
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124972.9 + phase: 0 /pseudo
(527 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC83102 similar to GP|11994404|dbj|BAB02363. gb|AAC28507.1~gene_... 147 7e-36
TC78456 similar to GP|11994404|dbj|BAB02363. gb|AAC28507.1~gene_... 144 6e-35
BQ149337 weakly similar to GP|13272459|gb unknown protein {Arabi... 129 3e-30
TC92785 weakly similar to GP|13937234|gb|AAK50109.1 AT5g38030/F1... 118 6e-27
BQ124842 weakly similar to GP|19310633|gb unknown protein {Arabi... 96 3e-20
TC80665 weakly similar to GP|19310633|gb|AAL85047.1 unknown prot... 92 6e-19
TC93253 weakly similar to GP|14030731|gb|AAK53040.1 AT5g65380/MN... 90 2e-18
BE320706 weakly similar to GP|23617058|db putative integral memb... 77 2e-14
BF639353 similar to GP|17979043|gb| unknown protein {Arabidopsis... 66 3e-11
BQ750943 weakly similar to GP|21627817|emb hypothetical protein ... 59 6e-09
CB894605 weakly similar to GP|22136880|gb| unknown protein {Arab... 47 1e-05
TC78455 similar to GP|11994404|dbj|BAB02363. gb|AAC28507.1~gene_... 45 9e-05
TC91120 similar to GP|11994404|dbj|BAB02363. gb|AAC28507.1~gene_... 43 3e-04
AW980583 weakly similar to GP|16797803|db hypothetical membrane ... 40 0.002
BI267034 weakly similar to PIR|T09556|T095 hypothetical protein ... 39 0.006
BG589013 weakly similar to GP|20805025|db contains EST D15170(C0... 38 0.011
TC81908 similar to GP|15810018|gb|AAL06936.1 AT5g38030/F16F17_30... 36 0.032
BE319359 similar to GP|19310633|gb| unknown protein {Arabidopsis... 33 0.21
BQ138336 similar to GP|17065360|gb Unknown protein {Arabidopsis ... 33 0.27
BG454776 weakly similar to PIR|T49896|T4 glycine/proline-rich pr... 33 0.27
>TC83102 similar to GP|11994404|dbj|BAB02363.
gb|AAC28507.1~gene_id:MIL23.25~strong similarity to
unknown protein {Arabidopsis thaliana}, partial (36%)
Length = 1048
Score = 147 bits (372), Expect = 7e-36
Identities = 76/131 (58%), Positives = 95/131 (72%)
Frame = +3
Query: 342 WDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSR 401
W + +G AAASVRVSNELGA +P+ A FSV VV S +ISVI A I+L LR +S
Sbjct: 228 WVFMISVGFNAAASVRVSNELGARNPKSASFSVKVVTVISFIISVIAALIVLALRDVISY 407
Query: 402 LFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTV 461
+FT V AVSDL PLL++S++LNGIQP+LSGVA+GCGWQA VAYVN+ CYY+ G+ +
Sbjct: 408 VFTEGEVVAAAVSDLCPLLSLSLVLNGIQPVLSGVAVGCGWQAFVAYVNVGCYYIAGIPL 587
Query: 462 GCVLGFKTSLG 472
G LGF + G
Sbjct: 588 GAGLGFYFNFG 620
>TC78456 similar to GP|11994404|dbj|BAB02363.
