BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124953.18 + phase: 0
(391 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC86098 similar to GP|14719329|gb|AAK73147.1 putative RING-H2 fi... 293 6e-80
TC77563 similar to GP|15450687|gb|AAK96615.1 AT5g59550/f2o15_210... 289 1e-78
TC78535 similar to GP|15028361|gb|AAK76657.1 unknown protein {Ar... 144 4e-35
TC77868 similar to GP|11994207|dbj|BAB01310. gene_id:MPN9.20~unk... 135 3e-32
TC89778 similar to PIR|T00747|T00747 RING-H2 finger protein RHC1... 127 7e-30
TC85071 similar to GP|11994207|dbj|BAB01310. gene_id:MPN9.20~unk... 118 3e-27
TC81723 weakly similar to GP|22655083|gb|AAM98132.1 putative RIN... 110 1e-24
BF648985 similar to PIR|T51245|T512 COP1-interacting protein CIP... 84 7e-17
TC93425 similar to GP|15450675|gb|AAK96609.1 At1g26800/T24P13_21... 80 1e-15
TC78471 similar to GP|19698965|gb|AAL91218.1 ABI3-interacting pr... 77 1e-14
TC89559 similar to GP|20259581|gb|AAM14133.1 unknown protein {Ar... 68 5e-12
BE202606 similar to GP|4651204|dbj ring finger protein {Cicer ar... 68 5e-12
TC90096 similar to PIR|T47832|T47832 hypothetical protein T2O9.6... 66 2e-11
TC91547 weakly similar to GP|6815070|dbj|BAA90357.1 EST AU070319... 59 4e-09
TC79126 similar to PIR|H96703|H96703 probable RING zinc finger p... 55 6e-08
TC79350 similar to PIR|T08944|T08944 hypothetical protein F25O24... 54 8e-08
TC84456 similar to GP|15450836|gb|AAK96689.1 Unknown protein {Ar... 54 1e-07
TC80205 similar to PIR|H96764|H96764 protein RING zinc finger pr... 54 1e-07
TC78411 similar to PIR|T47692|T47692 hypothetical protein T22E16... 53 2e-07
AJ498940 similar to PIR|G96742|G967 unknown protein F17M19.13 [i... 53 2e-07
>TC86098 similar to GP|14719329|gb|AAK73147.1 putative RING-H2 finger
protein {Oryza sativa}, partial (42%)
Length = 1610
Score = 293 bits (751), Expect = 6e-80
Identities = 163/379 (43%), Positives = 217/379 (57%), Gaps = 18/379 (4%)
Frame = +2
Query: 3 SHWCYRCNKFVRVWRLGMPICPDCDSGFLEDVE--QSTHS------ANTVGGRRMRFPMA 54
S+WCY C +F+ + + +CP CD+GF+E++ +S H A+TV RR F
Sbjct: 89 SYWCYSCTRFINLSDHTLIVCPHCDNGFVEEIAAGESPHHRLSPFPADTVSSRRQGF--- 259
Query: 55 AAMYMIGHRNNNYNQNTFRRHRRNNVNGGDISPFNPIIMIRGGGGSSEGTSREREENNEF 114
RR RR+ G SPFNP+I++RG G G + F
Sbjct: 260 ------------------RRRRRD---AGSRSPFNPVIVLRGAGDDGVGEDGAGAGGSAF 376
Query: 115 ELFYEDGAGSGLRALPPRMSELILGSGFERVMEQLSHVEANRSGNEGHNQQHLPALKSAV 174
