BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124972.13 - phase: 0
(935 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC85648 similar to GP|20197419|gb|AAC77862.2 Argonaute (AGO1)-li... 1844 0.0
TC78201 similar to GP|20197419|gb|AAC77862.2 Argonaute (AGO1)-li... 1171 0.0
TC77199 similar to SP|O04379|AGO1_ARATH Argonaute protein. [Mous... 426 e-124
TC86840 similar to PIR|H86438|H86438 protein T19E23.7 [imported]... 320 2e-87
AL389157 similar to GP|6539559|dbj ESTs AU068544(C30430) C98487(... 313 2e-85
BF641514 weakly similar to GP|20197419|gb Argonaute (AGO1)-like ... 276 4e-79
TC90260 homologue to SP|Q9XGW1|PINH_ARATH PINHEAD protein (ZWILL... 183 2e-72
BI311950 similar to GP|20197419|gb| Argonaute (AGO1)-like protei... 226 2e-59
TC85647 similar to GP|6539559|dbj|BAA88176.1 ESTs AU068544(C3043... 221 1e-57
TC90557 similar to SP|O04379|AGO1_ARATH Argonaute protein. [Mous... 107 2e-23
BI309506 similar to GP|12597784|gb pinhead-like protein {Arabido... 105 6e-23
BQ149740 similar to GP|21280323|db AGO1 homologous protein {Oryz... 104 1e-22
BI271909 similar to SP|Q9XGW1|PINH PINHEAD protein (ZWILLE prote... 87 1e-19
TC93345 similar to SP|Q9SJK3|AGOL_ARATH Argonaute-like protein A... 90 4e-18
TC80433 similar to GP|8778710|gb|AAF79718.1| T1N15.2 {Arabidopsi... 53 6e-07
AW693202 similar to GP|12597784|gb| pinhead-like protein {Arabid... 45 2e-04
TC85502 homologue to SP|P27990|PALY_MEDSA Phenylalanine ammonia-... 30 3.3
TC93205 similar to PIR|A86309|A86309 hypothetical protein AAD500... 30 4.3
TC79555 homologue to GP|10567859|gb|AAG18593.1 L8019.5 {Leishman... 30 4.3
BE941307 homologue to GP|21280323|dbj AGO1 homologous protein {O... 26 5.0
>TC85648 similar to GP|20197419|gb|AAC77862.2 Argonaute (AGO1)-like protein
{Arabidopsis thaliana}, partial (90%)
Length = 3118
Score = 1844 bits (4776), Expect = 0.0
Identities = 912/929 (98%), Positives = 915/929 (98%)
Frame = +3
Query: 7 FSIHYLLFQLFFLMVMCSVQEMGSQENEECLPPPPPIVPADIEPIKIEPQIVKKKLPTKV 66
F+ L F + +EMGSQENEECLPPPPPIVPADIEPIKIEPQIVKKKLPTKV
Sbjct: 12 FTAQNTLHSFFSFLSQTFFKEMGSQENEECLPPPPPIVPADIEPIKIEPQIVKKKLPTKV 191
Query: 67 PMARRGLGSKGAKLPLLTNHFKVNVTNTDGYFFQYSVALFYEDGRPVEGKGAGRKILDRV 126
PMARRGLGSKGAKLPLLTNHFKVNVTNTDGYFFQYSVALFYEDGRPVEGKGAGRKILDRV
Sbjct: 192 PMARRGLGSKGAKLPLLTNHFKVNVTNTDGYFFQYSVALFYEDGRPVEGKGAGRKILDRV 371
Query: 127 QETYGSELNGKDLAYDGEKTLFTIGSLAQNKLEFTVVLEDVTSNRNNGNASPDGHGSPND 186
QETYGSELNGKDLAYDGEKTLFTIGSLAQNKLEFTVVLEDVTSNRNNGNASPDGHGSPND
Sbjct: 372 QETYGSELNGKDLAYDGEKTLFTIGSLAQNKLEFTVVLEDVTSNRNNGNASPDGHGSPND 551
Query: 187 TDRKRLKKSHRSKTYKVEISFASKIPLQAIANALKGHETENYQEAIRVLDIILRQHAAKQ 246
TDRKRLKKSHRSKTYKVEISFASKIPLQAIANALKGHETENYQEAIRVLDIILRQHAAKQ
Sbjct: 552 TDRKRLKKSHRSKTYKVEISFASKIPLQAIANALKGHETENYQEAIRVLDIILRQHAAKQ 731
Query: 247 GCLLVRQNFFHNDPKNFTDVGGGVLGCRGLHSSFRTTQSGLSLNIDVSTTMIVHPGPVVD 306
GCLLVRQNFFHNDPKNFTDVGGGVLGCRGLHSSFRTTQSGLSLNIDVSTTMIVHPGPVVD
Sbjct: 732 GCLLVRQNFFHNDPKNFTDVGGGVLGCRGLHSSFRTTQSGLSLNIDVSTTMIVHPGPVVD 911
Query: 307 FLIANQNVRDPFSLDWNKAKRTLKNLRITTSPTNQEYKITGLSEMPCKDQLFTLKKRGAV 366
FLIANQNVRDPFSLDWNKAKRTLKNLRITTSPTNQEYKITGLSEMPCKDQLFTLKKRGAV
Sbjct: 912 FLIANQNVRDPFSLDWNKAKRTLKNLRITTSPTNQEYKITGLSEMPCKDQLFTLKKRGAV 1091
Query: 367 PGEDDTEEITVYDYFVNRRKISLQYSADLPCINVGKPKRPTFVPVELCSLVSLQRYTKAL 426
