BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC125475.5 + phase: 0 /pseudo
(574 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC88298 weakly similar to GP|20198093|gb|AAD23629.2 putative vil... 312 2e-85
AW694471 similar to PIR|T14076|T14 probable villin [imported] - ... 199 3e-51
BG584838 weakly similar to PIR|T14076|T14 probable villin [impor... 167 1e-41
AW736221 similar to GP|22136974|gb putative villin 2 protein {Ar... 83 3e-16
CA921941 weakly similar to GP|22136974|gb| putative villin 2 pro... 69 4e-12
BG587889 similar to GP|22136974|gb putative villin 2 protein {Ar... 66 3e-11
TC82182 similar to GP|22136508|gb|AAM91332.1 unknown protein {Ar... 46 4e-05
AL370234 similar to PIR|T14076|T14 probable villin [imported] - ... 40 0.003
AA660262 weakly similar to GP|9759434|dbj| contains similarity t... 33 0.23
AW256886 similar to GP|22136508|gb unknown protein {Arabidopsis ... 33 0.30
AW697159 similar to GP|22136508|gb unknown protein {Arabidopsis ... 31 1.1
TC83073 similar to GP|2673918|gb|AAB88652.1| unknown protein {Ar... 30 1.9
TC77695 similar to PIR|T09704|T09704 probable arginine/serine-ri... 30 1.9
TC92853 similar to GP|20268748|gb|AAM14077.1 unknown protein {Ar... 30 1.9
TC85834 similar to GP|16974583|gb|AAL31187.1 AT4g39080/F19H22_18... 30 1.9
BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 30 3.3
TC87401 similar to PIR|B84587|B84587 probable glutaredoxin [impo... 30 3.3
AW696961 similar to GP|6714428|gb| putative NADP-dependent oxido... 30 3.3
TC79639 similar to GP|10728064|gb|AAF50455.2 CG7060 gene product... 29 4.3
TC88647 weakly similar to GP|2688828|gb|AAB88878.1| ethylene-for... 29 4.3
>TC88298 weakly similar to GP|20198093|gb|AAD23629.2 putative villin
{Arabidopsis thaliana}, partial (25%)
Length = 1430
Score = 312 bits (800), Expect = 2e-85
Identities = 176/447 (39%), Positives = 255/447 (56%), Gaps = 6/447 (1%)
Frame = +1
Query: 134 DETYKEDGVALFRIQGSGPESMQAIQVNSAASSLNSSYCYILQSESVVFTWYGNLTNSDD 193
DET+ E+ VALF + + P++MQAIQVN +SSLNSSYCYI+Q+E+ ++TW G+L+++ D
Sbjct: 28 DETHNENLVALFLVHCTSPDNMQAIQVNQVSSSLNSSYCYIVQTEAAMYTWIGSLSSARD 207
Query: 194 QELAERMLDLIKPDLQCRPQKEGAETEQFWELLGVKTEYSSQKIVREAENDPHLFSCNFS 253
L +RM++L+ P +EG E + FW++LG K EY +K ++ +DPHLF+ +
Sbjct: 208 HTLLDRMVELLNPTQLPVSVREGNEPDIFWDVLGGKAEYPKEKEIQGFIDDPHLFALKIT 387
Query: 254 E------EIHNFSQDDLMTEDIFILDCHSQIFVWVGQQVDPKRRVQALPIGEKFLEQDFL 307
+ EI+N++QDDL+TED+ +LDC +I++WVG K + +AL +G KFLE D L
Sbjct: 388 KGDFKVKEIYNYTQDDLITEDVLLLDCQREIYIWVGLHSVVKSKQEALNLGLKFLEMDVL 567
Query: 308 LETISCSAPIYIVMEGSEPPFFTRFFKWDSAKSAMLGNSYQRKLAIMKNGGTPPLVKPKR 367