ELFY+DG GSGLR LPP +SE +LGSGF+R++EQ S +E N G ++ PA K+A+
Sbjct: 377 ELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRP----ENPPASKAAI 544
Query: 175 ELLPTIEINESHMNVESHCAVCKEPFELGISAREMPCKHIYHNECILPWLAIQNSCPVCR 234
E +PT+EI E H++ E HCAVCKE FEL ARE+PCKH+YH++CILPWL ++NSCPVCR
Sbjct: 545 ESMPTVEICEEHVSCELHCAVCKEEFELHAEARELPCKHLYHSDCILPWLTVRNSCPVCR 724
Query: 235 HELPCE-SPQINNEISNSNEDENVGLTIWRLPGGGFAVGRFSGDGGGGENRMEHPIVYTE 293
HELP + + + +S ++E +GLTIWRLPGGGFAVGRFSG GE+ P+VYTE
Sbjct: 725 HELPSDLNNPLETRVSGQIDEEAIGLTIWRLPGGGFAVGRFSGGRSAGESHF--PVVYTE 898
Query: 294 VDGAFNNV--GEPRRISWSLTSSRGGIGRSRGGAFRRMLSNLFGCL-------RGGGVRN 344
+DG N PRRIS ++ + R G FR S FG + G N
Sbjct: 899 MDGGLNAAQGSAPRRISRTVRAHRVRESHGIGRVFRNFFS-FFGRIGSRSNLNSNSGTGN 1075
Query: 345 QHSPFTTREFPQPMTMRNN 363
S +R M RN+
Sbjct: 1076VASVSRSRSLVNSMFSRNS 1132
>TC77563 similar to GP|15450687|gb|AAK96615.1 AT5g59550/f2o15_210
{Arabidopsis thaliana}, partial (39%)
Length = 1468
Score = 289 bits (740), Expect = 1e-78
Identities = 157/343 (45%), Positives = 214/343 (61%), Gaps = 13/343 (3%)
Frame = +2
Query: 2 SSHWCYRCNKFVRVWRLGMPICPDCDSGFLEDVEQSTHSANTVGGRRMRFPMAAAMYMIG 61
+S WCY C +F+ + +CP C +GF+E++ H+ + A +++ G
Sbjct: 86 TSFWCYSCTRFIHILNQNNVVCPHCQNGFVEEI----HAGQSP---------AVSLFADG 226
Query: 62 HRNNNYNQNTFRRHRRNNVNGGDISPFNPIIMIRG-------------GGGSSEGTSRER 108
+++ + T RR RRN GG SPFNP+I++RG GGG SEG +
Sbjct: 227 IQSSR--RQTSRRRRRNA--GGSRSPFNPVIVLRGPREDTTAGVGADAGGGDSEGNT--- 385
Query: 109 EENNEFELFYEDGAGSGLRALPPRMSELILGSGFERVMEQLSHVEANRSGNEGHNQQHLP 168
+ FEL+YED G+ LR LPP MSEL+LGSGF+R++EQ S +E N G ++ P
Sbjct: 386 ---SSFELYYEDSNGTDLRPLPPSMSELLLGSGFDRLLEQFSQIEINGFGRS----ENPP 544
Query: 169 ALKSAVELLPTIEINESHMNVESHCAVCKEPFELGISAREMPCKHIYHNECILPWLAIQN 228
A K+A+E +PT+EI +S M E HCAVCKE FELG AR+MPC H+YH++CILPWL+++N
Sbjct: 545 ASKAAIESIPTVEITDSEMESEIHCAVCKEQFELGSEARKMPCNHLYHSDCILPWLSMRN 724
Query: 229 SCPVCRHELPCESPQINNEISNSNEDENVGLTIWRLPGGGFAVGRFSGDGGGGENRMEHP 288
SCPVCRHELP + + IS ++E VGLTIWRLPGGGFAVGRF+G GE ++ P
Sbjct: 725 SCPVCRHELPSDQNASESRISGQIDEEAVGLTIWRLPGGGFAVGRFAGGRRAGE--IQLP 898
Query: 289 IVYTEVDGAFNNVGEPRRISWSLTSSRGGIGRSRGGAFRRMLS 331
IVYTE+DG N+ + RRIS ++ S+R R FR LS
Sbjct: 899 IVYTEMDGN-NSNEDSRRISLTVGSNRVRERRGIRRIFRNFLS 1024
>TC78535 similar to GP|15028361|gb|AAK76657.1 unknown protein {Arabidopsis
thaliana}, partial (39%)
Length = 1295
Score = 144 bits (364), Expect = 4e-35