PGEDDTEEITVYDYFVNRRKISLQYSADLPCINVGKPKRPTFVPVELCSLVSLQRYTKAL
Sbjct: 1092PGEDDTEEITVYDYFVNRRKISLQYSADLPCINVGKPKRPTFVPVELCSLVSLQRYTKAL 1271
Query: 427 STLQRSSLVEKSRQKPQERMRVLTDALKTSDYGSEPMLRNCGISITSGFTQVDGRVLQAP 486
STLQRSSLVEKSRQKPQERMRVLTDALKTSDYGSEPMLRNCGISITSGFTQVDGRVLQAP
Sbjct: 1272STLQRSSLVEKSRQKPQERMRVLTDALKTSDYGSEPMLRNCGISITSGFTQVDGRVLQAP 1451
Query: 487 RLKFGNGEDFNPRNGRWNFNNKKIVQPVKIEKWAVVNFSARCDVRGLVRDLIKCGGMKGI 546
RLKFGNGEDFNPRNGRWNFNNKKIVQPVKIEKWAVVNFSARCDVRGLVRDLIKCGGMKGI
Sbjct: 1452RLKFGNGEDFNPRNGRWNFNNKKIVQPVKIEKWAVVNFSARCDVRGLVRDLIKCGGMKGI 1631
Query: 547 HVEQPFDCFEENGQFRRAPPLVRVEKMFEHVQSKLPGAPKFLLCLLSERKNSDLYGPWKK 606
HVEQPFDCFEENGQFRRAPPLVRVEKMFEHVQSKLPGAPKFLLCLLSERKNSDLYGPWKK
Sbjct: 1632HVEQPFDCFEENGQFRRAPPLVRVEKMFEHVQSKLPGAPKFLLCLLSERKNSDLYGPWKK 1811
Query: 607 KNLAEFGIVTQCIAPTRVNDQYLTNVLLKINAKLGGMNSLLGVEHSPSIPIVSKAPTLIL 666
KNLAEFGIVTQCIAPTRVNDQYLTNVLLKINAKLGGMNSLLGVEHSPSIPIVSKAPTLIL
Sbjct: 1812KNLAEFGIVTQCIAPTRVNDQYLTNVLLKINAKLGGMNSLLGVEHSPSIPIVSKAPTLIL 1991
Query: 667 GMDVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSDTEDEG 726
GMDVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSDTEDEG
Sbjct: 1992GMDVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSDTEDEG 2171
Query: 727 IIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDEKWNPKFL 786
IIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDEKWNPKFL
Sbjct: 2172IIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDEKWNPKFL 2351
Query: 787 VIVAQKNHHTKFFQPGSPDNVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLL 846
VIVAQKNHHTKFFQPGSPDNVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLL
Sbjct: 2352VIVAQKNHHTKFFQPGSPDNVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLL 2531
Query: 847 DEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSH 906
DEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSH
Sbjct: 2532DEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSH 2711
Query: 907 GGSGRDINASPIPQLPKLMDSVCNSMFFV 935
GGSGRDINASPIPQLPKLMDSVCNSMFFV
Sbjct: 2712GGSGRDINASPIPQLPKLMDSVCNSMFFV 2798
>TC78201 similar to GP|20197419|gb|AAC77862.2 Argonaute (AGO1)-like protein
{Arabidopsis thaliana}, partial (71%)
Length = 2047
Score = 1171 bits (3029), Expect = 0.0
Identities = 566/682 (82%), Positives = 619/682 (89%), Gaps = 1/682 (0%)
Frame = +3
Query: 255 FFHNDPKNFTDVGGGVLGCRGLHSSFRTTQSGLSLNIDVSTTMIVHPGPVVDFLIANQNV 314
FFHNDPKNF DVGGGVLGCRG HSSFR TQSGLSLNIDVSTTMI+ PGPVVDFLI+NQNV
Sbjct: 3 FFHNDPKNFADVGGGVLGCRGFHSSFRATQSGLSLNIDVSTTMIIQPGPVVDFLISNQNV 182
Query: 315 RDPFSLDWNKAKRTLKNLRITTSPTNQEYKITGLSEMPCKDQLFTLKKRGAVPGEDDTEE 374
RDPF +DW KAKRTLKNLR+ T P+NQE+KI GLSE+PCK+ FTLKKR D T+E
Sbjct: 183 RDPFQIDWGKAKRTLKNLRVKTHPSNQEWKICGLSEVPCKELTFTLKKRDG----DGTDE 350
Query: 375 ITVYDYFVNRRKISLQYSADLPCINVGKPKRPTFVPVELCSLVSLQRYTKALSTLQRSSL 434
+TV DYF N RKI L+YSADLPCINVG+PKRPT+ P+ELC LVSLQRYTKALSTLQR+SL
Sbjct: 351 MTVLDYFTNVRKIDLRYSADLPCINVGRPKRPTYFPIELCELVSLQRYTKALSTLQRASL 530
Query: 435 VEKSRQKPQERMRVLTDALKTSDYGSEPMLRNCGISITSGFTQVDGRVLQAPRLKFGNGE 494
VEKSRQKPQERMR+L+DALKTS+YG+EP+L++CGISI++GFTQV+GRVL AP+LKFGNGE
Sbjct: 531 VEKSRQKPQERMRILSDALKTSNYGAEPLLQSCGISISTGFTQVEGRVLPAPKLKFGNGE 710
Query: 495 DFNPRNGRWNFNNKKIVQPVK-IEKWAVVNFSARCDVRGLVRDLIKCGGMKGIHVEQPFD 553