gb|AAC28507.1~gene_id:MIL23.25~strong similarity to
unknown protein {Arabidopsis thaliana}, partial (40%)
Length = 920
Score = 144 bits (364), Expect = 6e-35
Identities = 75/147 (51%), Positives = 99/147 (67%)
Frame = +1
Query: 326 DSPSKCTSIFSMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLIS 385
DS S CT++ W + +G AAASVRVSNELGA + + A FSV VV S +I
Sbjct: 58 DSLSICTTVSG-----WTFMISVGFQAAASVRVSNELGAGNSKSASFSVVVVTVISFIIC 222
Query: 386 VIFAAIILILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQAL 445
I A ++L LR +S +FT V AVS+L+PLLA++++LNG+QP+LSGVA+GCGWQ
Sbjct: 223 AIIALVVLALRDVISYVFTEGEEVAAAVSNLSPLLALAIVLNGVQPVLSGVAVGCGWQTF 402
Query: 446 VAYVNLVCYYVIGLTVGCVLGFKTSLG 472
VAYVN+ CYY +G+ +G VLGF G
Sbjct: 403 VAYVNVGCYYGLGIPLGAVLGFYFKFG 483
>BQ149337 weakly similar to GP|13272459|gb unknown protein {Arabidopsis
thaliana}, partial (21%)
Length = 622
Score = 129 bits (324), Expect = 3e-30
Identities = 72/139 (51%), Positives = 93/139 (66%)
Frame = +2
Query: 352 AAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIE 411
AAASVRV+NELG R AKFS+ + S I IF I L L+ LS +FTSDS V
Sbjct: 8 AAASVRVANELGRGSSRDAKFSIVINALTSFAIGFIFFLIFLFLKKKLSYIFTSDSDVAN 187
Query: 412 AVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSL 471
AV DL+ LA+S+LLN +QP+LSGV++G GWQ++VAYVN+ CYY+IG+ VG V+G +L
Sbjct: 188 AVGDLSFWLALSMLLNSVQPVLSGVSVGAGWQSIVAYVNIGCYYLIGIPVGVVIGVVYNL 367
Query: 472 GVARSTMNLIVIYIGHLVG 490
G+ I+IG L G
Sbjct: 368 GIKG-------IWIGMLFG 403
>TC92785 weakly similar to GP|13937234|gb|AAK50109.1 AT5g38030/F16F17_30
{Arabidopsis thaliana}, partial (30%)
Length = 533
Score = 118 bits (295), Expect = 6e-27
Identities = 56/107 (52%), Positives = 77/107 (71%)
Frame = +1
Query: 367 PRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLL 426
PR A+FS+ V S+LI ++ A +++I R FT+D V + V DLTPLLA+ V++
Sbjct: 1 PRTARFSLVVAVITSILIGLLLALVLIISRDKYPAYFTTDKEVQDLVKDLTPLLALCVVI 180
Query: 427 NGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSLGV 473
N +QP+LSGVAIG GWQA VAYVN+ CYY+ G+ VG +LG+K +LGV
Sbjct: 181 NNVQPVLSGVAIGAGWQAAVAYVNIACYYLFGIPVGLILGYKVNLGV 321
>BQ124842 weakly similar to GP|19310633|gb unknown protein {Arabidopsis
thaliana}, partial (31%)
Length = 706
Score = 96.3 bits (238), Expect = 3e-20
Identities = 61/186 (32%), Positives = 92/186 (48%)
Frame = +2
Query: 300 SISIWYVNNFSLNNVSCLFVNMLSNHDSPSKCTSIFSMNYLNWDMQVMLGLGAAASVRVS 359
S+ +W L +S L N + S C + F + ++ + G A S+RVS
Sbjct: 92 SLKVWTFELMVL--MSGLLPNPVIETSVLSICLNTFGLAWM-----IPFGCSCAVSIRVS 250
Query: 360 NELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIEAVSDLTPL 419
NELG +P A +V V S + ++ +++ R L++ D VI VS + P+
Sbjct: 251 NELGGGNPNGASLAVRVALSISFIAALFMVLSMILARKVWGHLYSDDKQVIRYVSAMMPI 430
Query: 420 LAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSLGVARSTMN 479
LAIS L+ IQ LSGV GCGWQ + AYVNL +YV+G+ VL F + +
Sbjct: 431 LAISSFLDAIQSTLSGVLAGCGWQKIGAYVNLGSFYVVGVPCAVVLAFFVHMHAMGLWLG 610
Query: 480 LIVIYI 485
+I +I
Sbjct: 611 IISAFI 628
>TC80665 weakly similar to GP|19310633|gb|AAL85047.1 unknown protein
{Arabidopsis thaliana}, partial (31%)
Length = 894
