BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124967.12 - phase: 0
(552 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC79642 similar to PIR|T07397|T07397 kinesin heavy chain-like pr... 179 5e-46
TC88934 similar to PIR|T00434|T00434 probable kinesin heavy chai... 171 7e-43
BI265352 similar to PIR|F84599|F84 probable kinesin heavy chain ... 145 5e-35
TC82643 similar to GP|10998143|dbj|BAB03114. kinesin (centromere... 130 1e-30
TC81646 similar to GP|13536981|dbj|BAB40709. BY-2 kinesin-like p... 82 1e-29
BE999515 similar to PIR|T07397|T0 kinesin heavy chain-like prote... 114 1e-25
AW692096 homologue to GP|10140692|gb kinesin-like protein {Oryza... 114 1e-25
TC83691 similar to PIR|T00434|T00434 probable kinesin heavy chai... 102 6e-25
TC80825 similar to PIR|F84614|F84614 probable kinesin heavy chai... 105 5e-23
BG450258 similar to GP|10998143|d kinesin (centromere protein) l... 100 1e-21
TC80383 similar to PIR|C85065|C85065 kinesin-like protein [impor... 97 2e-20
CA917167 similar to GP|7270878|emb kinesin like protein {Arabido... 96 3e-20
TC80343 similar to PIR|C96661|C96661 kinesin-like protein 73641... 92 5e-19
AW689037 similar to GP|10177316|d kinesin-like protein {Arabidop... 86 3e-17
AJ499156 similar to GP|10176794|db kinesin-like protein {Arabido... 79 6e-15
BG583316 homologue to GP|11994617|db contains similarity to kine... 78 1e-14
AW685809 similar to PIR|E84792|E8 probable kinesin heavy chain [... 70 2e-12
TC92104 similar to PIR|D86151|D86151 hypothetical protein AAF764... 67 2e-11
CA989870 similar to GP|18201934|g kinesin-like protein heavy cha... 63 3e-10
AL377028 SP|O23826|K12 125 kDa kinesin-related protein. [Common ... 63 3e-10
>TC79642 similar to PIR|T07397|T07397 kinesin heavy chain-like protein (clone
PKCBP) - potato, partial (42%)
Length = 2321
Score = 179 bits (454), Expect(2) = 5e-46
Identities = 115/307 (37%), Positives = 171/307 (55%), Gaps = 10/307 (3%)
Frame = +3
Query: 66 NPNQERPSTSYTFDRVFPPACSTQKVYDEGAKDVALSALSGINATIFAYGQTSSGKTFTM 125
NP Q Y +DRVF +TQ+ E + + SA+ G N IFAYGQT SGKTFT+
Sbjct: 1077 NPKQ------YIYDRVFG-GDATQETVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTI 1235
Query: 126 RG------ITENAIRDIYECIKNTPDR-DFVLKISALEIYNETVIDLL---NRESGPLRI 175
G +T AI +++ ++ ++ F LK +E+Y +T+IDLL N + L I
Sbjct: 1236 YGSEDNPGLTPRAIAELFRILRRDSNKYSFSLKAYMVELYQDTLIDLLLPKNAKHSRLDI 1415
Query: 176 LDDTEKVTVVENLFEEVARDAQHLRHLIGICEAHRQVGETTLNDKSSRSHQIIRLTVESF 235