DF PRNGRWNFNNKK VQP K IEKWAV NFSARCDVRGLVRD+I+ G MKGI ++QPFD
Sbjct: 711 DFTPRNGRWNFNNKKFVQPTKKIEKWAVANFSARCDVRGLVRDIIRIGNMKGIMIDQPFD 890
Query: 554 CFEENGQFRRAPPLVRVEKMFEHVQSKLPGAPKFLLCLLSERKNSDLYGPWKKKNLAEFG 613
FEEN QFRRAPP+VRVEKMFE +QSKLPGAP+FLLCLL +RKN D+YGPWKKKNLA+FG
Sbjct: 891 VFEENPQFRRAPPMVRVEKMFEDIQSKLPGAPQFLLCLLPDRKNCDIYGPWKKKNLADFG 1070
Query: 614 IVTQCIAPTRVNDQYLTNVLLKINAKLGGMNSLLGVEHSPSIPIVSKAPTLILGMDVSHG 673
IV QC+ P RVND YL N++LKINAKLGG+NSLLGVE SPS+PIVSKAPTLILGMDVSHG
Sbjct: 1071IVNQCMCPLRVNDNYLGNIMLKINAKLGGLNSLLGVESSPSLPIVSKAPTLILGMDVSHG 1250
Query: 674 SPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSDTEDEGIIRELLI 733
SPGQT+IPSIAAVVSSRQWPLISKYRACVRTQ AKVEMIDNLFK VSDTEDEGI+RELL+
Sbjct: 1251SPGQTDIPSIAAVVSSRQWPLISKYRACVRTQSAKVEMIDNLFKKVSDTEDEGIMRELLL 1430
Query: 734 DFYNSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDEKWNPKFLVIVAQKN 793
DFY SS NRKPDNIIIFRDGVSESQFNQVLNIEL QIIEACKFLDE W PKF+VIVAQKN
Sbjct: 1431DFYTSSKNRKPDNIIIFRDGVSESQFNQVLNIELDQIIEACKFLDENWTPKFVVIVAQKN 1610
Query: 794 HHTKFFQPGSPDNVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSP 853
HHT+FFQP SPDNVPPGTV+DNKICHPRNYDFY+CAHAGMIGTSRPTHYHVLLDEIGFSP
Sbjct: 1611HHTRFFQPNSPDNVPPGTVIDNKICHPRNYDFYLCAHAGMIGTSRPTHYHVLLDEIGFSP 1790
Query: 854 DDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSHGGSGRDI 913
D+LQEL HSLSYVYQRSTTAISVVAPICYAHLAA+Q+GQFMKFEDKSETSSSHGG
Sbjct: 1791DELQELGHSLSYVYQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETSSSHGGLSA-A 1967
Query: 914 NASPIPQLPKLMDSVCNSMFFV 935
A P+P LPKL D+VCN MFFV
Sbjct: 1968GAVPVPXLPKLQDNVCNXMFFV 2033
>TC77199 similar to SP|O04379|AGO1_ARATH Argonaute protein. [Mouse-ear
cress] {Arabidopsis thaliana}, partial (74%)
Length = 2714
Score = 426 bits (1094), Expect(2) = e-124
Identities = 265/710 (37%), Positives = 389/710 (54%), Gaps = 50/710 (7%)
Frame = +2
Query: 275 GLHSSFRTTQSGLSLNIDVSTTMIVHPGPVVDFL--IANQNV--RDPFSLDWNKAKRTLK 330
G + S R TQ GLSLNID+S+T + P PV++F+ + N++V R D K K+ L+
Sbjct: 293 GFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVTQLLNRDVSARPLSDADRVKIKKALR 472
Query: 331 NLRITTSPTN---QEYKITGLSEMPCKDQLFTLKKRGAVPGEDDTEEITVYDYFVNRRKI 387
+++ + ++Y+I GL+ ++ F + +RG + +V +YF
Sbjct: 473 GIKVEVTHRGNMRRKYRIAGLTSQATRELTFPVDERGTMK--------SVVEYFFETYGF 628
Query: 388 SLQYSADLPCINVGKPKRPTFVPVELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMR 447
+Q++ PC+ VG P+RP ++P+E+C +V QRY+K L+ Q ++L++ + Q+P +R R
Sbjct: 629 VIQHT-QWPCLQVGNPQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPLDRER 805
Query: 448 VLTDALKTSDYGSEPMLRNCGISITSGFTQVDGRVLQAPRLKF---GNGEDFNPRNGRWN 504
+ + + Y +P + GI I+ QV+ R+L AP LK+ G +D P+ G+WN
Sbjct: 806 DIMQTVHHNAYHEDPYAKEFGIKISDRLAQVEARILPAPWLKYNDTGREKDCLPQVGQWN 985
Query: 505 FNNKKIVQPVKIEKWAVVNFSARCDVRGLVRDLIKCGGMKGIHVEQPFDCFEENGQFRRA 564
NKK+ ++ W VNFS V+D + +G E C+ +F
Sbjct: 986 MMNKKMFNGGSVKYWLCVNFSRT------VQDSVA----RGFCYELAQMCYVSGMEFNAE 1135
Query: 565 PPLV-------RVEKMFEH----VQSKLPGAPKF-LLCLLSERKNSDLYGPWKKKNLAEF 612
P + +VEK+ ++ +SK+P + LL ++ N LYG K+ +
Sbjct: 1136PVVPALTARPDQVEKVLKNRYHDAKSKMPKDKELDLLIVILPDNNGSLYGDLKRICETDL 1315
Query: 613 GIVTQCIAPTRV---NDQYLTNVLLKINAKLGGMNSLLGVEHSPSIPIVSKAPTLILGMD 669
G+V+QC V + QYL NV LKIN K+GG N++L S IP+VS PT+I G D
Sbjct: 1316GVVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGAD 1495