Identities = 92/277 (33%), Positives = 138/277 (49%), Gaps = 22/277 (7%)
Frame = +3
Query: 2 SSHWCYRCNKFVRVWRLGMPICPDCDSGFLEDVEQSTHSA--NTVGGRRMRFPMAAAMY- 58
++HWCY CN+ + + + +CP CD GF++++ + +A NT R F ++
Sbjct: 141 ATHWCYECNRPIVLEGRDV-VCPYCDEGFVQELNEMRGTAPQNTFPSRSGEFNQMPDLFD 317
Query: 59 ----MIGHRNNNYN------QNTFRRHRRNNVNGGDISPFNPIIMIRGGGGSSEGTSRER 108
+GHR ++ + F RHR ++ +P +RG S +
Sbjct: 318 AIHAFVGHRGSDNRFGLMDAVDNFMRHR--------MAGMHPNFDVRGRSSSVPVPEQGW 473
Query: 109 E--ENNEFELFYEDGAGSGLRALPPR-------MSELILGSGFERVMEQLSHVEANRSGN 159
+ F +F+ G L PR + +GSG E ++EQL+ + R G
Sbjct: 474 GVYSSGPFLVFHGQVPGLTLPNGSPRGGPRRGDFGDYFMGSGLEELIEQLTMND--RRGP 647
Query: 160 EGHNQQHLPALKSAVELLPTIEINESHMNVESHCAVCKEPFELGISAREMPCKHIYHNEC 219
PA +S+++ +PTI I ++H+ +SHC VCKE FELG AREMPC HIYH+EC
Sbjct: 648 P-------PAARSSIDAMPTIRITQAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSEC 806
Query: 220 ILPWLAIQNSCPVCRHELPCESPQINNEISNSNEDEN 256
I+PWL NSCPVCR ELP + + S SN N
Sbjct: 807 IVPWLVQHNSCPVCRVELPPQGQMSSRGSSRSNSGGN 917
>TC77868 similar to GP|11994207|dbj|BAB01310. gene_id:MPN9.20~unknown
protein {Arabidopsis thaliana}, partial (36%)
Length = 1019
Score = 135 bits (340), Expect = 3e-32
Identities = 83/268 (30%), Positives = 130/268 (47%), Gaps = 26/268 (9%)
Frame = +1
Query: 21 PICPDCDSGFLEDVEQSTHSANTVGGRRMRFPMAAAMYMIGHRNNNYNQNT---FRRHRR 77
P CP C GFLE+ EQ N N N F H+
Sbjct: 172 PFCPICFQGFLEECEQP--------------------------EPNPNPNVIFRFNHHQD 273
Query: 78 NNVNGGDISPFNPIIMIRGGGGSSEGTSREREENNEFELF----------YEDGAG---- 123
++ + PF+P ++ S+ SR R +++ F+ F + DGA
Sbjct: 274 HSSDSDSEFPFHPFALLPLLLNSA-SVSRTRPDSDSFDPFAFLQNHLNGLHADGANIQFE 450
Query: 124 --------SGLRALPPRMSELILGSGFERVMEQLSHVEANRSGNEGHNQQHLPALKSAVE 175
G R +P + + LG+GFE++++QL+ + NR G PA K AV+
Sbjct: 451 INNPSESEPGFR-VPSNLGDYFLGAGFEQLIQQLAENDPNRYGTP-------PASKEAVK 606
Query: 176 LLPTIEINESHMNVE-SHCAVCKEPFELGISAREMPCKHIYHNECILPWLAIQNSCPVCR 234
LPT+ ++++ ++ E + CAVC++ FE G+ ++MPCKH+YH++C+LPWL + NSCPVCR
Sbjct: 607 NLPTVTVDDALLSSELNQCAVCQDEFEKGMQVKQMPCKHVYHDDCLLPWLELHNSCPVCR 786
Query: 235 HELPCESPQINNEISNSNEDENVGLTIW 262
HELP + N + N + V + W
Sbjct: 787 HELPTDDADYENRGRDDNSGDGVEVCCW 870
>TC89778 similar to PIR|T00747|T00747 RING-H2 finger protein RHC1a
[imported] - Arabidopsis thaliana, partial (29%)
Length = 989
Score = 127 bits (319), Expect = 7e-30
Identities = 83/269 (30%), Positives = 127/269 (46%), Gaps = 11/269 (4%)
Frame = +3