D+ + VVEN+ + L ++I R + T +N++SSRSH I+ + VES
Sbjct: 1416 KKDSTGMVVVENVTVMSISTIEELNYIIQKGSERRHISGTQMNEESSRSHLILSIVVEST 1595
Query: 236 HRESPDHVKSYIASLNFVDLAGSERASQTNTCGTRLKEGSHINKSLLQLALVIRQLSSGK 295
+ +S + L+FVDLAGSER ++ + G++LKE INKSL L VI LSSG
Sbjct: 1596 NLQSQSVARG---KLSFVDLAGSERVKKSGSMGSQLKEAQSINKSLSALGDVISALSSGG 1766
Query: 296 SGHISYRTSKLTRILQSSLGGNARTAIICTVSPSLSHVEQTRNTLSFATNAKEVINTARV 355
H YR KLT ++ SLGGNA+T + VSP S +++T N+L +A+ + ++N
Sbjct: 1767 Q-HTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPIESSLDETHNSLMYASRVRSIVNDPSK 1943
Query: 356 NMVEGEL 362
N+ E+
Sbjct: 1944 NVSSKEI 1964
Score = 23.9 bits (50), Expect(2) = 5e-46
Identities = 12/31 (38%), Positives = 19/31 (60%)
Frame = +2
Query: 31 KIRVTVRMRPLNRKEQAMYDLIAWDCLDDKT 61
KIRV R+RP++ KE + + A +D+ T
Sbjct: 959 KIRVYCRLRPISEKEVSEKEREAVTAVDEFT 1051
>TC88934 similar to PIR|T00434|T00434 probable kinesin heavy chain
[imported] - Arabidopsis thaliana, partial (49%)
Length = 2193
Score = 171 bits (433), Expect = 7e-43
Identities = 125/364 (34%), Positives = 191/364 (52%), Gaps = 15/364 (4%)
Frame = +3
Query: 32 IRVTVRMRPLNRKEQAMYDLIAWDCLDDKTIVFKNPNQE-RPSTSYTFDRVFPPACSTQK 90
IRV R+RP + + + ++D I P++ + S+ F++VF P+ + +
Sbjct: 87 IRVYCRVRPFLPGQPNHSSTV--ENIEDGVITINVPSKNGKGRRSFNFNKVFGPSAAQGE 260
Query: 91 VYDEGAKDVALSALSGINATIFAYGQTSSGKTFTMRG---ITEN-------AIRDIYECI 140
V+ + + + S L G N IFAYGQT SGKTFTM G ITE A+ D++
Sbjct: 261 VFAD-MQPLVRSVLDGFNVCIFAYGQTGSGKTFTMTGPKEITEKSQGVNYRALSDLFYTA 437
Query: 141 KNTPDR-DFVLKISALEIYNETVIDLLNRE--SGPLRILDDTEKVTVVENLFEEVARDAQ 197
D + + + +EIYNE V DLL + + L I ++++ V +
Sbjct: 438 NQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGTNKRLEIRSNSQRGLSVPDASLVQVSSTN 617
Query: 198 HLRHLIGICEAHRQVGETTLNDKSSRSHQIIRLTVESFHRESPDHVKSYIASLNFVDLAG 257
+ L+ + +R VG T LND+SSRSH + + V+ S ++ ++ VDLAG
Sbjct: 618 DVIELMNLGHKNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAVLRG---CMHLVDLAG 788
Query: 258 SERASQTNTCGTRLKEGSHINKSLLQLALVIRQLSSGKSGHISYRTSKLTRILQSSLGGN 317
SER ++ G RLKE HINKSL L VI L+ K+ H+ YR SKLT++LQ SLGG
Sbjct: 789 SERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQ-KNQHVPYRNSKLTQLLQDSLGGQ 965
Query: 318 ARTAIICTVSPSLSHVEQTRNTLSFATNAKEV-INTARVNMVEGELRNPEPEHAGLRSLL 376
A+T + +SP + V +T +TL FA V + ARVN +++ + + A L++ L
Sbjct: 966 AKTLMFVHISPEANAVGETISTLKFAERVATVELGAARVNKDGADVKELKEQIASLKAAL 1145
Query: 377 AEKE 380
A KE
Sbjct: 1146ARKE 1157
>BI265352 similar to PIR|F84599|F84 probable kinesin heavy chain [imported] -