Query: 670 VSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVEMIDNLFK----PVSDTEDE 725
V+H PG+ PSIAAVV+S+ WP I+KY V Q + E+I +LFK PV T
Sbjct: 1496VTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQDPVRGTLTG 1675
Query: 726 GIIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDEKWNPKF 785
G+I+ELLI F ++G +KP II +RDGVSE QF QVL EL I +AC L+ + P
Sbjct: 1676GMIKELLISFRRATG-QKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPV 1852
Query: 786 LVIVAQKNHHTKFFQPGSPD--------NVPPGTVVDNKICHPRNYDFYMCAHAGMIGTS 837
+V QK HHT+ F D N+ PGTVVD+KICHP +DFY+C+HAG+ GTS
Sbjct: 1853TFVVVQKRHHTRLFASNHQDKSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTS 2032
Query: 838 RPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFE 897
RP HYHVL DE FS D LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ E
Sbjct: 2033RPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPE 2212
Query: 898 DKSETSS-----SHGGSGRDINAS--------PIPQLPKLMDSVCNSMFF 934
S S GG+G + S + LP L D+V MF+
Sbjct: 2213TSDSGSMTSGAVSRGGAGAAVGRSTRAPGANAAVRPLPALKDNVKKVMFY 2362
Score = 40.8 bits (94), Expect(2) = e-124
Identities = 24/74 (32%), Positives = 42/74 (56%)
Frame = +1
Query: 197 RSKTYKVEISFASKIPLQAIANALKGHETENYQEAIRVLDIILRQHAAKQGCLLVRQNFF 256
R + +KV I A++ L + L+G +T+ QEA++VLDI+LR+ + C V ++F+
Sbjct: 61 RDREFKVVIKLAARADLHHLGLFLEGRQTDAPQEALQVLDIVLRELPTSRYC-PVGRSFY 237
Query: 257 HNDPKNFTDVGGGV 270
D +G G+
Sbjct: 238 SPDLGRRQPLGEGL 279
>TC86840 similar to PIR|H86438|H86438 protein T19E23.7 [imported] -
Arabidopsis thaliana, partial (34%)
Length = 2940
Score = 320 bits (820), Expect = 2e-87
Identities = 242/787 (30%), Positives = 386/787 (48%), Gaps = 45/787 (5%)
Frame = +3
Query: 194 KSHRSKTYKVEISFASKIPLQAIANALKGHETENYQEAIRVLDIILRQHAAKQGCLLVRQ 253
+ R+ +Y V I+ +K+ L+ + + L G+ ++ ++ +D++++++ A++ L R
Sbjct: 306 EDERAVSYTVTITLVNKLELRKLRDYLSGNVYSIPRDILQGMDLVVKENPARRTVSLGRC 485
Query: 254 NFFHNDPKNFTDVGGGVLGCRGLHSSFRTTQSGLSLNIDVSTTMIVHPGPVVDFLIANQN 313
F N P D+ G++ G S +TT GL+L +D S V+DFL + +
Sbjct: 486 FFPTNPPLIQRDLEPGIIAIGGFQHSLKTTAQGLALCLDYSVLSFRKKMSVLDFL--HDH 659
Query: 314 VRDPFSLDWNKAKRTLKNL------RITTSPTNQEYKITGLSEMPCKDQLFTLKKRGAVP 367
+R ++ K K+ ++ + +T T Q+Y I L++ + F + +
Sbjct: 660 IRGFNLAEFRKYKKFVEEVLLGLKVNVTHRRTKQKYTIAKLTDKDTRHITFPILDQ---E 830
Query: 368 GEDDTEEITVYDYFVNRRKISLQYSADLPCINVGKPKRPTFVPVELCSLVSLQRYTKA-L 426
G+ ++ YF ++ +Q+ D+P ++ G K FVP+ELC LV QR+ K L
Sbjct: 831 GQTPPRSTSLLAYFKDKHNYDIQHK-DIPALDFGGNKT-NFVPMELCVLVEGQRFPKEYL 1004
Query: 427 STLQRSSLVEKSRQKPQERMRVLTDALKTSDYG-SEPMLRNCGISITSGFTQVDGRVLQA 485
+L P++R + +K+SD +L+N G+++ + T V GRV+
Sbjct: 1005 DKNAAKNLKNMCLASPRDRESTIQMMMKSSDGPCGGGILQNFGMNVNTSMTNVTGRVIGP 1184
Query: 486 PRLKFGNGED------FNPRNGRWNFNNKKIVQPVKIEKWAVVNFSAR----CDVRG--L 533
P LK G+ +P WN K +V+ +E W +++F++ C +RG
Sbjct: 1185 PMLKLGDPRGKSTPMKLDPEKCHWNLVGKSMVEGKAVECWGILDFTSDAPNWCKLRGNQF 1364
Query: 534 VRDLIKCGGMKGIHVEQP----FDCFEENGQFRRAPPLVRVEKMFEHVQSKLPGAPKFLL 589
V +L+ GI + +P + + G + L+ EK+ E VQ K +FLL
Sbjct: 1365 VNNLMDKYRKLGIVMNEPVWHEYSAMWKLGDYNLLCELL--EKINEKVQKKCRRRLQFLL 1538
Query: 590 CLLSERKNSDLYGPWKKKNLAEFGIVTQCIAPTRVN---DQYLTNVLLKINAKLGGMNSL 646
C+++ + W + + GIVTQC N DQYLTN+ LKINAK+GG N
Sbjct: 1539 CVMANKDPGYKSLKWIAET--KVGIVTQCCLSGNANEGKDQYLTNLALKINAKIGGSN-- 1706