+E +S PIY+VMEG EPPFFTRFF WD +K+ ++GNS++RKLAI+K
Sbjct: 568 VEGLSLEVPIYVVMEGYEPPFFTRFFLWDHSKANIIGNSFERKLAILKGNS--------- 720
Query: 368 RASVSYGGRSGGLPEKSQRSRSMSVSPDRVRVRGRSPAFNALAATFENSNVRNLSTPPPM 427
R S G +SG + +R R SP + + + R S+P P
Sbjct: 721 RDSTPNGHKSGSIISNGRR-------------RSSSPLPRSAGSDYRQLGNRRFSSPTPA 861
Query: 428 IRKLYPKSKTPDLATLAPKSSAISHLTSTFEPPSAREKLIPRSLKDTSKSNPETNSDNEN 487
+KL +S +SA + L+S+ E S EK
Sbjct: 862 AKKLLEESPA--------NNSAATELSSSNETASLTEK---------------------- 951
Query: 488 STGSREESLTIQEDVNEGEPEDNEGLPVYPYESVKTDSTDPMPDIDVTKREAYLSPEEFQ 547
D N D+E L +YPYE ++ S +P+ I++TKREAYLS EEF
Sbjct: 952 -------------DKN----VDDESLSIYPYEQLRVVSPNPVTGINLTKREAYLSHEEFH 1080
Query: 548 ERLGMTRSEFYKLPKWKQNKLKMAVQL 574
E+ GM +S FYKLP+WKQNKLKM++ L
Sbjct: 1081EKFGMPKSAFYKLPRWKQNKLKMSLDL 1161
>AW694471 similar to PIR|T14076|T14 probable villin [imported] - Arabidopsis
thaliana, partial (21%)
Length = 648
Score = 199 bits (505), Expect = 3e-51
Identities = 112/216 (51%), Positives = 138/216 (63%), Gaps = 30/216 (13%)
Frame = +3
Query: 77 DREEHLIGTWIGKNSVESFTSKQNGRINEVYS----IYGSYL*RQ*NNSILFHPPKLDCF 132
D+++ LIGTWIGKNSVE + N +++ + + N I FH L F
Sbjct: 3 DKDDCLIGTWIGKNSVEEERASANSLASKMVESMKFLASQARIYEGNEPIQFHSI-LQTF 179
Query: 133 *--------------------DETYKEDGVALFRIQGSGPESMQAIQVNSAASSLNSSYC 172
DETY ED VALFRIQG+GP++MQAIQV ASSLNSSYC
Sbjct: 180 IVFKGGLSDGYKTYIAEKEIPDETYNEDSVALFRIQGTGPDNMQAIQVEPVASSLNSSYC 359
Query: 173 YILQSESVVFTWYGNLTNSDDQELAERMLDLIKPDLQCRPQKEGAETEQFWELLGVKTEY 232
YIL + +FTW G+ T ++DQEL ERMLDLIKP+LQ +PQ+EG E+EQFW+LLG K+EY
Sbjct: 360 YILHNGPAIFTWSGSNTTAEDQELIERMLDLIKPNLQSKPQREGTESEQFWDLLGGKSEY 539
Query: 233 SSQKIVREAENDPHLFSCNFSE------EIHNFSQD 262
SQKI REAE+DPHLF C+FS EI+NFSQD
Sbjct: 540 PSQKISREAESDPHLFCCSFSNGNLKVTEIYNFSQD 647
>BG584838 weakly similar to PIR|T14076|T14 probable villin [imported] -
Arabidopsis thaliana, partial (13%)
Length = 811
Score = 167 bits (422), Expect = 1e-41
Identities = 78/171 (45%), Positives = 121/171 (70%), Gaps = 6/171 (3%)
Frame = +2
Query: 134 DETYKEDGVALFRIQGSGPESMQAIQVNSAASSLNSSYCYILQSESVVFTWYGNLTNSDD 193
DET+ E+ VALFR+QG+ P++MQAIQVN +SSLNSSYCYI+Q+E+ ++TW G+L+++ D
Sbjct: 41 DETHNENLVALFRVQGTSPDNMQAIQVNQVSSSLNSSYCYIVQTEAAMYTWIGSLSSARD 220
Query: 194 QELAERMLDLIKPDLQCRPQKEGAETEQFWELLGVKTEYSSQKIVREAENDPHLFSCNFS 253
L +RM++L+ P +EG E + FW++LG K EY +K ++ +DPHLF+ +
Sbjct: 221 HTLLDRMVELLNPTQLPVSVREGNEPDIFWDVLGGKAEYPKEKEIQGFIDDPHLFALKIT 400
Query: 254 ------EEIHNFSQDDLMTEDIFILDCHSQIFVWVGQQVDPKRRVQALPIG 298
+EI+N++QDDL+TED+ +LDC +I++WVG K + +AL +G
Sbjct: 401 KGDFKVKEIYNYTQDDLITEDVLLLDCQREIYIWVGLHSVVKSKQEALNLG 553