Arabidopsis thaliana, partial (22%)
Length = 408
Score = 145 bits (365), Expect = 5e-35
Identities = 71/135 (52%), Positives = 100/135 (73%), Gaps = 2/135 (1%)
Frame = +2
Query: 32 IRVTVRMRPLNRKEQAMYDLIAWDCLDDKTIVFKNPNQERPS--TSYTFDRVFPPACSTQ 89
I V +R+RPLN KE + + W+C++D TI+++N +E + ++YTFDRVF C T+
Sbjct: 2 ILVLLRLRPLNEKEISANESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCETR 181
Query: 90 KVYDEGAKDVALSALSGINATIFAYGQTSSGKTFTMRGITENAIRDIYECIKNTPDRDFV 149
+VY+EGA+++ALS + GIN++IFAYGQTSSGKT+TM GITE A+ DI++ K +R F
Sbjct: 182 QVYEEGAREIALSVVGGINSSIFAYGQTSSGKTYTMVGITEFAVADIFDYAKRHEERAFA 361
Query: 150 LKISALEIYNETVID 164
LK SA+EIYNE V D
Sbjct: 362 LKFSAIEIYNEIVXD 406
>TC82643 similar to GP|10998143|dbj|BAB03114. kinesin (centromere protein)
like heavy chain-like protein {Arabidopsis thaliana},
partial (25%)
Length = 880
Score = 130 bits (328), Expect = 1e-30
Identities = 80/176 (45%), Positives = 110/176 (62%), Gaps = 1/176 (0%)
Frame = +2
Query: 221 SSRSHQIIRLTVESFH-RESPDHVKSYIASLNFVDLAGSERASQTNTCGTRLKEGSHINK 279
SSRSH I LTVES E + ++ LN +DLAGSE +S+ T G R +EGS+INK
Sbjct: 11 SSRSHTIFTLTVESSPCGEYIEGEAVTLSQLNLIDLAGSE-SSKAETIGMRRREGSYINK 187
Query: 280 SLLQLALVIRQLSSGKSGHISYRTSKLTRILQSSLGGNARTAIICTVSPSLSHVEQTRNT 339
SLL L VI +L+ K+ HI YR SKLTR+LQSSL G+ R ++ICTV+PS S E+T NT
Sbjct: 188 SLLTLGTVISKLTEAKASHIPYRDSKLTRVLQSSLSGHGRVSLICTVTPSSSSSEETHNT 367
Query: 340 LSFATNAKEVINTARVNMVEGELRNPEPEHAGLRSLLAEKELKIQQMEKDMEDLRR 395
L FA AK + A N + E +SL+ + + +IQ +++++E L+R
Sbjct: 368 LKFAHRAKHIEIQAAQNKIIDE-----------KSLIKKYQQEIQCLKEELEQLKR 502
>TC81646 similar to GP|13536981|dbj|BAB40709. BY-2 kinesin-like protein 5
{Nicotiana tabacum}, partial (50%)
Length = 1456
Score = 82.0 bits (201), Expect(2) = 1e-29
Identities = 54/166 (32%), Positives = 86/166 (51%)
Frame = +3
Query: 232 VESFHRESPDHVKSYIASLNFVDLAGSERASQTNTCGTRLKEGSHINKSLLQLALVIRQL 291
+ F R K+ + L VDL GSER +T G L EG IN SL LA V+ L
Sbjct: 465 ISIFRRGDTSEAKTETSKLWMVDLGGSERLLKTGARGLTLDEGRAINLSLSALADVLAAL 644
Query: 292 SSGKSGHISYRTSKLTRILQSSLGGNARTAIICTVSPSLSHVEQTRNTLSFATNAKEVIN 351
+S H+ YR SKLT++L+ SLG ++ ++ +SPS V +T +L+FA A+ + +
Sbjct: 645 KRKRS-HVPYRNSKLTQLLRDSLGDGSKVLMLVHISPSEEDVCETICSLNFAKRARAIES 821
Query: 352 TARVNMVEGELRNPEPEHAGLRSLLAEKELKIQQMEKDMEDLRRQR 397
V M + +KE+KI ++E+++++ +QR
Sbjct: 822 IKEVPMESKK----------------QKEMKIMELEENIKEAEKQR 911
Score = 66.6 bits (161), Expect(2) = 1e-29
Identities = 48/154 (31%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Frame = +1