Query: 3 SHWCYRCNKFVRVWRLGMPICPDCDSGFLEDVEQSTHSANTVG-----GRRMRFPMAAAM 57
+HWCY C + VR+ R+ +C CD GF++D+ HS+ V G+R
Sbjct: 72 THWCYNCMRPVRLGRIHT-VCSSCDGGFVQDLNDMVHSSYGVDNVEELGQR--------- 221
Query: 58 YMIGHRNNNYNQNTFRRHRRNNVNGGDISPFNPIIMIRGGGGSSEGTSREREENNEFELF 117
H+ ++ ++ R + GG I P R GG +
Sbjct: 222 ----HQMDSIPEHAPRFTTPLLIYGGQI----PFRFSRQGG---------------IDAL 332
Query: 118 YEDGAGSGLRALPPRMSELILGSGFERVMEQLSHVEANRSGNEGHNQQHLPALKSAVELL 177
+ G+G+ G G E ++EQLS +R G PA +S+++ +
Sbjct: 333 FNGTPGTGVTI--GNSVNYFTGPGVEELLEQLS--ANDRRGPP-------PASRSSIDAI 479
Query: 178 PTIEINESHMNVESHCAVCKEPFELGISAREMPCKHIYHNECILPWLAIQNSCPVCRHEL 237
P ++I+ H+ + HC VC++ FELG AR MPCKH++H++CI+PWL N+CPVCR EL
Sbjct: 480 PIVKISSRHLRSDPHCPVCQDKFELGSDARRMPCKHMFHSDCIVPWLVQHNTCPVCRQEL 659
Query: 238 PCESPQINNEIS------NSNEDENVGLT 260
P +S + N S +SN N G T
Sbjct: 660 PQQSGRRRNPFSFLWPFGSSNSRSNDGAT 746
>TC85071 similar to GP|11994207|dbj|BAB01310. gene_id:MPN9.20~unknown
protein {Arabidopsis thaliana}, partial (28%)
Length = 958
Score = 118 bits (296), Expect = 3e-27
Identities = 82/278 (29%), Positives = 123/278 (43%), Gaps = 39/278 (14%)
Frame = +2
Query: 4 HWCYRCNKFVRVWRLGMP-ICPDCDSGFLEDVEQSTHSANT-----VGGRRMRFPMAAAM 57
++C++C + + ICP+C+S F+E++E + N FP
Sbjct: 95 YFCHQCERTSLISTTSTDLICPNCNSSFIEELESPIPNPNPNPLPPFFSHTTEFPAGGFS 274
Query: 58 YMIGHRNNN------------------YNQNTFRRHRRNNVNGGDISPF----NPIIMIR 95
+ + N +N +++ SPF NP+ I+
Sbjct: 275 FPMLFSGNGAPTATATGAGAGAGSLPPFNDLPAFFQTSPSMSPPSPSPFGEAFNPMAFIQ 454
Query: 96 ----------GGGGSSEGTSREREENNEFELFYEDGAGSGLRALPPRMSELILGSGFERV 145
GGGG + + +E F G + + + G G E +
Sbjct: 455 NYLRNMNAGGGGGGGIQFVINDGDEPGRFRFPGFPGNAN--------LGDYFFGPGLEDL 610
Query: 146 MEQLSHVEANRSGNEGHNQQHLPALKSAVELLPTIEINESHMNVES-HCAVCKEPFELGI 204
++QL+ + NR G PA KSAVE LP IE+ + +S CAVCK+ F LG
Sbjct: 611 IQQLAENDPNRRGTP-------PASKSAVEKLPVIEVTGELLESDSSQCAVCKDTFALGE 769
Query: 205 SAREMPCKHIYHNECILPWLAIQNSCPVCRHELPCESP 242
A++MPCKHIYH++CILPWL + NSCPVCR ELP + P
Sbjct: 770 KAKQMPCKHIYHDDCILPWLELHNSCPVCRFELPTDDP 883
>TC81723 weakly similar to GP|22655083|gb|AAM98132.1 putative RING zinc
finger protein {Arabidopsis thaliana}, partial (44%)
Length = 1007
Score = 110 bits (274), Expect = 1e-24
Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 30/267 (11%)
Frame = +3
Query: 2 SSHWCYRCNKFVRVWRLGMPICPDCDSGFLEDVEQSTHSANT------------------ 43
++ WC+ C + + + +CP CD GF++++ ++ A++