Score = 91.7 bits (226), Expect = 6e-19
Identities = 44/113 (38%), Positives = 75/113 (65%)
Frame = +3
Query: 360 NELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIEAVSDLTPL 419
NELGA +PR A+ +V+VV +++ S++ A+I+++R ++++ V++ V+ + P+
Sbjct: 3 NELGAGNPRAARLAVYVVVVIAIIESIVVGAVIILIRNIWGYAYSNEEEVVKYVAIMLPI 182
Query: 420 LAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSLG 472
+A+S L+GIQ +LSG A G GWQ + AYVNL YY++G+ VL F +G
Sbjct: 183 IAVSNFLDGIQSVLSGTARGVGWQKIGAYVNLGSYYLVGIPAAVVLAFVLHVG 341
>TC93253 weakly similar to GP|14030731|gb|AAK53040.1 AT5g65380/MNA5_11
{Arabidopsis thaliana}, partial (25%)
Length = 633
Score = 90.1 bits (222), Expect = 2e-18
Identities = 40/72 (55%), Positives = 58/72 (80%)
Frame = +2
Query: 402 LFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTV 461
+FT+ V+EAV+D++ LLA+++LLN +QPILSGVA+G GWQ VAYVN+ CYY+IGL +
Sbjct: 29 IFTTSPPVLEAVNDMSILLAVTILLNSVQPILSGVAVGSGWQVFVAYVNIGCYYLIGLPL 208
Query: 462 GCVLGFKTSLGV 473
G ++G+ + GV
Sbjct: 209 GILMGWVFNTGV 244
>BE320706 weakly similar to GP|23617058|db putative integral membrane protein
{Oryza sativa (japonica cultivar-group)}, partial (18%)
Length = 330
Score = 76.6 bits (187), Expect = 2e-14
Identities = 43/98 (43%), Positives = 59/98 (59%)
Frame = +2
Query: 346 VMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTS 405
++ GL AAAS RVSNELGA P AK ++ V S+L+ FA +I+ RLF+S
Sbjct: 35 IIYGLSAAASTRVSNELGAGQPERAKHAMRVSLKLSILLGFCFALMIVFGHGIWIRLFSS 214
Query: 406 DS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQ 443
+ + + P LAIS+LL+ +Q +LSGV CGWQ
Sbjct: 215 SPTIKHEFASIAPFLAISILLDSVQGVLSGVVKACGWQ 328
>BF639353 similar to GP|17979043|gb| unknown protein {Arabidopsis thaliana},
partial (16%)
Length = 551
Score = 66.2 bits (160), Expect = 3e-11
Identities = 28/46 (60%), Positives = 36/46 (77%)
Frame = +1
Query: 426 LNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSL 471
L+ +Q +LSGVA GCGWQ L YVNL +Y+IGL + C+LGFKT+L
Sbjct: 1 LDSVQGVLSGVARGCGWQHLTVYVNLATFYLIGLPISCLLGFKTNL 138
>BQ750943 weakly similar to GP|21627817|emb hypothetical protein {Aspergillus
fumigatus}, partial (7%)
Length = 711
Score = 58.5 bits (140), Expect = 6e-09
Identities = 37/123 (30%), Positives = 61/123 (49%)
Frame = -1
Query: 345 QVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFT 404
Q+ + AAS R++N +GA AK + V G ++ + V + LR L RLF+
Sbjct: 708 QIPFPVSIAASTRIANLIGAGLVDAAKTTGKVAFGAALTVGVFNVILFGGLRFHLPRLFS 529
Query: 405 SDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCV 464
+D VI V+++ PL A+ + +G+ G+ G G ++ Y NL YY + L +
Sbjct: 528 NDEEVIAIVANVLPLCAVMQVFDGLAAGAHGLLRGIGRPSIGGYANLAVYYGVALPLSFS 349
Query: 465 LGF 467
F
Sbjct: 348 TAF 340
>CB894605 weakly similar to GP|22136880|gb| unknown protein {Arabidopsis
thaliana}, partial (12%)
Length = 183
Score = 47.4 bits (111), Expect = 1e-05
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = +1
Query: 342 WDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILR 396
W+M + LG AAASVRVSNELG + AKFS+ V S+ I L R
Sbjct: 1 WEMMISLGFMAAASVRVSNELGKGSEKAAKFSIVVTGLTSLGIGSFLFLFFLFFR 165
>TC78455 similar to GP|11994404|dbj|BAB02363.
