TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC124967.9 - phase: 0 
         (122 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC91172 similar to GP|21618190|gb|AAM67240.1 unknown {Arabidopsi...   110  1e-25
TC91053 weakly similar to PIR|G84766|G84766 hypothetical protein...    39  5e-04
TC84675 similar to GP|21553798|gb|AAM62891.1 unknown {Arabidopsi...    33  0.021
TC82431 weakly similar to GP|8777399|dbj|BAA96989.1 emb|CAB86483...    30  0.17
TC80527 similar to GP|11994425|dbj|BAB02427. auxin-regulated pro...    30  0.30
BQ138544 similar to GP|8777399|dbj| emb|CAB86483.1~gene_id:MFB16...    29  0.51
TC86259 PIR|A25642|HSZM4 histone H4 - maize, complete                  28  1.1
TC81859 similar to GP|18491135|gb|AAL69536.1 At1g04290/F19P19_27...    26  3.3
TC88051 similar to GP|15982866|gb|AAL09780.1 At1g27210/T7N9_27 {...    26  4.3
TC92637 similar to PIR|T39903|T39903 serine-rich protein - fissi...    25  5.6
TC76630 homologue to GP|18033654|gb|AAL57201.1 putative nodule m...    25  5.6
TC85581 weakly similar to PIR|T14329|T14329 dermal glycoprotein ...    25  9.6
TC81881 similar to GP|20161745|dbj|BAB90661. hypothetical protei...    25  9.6
TC86399 similar to PIR|T00710|T00710 thioredoxin homolog F22O13....    25  9.6
TC85580 similar to GP|13272443|gb|AAK17160.1 unknown protein {Ar...    25  9.6
TC78859 homologue to PIR|T39903|T39903 serine-rich protein - fis...    25  9.6
CA860342 GP|12311751|emb putative vacuolar polyphosphatase {Schi...    25  9.6

>TC91172 similar to GP|21618190|gb|AAM67240.1 unknown {Arabidopsis
           thaliana}, partial (55%)
          Length = 577

 Score =  110 bits (276), Expect = 1e-25
 Identities = 62/120 (51%), Positives = 81/120 (66%), Gaps = 2/120 (1%)
 Frame = +1

Query: 5   GKLMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVTSDVV 64
           GKL KLKSA+K+W S    K SR++ S  +         +LH V+VGKSRR Y V SDV+
Sbjct: 46  GKLTKLKSAIKRWPSLT--KLSRNNSSVSSSTKQHEHEQELHAVYVGKSRRQYLVNSDVI 219

Query: 65  DNPVFRELVERSRETEQQNDTVNVVACEVVLFEHLLWMLENADPQPE--SLDELVDFYAC 122
            +PVF+ELV+RS      +D V VV+CEVVLFEHLLWMLE+ + + +  S+ ELV+FY C
Sbjct: 220 QHPVFQELVDRS----SCDDGVVVVSCEVVLFEHLLWMLESVEGETQLGSMAELVEFYNC 387


>TC91053 weakly similar to PIR|G84766|G84766 hypothetical protein At2g35290
           [imported] - Arabidopsis thaliana, partial (47%)
          Length = 698

 Score = 38.9 bits (89), Expect = 5e-04
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
 Frame = +2

Query: 35  DEDSSSSRSDLHTVFVGKSRRLYRVTSDVVDNPVFRELVERSRE---TEQQND------- 84
           D+  S SR    TV VGK ++++ V   ++    F+ L++ S +   T+++ D       
Sbjct: 233 DQQDSDSRV---TVVVGKEKKVFLVDPIILQENPFKVLMDISMKKDPTKKKKDHFHFSSS 403

Query: 85  --TVNVVACEVVLFEHLLWMLENADPQ--PESLDELVDFY 120
              V  V  + +LFEH+LW++ N        +L ++VDFY
Sbjct: 404 QQRVIFVDVDDILFEHMLWLMNNDTSSLFQLNLKDIVDFY 523


>TC84675 similar to GP|21553798|gb|AAM62891.1 unknown {Arabidopsis
           thaliana}, partial (46%)
          Length = 599

 Score = 33.5 bits (75), Expect = 0.021
 Identities = 23/90 (25%), Positives = 45/90 (49%), Gaps = 8/90 (8%)
 Frame = +1

Query: 24  KQSRHSISAVADEDSSSSRSDLH-------TVFVGKSRRLYRVTSDVVDNPVFRELVERS 76
           K+    +S  +DEDS +S    H        V+VG   R + + +  + + +F+ L+E++
Sbjct: 79  KRLNSLMSFDSDEDSCNSPKAPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKMLLEKA 258

