Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC124972.9 + phase: 0 /pseudo
         (527 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC83102 similar to GP|11994404|dbj|BAB02363. gb|AAC28507.1~gene_...   147  7e-36
TC78456 similar to GP|11994404|dbj|BAB02363. gb|AAC28507.1~gene_...   144  6e-35
BQ149337 weakly similar to GP|13272459|gb unknown protein {Arabi...   129  3e-30
TC92785 weakly similar to GP|13937234|gb|AAK50109.1 AT5g38030/F1...   118  6e-27
BQ124842 weakly similar to GP|19310633|gb unknown protein {Arabi...    96  3e-20
TC80665 weakly similar to GP|19310633|gb|AAL85047.1 unknown prot...    92  6e-19
TC93253 weakly similar to GP|14030731|gb|AAK53040.1 AT5g65380/MN...    90  2e-18
BE320706 weakly similar to GP|23617058|db putative integral memb...    77  2e-14
BF639353 similar to GP|17979043|gb| unknown protein {Arabidopsis...    66  3e-11
BQ750943 weakly similar to GP|21627817|emb hypothetical protein ...    59  6e-09
CB894605 weakly similar to GP|22136880|gb| unknown protein {Arab...    47  1e-05
TC78455 similar to GP|11994404|dbj|BAB02363. gb|AAC28507.1~gene_...    45  9e-05
TC91120 similar to GP|11994404|dbj|BAB02363. gb|AAC28507.1~gene_...    43  3e-04
AW980583 weakly similar to GP|16797803|db hypothetical membrane ...    40  0.002
BI267034 weakly similar to PIR|T09556|T095 hypothetical protein ...    39  0.006
BG589013 weakly similar to GP|20805025|db contains EST D15170(C0...    38  0.011
TC81908 similar to GP|15810018|gb|AAL06936.1 AT5g38030/F16F17_30...    36  0.032
BE319359 similar to GP|19310633|gb| unknown protein {Arabidopsis...    33  0.21
BQ138336 similar to GP|17065360|gb Unknown protein {Arabidopsis ...    33  0.27
BG454776 weakly similar to PIR|T49896|T4 glycine/proline-rich pr...    33  0.27

>TC83102 similar to GP|11994404|dbj|BAB02363.
           gb|AAC28507.1~gene_id:MIL23.25~strong similarity to
           unknown protein {Arabidopsis thaliana}, partial (36%)
          Length = 1048

 Score =  147 bits (372), Expect = 7e-36
 Identities = 76/131 (58%), Positives = 95/131 (72%)
 Frame = +3

Query: 342 WDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSR 401
           W   + +G  AAASVRVSNELGA +P+ A FSV VV   S +ISVI A I+L LR  +S 
Sbjct: 228 WVFMISVGFNAAASVRVSNELGARNPKSASFSVKVVTVISFIISVIAALIVLALRDVISY 407

Query: 402 LFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTV 461
           +FT    V  AVSDL PLL++S++LNGIQP+LSGVA+GCGWQA VAYVN+ CYY+ G+ +
Sbjct: 408 VFTEGEVVAAAVSDLCPLLSLSLVLNGIQPVLSGVAVGCGWQAFVAYVNVGCYYIAGIPL 587

Query: 462 GCVLGFKTSLG 472
           G  LGF  + G
Sbjct: 588 GAGLGFYFNFG 620


>TC78456 similar to GP|11994404|dbj|BAB02363.
           gb|AAC28507.1~gene_id:MIL23.25~strong similarity to
           unknown protein {Arabidopsis thaliana}, partial (40%)
          Length = 920

 Score =  144 bits (364), Expect = 6e-35
 Identities = 75/147 (51%), Positives = 99/147 (67%)
 Frame = +1

Query: 326 DSPSKCTSIFSMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLIS 385
           DS S CT++       W   + +G  AAASVRVSNELGA + + A FSV VV   S +I 
Sbjct: 58  DSLSICTTVSG-----WTFMISVGFQAAASVRVSNELGAGNSKSASFSVVVVTVISFIIC 222

Query: 386 VIFAAIILILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQAL 445
            I A ++L LR  +S +FT    V  AVS+L+PLLA++++LNG+QP+LSGVA+GCGWQ  
Sbjct: 223 AIIALVVLALRDVISYVFTEGEEVAAAVSNLSPLLALAIVLNGVQPVLSGVAVGCGWQTF 402