Query: 647 LGVEHSPSIP-IVSKAPTLILGMDVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQ 705
VE +P ++ + +G DV+H T PSI AVV++ WP ++Y A V Q
Sbjct: 1707 --VELINRLPHFEDESHVMFIGADVNHPGSRDTNSPSIVAVVATTNWPAANRYAARVCAQ 1880
Query: 706 GAKVEMIDNLFKPVSDTEDEGIIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLNI 765
E I N + D L+ Y +P I+IFRDGVSESQF+ VL
Sbjct: 1881 EHCTEKILNFGEICLD----------LVRHYEKLNKVRPQKIVIFRDGVSESQFHMVLGE 2030
Query: 766 ELSQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPDNVP-----PGTVVDNKICHP 820
EL + F + P +IVAQK H T+ F G + P PGTVVD K+ HP
Sbjct: 2031 ELKDLKTV--FQHSNYFPTITLIVAQKRHQTRLFPAGVREGAPSGNVFPGTVVDTKVVHP 2204
Query: 821 RNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPI 880
+DFY+C+H G +GTS+PTHYHVL DE F+ D+LQ+L++ + + + R T +S+V P+
Sbjct: 2205 FEFDFYLCSHYGSLGTSKPTHYHVLWDEHRFTSDNLQKLIYDMCFTFARCTKPVSLVPPV 2384
Query: 881 CYAHLAASQVGQFMKFEDKSETSSSH---GGSGRDINASPI---------PQLPKLMDSV 928
YA LAA + G+ + +E K T S + S + +S I P KL
Sbjct: 2385 YYADLAAYR-GR-LYYEAKMSTQSPYSTVSSSSSPLASSSISSTASISNDPGFYKLHPDT 2558
Query: 929 CNSMFFV 935
N MFFV
Sbjct: 2559 ENGMFFV 2579
>AL389157 similar to GP|6539559|dbj ESTs AU068544(C30430) C98487(E0325)
D23445(C2825) AU068543(C30430) C71774(E0325)
D22458(C11152), partial (18%)
Length = 498
Score = 313 bits (802), Expect = 2e-85
Identities = 164/187 (87%), Positives = 164/187 (87%)
Frame = +3
Query: 591 LLSERKNSDLYGPWKKKNLAEFGIVTQCIAPTRVNDQYLTNVLLKINAKLGGMNSLLGVE 650
LLSERKNSDLYGPWKKKNLAEFGIVTQCIAPTR NDQYLTNVLLKINAKLGGMNSLLGVE
Sbjct: 3 LLSERKNSDLYGPWKKKNLAEFGIVTQCIAPTRXNDQYLTNVLLKINAKLGGMNSLLGVE 182
Query: 651 HSPSIPIVSKAPTLILGMDVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVE 710
HSPSIPIVSKAPTLILGMDVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVE
Sbjct: 183 HSPSIPIVSKAPTLILGMDVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVE 362
Query: 711 MIDNLFKPVSDTEDEGIIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQI 770
MIDNLFKPVSDTEDEGII RDGVSESQFNQVLNIELSQI
Sbjct: 363 MIDNLFKPVSDTEDEGII----------------------RDGVSESQFNQVLNIELSQI 476
Query: 771 IEACKFL 777
IEACKFL
Sbjct: 477 IEACKFL 497
>BF641514 weakly similar to GP|20197419|gb Argonaute (AGO1)-like protein
{Arabidopsis thaliana}, partial (17%)
Length = 593
Score = 276 bits (706), Expect(2) = 4e-79
Identities = 131/175 (74%), Positives = 153/175 (86%)
Frame = +2
Query: 112 PVEGKGAGRKILDRVQETYGSELNGKDLAYDGEKTLFTIGSLAQNKLEFTVVLEDVTSNR 171
PVEGKG GRKI+DRVQETY S+LNGK+ AYDGEK+LFTIGSL QNKLEF +VLEDV S+R
Sbjct: 2 PVEGKGVGRKIMDRVQETYASDLNGKEFAYDGEKSLFTIGSLPQNKLEFEIVLEDVVSSR 181
Query: 172 NNGNASPDGHGSPNDTDRKRLKKSHRSKTYKVEISFASKIPLQAIANALKGHETENYQEA 231
NNGN SPD +G N+ D+KR+++ + +KT+KVEISFA+K+P+ AIANAL+G ETEN+QEA
Sbjct: 182 NNGNRSPDANGD-NEADKKRVRRPYNAKTFKVEISFATKVPMYAIANALRGQETENFQEA 358
Query: 232 IRVLDIILRQHAAKQGCLLVRQNFFHNDPKNFTDVGGGVLGCRGLHSSFRTTQSG 286
+RVLDIILRQHAAKQGCLLVRQ+FFHNDPKNF DVGGGVLGC G H F TQSG
Sbjct: 359 VRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCXGFHFKFXATQSG 523
Score = 38.1 bits (87), Expect(2) = 4e-79
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +3
Query: 278 SSFRTTQSGLSLNIDVSTTMIVHPGPVVDFL 308
SS ++GLSLNI V TTMI+H GPV FL
Sbjct: 498 SSLXLHRAGLSLNIXVXTTMIIHLGPVGGFL 590
>TC90260 homologue to SP|Q9XGW1|PINH_ARATH PINHEAD protein (ZWILLE protein).