>AW736221 similar to GP|22136974|gb putative villin 2 protein {Arabidopsis
thaliana}, partial (13%)
Length = 420
Score = 83.2 bits (204), Expect = 3e-16
Identities = 36/86 (41%), Positives = 60/86 (68%)
Frame = +3
Query: 134 DETYKEDGVALFRIQGSGPESMQAIQVNSAASSLNSSYCYILQSESVVFTWYGNLTNSDD 193
DETY + +AL RI G+ + + +QV++ A+SLNS+ C++LQS S VFTW+GN ++ +
Sbjct: 162 DETYTAESIALIRISGTAIHNSKTMQVDAVAASLNSTECFLLQSGSTVFTWHGNQSSVEQ 341
Query: 194 QELAERMLDLIKPDLQCRPQKEGAET 219
Q+LA ++ + ++P + + KEG ET
Sbjct: 342 QQLATKVAEFLRPGIALKYSKEGTET 419
>CA921941 weakly similar to GP|22136974|gb| putative villin 2 protein
{Arabidopsis thaliana}, partial (6%)
Length = 834
Score = 69.3 bits (168), Expect = 4e-12
Identities = 45/135 (33%), Positives = 69/135 (50%), Gaps = 4/135 (2%)
Frame = -3
Query: 444 APKSSAISHLTSTFEPPS--AREKLIPRSLKDTSKSNPETNSDNE--NSTGSREESLTIQ 499
+P SS + + +E + A+ + +P S + + ET E + TGS S + Q
Sbjct: 814 SPDSSPVQSSSPVWEGSTLDAKSESVP-SESEGREEVTETKETEELVSETGSNGNSESKQ 638
Query: 500 EDVNEGEPEDNEGLPVYPYESVKTDSTDPMPDIDVTKREAYLSPEEFQERLGMTRSEFYK 559
E+V +G N V+ YE +K S + +D+ +RE YLS EEF+ M + F K
Sbjct: 637 ENVEDGNDNQNSQ-SVFTYEQLKAKSGSDLSGVDLKRRETYLSDEEFETVFAMKKEAFTK 461
Query: 560 LPKWKQNKLKMAVQL 574
LP+WKQ+ LK V L
Sbjct: 460 LPRWKQDMLKRKVDL 416
>BG587889 similar to GP|22136974|gb putative villin 2 protein {Arabidopsis
thaliana}, partial (15%)
Length = 799
Score = 66.2 bits (160), Expect = 3e-11
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 21/219 (9%)
Frame = +3
Query: 308 LETISCSAPIYIVMEGSEPPFFTRFFK--WDSAKSAMLGNSYQRKLAIMKNGGTPPLVKP 365
LE +S P+Y V EG+EP FFT +F WD ++ + GNS+Q++++++ G
Sbjct: 30 LEGLSPRVPLYKVTEGNEPFFFTTYFSWDWDYTRAKVHGNSFQKQVSLLFGIG------- 188
Query: 366 KRRASVSYGGRSGGLPE-------------KSQRSRSMSVSPDRVR------VRGRSPAF 406
G SGG P KS ++ S+S +R+ R R+ A
Sbjct: 189 -HAVEEKSNGSSGGGPRQRAEALAALTSAFKSSLEKTTSMSQERLNGLNHGGPRQRAEAL 365
Query: 407 NALAATFENSNVRNLSTPPPMIRKLYPKSKTPDLATLAPKSSAISHLTSTFEPPSAREKL 466
AL + F +S+ TP P + K + +A L+ +A S P A +
Sbjct: 366 AALNSAFSSSSTTKKVTPRPSV-KGQGSQRAAAVAALSSVLTAEKKKQSPDTSPVASDSP 542
Query: 467 IPRSLKDTSKSNPETNSDNENSTGSREESLTIQEDVNEG 505
+P S +KS E + +E + E ++ D N G
Sbjct: 543 VPESSISEAKSESEYSEVDEATEAKEVEEVSPDSDSNGG 659
>TC82182 similar to GP|22136508|gb|AAM91332.1 unknown protein {Arabidopsis
thaliana}, partial (40%)
Length = 750
Score = 45.8 bits (107), Expect = 4e-05
Identities = 52/233 (22%), Positives = 95/233 (40%), Gaps = 25/233 (10%)
Frame = +1
Query: 151 GPESMQAIQVNSAASSLNSSYCYILQSESVVFTWYGNLTNSDDQELAERMLDLIKPDLQC 210
G ++ QV A SSLN +IL ++ ++ + G +N ++ A ++ +K +
Sbjct: 82 GKRVVRLKQVPFARSSLNHDDVFILDTDDKIYQFNGANSNIQERAKALEVVQFLKEEYH- 258