Query: 446 VAYVNLVCYYVIGLTVGCVLGFKTSLG 472
           VAYVN+ CYY +G+ +G VLGF    G
Sbjct: 403 VAYVNVGCYYGLGIPLGAVLGFYFKFG 483


>BQ149337 weakly similar to GP|13272459|gb unknown protein {Arabidopsis
           thaliana}, partial (21%)
          Length = 622

 Score =  129 bits (324), Expect = 3e-30
 Identities = 72/139 (51%), Positives = 93/139 (66%)
 Frame = +2

Query: 352 AAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIE 411
           AAASVRV+NELG    R AKFS+ +    S  I  IF  I L L+  LS +FTSDS V  
Sbjct: 8   AAASVRVANELGRGSSRDAKFSIVINALTSFAIGFIFFLIFLFLKKKLSYIFTSDSDVAN 187

Query: 412 AVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSL 471
           AV DL+  LA+S+LLN +QP+LSGV++G GWQ++VAYVN+ CYY+IG+ VG V+G   +L
Sbjct: 188 AVGDLSFWLALSMLLNSVQPVLSGVSVGAGWQSIVAYVNIGCYYLIGIPVGVVIGVVYNL 367

Query: 472 GVARSTMNLIVIYIGHLVG 490
           G+         I+IG L G
Sbjct: 368 GIKG-------IWIGMLFG 403


>TC92785 weakly similar to GP|13937234|gb|AAK50109.1 AT5g38030/F16F17_30
           {Arabidopsis thaliana}, partial (30%)
          Length = 533

 Score =  118 bits (295), Expect = 6e-27
 Identities = 56/107 (52%), Positives = 77/107 (71%)
 Frame = +1

Query: 367 PRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLL 426
           PR A+FS+ V    S+LI ++ A +++I R      FT+D  V + V DLTPLLA+ V++
Sbjct: 1   PRTARFSLVVAVITSILIGLLLALVLIISRDKYPAYFTTDKEVQDLVKDLTPLLALCVVI 180

Query: 427 NGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSLGV 473
           N +QP+LSGVAIG GWQA VAYVN+ CYY+ G+ VG +LG+K +LGV
Sbjct: 181 NNVQPVLSGVAIGAGWQAAVAYVNIACYYLFGIPVGLILGYKVNLGV 321


>BQ124842 weakly similar to GP|19310633|gb unknown protein {Arabidopsis
           thaliana}, partial (31%)
          Length = 706

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 61/186 (32%), Positives = 92/186 (48%)
 Frame = +2

Query: 300 SISIWYVNNFSLNNVSCLFVNMLSNHDSPSKCTSIFSMNYLNWDMQVMLGLGAAASVRVS 359
           S+ +W      L  +S L  N +      S C + F + ++     +  G   A S+RVS
Sbjct: 92  SLKVWTFELMVL--MSGLLPNPVIETSVLSICLNTFGLAWM-----IPFGCSCAVSIRVS 250

Query: 360 NELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIEAVSDLTPL 419
           NELG  +P  A  +V V    S + ++     +++ R     L++ D  VI  VS + P+
Sbjct: 251 NELGGGNPNGASLAVRVALSISFIAALFMVLSMILARKVWGHLYSDDKQVIRYVSAMMPI 430

Query: 420 LAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSLGVARSTMN 479
           LAIS  L+ IQ  LSGV  GCGWQ + AYVNL  +YV+G+    VL F   +      + 
Sbjct: 431 LAISSFLDAIQSTLSGVLAGCGWQKIGAYVNLGSFYVVGVPCAVVLAFFVHMHAMGLWLG 610

Query: 480 LIVIYI 485
           +I  +I
Sbjct: 611 IISAFI 628


>TC80665 weakly similar to GP|19310633|gb|AAL85047.1 unknown protein
           {Arabidopsis thaliana}, partial (31%)
          Length = 894

 Score = 91.7 bits (226), Expect = 6e-19
 Identities = 44/113 (38%), Positives = 75/113 (65%)
 Frame = +3

Query: 360 NELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTSDS*VIEAVSDLTPL 419
           NELGA +PR A+ +V+VV   +++ S++  A+I+++R      ++++  V++ V+ + P+
Sbjct: 3   NELGAGNPRAARLAVYVVVVIAIIESIVVGAVIILIRNIWGYAYSNEEEVVKYVAIMLPI 182