[Mouse-ear cress] {Arabidopsis thaliana}, partial (51%)
Length = 2013
Score = 183 bits (465), Expect(2) = 2e-72
Identities = 102/218 (46%), Positives = 131/218 (59%), Gaps = 17/218 (7%)
Frame = +1
Query: 667 GMDVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVEMIDNLFK----PVSDT 722
G DV+H G+ PSIAAVV+S+ WP ++KY V Q + E+I +L+K PV
Sbjct: 748 GADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPQRQELIQDLYKTWHDPVRGV 927
Query: 723 EDEGIIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDEKWN 782
G+IR+LL+ F ++G +KP II +RDGVSE QF QVL EL I +AC L+ +
Sbjct: 928 VSGGMIRDLLVSFRRATG-QKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQ 1104
Query: 783 PKFLVIVAQKNHHTKFFQPGSPD--------NVPPGTVVDNKICHPRNYDFYMCAHAGMI 834
P IV QK HHT+ F D N+ PGTVVD KICHP +DFY+C+HAG+
Sbjct: 1105PPVTFIVVQKRHHTRLFANNHKDRNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQ 1284
Query: 835 GTSRPTHYHVLLDEIGF-----SPDDLQELVHSLSYVY 867
GTSRP HYHVL DE F S D Q L+H + +VY
Sbjct: 1285GTSRPAHYHVLWDENNFTAGWNSVFDKQSLLH-ICHVY 1395
Score = 108 bits (271), Expect(2) = 2e-72
Identities = 74/247 (29%), Positives = 123/247 (48%), Gaps = 13/247 (5%)
Frame = +3
Query: 432 SSLVEKSRQKPQERMRVLTDALKTSDYGSEPMLRNCGISITSGFTQVDGRVLQAPRLKF- 490
+SL++ + Q+P++R + ++ + Y +P + GI ++ V+ R+L AP LK+
Sbjct: 21 TSLLKVTCQRPRDRENDILRTVQHNAYDQDPYAKEFGIKVSEKLASVEARILPAPWLKYH 200
Query: 491 --GNGEDFNPRNGRWNFNNKKIVQPVKIEKWAVVNFSARCD---VRGLVRDLIKCGGMKG 545
G ++ P+ G+WN NKK++ + + +WA +NFS R +L + + G
Sbjct: 201 ESGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRGVQDSVARTFCNELAQMCQVSG 380
Query: 546 IHVEQPFDCFEENGQFRRAPPLVRVEKMFEHV----QSKLPGAPKFLLCLLSERKNSDLY 601
+ E A P +VEK +HV +K G LL ++ N LY
Sbjct: 381 MEFN-----LEPVIPIYNAKP-EQVEKALKHVYHVSSNKTKGKELELLLVILPDNNGSLY 542
Query: 602 GPWKKKNLAEFGIVTQCIAPT---RVNDQYLTNVLLKINAKLGGMNSLLGVEHSPSIPIV 658
G K+ + G+++QC ++ QYL NV LKIN K+GG N++L S IP+V
Sbjct: 543 GDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLVDAVSCRIPLV 722
Query: 659 SKAPTLI 665
S PT+I
Sbjct: 723 SDIPTII 743
Score = 48.5 bits (114), Expect = 1e-05
Identities = 30/84 (35%), Positives = 44/84 (51%), Gaps = 3/84 (3%)
Frame = +2
Query: 854 DDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSHGGSGRDI 913
D +Q L ++L Y Y T ++SVV P YAHLAA + +F D ET S+ G +
Sbjct: 1343 DGIQSLTNNLCYTYATCTRSVSVVPPAYYAHLAAFR-ARFYTEPDLQETGSTGGRGSKTT 1519
Query: 914 NAS---PIPQLPKLMDSVCNSMFF 934
A+ + LP L ++V MF+
Sbjct: 1520 RAAGDCGVKPLPALKENVKRVMFY 1591
>BI311950 similar to GP|20197419|gb| Argonaute (AGO1)-like protein
{Arabidopsis thaliana}, partial (10%)
Length = 592
Score = 226 bits (577), Expect = 2e-59
Identities = 113/124 (91%), Positives = 114/124 (91%)
Frame = +3
Query: 812 VVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRST 871
VVD+KICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRST
Sbjct: 3 VVDSKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRST 182
Query: 872 TAISVVAPICYAHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDSVCNS 931
TAISVVAPICYAHLAASQVGQFMKFEDKSETSSS GG INAS IPQLP L VCNS
Sbjct: 183 TAISVVAPICYAHLAASQVGQFMKFEDKSETSSSQGG----INASLIPQLPNLHKRVCNS 350
Query: 932 MFFV 935
MFFV
Sbjct: 351 MFFV 362
>TC85647 similar to GP|6539559|dbj|BAA88176.1 ESTs AU068544(C30430)
C98487(E0325) D23445(C2825) AU068543(C30430)
C71774(E0325) D22458(C11152), partial (11%)
Length = 1366
Score = 221 bits (563), Expect = 1e-57
Identities = 107/107 (100%), Positives = 107/107 (100%)
Frame = +3
Query: 705 QGAKVEMIDNLFKPVSDTEDEGIIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLN 764
QGAKVEMIDNLFKPVSDTEDEGIIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLN
Sbjct: 3 QGAKVEMIDNLFKPVSDTEDEGIIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLN 182