Sbjct: 54 ATFWCHTCREPILLAGRDA-VCPYCDGGFVQEMHENRGLASSSQLEEFQDDPDIFDAIHA 230
Query: 44 -VGGR----RMRFPMAAAMYMIGHRNNNYNQNTFRRHRRNNVNG-------GDISPFNPI 91
V R R+ F A YM R + T RR +V+G G S
Sbjct: 231 VVSQRGSVPRIGFRDAIDSYM---RQRMDGRTTNFDVRRRSVSGSVPEQTWGVFSSSGRY 401
Query: 92 IMIRGGGGSSEGTSREREENNEFELFYEDGAGSGLRALPPRMSELILGSGFERVMEQLSH 151
++ +G +S G R + F + G + ++EQL+
Sbjct: 402 LIFQGQTPTSRGDPRRSDFGGYF-----------------------MDHGLDELIEQLN- 509
Query: 152 VEANRSGNEGHNQQHLPALKSAVELLPTIEINESHMNVESHCAVCKEPFELGISAREMPC 211
N G PA +S++E +PTI+I ++H++ +SHC +C E FELG AREM C
Sbjct: 510 --TNGCGPA-------PASRSSIEAMPTIKITQAHLHSDSHCPICIERFELGSKAREMAC 662
Query: 212 KHIYHNECILPWLAIQNSCPVCRHELP 238
KHIYH++CI+PWL NSCPVCR ELP
Sbjct: 663 KHIYHSDCIVPWLIQHNSCPVCRVELP 743
>BF648985 similar to PIR|T51245|T512 COP1-interacting protein CIP8 [imported]
- Arabidopsis thaliana, partial (15%)
Length = 572
Score = 84.3 bits (207), Expect = 7e-17
Identities = 38/80 (47%), Positives = 51/80 (63%)
Frame = -3
Query: 168 PALKSAVELLPTIEINESHMNVESHCAVCKEPFELGISAREMPCKHIYHNECILPWLAIQ 227
PA KSAVE LP ++I V CAVCKE +G A+ +PC H YH +CI+PWL+ +
Sbjct: 522 PASKSAVEALPPVKIAVGSEVVA--CAVCKEMLGVGXMAKRLPCGHEYHGDCIVPWLSTR 349
Query: 228 NSCPVCRHELPCESPQINNE 247
N CP+CR ELP + + +E
Sbjct: 348 NXCPICRFELPTDDKEYEDE 289
>TC93425 similar to GP|15450675|gb|AAK96609.1 At1g26800/T24P13_21
{Arabidopsis thaliana}, partial (28%)
Length = 596
Score = 80.1 bits (196), Expect = 1e-15
Identities = 54/169 (31%), Positives = 76/169 (44%)
Frame = +2
Query: 72 FRRHRRNNVNGGDISPFNPIIMIRGGGGSSEGTSREREENNEFELFYEDGAGSGLRALPP 131
F R RN D+S F P ++ ++ E E N ED + + P
Sbjct: 83 FERMIRNR----DMSLFLPFMLSLSQTLNNSDPDHESETN-------EDSTPQRIIFVNP 229
Query: 132 RMSELILGSGFERVMEQLSHVEANRSGNEGHNQQHLPALKSAVELLPTIEINESHMNVES 191
+ + G + E N G+ N Q PA K ++E + IEI E
Sbjct: 230 LTQSITVIDGASSIEELF-----NNLGSSTKNGQP-PATKESIEAMDKIEIEEGD---GG 382
Query: 192 HCAVCKEPFELGISAREMPCKHIYHNECILPWLAIQNSCPVCRHELPCE 240
C VC E FE+G +EMPCKH +H +CI WL I SCPVCR+++P +
Sbjct: 383 ECVVCLEEFEVGGVVKEMPCKHRFHGKCIEKWLGIHGSCPVCRYQMPVD 529
>TC78471 similar to GP|19698965|gb|AAL91218.1 ABI3-interacting protein 2
{Arabidopsis thaliana}, partial (66%)
Length = 1125
Score = 76.6 bits (187), Expect = 1e-14
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = +1
Query: 168 PALKSAVELLPTIEINE---SHMNVESHCAVCKEPFELGISAREMPCKHIYHNECILPWL 224
PA K V LP I + E S M ++ CA+C+E L +E+PCKH +H+ C+ PWL