Query: 420 LAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSLG 472
           +A+S  L+GIQ +LSG A G GWQ + AYVNL  YY++G+    VL F   +G
Sbjct: 183 IAVSNFLDGIQSVLSGTARGVGWQKIGAYVNLGSYYLVGIPAAVVLAFVLHVG 341


>TC93253 weakly similar to GP|14030731|gb|AAK53040.1 AT5g65380/MNA5_11
           {Arabidopsis thaliana}, partial (25%)
          Length = 633

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 40/72 (55%), Positives = 58/72 (80%)
 Frame = +2

Query: 402 LFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTV 461
           +FT+   V+EAV+D++ LLA+++LLN +QPILSGVA+G GWQ  VAYVN+ CYY+IGL +
Sbjct: 29  IFTTSPPVLEAVNDMSILLAVTILLNSVQPILSGVAVGSGWQVFVAYVNIGCYYLIGLPL 208

Query: 462 GCVLGFKTSLGV 473
           G ++G+  + GV
Sbjct: 209 GILMGWVFNTGV 244


>BE320706 weakly similar to GP|23617058|db putative integral membrane protein
           {Oryza sativa (japonica cultivar-group)}, partial (18%)
          Length = 330

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 43/98 (43%), Positives = 59/98 (59%)
 Frame = +2

Query: 346 VMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTS 405
           ++ GL AAAS RVSNELGA  P  AK ++ V    S+L+   FA +I+       RLF+S
Sbjct: 35  IIYGLSAAASTRVSNELGAGQPERAKHAMRVSLKLSILLGFCFALMIVFGHGIWIRLFSS 214

Query: 406 DS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQ 443
              +    + + P LAIS+LL+ +Q +LSGV   CGWQ
Sbjct: 215 SPTIKHEFASIAPFLAISILLDSVQGVLSGVVKACGWQ 328


>BF639353 similar to GP|17979043|gb| unknown protein {Arabidopsis thaliana},
           partial (16%)
          Length = 551

 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 28/46 (60%), Positives = 36/46 (77%)
 Frame = +1

Query: 426 LNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVLGFKTSL 471
           L+ +Q +LSGVA GCGWQ L  YVNL  +Y+IGL + C+LGFKT+L
Sbjct: 1   LDSVQGVLSGVARGCGWQHLTVYVNLATFYLIGLPISCLLGFKTNL 138


>BQ750943 weakly similar to GP|21627817|emb hypothetical protein {Aspergillus
           fumigatus}, partial (7%)
          Length = 711

 Score = 58.5 bits (140), Expect = 6e-09
 Identities = 37/123 (30%), Positives = 61/123 (49%)
 Frame = -1

Query: 345 QVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFT 404
           Q+   +  AAS R++N +GA     AK +  V  G ++ + V    +   LR  L RLF+
Sbjct: 708 QIPFPVSIAASTRIANLIGAGLVDAAKTTGKVAFGAALTVGVFNVILFGGLRFHLPRLFS 529

Query: 405 SDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCV 464
           +D  VI  V+++ PL A+  + +G+     G+  G G  ++  Y NL  YY + L +   
Sbjct: 528 NDEEVIAIVANVLPLCAVMQVFDGLAAGAHGLLRGIGRPSIGGYANLAVYYGVALPLSFS 349

Query: 465 LGF 467
             F
Sbjct: 348 TAF 340


>CB894605 weakly similar to GP|22136880|gb| unknown protein {Arabidopsis
           thaliana}, partial (12%)
          Length = 183

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 25/55 (45%), Positives = 30/55 (54%)
 Frame = +1

Query: 342 WDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILR 396
           W+M + LG  AAASVRVSNELG    + AKFS+ V    S+ I        L  R
Sbjct: 1   WEMMISLGFMAAASVRVSNELGKGSEKAAKFSIVVTGLTSLGIGSFLFLFFLFFR 165


>TC78455 similar to GP|11994404|dbj|BAB02363.
           gb|AAC28507.1~gene_id:MIL23.25~strong similarity to
           unknown protein {Arabidopsis thaliana}, partial (48%)
          Length = 1060