gb|AAC28507.1~gene_id:MIL23.25~strong similarity to
unknown protein {Arabidopsis thaliana}, partial (48%)
Length = 1060
Score = 44.7 bits (104), Expect = 9e-05
Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Frame = +2
Query: 74 YFVDI*DL*SLLEHP*PLLEFKVLLMALC*EWQVQCKMYVDKLMEPKNMQQCASLCKEHS 133
YF+ I + SLL P ++ K LLM C W V + YVDK +E KNM+ A +CK+
Sbjct: 290 YFLVILVIWSLLLLPLEIMVSKYLLMDSCWAWGVLLRHYVDKHLEQKNMKC*AYICKDQQ 469
Query: 134 SYILVQQSF*HFSIGSPEIF*KS*DRRRA*PCKVKCSLMDLFLNSMHLHSAVP------C 187
+ F* SP F* *+ + K FL+ + H +P
Sbjct: 470 CFSQ*PV*F*Q*YTYSPNQF*YF*ENHQ------KLHQQHPFLSLV*SHKYLPML*TFQS 631
Query: 188 RGFFKHR 194
+ FFKH+
Sbjct: 632 KNFFKHK 652
>TC91120 similar to GP|11994404|dbj|BAB02363.
gb|AAC28507.1~gene_id:MIL23.25~strong similarity to
unknown protein {Arabidopsis thaliana}, partial (35%)
Length = 665
Score = 43.1 bits (100), Expect = 3e-04
Identities = 39/111 (35%), Positives = 50/111 (44%), Gaps = 7/111 (6%)
Frame = +1
Query: 94 FKVLLMALC*EWQVQCKMYVDKLMEPKNMQQCASLCKEHSSYILVQQSF*HFSIGSPEIF 153
FK LLM C W+VQ + YVDK ME KNM C EH QQ F* + S ++F
Sbjct: 322 FKSLLMVSCWVWEVQLRHYVDKHMEQKNM-----AC*EH--IYKDQQFF*Q*PVFSSQLF 480
Query: 154 -------*KS*DRRRA*PCKVKCSLMDLFLNSMHLHSAVPCRGFFKHRTLF 197
* S D + * + MDL + + + FFKH+ F
Sbjct: 481 TY*VNQS*YSLDNHQE*LLQQHFLCMDLSHKYLLMQ*ISQSKNFFKHKV*F 633
>AW980583 weakly similar to GP|16797803|db hypothetical membrane protein-1
{Marchantia polymorpha}, partial (21%)
Length = 631
Score = 40.4 bits (93), Expect = 0.002
Identities = 25/72 (34%), Positives = 40/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 327 SPSKCTSIFS--MNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLI 384
+P TS+ + MN + + G AAS+RVSNELGA +PR A +V VV ++
Sbjct: 402 NPKLQTSVLAICMNIASVVWMLSSGFTGAASIRVSNELGAGNPRAAHLAVCVVVVLNITE 581
Query: 385 SVIFAAIILILR 396
+ ++++LR
Sbjct: 582 AFFVGTVMILLR 617
>BI267034 weakly similar to PIR|T09556|T095 hypothetical protein L73G19.20 -
Arabidopsis thaliana, partial (13%)
Length = 428
Score = 38.5 bits (88), Expect = 0.006
Identities = 25/74 (33%), Positives = 38/74 (50%), Gaps = 2/74 (2%)
Frame = +3
Query: 91 LLEFK--VLLMALC*EWQVQCKMYVDKLMEPKNMQQCASLCKEHSSYILVQQSF*HFSIG 148
L+ FK VL C EW+++C+ +VDK M KNM+ + K+H + F +
Sbjct: 126 LVSFKEGVLFFLFCWEWRLRCQPFVDKHMVQKNME*WEYIFKDHG*FYS*LHLFFFLCLS 305
Query: 149 SPEIF*KS*DRRRA 162
S F* S* + +A
Sbjct: 306 SQPRF*HS*AKMKA 347
>BG589013 weakly similar to GP|20805025|db contains EST D15170(C0202)~unknown
protein {Oryza sativa (japonica cultivar-group)},
partial (42%)
Length = 786
Score = 37.7 bits (86), Expect = 0.011
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +1
Query: 327 SPSKCTSIFS--MNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFV 376
+P TS+ S +N + + +GA+AS RVSNELGA +P+ AK +V V
Sbjct: 541 NPQLETSVLSVCLNTTSLHFFIPYAIGASASTRVSNELGAGNPKTAKGAVRV 696
>TC81908 similar to GP|15810018|gb|AAL06936.1 AT5g38030/F16F17_30
{Arabidopsis thaliana}, partial (41%)
Length = 499
Score = 36.2 bits (82), Expect = 0.032