Query: 211 RPQKEG---------------AETEQFWELLG-----VKTEYSSQKIVREAENDPHLFSC 250
EG +++ +FW L G K S I+ EA L+S
Sbjct: 259 ----EGKCDVAIVDDGKLDTESDSGEFWLLFGGFAPIAKKVISEDDIIPEAI-PAQLYSI 423
Query: 251 ---NFSEEIHNFSQDDLMTEDIFILDCHSQIFVWVGQQVDPKRRVQALPIGEKFLEQDFL 307
E S+ L ++LDC +++F+W G+ + R A E+F+
Sbjct: 424 IDREVKSEEGELSKSLLENNKCYLLDCGAEVFIWFGRGTQVEERKAACQAAEEFVSG--- 594
Query: 308 LETISCSAPIYIVMEGSEP-PFFTRFFKWDSAKSAMLGNSYQRKL-AIMKNGG 358
+ S I + +G E F + F W S ++ + + K+ A++K G
Sbjct: 595 -QNRPKSTRITRITQGYETRSFKSNFDSWPSGSASTVAEDGKGKVTALLKQQG 750
>AL370234 similar to PIR|T14076|T14 probable villin [imported] -
Arabidopsis thaliana, partial (15%)
Length = 551
Score = 39.7 bits (91), Expect = 0.003
Identities = 18/21 (85%), Positives = 19/21 (89%)
Frame = -3
Query: 41 QVWRVNGQEKNLLAATDQSKF 61
QVWRVNGQEK LL A+DQSKF
Sbjct: 63 QVWRVNGQEKILLPASDQSKF 1
Score = 35.4 bits (80), Expect = 0.060
Identities = 28/102 (27%), Positives = 44/102 (42%), Gaps = 2/102 (1%)
Frame = -3
Query: 255 EIHNFSQDDLMTEDIFILDCHSQIFVWVGQQVDPKRRVQALPIGEKFLEQDFLLETISCS 314
E + ++ L T +ILDC +IFVW+G+ R A + D L+ I
Sbjct: 444 EADSLRREFLDTNKCYILDCGLEIFVWMGRNTSLDERKSASGVA------DELVSGIDQL 283
Query: 315 AP-IYIVMEGSEPPFF-TRFFKWDSAKSAMLGNSYQRKLAIM 354
P I V+EG E F ++F W + + K+A +
Sbjct: 282 KPQIVRVIEGFETVLFKSKFDSWPQTPDVTVSEDGRGKVAAL 157
Score = 32.0 bits (71), Expect = 0.67
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = -3
Query: 167 LNSSYCYILQSESVVFTWYGNLTNSDDQELAERMLD-LIKPDLQCRPQ----KEGAETEQ 221
L+++ CYIL +F W G T+ D+++ A + D L+ Q +PQ EG ET
Sbjct: 417 LDTNKCYILDCGLEIFVWMGRNTSLDERKSASGVADELVSGIDQLKPQIVRVIEGFETVL 238
Query: 222 F 222
F
Sbjct: 237 F 235
>AA660262 weakly similar to GP|9759434|dbj| contains similarity to
maturase-related protein~gene_id:MQD22.6 {Arabidopsis
thaliana}, partial (3%)
Length = 626
Score = 33.5 bits (75), Expect = 0.23
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 411 ATFENSNVRNLSTPPPMIRKLYPKSKTPDLATLAPKSSAISHLTSTFEPPSAREKLIPRS 470
+ ++ +R+ ST P+ TP LAT P SA+ H T PPS+R+ L P S
Sbjct: 188 SAISSTQIRSHSTHTPLSLPY-----TPLLATSPPLPSAVHHPTQATLPPSSRKXLSPSS 352
>AW256886 similar to GP|22136508|gb unknown protein {Arabidopsis thaliana},
partial (28%)
Length = 557
Score = 33.1 bits (74), Expect = 0.30
Identities = 17/55 (30%), Positives = 27/55 (48%), Gaps = 1/55 (1%)
Frame = +2
Query: 38 ITSQVWRVNGQEKNLLAATDQSKFYSGDCYIFQYSYPGEDREEHL-IGTWIGKNS 91
+ + +WR+ + L +D KFY GD YI + G+ I WIGK++
Sbjct: 74 VGTDIWRIENFQPVPLPKSDHGKFYMGDSYIILQTTQGKGGSYLFDIHFWIGKDT 238
>AW697159 similar to GP|22136508|gb unknown protein {Arabidopsis thaliana},
partial (21%)
Length = 651
Score = 31.2 bits (69), Expect = 1.1