Query: 83 PPACSTQKVYDEGAKDVALSALSGINATIFAYGQTSSGKTFTMRGITE------NAIRDI 136
P S + V+ + + + SA+ G N +FAYGQT +GKTFTM G E A+ ++
Sbjct: 1 PQEASQESVFVD-VEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEQPGIIPRALEEL 177
Query: 137 YECIKNTPDRDFVLKISALEIYNETVIDLLNRESGPLRILDDTEKVTVVENLFEEVARDA 196
+ F +S LE+Y V DLL + L I D + + +E L E D
Sbjct: 178 FRQASMDGSSSFTFSMSMLEVYMGNVRDLLANSN--LNIQTDPKGLVEIEGLSEVQISDC 351
Query: 197 QHLRHLIGICEAHRQVGETTLNDKSSRSHQIIRL 230
+ R T +N+ SSRSH I L
Sbjct: 352 AKAKWWYNKGRRCRSTSWTNVNEASSRSHCFIYL 453
>BE999515 similar to PIR|T07397|T0 kinesin heavy chain-like protein (clone
PKCBP) - potato, partial (13%)
Length = 526
Score = 114 bits (285), Expect = 1e-25
Identities = 63/153 (41%), Positives = 94/153 (61%)
Frame = +2
Query: 210 RQVGETTLNDKSSRSHQIIRLTVESFHRESPDHVKSYIASLNFVDLAGSERASQTNTCGT 269
R T +N++SSRSH+I+ + +ES + +S + L+FVDLAGSER ++ + G+
Sbjct: 20 RHTAGTQMNEESSRSHRILSIVIESVNLQSQSTARG---KLSFVDLAGSERIKKSGSEGS 190
Query: 270 RLKEGSHINKSLLQLALVIRQLSSGKSGHISYRTSKLTRILQSSLGGNARTAIICTVSPS 329
+LKE INKSL L VI LSSG HI YR KLT ++ SLGGNA+T + VSP
Sbjct: 191 QLKEAQSINKSLSALGDVISALSSGGQ-HIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPV 367
Query: 330 LSHVEQTRNTLSFATNAKEVINTARVNMVEGEL 362
S +++T N+L +A+ + ++N N+ E+
Sbjct: 368 ESSLDETHNSLMYASRVRSIVNDPSKNISSKEI 466
>AW692096 homologue to GP|10140692|gb kinesin-like protein {Oryza sativa
(japonica cultivar-group)}, partial (14%)
Length = 387
Score = 114 bits (284), Expect = 1e-25
Identities = 60/109 (55%), Positives = 79/109 (72%)
Frame = +1
Query: 253 VDLAGSERASQTNTCGTRLKEGSHINKSLLQLALVIRQLSSGKSGHISYRTSKLTRILQS 312
+DLAGSE +S+T T G R KEGS+INKSLL L VI +LS GK+ H+ YR SKLTR+LQS
Sbjct: 1 IDLAGSE-SSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKASHVPYRDSKLTRLLQS 177
Query: 313 SLGGNARTAIICTVSPSLSHVEQTRNTLSFATNAKEVINTARVNMVEGE 361
SL G+ ++ICT++P+ S++E+T NTL FA+ AK V A N + E
Sbjct: 178 SLSGHGHVSLICTITPASSNMEETHNTLKFASRAKRVEIYASRNKIIDE 324
>TC83691 similar to PIR|T00434|T00434 probable kinesin heavy chain
[imported] - Arabidopsis thaliana, partial (22%)
Length = 1056
Score = 102 bits (255), Expect(2) = 6e-25
Identities = 59/140 (42%), Positives = 87/140 (62%), Gaps = 1/140 (0%)
Frame = +1
Query: 250 LNFVDLAGSERASQTNTCGTRLKEGSHINKSLLQLALVIRQLSSGKSGHISYRTSKLTRI 309
++ VDLAGSERA +T G RLKE HINKSL L VI L+ K+ H+ YR SKLT++
Sbjct: 187 MHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVIASLAH-KNAHVPYRNSKLTQL 363
