = 30.8 bits (68), Expect = 0.083
Identities = 20/66 (30%), Positives = 35/66 (52%), Gaps = 4/66 (6%)
Frame = +1
Query: 14 ATGELAGVAVGSSVTIASIVAGP--ISGGSMNPARTLGPAIA--TSSYKGIWIYMVGPIT 69
+ GEL VA+ + + + V+ +SGG +NPA T G I S + ++ Y + +
Sbjct: 178 SAGELLAVALAHAFALFAAVSSSMHVSGGHVNPAVTFGALIGGRISVLRAVY-YWIAQLL 354
Query: 70 GALLGA 75
GA++ A
Sbjct: 355 GAIVAA 372
>TC77651 similar to PIR|JQ1106|JQ1106 tonoplast intrinsic protein alpha -
kidney bean, partial (98%)
Length = 1154
Score = 52.8 bits (125), Expect = 2e-08
Identities = 29/83 (34%), Positives = 41/83 (48%), Gaps = 2/83 (2%)
Frame = +3
Query: 1 MVFISTAVATDSK--ATGELAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYK 58
++++ A A D K G +A +A+ V + GP G MNPAR GPA+ +
Sbjct: 588 LMYVVYATAIDPKRGTIGTIAPLAIALVVGANILAGGPFDGACMNPARAFGPALVGWRWH 767
Query: 59 GIWIYMVGPITGALLGAWSYVVI 81
WI+ VGP GA + A Y I
Sbjct: 768 YHWIFWVGPFLGAAIAALLYEYI 836
Score = 26.9 bits (58), Expect = 1.2
Identities = 17/66 (25%), Positives = 36/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 14 ATGELAGVAVGSSVTIASIVAGP--ISGGSMNPARTLGPAIA--TSSYKGIWIYMVGPIT 69
++GEL +A+ + ++ + ++ +SGG +NPA T G + S + ++ Y V +
Sbjct: 285 SSGELLVLAIAHAFSLFAAISSSMHVSGGHINPAVTFGALLGGRISVLRALY-YWVAQLL 461
Query: 70 GALLGA 75
G+ + A
Sbjct: 462 GSFVAA 479
>TC77008 similar to PIR|A84653|A84653 hypothetical protein At2g25810
[imported] - Arabidopsis thaliana, partial (97%)
Length = 967
Score = 52.4 bits (124), Expect = 3e-08
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +2
Query: 1 MVFISTAVATDSKATGELAGVA---VGSSVTIASIVAGPISGGSMNPARTLGPAIATSSY 57
++F A D K G LAG+ VG V + G S SMNPAR+ GPA+ + ++
Sbjct: 467 LLFTVYATMVDPKK-GALAGLGPTLVGFVVGANILAGGAFSAASMNPARSFGPALVSGNW 643
Query: 58 KGIWIYMVGPITGALLGAWSY 78
W+Y VGP+ G L + Y
Sbjct: 644 TDHWVYWVGPLIGGGLAGFIY 706
Score = 30.4 bits (67), Expect = 0.11
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 4 ISTAVATDSKATGELAG---VAVGSSVTIASIV-AGPISGGSMNPARTLG 49
+ +A+ D + L G VA+ ++ +A ++ A ISGG +NPA TLG
Sbjct: 128 VGSAMTADKLSGDALVGLFFVAIAHALVVAVMISAAHISGGHLNPAVTLG 277
>TC76601 aquaporin-like protein PIP2 [Medicago truncatula]
Length = 1497
Score = 49.7 bits (117), Expect = 2e-07
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Frame = +2
Query: 9 ATDSKATGE------LAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYKGI-- 60
ATD+K + LA + +G +V + + PI+G +NPAR+LG AI + G
Sbjct: 902 ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDLGWDD 1081
Query: 61 -WIYMVGPITGALLGAWSYVVI 81
WI+ VGP GA L A +VV+
Sbjct: 1082HWIFWVGPFIGAALAALYHVVV 1147
Score = 30.0 bits (66), Expect = 0.14
Identities = 27/72 (37%), Positives = 34/72 (46%), Gaps = 4/72 (5%)
Frame = +2
Query: 8 VATDSKA-TGELAGVAVGSSVTIASIV--AGPISGGSMNPARTLGPAIATS-SYKGIWIY 63
V DSK T + G+A I ++V ISGG +NPA T G +A S Y
Sbjct: 542 VRADSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFY 721
Query: 64 MVGPITGALLGA 75
MV GA+ GA
Sbjct: 722 MVMQCLGAICGA 757
>TC85259 homologue to PIR|T09260|T09260 aquaporin-like transmembrane channel
protein - alfalfa, complete
Length = 1502
Score = 48.1 bits (113), Expect = 5e-07
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Frame = +3
Query: 9 ATDSKATGE------LAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYKGI-- 60
ATD+K + LA + +G +V + + PI+G +NPAR+LG AI + G
Sbjct: 675 ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDLGWDD 854
Query: 61 -WIYMVGPITGALLGAWSYVVI 81
WI+ VGP GA L A + V+
Sbjct: 855 HWIFWVGPFIGAALAALYHTVV 920