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 40 SQVWRVNGQEKNLLAATDQSKFYSGDCYIFQYSYPGEDREE-HLIGTWIGKNS 91
+++WR+ + L ++ KFY GD YI + G+ + + WIGK++
Sbjct: 291 TEIWRIENFQPVPLPKSEYGKFYMGDSYIILQTTQGKGAAYFYDLHFWIGKDT 449
>TC83073 similar to GP|2673918|gb|AAB88652.1| unknown protein {Arabidopsis
thaliana}, partial (8%)
Length = 824
Score = 30.4 bits (67), Expect = 1.9
Identities = 25/84 (29%), Positives = 38/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 447 SSAISHLTSTFEPPSAREKLIPRSLKDTSKSNPETNSDNENSTGSREESLTIQEDVNEGE 506
SS S+LT PSA + + D S+S ++DN N +G L+ +++N G
Sbjct: 81 SSLFSNLT-----PSADSNKLTKHFWDGSESERFVSNDNNNISG-----LSCSKEMNSGY 230
Query: 507 PEDNEGLPV-YPYESVKTDSTDPM 529
GLP YP + S+ M
Sbjct: 231 GAGGSGLPPHYPRHGSTSTSSSAM 302
>TC77695 similar to PIR|T09704|T09704 probable arginine/serine-rich splicing
factor - alfalfa, partial (83%)
Length = 1657
Score = 30.4 bits (67), Expect = 1.9
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Frame = +1
Query: 376 RSGGLPEKSQRSRSMSVSPDRVRVRGRSPAFNALAATFENSNVRNLSTPPPMIRKLYPKS 435
R G + +RSRS S SPD R RGR + + S R++ + P R PK
Sbjct: 523 RGGRDRDYRRRSRSRSASPDYKR-RGRGRYDDERRS---RSRSRSVDSRSPARRSPSPKR 690
Query: 436 KTPDLATLAPKSSAISHLTSTFEPPSAREK---------LIPRSLKDTSKSNPETNSDNE 486
+++PK S + E P R + + PR + S+S NSD +
Sbjct: 691 SPSPKKSISPKKSPSP--SPRRESPDTRSRDGRSPTSRSVSPRGRPEASQSPSPRNSDGD 864
>TC92853 similar to GP|20268748|gb|AAM14077.1 unknown protein {Arabidopsis
thaliana}, partial (21%)
Length = 761
Score = 30.4 bits (67), Expect = 1.9
Identities = 27/93 (29%), Positives = 40/93 (42%), Gaps = 2/93 (2%)
Frame = +3
Query: 447 SSAISHLTSTFEPPSAREKLIP--RSLKDTSKSNPETNSDNENSTGSREESLTIQEDVNE 504
SS T +F PS + IP S KDT S + ++D+E EE ED E
Sbjct: 258 SSTRRRATISFVAPSPPKPKIPVETSGKDTKGS--DNDNDDEGKENEEEEE---DEDEEE 422
Query: 505 GEPEDNEGLPVYPYESVKTDSTDPMPDIDVTKR 537
+ D++G + + + DS D + KR
Sbjct: 423 EDTSDDDGSESEEFNADEEDSD*TRADSAINKR 521
>TC85834 similar to GP|16974583|gb|AAL31187.1 AT4g39080/F19H22_180
{Arabidopsis thaliana}, partial (97%)
Length = 2959
Score = 30.4 bits (67), Expect = 1.9
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +2
Query: 12 IVILIIDFISNIFFCLIVYVVDKCYTITSQVWRVNGQEKNLLAATDQSKFYSGDCYIF-Q 70
+VILI+ I IF + V +V + + R++ E Q+KFY GD Y+F
Sbjct: 2420 VVILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEY-------QNKFYEGDGYLFLP 2578
Query: 71 YSYPGEDREEHLIGTWIGKNSV 92
+S+ D E+ ++ I K V
Sbjct: 2579 FSFSLLDEEDEML*KQINKCGV 2644
>BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (30%)
Length = 1338
Score = 29.6 bits (65), Expect = 3.3
Identities = 30/101 (29%), Positives = 40/101 (38%)
Frame = -2