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
 Frame = +2

Query: 74  YFVDI*DL*SLLEHP*PLLEFKVLLMALC*EWQVQCKMYVDKLMEPKNMQQCASLCKEHS 133
           YF+ I  + SLL  P  ++  K LLM  C  W V  + YVDK +E KNM+  A +CK+  
Sbjct: 290 YFLVILVIWSLLLLPLEIMVSKYLLMDSCWAWGVLLRHYVDKHLEQKNMKC*AYICKDQQ 469

Query: 134 SYILVQQSF*HFSIGSPEIF*KS*DRRRA*PCKVKCSLMDLFLNSMHLHSAVP------C 187
            +      F*     SP  F*  *+  +      K      FL+ +  H  +P       
Sbjct: 470 CFSQ*PV*F*Q*YTYSPNQF*YF*ENHQ------KLHQQHPFLSLV*SHKYLPML*TFQS 631

Query: 188 RGFFKHR 194
           + FFKH+
Sbjct: 632 KNFFKHK 652


>TC91120 similar to GP|11994404|dbj|BAB02363.
           gb|AAC28507.1~gene_id:MIL23.25~strong similarity to
           unknown protein {Arabidopsis thaliana}, partial (35%)
          Length = 665

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 39/111 (35%), Positives = 50/111 (44%), Gaps = 7/111 (6%)
 Frame = +1

Query: 94  FKVLLMALC*EWQVQCKMYVDKLMEPKNMQQCASLCKEHSSYILVQQSF*HFSIGSPEIF 153
           FK LLM  C  W+VQ + YVDK ME KNM      C EH      QQ F*   + S ++F
Sbjct: 322 FKSLLMVSCWVWEVQLRHYVDKHMEQKNM-----AC*EH--IYKDQQFF*Q*PVFSSQLF 480

Query: 154 -------*KS*DRRRA*PCKVKCSLMDLFLNSMHLHSAVPCRGFFKHRTLF 197
                  * S D  + *  +     MDL    + +      + FFKH+  F
Sbjct: 481 TY*VNQS*YSLDNHQE*LLQQHFLCMDLSHKYLLMQ*ISQSKNFFKHKV*F 633


>AW980583 weakly similar to GP|16797803|db hypothetical membrane protein-1
           {Marchantia polymorpha}, partial (21%)
          Length = 631

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 25/72 (34%), Positives = 40/72 (54%), Gaps = 2/72 (2%)
 Frame = +3

Query: 327 SPSKCTSIFS--MNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLI 384
           +P   TS+ +  MN  +    +  G   AAS+RVSNELGA +PR A  +V VV   ++  
Sbjct: 402 NPKLQTSVLAICMNIASVVWMLSSGFTGAASIRVSNELGAGNPRAAHLAVCVVVVLNITE 581

Query: 385 SVIFAAIILILR 396
           +     ++++LR
Sbjct: 582 AFFVGTVMILLR 617


>BI267034 weakly similar to PIR|T09556|T095 hypothetical protein L73G19.20 -
           Arabidopsis thaliana, partial (13%)
          Length = 428

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 25/74 (33%), Positives = 38/74 (50%), Gaps = 2/74 (2%)
 Frame = +3

Query: 91  LLEFK--VLLMALC*EWQVQCKMYVDKLMEPKNMQQCASLCKEHSSYILVQQSF*HFSIG 148
           L+ FK  VL    C EW+++C+ +VDK M  KNM+    + K+H  +      F    + 
Sbjct: 126 LVSFKEGVLFFLFCWEWRLRCQPFVDKHMVQKNME*WEYIFKDHG*FYS*LHLFFFLCLS 305

Query: 149 SPEIF*KS*DRRRA 162
           S   F* S* + +A
Sbjct: 306 SQPRF*HS*AKMKA 347


>BG589013 weakly similar to GP|20805025|db contains EST D15170(C0202)~unknown
           protein {Oryza sativa (japonica cultivar-group)},
           partial (42%)
          Length = 786

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
 Frame = +1

Query: 327 SPSKCTSIFS--MNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFV 376
           +P   TS+ S  +N  +    +   +GA+AS RVSNELGA +P+ AK +V V
Sbjct: 541 NPQLETSVLSVCLNTTSLHFFIPYAIGASASTRVSNELGAGNPKTAKGAVRV 696


>TC81908 similar to GP|15810018|gb|AAL06936.1 AT5g38030/F16F17_30
           {Arabidopsis thaliana}, partial (41%)
          Length = 499