Query: 310 LQSSLGGNARTAIICTVSPSLSHVEQTRNTLSFATNAKEV-INTARVNMVEGELRNPEPE 368
LQ +LGG A+T + +SP + +T +TL FA V + TARVN E++ + +
Sbjct: 364 LQDALGGQAKTLMFVHISPEPDALGETLSTLKFAERVSTVELGTARVNKDNTEVKELKEQ 543
Query: 369 HAGLRSLLAEKELKIQQMEK 388
A L++ LA K+ + + +++
Sbjct: 544 IAMLKAALARKDGEAEHIQQ 603
Score = 29.6 bits (65), Expect(2) = 6e-25
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 202 LIGICEAHRQVGETTLNDKSSRSHQ 226
L+ + +R VG T +ND+SSRSH+
Sbjct: 93 LMNLGHKNRAVGSTAMNDRSSRSHR 167
>TC80825 similar to PIR|F84614|F84614 probable kinesin heavy chain
[imported] - Arabidopsis thaliana, partial (16%)
Length = 1771
Score = 105 bits (262), Expect = 5e-23
Identities = 75/204 (36%), Positives = 112/204 (54%), Gaps = 4/204 (1%)
Frame = +3
Query: 148 FVLKISALEIYNETVIDLLNRESGP----LRILDDTEKVTVVENLFEEVARDAQHLRHLI 203
F + YNE + DLL +GP L I + E V + E + + ++
Sbjct: 30 FTYLLVCSRFYNEQIRDLL--ATGPASKRLEIKQNYEGHHHVPGVVEAKVDNISDVWTVL 203
Query: 204 GICEAHRQVGETTLNDKSSRSHQIIRLTVESFHRESPDHVKSYIASLNFVDLAGSERASQ 263
R VG +N+ SSRSH ++ + V++ + + + KS L VDLAGSER ++
Sbjct: 204 QAGSNARAVGSNNVNEHSSRSHCMLCIMVKTKNLMNGECTKS---KLWLVDLAGSERLAK 374
Query: 264 TNTCGTRLKEGSHINKSLLQLALVIRQLSSGKSGHISYRTSKLTRILQSSLGGNARTAII 323
T+ G RLKE +IN+SL L VI L++ KS HI YR SKLT +LQ SLGG+++T +
Sbjct: 375 TDVQGERLKEAQNINRSLSALGDVISALAA-KSSHIPYRNSKLTHLLQDSLGGDSKTLMF 551
Query: 324 CTVSPSLSHVEQTRNTLSFATNAK 347
+SPS V +T ++L+FAT +
Sbjct: 552 VQISPSDQDVGETLSSLNFATRVR 623
>BG450258 similar to GP|10998143|d kinesin (centromere protein) like heavy
chain-like protein {Arabidopsis thaliana}, partial (15%)
Length = 587
Score = 100 bits (249), Expect = 1e-21
Identities = 61/150 (40%), Positives = 88/150 (58%), Gaps = 7/150 (4%)
Frame = +3
Query: 4 TPMAATPSSKIRRKLADT-PGGSKIREEKIRVTVRMRPLNRKEQAMYDLIAWDCLDDKTI 62
+P +++ SK ++ +T P S+ +E + VTVR RPLN +E + IAW D T+
Sbjct: 150 SPASSSVRSKPQQFYPETVPLDSQKTKENVTVTVRFRPLNPREIRHGEEIAWYA-DGDTV 326
Query: 63 VFKNPNQERPSTSYTFDRVFPPACSTQKVYDEGAKDVALSALSGINATIFAYGQTSSGKT 122
V N+ PS +Y +DRVF P +T+ VYD A+ V A+ G+N T+FAYG TSSGKT
Sbjct: 327 V---RNEYNPSIAYAYDRVFGPTTTTRHVYDVAAQHVVSGAMEGVNGTVFAYGVTSSGKT 497
Query: 123 FTMR------GITENAIRDIYECIKNTPDR 146
TM GI A++D + I+ TP+R
Sbjct: 498 HTMHGDQRSPGIIPLAVKDAFSIIQETPNR 587
>TC80383 similar to PIR|C85065|C85065 kinesin-like protein [imported] -
Arabidopsis thaliana, partial (26%)
Length = 897
Score = 96.7 bits (239), Expect = 2e-20
Identities = 63/177 (35%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Frame = +1