Score = 27.7 bits (60), Expect = 0.70
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 37 ISGGSMNPARTLGPAIATS-SYKGIWIYMVGPITGALLGA 75
ISGG +NPA T G +A S YMV GA+ GA
Sbjct: 411 ISGGHINPAVTFGLFLARKLSLTRAVFYMVMQTLGAICGA 530
>TC88670 similar to GP|535780|dbj|BAA05654.1| transmembrane protein
{Arabidopsis thaliana}, complete
Length = 1106
Score = 48.1 bits (113), Expect = 5e-07
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Frame = +1
Query: 9 ATDSKATGE------LAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATS---SYKG 59
ATD+K LA + +G +V + + PI+G +NPAR+LG A+ + ++
Sbjct: 637 ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDD 816
Query: 60 IWIYMVGPITGALLGAWSYVVI 81
WI+ VGP TGA L A + ++
Sbjct: 817 HWIFWVGPFTGAALAALYHQIV 882
Score = 26.6 bits (57), Expect = 1.6
Identities = 18/55 (32%), Positives = 24/55 (42%), Gaps = 1/55 (1%)
Frame = +1
Query: 22 AVGSSVTIASIVAGPISGGSMNPARTLGPAIATS-SYKGIWIYMVGPITGALLGA 75
A G + ISGG +NPA T G +A S Y++ GA+ GA
Sbjct: 331 AFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRTLFYIIMQCLGAICGA 495
>TC76539 aquaporin [Medicago truncatula]
Length = 1423
Score = 47.4 bits (111), Expect = 9e-07
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Frame = +1
Query: 9 ATDSKATGE------LAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYKG--- 59
ATD K + LA + +G +V + + P++G +NPAR+ GPA+ ++ K
Sbjct: 721 ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNEKAWDD 900
Query: 60 IWIYMVGPITGALLGA 75
WIY VGP GA + A
Sbjct: 901 QWIYWVGPFIGAAVAA 948
Score = 30.0 bits (66), Expect = 0.14
Identities = 19/55 (34%), Positives = 26/55 (46%), Gaps = 1/55 (1%)
Frame = +1
Query: 22 AVGSSVTIASIVAGPISGGSMNPARTLGPAIATS-SYKGIWIYMVGPITGALLGA 75
A G + I ISGG +NPA T G + S ++Y+V GA+ GA
Sbjct: 415 AFGGMIFILVYCTAGISGGHINPAVTFGLFVGRKVSLIRAFLYIVAQCLGAICGA 579
>TC85260 homologue to GP|3158476|gb|AAC17529.1| aquaporin 2 {Samanea saman},
complete
Length = 1282
Score = 47.0 bits (110), Expect = 1e-06
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Frame = +3
Query: 9 ATDSKATGE------LAGVAVGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYK---G 59
ATD K + LA + +G +V + + P++G +NPAR+LG A+ + K
Sbjct: 648 ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGSAVIYNKDKPWDD 827
Query: 60 IWIYMVGPITGALLGAWSYVVIQETDHKQDLATSQSPLSVKIH 102
WI+ VGP GA + A+ + I + L + +S +V +H
Sbjct: 828 HWIFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSNPTV*VH 956
Score = 34.3 bits (77), Expect = 0.008
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Frame = +3
Query: 1 MVFISTAVATDSKATGELAGV--------AVGSSVTIASIVAGPISGGSMNPARTLGPAI 52
+ I ++ TD KA G+ G A G + + ISGG +NPA T G +
Sbjct: 255 LTVIGYSIQTDVKAGGDACGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFL 434
Query: 53 A--TSSYKGIWIYMVGPITGALLG 74
A S + I +YMV GA+ G
Sbjct: 435 ARKVSLIRAI-MYMVAQCLGAIAG 503
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.313 0.129 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,588,088
Number of Sequences: 36976
Number of extensions: 26585
Number of successful extensions: 180
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of query: 110
length of database: 9,014,727
effective HSP length: 86
effective length of query: 24
effective length of database: 5,834,791
effective search space: 140034984
effective search space used: 140034984
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 50 (23.9 bits)
Medicago: description of AC125479.4