Query: 360 PPLVKPKRRASVSYGGRSGGLPEKSQRSRSMSVSPDRVRVRGRSPAFNALAATFENSNVR 419
PP ++P A V++G R P +R S + P V + G P
Sbjct: 437 PPTLRPPPPAPVAHGHR----PSPPRRIGSSTPPPPFVPIAGFPPP-------------- 312
Query: 420 NLSTPPPMIRKLYPKSKTPDLATLAPKSSAISHLTSTFEPP 460
S PPP L+P + L AP SS + LTS PP
Sbjct: 311 -PSPPPPPPLPLHPPPQLSSLPPHAP-SSFLLPLTSPPPPP 195
>TC87401 similar to PIR|B84587|B84587 probable glutaredoxin [imported] -
Arabidopsis thaliana, partial (63%)
Length = 914
Score = 29.6 bits (65), Expect = 3.3
Identities = 20/69 (28%), Positives = 36/69 (51%), Gaps = 11/69 (15%)
Frame = +3
Query: 447 SSAISHLTSTFEPPSAREKLI-----------PRSLKDTSKSNPETNSDNENSTGSREES 495
SS+IS + + + P S +I PR++ +S +P ++S + +S GSR E
Sbjct: 108 SSSISKIFTFYTPISTSSPIITNASSRRAPTFPRAMSSSSSPSPSSSSSSSSSFGSRLEE 287
Query: 496 LTIQEDVNE 504
TI+ V++
Sbjct: 288 -TIKNTVSQ 311
>AW696961 similar to GP|6714428|gb| putative NADP-dependent oxidoreductase
{Arabidopsis thaliana}, partial (47%)
Length = 634
Score = 29.6 bits (65), Expect = 3.3
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 7 YLDELIVILIIDFISNIFFCLIVYVVDKCYT 37
++ +L +L+++ N+ C++VYVV KC+T
Sbjct: 503 FMFQLHPVLLVNL*VNLQNCMVVYVVGKCWT 595
>TC79639 similar to GP|10728064|gb|AAF50455.2 CG7060 gene product
{Drosophila melanogaster}, partial (2%)
Length = 757
Score = 29.3 bits (64), Expect = 4.3
Identities = 24/90 (26%), Positives = 47/90 (51%), Gaps = 4/90 (4%)
Frame = +1
Query: 465 KLIPRSLKDTSKSNPETNSDNENSTGSREESLTIQEDVNEGEPEDNEGLPVYPYESVKTD 524
K I +S ++ +K+ + N N NS +EES ++ + + E++ V+P ++T
Sbjct: 172 KNIEKSKENNNKNKKKLNFTNGNSK-EQEESGRKKKHAKDDDEEEDAKTHVFPMNRIRTM 348
Query: 525 STDPMPDIDVTKREAYL----SPEEFQERL 550
+ D+ V+ +EA L + E+F E+L
Sbjct: 349 LKGEISDLRVS-QEAILAINNAAEKFLEQL 435
>TC88647 weakly similar to GP|2688828|gb|AAB88878.1|
ethylene-forming-enzyme-like dioxygenase {Prunus
armeniaca}, partial (47%)
Length = 978
Score = 29.3 bits (64), Expect = 4.3
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +1
Query: 462 AREKLIPRSLKDTSKSNPETNSD---NENSTGSREESLTI 498
+ EKL+PRS+++ S E S N N GS+E+S T+
Sbjct: 148 SEEKLLPRSVQEMSMDGDEPPSQYLVNGNVFGSKEDSSTL 267
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,918,565
Number of Sequences: 36976
Number of extensions: 251787
Number of successful extensions: 1366
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of query: 574
length of database: 9,014,727
effective HSP length: 101
effective length of query: 473
effective length of database: 5,280,151
effective search space: 2497511423
effective search space used: 2497511423
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Medicago: description of AC125475.5