Sbjct: 670 PASKEVVSKLPVITLTEEILSKMGKDAECAICRENLVLNDQMQELPCKHTFHHPCLKPWL 849
Query: 225 AIQNSCPVCRHEL 237
NSCP+CR+EL
Sbjct: 850 DEHNSCPICRYEL 888
>TC89559 similar to GP|20259581|gb|AAM14133.1 unknown protein {Arabidopsis
thaliana}, partial (55%)
Length = 1557
Score = 68.2 bits (165), Expect = 5e-12
Identities = 71/280 (25%), Positives = 117/280 (41%), Gaps = 71/280 (25%)
Frame = +2
Query: 4 HWCYRCNKFVRVWRLGMPI-CPDCDSGFLEDVEQST------HSANTVGG---------- 46
+WC+ C++ V +GM I CP C SGF+E++ +T ++ T G
Sbjct: 233 YWCHACSQIVSPV-MGMEIKCPLCQSGFIEEMSSATGISDLQNTPETDFGVDRSPSLWAP 409
Query: 47 ------------RRMRFPMAAAMYMIGHRNNNYN---------QNTFRRHRRN------- 78
RR+R Y G+R++++ ++ RR RR+
Sbjct: 410 ILLGMMGNPRLRRRLRRIELEDDYESGNRDDDHGGVGHYDRELESILRRRRRSSATIQQL 589
Query: 79 --------------NVNGGD------------ISPFNPIIMIRGGGGSSEGTSREREENN 112
N + D I+PFN I+++G S ++R++ +N+
Sbjct: 590 LQGIRAGLTSESHENTDSDDRVREREREHVILINPFNQTIIVQG----SYDSNRDQSDNH 757
Query: 113 EFELFYEDGAGSGLRALPPRMSELILGSGFERVMEQLSHVEANRSGNEGHNQQHLPALKS 172
GA + + +G G + +++ LS + NR G PA K
Sbjct: 758 N-----PIGA----------LGDYFVGPGLDLLLQHLSENDPNRYGTP-------PAPKE 871
Query: 173 AVELLPTIEINESHMNVESHCAVCKEPFELGISAREMPCK 212
AVE LPT++INE+ C+VC + FE+G A+EMPCK
Sbjct: 872 AVESLPTVKINEN-----LQCSVCLDDFEVGSEAKEMPCK 976
Score = 36.2 bits (82), Expect = 0.022
Identities = 21/64 (32%), Positives = 35/64 (53%), Gaps = 6/64 (9%)
Frame = +3
Query: 201 ELGISAREMPCKHIYHNECILPWLA--IQNSCPVCRHELPCESPQINNEIS----NSNED 254
+L + + KH +H C+ P LA SCPVCR +L + P+ ++++S N +D
Sbjct: 942 KLVLKLKRCHVKHRFHR-CLYPTLAGAFIVSCPVCRSQLRVDEPKQDSDVSRNHRNQRDD 1118
Query: 255 ENVG 258
E +G
Sbjct: 1119 EIIG 1130
>BE202606 similar to GP|4651204|dbj ring finger protein {Cicer arietinum},
partial (87%)
Length = 564
Score = 68.2 bits (165), Expect = 5e-12
Identities = 41/130 (31%), Positives = 59/130 (44%), Gaps = 1/130 (0%)
Frame = +1
Query: 103 GTSREREENNEFELFYEDGAGSGLRALPPRMSELILGSGFERVMEQLSHVEANRSGNEGH 162
G E E N L DG SG + ++ + QL ++ G+
Sbjct: 211 GLEHEDESLNNLYLAVHDGIISG-------------NTDYDILFGQLLENDSGLKGSP-- 345
Query: 163 NQQHLPALKSAVELLPTIEINESHMNVESH-CAVCKEPFELGISAREMPCKHIYHNECIL 221
PA KS VE LP +E+ E + + CAVCK+ + ++PC H YH +CIL
Sbjct: 346 -----PAAKSFVENLPLVELTEEELKEKDVVCAVCKDEVTVEEKVGKLPCSHCYHGDCIL 510
Query: 222 PWLAIQNSCP 231
PW+ I N+CP
Sbjct: 511 PWMNISNTCP 540
>TC90096 similar to PIR|T47832|T47832 hypothetical protein T2O9.60 -