Query: 765 IELSQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGT 811
IELSQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGT
Sbjct: 183 IELSQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGT 323
>TC90557 similar to SP|O04379|AGO1_ARATH Argonaute protein. [Mouse-ear
cress] {Arabidopsis thaliana}, partial (8%)
Length = 597
Score = 107 bits (268), Expect = 2e-23
Identities = 56/120 (46%), Positives = 78/120 (64%)
Frame = +1
Query: 806 NVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSY 865
N PGTVV++ I HP +DFY+ +H G+ GTSRPTHYHVLLDE GF+ D LQ L ++L Y
Sbjct: 13 NCQPGTVVESVITHPCEFDFYLQSHPGLQGTSRPTHYHVLLDENGFNSDSLQTLSYNLCY 192
Query: 866 VYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLM 925
V+ R T A+S+V P+ YAHL ++ E+ S+ +S G+G A+ +L K+M
Sbjct: 193 VFARCTRAVSLVPPVYYAHLVCARARFHSSGENWSDPDTSE-GAGSASYAAVKTELLKVM 369
>BI309506 similar to GP|12597784|gb pinhead-like protein {Arabidopsis
thaliana}, partial (20%)
Length = 737
Score = 105 bits (263), Expect = 6e-23
Identities = 71/209 (33%), Positives = 110/209 (51%), Gaps = 5/209 (2%)
Frame = +1
Query: 570 VEKMFEHVQSKLPGAPKFLLCLLSERKNSDLYGPWKKKNLAEFGIVTQC-IAPT--RVND 626
+E + +QS + L+C++ ++ Y K+ G+V+QC + P +++
Sbjct: 145 LESKLKRIQSIASNNLQLLICIMEKKHKG--YADLKRIAETSVGVVSQCCLYPNLIKLSS 318
Query: 627 QYLTNVLLKINAKLGGMNSLLGVEHSPSIPIVSKA--PTLILGMDVSHGSPGQTEIPSIA 684
Q+L N+ LKINAK+GG L +P + P + +G DV+H P PS+A
Sbjct: 319 QFLANLALKINAKVGGCTVALYNSLPSQLPRLFNIDEPVMFMGADVTHPHPLDDSSPSVA 498
Query: 685 AVVSSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSDTEDEGIIRELLIDFYNSSGNRKP 744
AVV S WP +KY + +R+Q + E+I +L ++ ELL DFY + P
Sbjct: 499 AVVGSMNWPTANKYISRIRSQTHRQEIIADL---------GAMVGELLEDFYQEV-EKLP 648
Query: 745 DNIIIFRDGVSESQFNQVLNIELSQIIEA 773
+ II FRDGVSE+QF +VL EL I +A
Sbjct: 649 NRIIFFRDGVSETQFYKVLQEELQSIKQA 735
>BQ149740 similar to GP|21280323|db AGO1 homologous protein {Oryza sativa
(japonica cultivar-group)}, partial (14%)
Length = 412
Score = 104 bits (260), Expect = 1e-22
Identities = 55/115 (47%), Positives = 73/115 (62%), Gaps = 4/115 (3%)
Frame = +3
Query: 669 DVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVEMIDNLFK----PVSDTED 724
DV+H PG+ PSIAAVV+S WP ++KYR V +Q + E+I +L+ P T
Sbjct: 66 DVTHPHPGEDSSPSIAAVVASMDWPCVTKYRGMVSSQIHREEIIQDLYTETKHPQKGTVP 245
Query: 725 EGIIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDE 779
G+IRELL+ FY S+ RKP+ II +RDGVSE QF QVL E+ I +AC +E
Sbjct: 246 GGMIRELLLAFYRSNNKRKPERIIFYRDGVSEGQFXQVLLYEMDAIWKACASFEE 410
>BI271909 similar to SP|Q9XGW1|PINH PINHEAD protein (ZWILLE protein).
[Mouse-ear cress] {Arabidopsis thaliana}, partial (23%)
Length = 694
Score = 86.7 bits (213), Expect(2) = 1e-19
Identities = 60/208 (28%), Positives = 99/208 (46%), Gaps = 10/208 (4%)
Frame = +1
Query: 421 RYTKALSTLQRSSLVEKSRQKPQERMRVLTDALKTSDYGSEPMLRNCGISITSGFTQVDG 480
RYTK L+ Q +SL++ + Q+P++R + ++ + Y +P + GI+I+ V+
Sbjct: 1 RYTKRLNEKQITSLLKVTCQRPRDRENDILQTVQHNAYDQDPYAKEFGINISEKLASVEA 180
Query: 481 RVLQAPRLKF---GNGEDFNPRNGRWNFNNKKIVQPVKIEKWAVVNFSARCD---VRGLV 534
R+L P LK+ G ++ P G+WN NKK++ + + +WA +NFS R
Sbjct: 181 RILPTPWLKYHESGKEKNCLPHVGQWNMMNKKMINGMTVNRWACINFSRSVQDSVARTFC 360
Query: 535 RDLIKCGGMKGIHVEQPFDCFEENGQFRRAPPLVRVEKMFEHV----QSKLPGAPKFLLC 590
DL + + G+ E A P +VEK +HV +K G LL
Sbjct: 361 NDLAQMCQVSGMEFN-----LEPVIPIYNAKP-EQVEKALKHVYHVSTNKTKGKELELLL 522
Query: 591 LLSERKNSDLYGPWKKKNLAEFGIVTQC 618
+ N LYG K+ + GI++QC
Sbjct: 523 AILPDSNGSLYGDLKRICETDLGIISQC 606
Score = 28.9 bits (63), Expect(2) = 1e-19
Identities = 12/22 (54%), Positives = 15/22 (67%)
Frame = +3
Query: 623 RVNDQYLTNVLLKINAKLGGMN 644
++ QYL NV LKIN K+G N
Sbjct: 627 QITKQYLANVSLKINVKMGXRN 692
>TC93345 similar to SP|Q9SJK3|AGOL_ARATH Argonaute-like protein At2g27880.