Query: 77  RETEQQNDTVNV-VACEVVLFEHLLWMLEN 105
            +    N    + + CE+  F++LL  +EN
Sbjct: 259 ADEFGFNQCGGLTIPCEIETFKYLLSCMEN 348


>TC82431 weakly similar to GP|8777399|dbj|BAA96989.1
           emb|CAB86483.1~gene_id:MFB16.16~similar to unknown
           protein {Arabidopsis thaliana}, partial (33%)
          Length = 717

 Score = 30.4 bits (67), Expect = 0.17
 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = +1

Query: 48  VFVGKSRRLYRVTSDVVDNPVFRELVER-SRETEQQNDTVNVVACEVVLFEHLLWMLENA 106
           V+VG  R+ + +   + ++P+F+ L+E    E   +ND    + C+V LF   L  +E+A
Sbjct: 283 VYVGPERQRFVIKIKIFNHPLFKTLLEDVENEYGYRNDGPLWLPCDVDLFCEALVEIESA 462

Query: 107 D 107
           +
Sbjct: 463 E 465


>TC80527 similar to GP|11994425|dbj|BAB02427. auxin-regulated protein-like
           {Arabidopsis thaliana}, partial (62%)
          Length = 632

 Score = 29.6 bits (65), Expect = 0.30
 Identities = 16/58 (27%), Positives = 35/58 (59%), Gaps = 1/58 (1%)
 Frame = +1

Query: 48  VFVGKSRRLYRVTSDVVDNPVFRELV-ERSRETEQQNDTVNVVACEVVLFEHLLWMLE 104
           ++VG     + V ++++++PVF +L+ E ++E   +   V  + C V++FE +L  L+
Sbjct: 280 IYVGDEMERFVVCAELLNHPVFIKLLNESAQEYGYEQKGVLRLPCHVLVFERVLEALK 453


>BQ138544 similar to GP|8777399|dbj| emb|CAB86483.1~gene_id:MFB16.16~similar
           to unknown protein {Arabidopsis thaliana}, partial (16%)
          Length = 395

 Score = 28.9 bits (63), Expect = 0.51
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 13/86 (15%)
 Frame = +2

Query: 5   GKLMKLKSALKKWNSFG-NGKQSRHSISAVADEDSSSSRSD------------LHTVFVG 51
           GK  K K  LK W S G  G  S+   S + ++ SS S S+              TV+VG
Sbjct: 83  GKCKKNK-ILKAWRSLGRGGDNSKLLRSLLLNKSSSKSFSENAKGRIVKIPNGCFTVYVG 259

Query: 52  KSRRLYRVTSDVVDNPVFRELVERSR 77
              + + V +  V++P F+ L+  SR
Sbjct: 260 LQSQRFVVKTKFVNHPKFKMLLG*SR 337


>TC86259 PIR|A25642|HSZM4 histone H4 - maize, complete
          Length = 597

 Score = 27.7 bits (60), Expect = 1.1
 Identities = 15/29 (51%), Positives = 18/29 (61%)
 Frame = +1

Query: 71 ELVERSRETEQQNDTVNVVACEVVLFEHL 99
          E VER  E E+QNDTV    C V+ F+ L
Sbjct: 67 EKVERDWEREEQNDTVR---CFVITFKEL 144


>TC81859 similar to GP|18491135|gb|AAL69536.1 At1g04290/F19P19_27
           {Arabidopsis thaliana}, partial (65%)
          Length = 960

 Score = 26.2 bits (56), Expect = 3.3
 Identities = 16/43 (37%), Positives = 22/43 (50%)
 Frame = +1

Query: 72  LVERSRETEQQNDTVNVVACEVVLFEHLLWMLENADPQPESLD 114
           +V  S+ T     ++ V  C VVL   LLW +  A+PQ   LD
Sbjct: 148 VVSSSQ*TYPHVYSIQVSTCTVVL--SLLWWISQAEPQFPQLD 270


>TC88051 similar to GP|15982866|gb|AAL09780.1 At1g27210/T7N9_27 {Arabidopsis
           thaliana}, partial (16%)
          Length = 1597

 Score = 25.8 bits (55), Expect = 4.3
 Identities = 11/24 (45%), Positives = 14/24 (57%)
 Frame = +1

Query: 16  KWNSFGNGKQSRHSISAVADEDSS 39
           KWNSFGN +     IS   +E S+
Sbjct: 382 KWNSFGNKQSG*KQISKARNESST 453


>TC92637 similar to PIR|T39903|T39903 serine-rich protein - fission yeast
           (Schizosaccharomyces pombe), partial (7%)
          Length = 671

 Score = 25.4 bits (54), Expect = 5.6
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -2