Identities = 22/62 (35%), Positives = 30/62 (47%)
Frame = +3
Query: 99 MALC*EWQVQCKMYVDKLMEPKNMQQCASLCKEHSSYILVQQSF*HFSIGSPEIF*KS*D 158
+A C W+ + K YVDK E +N CK+H Y F SP+ F* S*D
Sbjct: 306 LA*CLGWEARSKHYVDKQ*EQENSTC*EYTCKDHG*YYFPWHFHYAFYTSSPDPF*NS*D 485
Query: 159 RR 160
++
Sbjct: 486 KQ 491
>BE319359 similar to GP|19310633|gb| unknown protein {Arabidopsis thaliana},
partial (20%)
Length = 313
Score = 33.5 bits (75), Expect = 0.21
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +2
Query: 327 SPSKCTSIFSMNY----LNWDMQVMLGLGAAASVRVSNELGAAHPR 368
+P TS+ S++ L W + GL A S+RVSNELGA +PR
Sbjct: 179 NPKLETSVLSISLNTSALVW--MIPFGLSGAISIRVSNELGAGNPR 310
>BQ138336 similar to GP|17065360|gb Unknown protein {Arabidopsis thaliana},
partial (20%)
Length = 536
Score = 33.1 bits (74), Expect = 0.27
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +2
Query: 91 LLEFKVLL----MALC*EWQVQCKMYVDKLMEPKNMQQCASLCKEHSSYILVQQSF*HFS 146
LL F + L M EW+++C+ +VDK M KNM+ + K+H + F
Sbjct: 227 LLLFSLFLLGSPMVFSWEWRLRCQPFVDKHMVQKNME*WEYIFKDHG*FYS*LHLFFFLC 406
Query: 147 IGSPEIF*KS*DRRRA 162
+ S F* S* + +A
Sbjct: 407 LSSQPRF*HS*AKMKA 454
>BG454776 weakly similar to PIR|T49896|T4 glycine/proline-rich protein -
Arabidopsis thaliana, partial (7%)
Length = 680
Score = 33.1 bits (74), Expect = 0.27
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = -1
Query: 393 LILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYV-NL 451
L+L VGL V+ V L L + +++ + ++ G+ +G G +V V L
Sbjct: 680 LVLGVGLVVCL-----VVSLVIGLVVRLVVGLVVGLVISLVVGLVVGLGVGLVVRLVVGL 516
Query: 452 VCYYVIGLTVGCVLGFKTSLGVARSTMNLIVIYIGHLVG 490
V +GL V V+G LGV ++ + +G +VG
Sbjct: 515 VVGLGVGLVVRLVVGLVVGLGVGLVVSLVVCLVVGLVVG 399
Score = 30.8 bits (68), Expect = 1.3
Identities = 35/146 (23%), Positives = 65/146 (43%), Gaps = 1/146 (0%)
Frame = -1
Query: 346 VMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTS 405
++LG+G + VS +G V + V +V G L+ + +++ L VGL
Sbjct: 680 LVLGVGLVVCLVVSLVIGL----VVRLVVGLVVG---LVISLVVGLVVGLGVGL------ 540
Query: 406 DS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYV-NLVCYYVIGLTVGCV 464
V+ V L L + +++ + ++ G+ +G +V V LV +GL V V
Sbjct: 539 ---VVRLVVGLVVGLGVGLVVRLVVGLVVGLGVGLVVSLVVCLVVGLVVGLGVGLVVRLV 369
Query: 465 LGFKTSLGVARSTMNLIVIYIGHLVG 490
+G LGV ++ + + +VG
Sbjct: 368 IGLVVGLGVGLVVCLIVGLVVRLVVG 291
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.345 0.150 0.516
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,191,403
Number of Sequences: 36976
Number of extensions: 315121
Number of successful extensions: 3882
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2841
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 951
Number of HSP's gapped (non-prelim): 3067
length of query: 527
length of database: 9,014,727
effective HSP length: 101
effective length of query: 426
effective length of database: 5,280,151
effective search space: 2249344326
effective search space used: 2249344326
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 61 (28.1 bits)
Medicago: description of AC124972.9