BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC123976.3 - phase: 0
(447 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF649289 weakly similar to GP|16604683|gb putative ABC transport... 303 9e-83
BQ138652 similar to GP|20522008|d pleiotropic drug resistance li... 302 2e-82
TC80149 similar to GP|22137204|gb|AAM91447.1 At2g01320/F10A8.20 ... 133 1e-31
TC81334 weakly similar to GP|19423992|gb|AAL87274.1 putative ABC... 74 2e-28
TC86205 similar to PIR|A86289|A86289 probable ABC transporter [i... 99 3e-21
TC84278 similar to PIR|T02567|T02567 probable ATP-binding casset... 93 2e-19
TC91754 similar to GP|20260310|gb|AAM13053.1 unknown protein {Ar... 86 2e-17
TC81415 weakly similar to PIR|A84509|A84509 probable ABC transpo... 74 9e-14
BE205528 similar to GP|12382006|d putative ABC transporter prote... 70 2e-12
BQ139036 similar to GP|14423315|g ATP-binding cassette transport... 69 3e-12
TC93805 weakly similar to GP|11994269|dbj|BAB01452. ABC transpor... 69 4e-12
TC88124 weakly similar to PIR|T45888|T45888 ABC transporter-like... 67 1e-11
AJ499813 similar to GP|9279716|db ABC transporter {Arabidopsis t... 67 2e-11
TC89547 similar to GP|12382007|dbj|BAB21276. putative ABC transp... 63 3e-10
AW560126 similar to GP|15292753|gb putative ABC transporter prot... 61 1e-09
TC82289 similar to GP|12382007|dbj|BAB21276. putative ABC transp... 61 1e-09
TC93816 similar to GP|9279716|dbj|BAB01273.1 ABC transporter {Ar... 60 1e-09
AW685718 homologue to GP|20522008|d pleiotropic drug resistance ... 59 4e-09
BF633427 similar to GP|22128707|gb| putative ABC transporter {Or... 58 6e-09
TC86206 similar to GP|20522008|dbj|BAB92011. pleiotropic drug re... 58 6e-09
>BF649289 weakly similar to GP|16604683|gb putative ABC transporter protein
{Arabidopsis thaliana}, partial (12%)
Length = 654
Score = 303 bits (776), Expect = 9e-83
Identities = 153/154 (99%), Positives = 153/154 (99%)
Frame = +3
Query: 1 MDSNLSRSISRSLSRSSWKMEEVFASGRYSRRTSQVDEDEEALKWAAIEKLPTYDRLRTS 60
MDSNLSRSISRSLSRSSWKMEEVFASGRYSRRTSQVDEDEEALKWAAIEKLPTYDRLRTS
Sbjct: 192 MDSNLSRSISRSLSRSSWKMEEVFASGRYSRRTSQVDEDEEALKWAAIEKLPTYDRLRTS 371
Query: 61 IMQTFTEGDQPQPGNRQQHKEVDVTKLDMNERQQIIDKIFKVAEEDNEKYLRKFRNRIDK 120
IMQTFTEGDQPQPGNRQQHKEVDVTKLDMNERQQIIDKIFKVAEEDNEKYLRKFRNRIDK
Sbjct: 372 IMQTFTEGDQPQPGNRQQHKEVDVTKLDMNERQQIIDKIFKVAEEDNEKYLRKFRNRIDK 551
Query: 121 VGIRLPTVEVRFKNLTVEADSFVGSRALPTLPNT 154
VGIRLPTVEVRFKNLTVEADSFVGS ALPTLPNT
Sbjct: 552 VGIRLPTVEVRFKNLTVEADSFVGSXALPTLPNT 653
>BQ138652 similar to GP|20522008|d pleiotropic drug resistance like protein
{Nicotiana tabacum}, partial (15%)
Length = 670
Score = 302 bits (773), Expect = 2e-82