Arabidopsis thaliana, partial (13%)
Length = 676
Score = 66.2 bits (160), Expect = 2e-11
Identities = 34/98 (34%), Positives = 53/98 (53%), Gaps = 7/98 (7%)
Frame = +1
Query: 168 PALKSAVEL-LPTIEINESHMNVESH------CAVCKEPFELGISAREMPCKHIYHNECI 220
P KS E +PTI + ++ + + CAVCKE + A+++PC H+YH +CI
Sbjct: 280 PPPKSRTETSIPTITVTQTLLTLLDPSNGVVICAVCKETVSVDEEAKQLPCDHLYHADCI 459
Query: 221 LPWLAIQNSCPVCRHELPCESPQINNEISNSNEDENVG 258
PWL I++SCP+CR C + + + +D N G
Sbjct: 460 TPWLRIRSSCPLCR----CGIVEDEEDEDDEEDDINGG 561
Score = 30.4 bits (67), Expect = 1.2
Identities = 12/35 (34%), Positives = 20/35 (56%), Gaps = 3/35 (8%)
Frame = +1
Query: 1 MSSHWCYRCNKFVRVWRLGMP---ICPDCDSGFLE 32
+ ++WC+ C+ V + P +CP CD+ FLE
Sbjct: 85 LKTYWCHECDMSVSLTTSLTPSPLLCPHCDTHFLE 189
>TC91547 weakly similar to GP|6815070|dbj|BAA90357.1 EST AU070319(S10788)
corresponds to a region of the predicted gene.~Similar
to RING-H2 finger, partial (24%)
Length = 601
Score = 58.5 bits (140), Expect = 4e-09
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Frame = +1
Query: 170 LKSAVELLPTIEINESHMNVESHCAVCKEPFELGISAREMPCKHIYHNECILPWLA-IQN 228
+K E PTI N+ +N C+VC FE G R + CKH +H +C+ WL
Sbjct: 247 IKFIEEKNPTIRYNKK-LNSHGDCSVCLSEFEEGEKVRRLKCKHTFHKDCLDKWLQDYFA 423
Query: 229 SCPVCRHELPCES------PQINNEISNSNEDENVGLTIWRLPGG 267
+CP+CR ++ ++ Q N + + DEN+ ++ L GG
Sbjct: 424 TCPLCREQVLPDNVVLKHRQQRNQQSNIEGNDENLPYVLFLLRGG 558
>TC79126 similar to PIR|H96703|H96703 probable RING zinc finger protein
T23K23.8 [imported] - Arabidopsis thaliana, partial (81%)
Length = 1397
Score = 54.7 bits (130), Expect = 6e-08
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +3
Query: 190 ESHCAVCKEPFELGISAREMPCKHIYHNECILPWLAIQNSCPVCRHEL 237
++ C +C P+E G+ +PC H +H+ CI+ WL + +CP+C++ +
Sbjct: 1095 DAECCICLCPYEDGVELHTLPCNHHFHSSCIVKWLKMNATCPLCKYNI 1238
>TC79350 similar to PIR|T08944|T08944 hypothetical protein F25O24.10 -
Arabidopsis thaliana, partial (32%)
Length = 1698
Score = 54.3 bits (129), Expect = 8e-08
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Frame = +3
Query: 171 KSAVELLPTIEINESHMNVES-HCAVCKEPFELGISAREMP-CKHIYHNECILPWLAIQN 228
K+A+E LP + + + + C++C FE R +P CKH +H +CI WL +
Sbjct: 405 KTAIESLPFFKFSSLKGSKQGLECSICLSKFEDIEILRLLPKCKHAFHIDCIDHWLEKHS 584
Query: 229 SCPVCRHELPCESPQINNEISNS-----NEDENVGLTIWR 263
SCP+CRH++ E Q SNS +E+ N+ + + R
Sbjct: 585 SCPICRHKVNIED-QTTFAYSNSLRMLVSEESNIEIFVER 701