 Score = 36.2 bits (82), Expect = 0.032
 Identities = 22/62 (35%), Positives = 30/62 (47%)
 Frame = +3

Query: 99  MALC*EWQVQCKMYVDKLMEPKNMQQCASLCKEHSSYILVQQSF*HFSIGSPEIF*KS*D 158
           +A C  W+ + K YVDK  E +N       CK+H  Y         F   SP+ F* S*D
Sbjct: 306 LA*CLGWEARSKHYVDKQ*EQENSTC*EYTCKDHG*YYFPWHFHYAFYTSSPDPF*NS*D 485

Query: 159 RR 160
           ++
Sbjct: 486 KQ 491


>BE319359 similar to GP|19310633|gb| unknown protein {Arabidopsis thaliana},
           partial (20%)
          Length = 313

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
 Frame = +2

Query: 327 SPSKCTSIFSMNY----LNWDMQVMLGLGAAASVRVSNELGAAHPR 368
           +P   TS+ S++     L W   +  GL  A S+RVSNELGA +PR
Sbjct: 179 NPKLETSVLSISLNTSALVW--MIPFGLSGAISIRVSNELGAGNPR 310


>BQ138336 similar to GP|17065360|gb Unknown protein {Arabidopsis thaliana},
           partial (20%)
          Length = 536

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
 Frame = +2

Query: 91  LLEFKVLL----MALC*EWQVQCKMYVDKLMEPKNMQQCASLCKEHSSYILVQQSF*HFS 146
           LL F + L    M    EW+++C+ +VDK M  KNM+    + K+H  +      F    
Sbjct: 227 LLLFSLFLLGSPMVFSWEWRLRCQPFVDKHMVQKNME*WEYIFKDHG*FYS*LHLFFFLC 406

Query: 147 IGSPEIF*KS*DRRRA 162
           + S   F* S* + +A
Sbjct: 407 LSSQPRF*HS*AKMKA 454


>BG454776 weakly similar to PIR|T49896|T4 glycine/proline-rich protein -
           Arabidopsis thaliana, partial (7%)
          Length = 680

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
 Frame = -1

Query: 393 LILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYV-NL 451
           L+L VGL         V+  V  L   L + +++  +  ++ G+ +G G   +V  V  L
Sbjct: 680 LVLGVGLVVCL-----VVSLVIGLVVRLVVGLVVGLVISLVVGLVVGLGVGLVVRLVVGL 516

Query: 452 VCYYVIGLTVGCVLGFKTSLGVARSTMNLIVIYIGHLVG 490
           V    +GL V  V+G    LGV      ++ + +G +VG
Sbjct: 515 VVGLGVGLVVRLVVGLVVGLGVGLVVSLVVCLVVGLVVG 399



 Score = 30.8 bits (68), Expect = 1.3
 Identities = 35/146 (23%), Positives = 65/146 (43%), Gaps = 1/146 (0%)
 Frame = -1

Query: 346 VMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTS 405
           ++LG+G    + VS  +G     V +  V +V G   L+  +   +++ L VGL      
Sbjct: 680 LVLGVGLVVCLVVSLVIGL----VVRLVVGLVVG---LVISLVVGLVVGLGVGL------ 540

Query: 406 DS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYV-NLVCYYVIGLTVGCV 464
              V+  V  L   L + +++  +  ++ G+ +G     +V  V  LV    +GL V  V
Sbjct: 539 ---VVRLVVGLVVGLGVGLVVRLVVGLVVGLGVGLVVSLVVCLVVGLVVGLGVGLVVRLV 369

Query: 465 LGFKTSLGVARSTMNLIVIYIGHLVG 490
           +G    LGV      ++ + +  +VG
Sbjct: 368 IGLVVGLGVGLVVCLIVGLVVRLVVG 291


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.345    0.150    0.516 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,191,403
Number of Sequences: 36976
Number of extensions: 315121
Number of successful extensions: 3882
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2841
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 951
Number of HSP's gapped (non-prelim): 3067
length of query: 527
length of database: 9,014,727
effective HSP length: 101
effective length of query: 426
effective length of database: 5,280,151
effective search space: 2249344326
effective search space used: 2249344326
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 61 (28.1 bits)


Medicago: description of AC124972.9