Query: 17  WNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYR 58
           W S  +  + RH  S +  + SSSS+S   T F+   RRL+R
Sbjct: 436 WASSASFHRHRHRFSPLPPQLSSSSKSS--TCFLILPRRLHR 317


>TC76630 homologue to GP|18033654|gb|AAL57201.1 putative nodule membrane
            protein {Medicago sativa}, complete
          Length = 2605

 Score = 25.4 bits (54), Expect = 5.6
 Identities = 9/22 (40%), Positives = 13/22 (58%)
 Frame = +2

Query: 77   RETEQQNDTVNVVACEVVLFEH 98
            R  E + D   + ACE++LF H
Sbjct: 1502 RAVESKRDNGQLTACEILLFHH 1567


>TC85581 weakly similar to PIR|T14329|T14329 dermal glycoprotein precursor
            extracellular - carrot (fragment), partial (72%)
          Length = 1570

 Score = 24.6 bits (52), Expect = 9.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 94   VLFEHLLWMLENADPQPESLDE 115
            ++F +L+W+L N D  P SLD+
Sbjct: 1232 IIFCNLIWLLLNWDLAPCSLDD 1297


>TC81881 similar to GP|20161745|dbj|BAB90661. hypothetical protein {Oryza
           sativa (japonica cultivar-group)}, partial (14%)
          Length = 651

 Score = 24.6 bits (52), Expect = 9.6
 Identities = 15/62 (24%), Positives = 30/62 (48%)
 Frame = +3

Query: 15  KKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVTSDVVDNPVFRELVE 74
           K W     G+++R     VA E   S       V+VG   + + + ++  ++P+F+ L+E
Sbjct: 492 KSWPGLPRGEENRRK--KVAPEGCFS-------VYVGPQMQRFVIKTEYANHPLFKMLLE 644

Query: 75  RS 76
            +
Sbjct: 645 EA 650


>TC86399 similar to PIR|T00710|T00710 thioredoxin homolog F22O13.5 -
           Arabidopsis thaliana, partial (61%)
          Length = 1568

 Score = 24.6 bits (52), Expect = 9.6
 Identities = 9/26 (34%), Positives = 17/26 (64%)
 Frame = -2

Query: 4   GGKLMKLKSALKKWNSFGNGKQSRHS 29
           GG+ +KL+  L++W +F  G ++  S
Sbjct: 322 GGRSVKLRFQLQRWKTFHTGVKATSS 245


>TC85580 similar to GP|13272443|gb|AAK17160.1 unknown protein {Arabidopsis
            thaliana}, partial (87%)
          Length = 1548

 Score = 24.6 bits (52), Expect = 9.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 94   VLFEHLLWMLENADPQPESLDE 115
            ++F +L+W+L N D  P SLD+
Sbjct: 1228 IIFCNLIWLLLNWDLAPCSLDD 1293


>TC78859 homologue to PIR|T39903|T39903 serine-rich protein - fission yeast
           (Schizosaccharomyces pombe), partial (3%)
          Length = 1204

 Score = 24.6 bits (52), Expect = 9.6
 Identities = 16/80 (20%), Positives = 32/80 (40%)
 Frame = -2

Query: 6   KLMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVTSDVVD 65
           K   + S   K++S       RHS      E+   +  D +   V  +   +  T + + 
Sbjct: 888 KKFLMSSISDKFHSVWGSHSHRHSKEDGLIEEGGGNCDDHNKALVVYNNNAHHRTYEALQ 709

Query: 66  NPVFRELVERSRETEQQNDT 85
           NP   ++V+  ++ E   D+
Sbjct: 708 NPSETQVVDEQQDQEDGYDS 649


>CA860342 GP|12311751|emb putative vacuolar polyphosphatase
           {Schizosaccharomyces pombe}, partial (1%)
          Length = 245

 Score = 24.6 bits (52), Expect = 9.6
 Identities = 17/61 (27%), Positives = 26/61 (41%)
 Frame = +1

Query: 24  KQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVTSDVVDNPVFRELVERSRETEQQN 83
           K+ +   + V  ED    R+D+   F  +S           D P    LVE + ETE+ N
Sbjct: 67  KKKKKKKNKVVFEDEVEQRADIEFQFEDQS-----------DYPAPVPLVEENNETEENN 213

Query: 84  D 84
           +
Sbjct: 214 E 216


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.315    0.130    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,536,572
Number of Sequences: 36976
Number of extensions: 37950
Number of successful extensions: 206
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of query: 122
length of database: 9,014,727
effective HSP length: 84
effective length of query: 38
effective length of database: 5,908,743
effective search space: 224532234
effective search space used: 224532234
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)