[Mouse-ear cress] {Arabidopsis thaliana}, partial (12%)
Length = 639
Score = 90.1 bits (222), Expect = 4e-18
Identities = 51/155 (32%), Positives = 83/155 (52%), Gaps = 3/155 (1%)
Frame = +3
Query: 395 LPCINVGKPKRPTFVPVELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLTDALK 454
LP + G RP F+P+ELC + S QRY+K L+ Q ++L+ + Q+PQ+R + +
Sbjct: 21 LPALQAGSDTRPMFIPMELCQIESGQRYSKRLNEEQVTNLLRATCQRPQQRENDIKKIVT 200
Query: 455 TSDYGSEPMLRNCGISITSGFTQVDGRVLQAPRLKF-GNGED--FNPRNGRWNFNNKKIV 511
+ ++ + + GI++ VD RVL P LK+ GNG D PR G+WN K+V
Sbjct: 201 QHRFNADKVAKEFGINVREELALVDARVLPPPMLKYHGNGGDSKIEPRMGQWNMIRHKVV 380
Query: 512 QPVKIEKWAVVNFSARCDVRGLVRDLIKCGGMKGI 546
++ W+ ++FS R + +L+ KGI
Sbjct: 381 NGGTVQFWSCLSFS-RLNPTQFCAELVNMCQAKGI 482
>TC80433 similar to GP|8778710|gb|AAF79718.1| T1N15.2 {Arabidopsis
thaliana}, partial (13%)
Length = 794
Score = 52.8 bits (125), Expect = 6e-07
Identities = 44/145 (30%), Positives = 63/145 (43%), Gaps = 4/145 (2%)
Frame = +3
Query: 26 QEMGS---QENEECLPPPPPIVPADIEPIKIEPQIVKKKLPTKVPMARRGLGSKGAKLPL 82
Q++G Q +E PPPPP + K + P+ R G GS G K +
Sbjct: 423 QDLGQLTIQSDETPAPPPPP----------------QSKSSLRFPL-RPGKGSYGRKTLV 551
Query: 83 LTNHFKVNVTNTDGYFFQYSVALFYEDGRPVEGKGAGRKILDRVQETYGSELNGKDL-AY 141
NHF + D QY V + E V +G R +++++ Y GK L AY
Sbjct: 552 KANHFFAELPKKD--LHQYDVTITPE----VTSRGVNRAVMEQLVRLYRDSHLGKRLPAY 713
Query: 142 DGEKTLFTIGSLAQNKLEFTVVLED 166
DG K+L+T G L +F + L D
Sbjct: 714 DGRKSLYTAGPLPFISKDFRITLVD 788
>AW693202 similar to GP|12597784|gb| pinhead-like protein {Arabidopsis
thaliana}, partial (7%)
Length = 428
Score = 44.7 bits (104), Expect = 2e-04
Identities = 39/147 (26%), Positives = 62/147 (41%)
Frame = +3
Query: 74 GSKGAKLPLLTNHFKVNVTNTDGYFFQYSVALFYEDGRPVEGKGAGRKILDRVQETYGSE 133
G +G + LL NHF V ++ + Y+V + P K R+I ++
Sbjct: 36 GQEGPVISLLANHFLVKFDSSHK-IYHYNVEI-----TPHPSKDVAREIKHKLVNNNAEI 197
Query: 134 LNGKDLAYDGEKTLFTIGSLAQNKLEFTVVLEDVTSNRNNGNASPDGHGSPNDTDRKRLK 193
L+G AYDG K L++ +KLEF + L TS + SP +
Sbjct: 198 LSGALPAYDGRKNLYSPIEFQNDKLEFYIGLPIPTSK----STSP-------------YE 326
Query: 194 KSHRSKTYKVEISFASKIPLQAIANAL 220
K + K +++ I SKI + + N L
Sbjct: 327 KREQHKLFRINIKLVSKIDGKGLTNYL 407
>TC85502 homologue to SP|P27990|PALY_MEDSA Phenylalanine ammonia-lyase (EC
4.3.1.5). [Alfalfa] {Medicago sativa}, complete
Length = 2415
Score = 30.4 bits (67), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (49%), Gaps = 2/48 (4%)
Frame = +3
Query: 804 PDNVPPGTVVDNKI--CHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEI 849
PD+ PP T V NK+ C + DF M + S+ TH+H E+
Sbjct: 465 PDSAPPHTAVPNKVVLCRKNSSDF*MLEYL-ETELSQATHFHTQQQEL 605
>TC93205 similar to PIR|A86309|A86309 hypothetical protein AAD50008.1
[imported] - Arabidopsis thaliana, partial (7%)
Length = 689
Score = 30.0 bits (66), Expect = 4.3
Identities = 30/113 (26%), Positives = 43/113 (37%), Gaps = 3/113 (2%)
Frame = +1
Query: 793 NHHTKFFQPGSPDNVPPGT--VVD-NKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEI 849
+HH QP + PP T V D N N+ F A S P +LL
Sbjct: 235 DHHNLIHQPSTKPRTPPSTFNVEDLNSRFRRVNFTFQKKALHSRHSPSPPPSLPLLLSP- 411
Query: 850 GFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSET 902
SP L L+H ++ RS I + + AA+ +F F + +T
Sbjct: 412 -QSPSLLHHLIH--LRLHHRSNERIRITRHLSLTPTAATSFNRFQLFRSRIKT 561
>TC79555 homologue to GP|10567859|gb|AAG18593.1 L8019.5 {Leishmania major},
partial (1%)
Length = 1410
Score = 30.0 bits (66), Expect = 4.3
Identities = 15/43 (34%), Positives = 20/43 (45%)
Frame = +2
Query: 38 PPPPPIVPADIEPIKIEPQIVKKKLPTKVPMARRGLGSKGAKL 80
PPPPP PA + P+ + P ++P ARR G L
Sbjct: 668 PPPPPFFPARRPGTRSLPKSPPRPRPARLPSARRASPRGGRPL 796
>BE941307 homologue to GP|21280323|dbj AGO1 homologous protein {Oryza sativa
(japonica cultivar-group)}, partial (6%)
Length = 619
Score = 25.8 bits (55), Expect(2) = 5.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 669 DVSHGSPGQTEIPSIAAV 686
DV+H PG+ PSIAAV
Sbjct: 614 DVTHPHPGEDSSPSIAAV 561
Score = 22.3 bits (46), Expect(2) = 5.0
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2
Query: 686 VVSSRQWPLISKY 698
VV+S+ WP I+KY
Sbjct: 459 VVASQDWPEITKY 421
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.137 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,412,187
Number of Sequences: 36976
Number of extensions: 432254
Number of successful extensions: 2369
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 2257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2334
length of query: 935
length of database: 9,014,727
effective HSP length: 105
effective length of query: 830
effective length of database: 5,132,247
effective search space: 4259765010
effective search space used: 4259765010
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Medicago: description of AC124972.13