>TC84456 similar to GP|15450836|gb|AAK96689.1 Unknown protein {Arabidopsis
thaliana}, partial (6%)
Length = 809
Score = 53.9 bits (128), Expect = 1e-07
Identities = 21/45 (46%), Positives = 29/45 (63%)
Frame = +2
Query: 193 CAVCKEPFELGISAREMPCKHIYHNECILPWLAIQNSCPVCRHEL 237
CAVC E G + R +PC H +H +CI PWL ++SCPVC+ +
Sbjct: 41 CAVCLETPVKGDTIRHLPCLHKFHKDCIDPWLGRKSSCPVCKSSI 175
>TC80205 similar to PIR|H96764|H96764 protein RING zinc finger protein
F25P22.18 [imported] - Arabidopsis thaliana, partial
(19%)
Length = 1039
Score = 53.5 bits (127), Expect = 1e-07
Identities = 19/55 (34%), Positives = 31/55 (55%)
Frame = +3
Query: 180 IEINESHMNVESHCAVCKEPFELGISAREMPCKHIYHNECILPWLAIQNSCPVCR 234
I + S ++ C +C+E +E + C+H YH +CI WL ++N CPVC+
Sbjct: 672 ISNDSSKHQIDKKCXICQEEYESDDELGRLXCEHSYHFQCIKQWLVLKNXCPVCK 836
>TC78411 similar to PIR|T47692|T47692 hypothetical protein T22E16.190 -
Arabidopsis thaliana, partial (81%)
Length = 1378
Score = 53.1 bits (126), Expect = 2e-07
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +2
Query: 183 NESHMNVESHCAVCKEPFELGISAREMPCKHIYHNECILPWLAIQNSCPVCR 234
N + E C+VC E +G R +PC H +H CI PWL Q +CPVC+
Sbjct: 848 NSKASDDELTCSVCLEQVNVGDVLRSLPCLHQFHASCIDPWLRQQGTCPVCK 1003
>AJ498940 similar to PIR|G96742|G967 unknown protein F17M19.13 [imported] -
Arabidopsis thaliana, partial (4%)
Length = 514
Score = 52.8 bits (125), Expect = 2e-07
Identities = 30/91 (32%), Positives = 43/91 (46%), Gaps = 8/91 (8%)
Frame = +3
Query: 179 TIEINESHMNVESHCAVCKEPFELGISAREMP-CKHIYHNECILPWLAIQNSCPVCRHEL 237
T + E+ N CA+C E F +G R +P CKHI+H +C+ WL CP+CR +
Sbjct: 213 TTKKEENGSNPLDICAICLENFTIGDKCRLLPICKHIFHAQCVDKWLLKTPICPICRSRV 392
Query: 238 PCESPQINNEISNSNED-------ENVGLTI 261
C + N+ D NVGL +
Sbjct: 393 -CSHSANKVVLGNNGRDSIESGLSRNVGLEL 482
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.318 0.136 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,132,684
Number of Sequences: 36976
Number of extensions: 221551
Number of successful extensions: 2212
Number of sequences better than 10.0: 168
Number of HSP's better than 10.0 without gapping: 1618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2177
length of query: 391
length of database: 9,014,727
effective HSP length: 98
effective length of query: 293
effective length of database: 5,391,079
effective search space: 1579586147
effective search space used: 1579586147
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC124953.18