Query: 175 ILDDTEKVTVVENLFEEVARDAQHLRHLIGICEAHRQVGETTLNDKSSRSHQIIRLTVES 234
I D T+V +L + + L+ R VG+T +N++SSRSH + L +
Sbjct: 55 IKHDASGNTLVSDLTVVDVESVKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYG 234
Query: 235 FHRESPDHVKSYIASLNFVDLAGSERASQTNTCGTRLKEGSHINKSLLQLALVIRQLSSG 294
+ + V+ LN +DLAGSER S++ + G RLKE INKSL L+ VI L+
Sbjct: 235 VNESTDQQVQGV---LNLIDLAGSERLSRSGSTGDRLKETQAINKSLSSLSDVIFALAK- 402
Query: 295 KSGHISYRTSKLTRILQSSLGGNARTAIICTVSPSLSHVEQTRNTLSFAT--NAKEV 349
K HI +R SKLT +LQ LGG+++T + ++P + ++ +L FA+ NA E+
Sbjct: 403 KEDHIPFRNSKLTYLLQPCLGGDSKTLMFVNIAPDQASSGESLCSLRFASRVNACEI 573
>CA917167 similar to GP|7270878|emb kinesin like protein {Arabidopsis
thaliana}, partial (12%)
Length = 767
Score = 96.3 bits (238), Expect = 3e-20
Identities = 56/119 (47%), Positives = 76/119 (63%), Gaps = 18/119 (15%)
Frame = +1
Query: 314 LGGNARTAIICTVSPSLSHVEQTRNTLSFATNAKEVINTARVNMV--------------- 358
LGGNARTAIICT+SP+ SHVEQTRNTL FA AKEV A+VN+V
Sbjct: 4 LGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKQLQKELA 183
Query: 359 --EGELRNPEPEHAGLRSLLAEKELKIQQMEKDMEDLRRQRDLAQCQL-DLERRANKVQ 414
EGEL+ P + +LL +K+ +I++M+K++ +L +QRDLA+ ++ DL R K Q
Sbjct: 184 RLEGELKTPATSNTDYVALLRKKDQQIEKMDKEIRELTKQRDLAESRIEDLLRMVGKEQ 360
>TC80343 similar to PIR|C96661|C96661 kinesin-like protein 73641-79546
[imported] - Arabidopsis thaliana, partial (17%)
Length = 1406
Score = 92.0 bits (227), Expect = 5e-19
Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Frame = +3
Query: 250 LNFVDLAGSERASQTNTCGTRLKEGSHINKSLLQLALVIRQLSSGKSGHISYRTSKLTRI 309
L+ VDLAGSER ++ G RLKE NKSL L VI L+ KS H+ YR SKLT++
Sbjct: 30 LHLVDLAGSERVDRSEATGDRLKEAHXXNKSLSALGDVIFALAQ-KSPHVPYRNSKLTQL 206
Query: 310 LQSSLGGNARTAIICTVSPSLSHVEQTRNTLSFATNAKEV-INTARVNMVEGELRNPEPE 368
LQSSLGG A+T + ++P ++ +T +TL FA V + AR N ++R +
Sbjct: 207 LQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARSNKEGRDVRELMEQ 386
Query: 369 HAGLRSLLAEKELKIQQME 387
+ L+ +A K+ +I++++
Sbjct: 387 MSFLKDAMARKDEEIERLQ 443
>AW689037 similar to GP|10177316|d kinesin-like protein {Arabidopsis
thaliana}, partial (13%)
Length = 662
Score = 86.3 bits (212), Expect = 3e-17
Identities = 65/205 (31%), Positives = 99/205 (47%), Gaps = 22/205 (10%)
Frame = +3
Query: 147 DFVLKISALEIYNETVIDLLNRESG----------------PLRILDDTEKVTVVENLFE 190
+F++++S +EI+ E V DLL+ + P++I + + + E
Sbjct: 42 EFLIRVSFIEIFKEEVFDLLDPNASKGESVCNAKFAAPARVPIQIRETLSGGITLAGVTE 221
Query: 191 EVARDAQHLRHLIGICEAHRQVGETTLNDKSSRSHQIIRLTVESFHRESPDHVKSYIASL 250
+ + + + R G T +N +SSRSH I +T+E +++ D V A L
Sbjct: 222 PEVKTKEEMSSYLSRGSMSRATGSTNMNSQSSRSHAIFTITME---QKNGDDV--LCAKL 386
Query: 251 NFVDLAGSERASQTNTCGTRLKEGSHINKSLLQLALVIRQLSSGKSGHISYRTSKLTRI- 309
+ VDLAGSERA +T G RLKEG HINK LL L VI L + R ++RI
Sbjct: 387 HLVDLAGSERAKRTGADGMRLKEGIHINKGLLTLGNVISALGDERR-RKRRRPCTVSRIA 563
Query: 310 -----LQSSLGGNARTAIICTVSPS 329
+ SLG N+ T +I V P+
Sbjct: 564 S*HAFCRISLGXNSXTVMIACVXPA 638
>AJ499156 similar to GP|10176794|db kinesin-like protein {Arabidopsis
thaliana}, partial (22%)
Length = 678
Score = 78.6 bits (192), Expect = 6e-15
Identities = 57/171 (33%), Positives = 86/171 (49%), Gaps = 31/171 (18%)
Frame = +1
Query: 210 RQVGETTLNDKSSRSHQIIRLTVESFHRESPDHVKSYIASLNFVDLAGSERASQTNTCGT 269
R VG+T +N++SSRSH + L + + + V+ LN +DLAGSER S++ + G
Sbjct: 37 RSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGV---LNLIDLAGSERLSRSGSTGD 207
Query: 270 RLKEGS-----------------------------HINKSLLQLALVIRQLSSGKSGHIS 300
RLKE INKSL L+ VI L+ K HI
Sbjct: 208 RLKETQVCKTIRCFLFYTVLLL*FIIIQTSFTCN*AINKSLSSLSDVIFALAK-KEDHIP 384
Query: 301 YRTSKLTRILQSSLGGNARTAIICTVSPSLSHVEQTRNTLSFAT--NAKEV 349
+R SKLT +LQ LGG+++T + ++P + ++ +L FA+ NA E+
Sbjct: 385 FRNSKLTYLLQPCLGGDSKTLMFVNIAPDQASSGESLCSLRFASRVNACEI 537
>BG583316 homologue to GP|11994617|db contains similarity to kinesin
protein~gene_id:MGL6.9 {Arabidopsis thaliana}, partial
(15%)
Length = 725
Score = 77.8 bits (190), Expect = 1e-14
Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Frame = +1
Query: 247 IASLNFVDLAGSERASQT--NTCGTRLKEGSHINKSLLQLALVIRQLSSGKSGHISYRTS 304
+ ++F+DLAGSER + T N TR+ EG+ INKSLL L IR L + + HI +R S
Sbjct: 31 VGKISFIDLAGSERGADTTDNDRQTRI-EGAEINKSLLALKECIRALDNDQI-HIPFRGS 204
Query: 305 KLTRILQSSLGGNARTAIICTVSPSLSHVEQTRNTLSFATNAKEV 349
KLT +L+ S GN++T +I +SP E T NTL +A K +
Sbjct: 205 KLTEVLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRVKSL 339
>AW685809 similar to PIR|E84792|E8 probable kinesin heavy chain [imported] -
Arabidopsis thaliana, partial (14%)
Length = 651
Score = 70.5 bits (171), Expect = 2e-12
Identities = 42/136 (30%), Positives = 68/136 (49%), Gaps = 17/136 (12%)
Frame = +2
Query: 25 SKIREEKIRVTVRMRPLNRKEQAMYDLIAWDCLDDK---TIVFKNPNQERPSTSYTFDRV 81
+K +E ++V +R RPL+ +EQ C ++K T++ N++ + FD+V
Sbjct: 233 NKDKETNVQVLLRCRPLSDEEQRSNVPKVVSCNENKREVTVMHTIANKQVEKV-FNFDKV 409
Query: 82 FPPACSTQKVYDEGAKDVALSALSGINATIFAYGQTSSGKTFTMRGITEN---------- 131
F P + +YD+ + L G N T+FAYGQT +GKT+TM G +N
Sbjct: 410 FGPKSQQRSIYDQAIAPIVNEVLDGFNCTVFAYGQTGTGKTYTMEGGMKNKGGDLTAEAG 589
Query: 132 ----AIRDIYECIKNT 143
A+R I++ NT
Sbjct: 590 VIPRAVRQIFDIFGNT 637
>TC92104 similar to PIR|D86151|D86151 hypothetical protein AAF76473.1
[imported] - Arabidopsis thaliana, partial (10%)
Length = 462
Score = 66.6 bits (161), Expect = 2e-11
Identities = 45/123 (36%), Positives = 63/123 (50%), Gaps = 15/123 (12%)
Frame = +2
Query: 16 RKLADTPGGSKIREE-----------KIRVTVRMRPLNRKEQAMYDLIAWDCLDD----K 60
R + PGGS R ++RV VR+RP N +E+ M D DC++ K
Sbjct: 83 RASSPLPGGSAPRRSNSAAKNDAVPGRVRVAVRLRPRNAEEE-MADADFGDCVELQPELK 259
Query: 61 TIVFKNPNQERPSTSYTFDRVFPPACSTQKVYDEGAKDVALSALSGINATIFAYGQTSSG 120
+ + N + S +Y FD V + S ++VY+ AK V S L G N T+ AYGQT +G
Sbjct: 260 RLKLRRNNWD--SDTYEFDEVLTQSASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTG 433
Query: 121 KTF 123
KTF
Sbjct: 434 KTF 442
>CA989870 similar to GP|18201934|g kinesin-like protein heavy chain
{Arabidopsis thaliana}, partial (9%)
Length = 806
Score = 63.2 bits (152), Expect = 3e-10
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 299 ISYRTSKLTRILQSSLGGNARTAIICTVSPSLSHVEQTRNTLSFATNAKEV-INTARVNM 357
I YR SKLT++LQ SLGG+A+T + ++P ++ + +T +TL FA + + A+ N
Sbjct: 2 IPYRNSKLTQVLQDSLGGHAKTLMFVHINPEINALGETISTLKFAERVASIELGAAKSNK 181
Query: 358 VEGELRNPEPEHAGLRSLLAEKELKIQQ 385
GE+R + E + ++S L KE +++Q
Sbjct: 182 ETGEIRELKEEISNIKSALERKENELEQ 265
>AL377028 SP|O23826|K12 125 kDa kinesin-related protein. [Common tobacco]
{Nicotiana tabacum}, partial (7%)
Length = 223
Score = 63.2 bits (152), Expect = 3e-10
Identities = 37/67 (55%), Positives = 42/67 (62%)
Frame = +2
Query: 250 LNFVDLAGSERASQTNTCGTRLKEGSHINKSLLQLALVIRQLSSGKSGHISYRTSKLTRI 309
LN VDLAGSE S++ R +E INKSLL L VI L GHI YR SKLTR+
Sbjct: 26 LNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVE-HLGHIPYRDSKLTRL 202
Query: 310 LQSSLGG 316
L+ SLGG
Sbjct: 203 LRDSLGG 223
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.315 0.130 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,606,490
Number of Sequences: 36976
Number of extensions: 163356
Number of successful extensions: 839
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of query: 552
length of database: 9,014,727
effective HSP length: 101
effective length of query: 451
effective length of database: 5,280,151
effective search space: 2381348101
effective search space used: 2381348101
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Medicago: description of AC124967.12