Identities = 140/202 (69%), Positives = 176/202 (86%)
Frame = +2
Query: 246 DVHVGEMTVKETLDFSARCQGVGTRYDLLSELARREKEAGIFPEAELDLFMKATAVKGTE 305
D+H+GEMTV+ETL FSAR QGVG RYDLL+EL+RREK A I P+ ++D++MKA A +G +
Sbjct: 2 DLHIGEMTVRETLAFSARVQGVGPRYDLLAELSRREKHANIMPDPDIDVYMKAIATEGQK 181
Query: 306 SSLITDYTLKILGLDICKDTIVGDEMNRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGL 365
++LITDY L+ILGL+IC DT+VG+ M RG+SGGQKKRVTTGEM+VGP K LFMDEISTGL
Sbjct: 182 ANLITDYVLRILGLEICADTVVGNAMLRGISGGQKKRVTTGEMLVGPAKALFMDEISTGL 361
Query: 366 DSSTTFQIVKCLQQIVHLTEGTILMSLLQPAPETFDLFDDIILISEGQVVYQGPREHIVE 425
DSSTTFQIV ++Q VH+ +GT ++SLLQP PET++LFDDIIL+S+ ++YQGPREH++E
Sbjct: 362 DSSTTFQIVNSMKQFVHILKGTAVISLLQPPPETYNLFDDIILLSDSHIIYQGPREHVLE 541
Query: 426 FFESCGFRCPERKGTADFLQEV 447
FFES GF+CP+RKG ADFLQEV
Sbjct: 542 FFESIGFKCPDRKGVADFLQEV 607
>TC80149 similar to GP|22137204|gb|AAM91447.1 At2g01320/F10A8.20
{Arabidopsis thaliana}, partial (44%)
Length = 1366
Score = 133 bits (335), Expect = 1e-31
Identities = 87/273 (31%), Positives = 140/273 (50%), Gaps = 3/273 (1%)
Frame = +3
Query: 178 ILKNASGIVKPSRMALLLGPPSSGKTTLLLALAGKLDSE--LRVQGDITYNGHRLNEFVP 235
+LKN SG KP R+ ++GP SGKTTLL LAG+L + L + G + +NG +
Sbjct: 402 LLKNLSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLSASPRLHLSGLLEFNGKPSSRNAY 581
Query: 236 RKTSAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDLLSELARREKEAGIFPEAELDLF 295
+ AY+ Q D+ ++TV+ETL + Q L ++ E E D +
Sbjct: 582 K--FAYVRQEDLFFSQLTVRETLSLAIELQ--------LHNISSAE---------ERDEY 704
Query: 296 MKATAVKGTESSLITDYTLKILGLDICKDTIVGDEMNRGVSGGQKKRVTTGEMIVGPTKT 355
+ K GL C DT VGD RG+SGG+KKR++ ++
Sbjct: 705 VNNLLFK--------------TGLVSCADTNVGDAKVRGISGGEKKRLSLACELLASPSV 842
Query: 356 LFMDEISTGLDSSTTFQIVKCLQQIVHLTEGTILMSLLQPAPETFDLFDDIILISEGQVV 415
+F DE +TGLD+ ++++ L+Q+ L T++ S+ QP + FDDI+L+++G +V
Sbjct: 843 IFADEPTTGLDAFQAEKVMETLRQLA-LDGHTVICSIHQPRGSVYSKFDDIVLLTDGSLV 1019
Query: 416 YQGPR-EHIVEFFESCGFRCPERKGTADFLQEV 447
Y GP + + +F G+ CP+ A+FL ++
Sbjct: 1020YAGPAGDEPLTYFSKFGYHCPDHVNPAEFLADL 1118
>TC81334 weakly similar to GP|19423992|gb|AAL87274.1 putative ABC
transporter protein {Arabidopsis thaliana}, partial
(29%)
Length = 977
Score = 73.9 bits (180), Expect(2) = 2e-28
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Frame = +2
Query: 177 TILKNASGIVKPSRMALLLGPPSSGKTTLLLALAGKLDSELRVQGDITYNGHRLNEFVPR 236
+IL+ +G KP+++ ++GP GK+TLL ALAG+L S R GDI NG++ + +
Sbjct: 131 SILQGLTGYAKPAQLLAIMGPSGCGKSTLLDALAGRLGSNTRQSGDILINGNK--QALAY 304
Query: 237 KTSAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDLLSELARREKEAGIFPEAELDLFM 296
TSAY++Q+D + +TVKE + +SA+ Q D +S ++E+
Sbjct: 305 GTSAYVTQDDTLLTTLTVKEAVYYSAQLQ----LPDTMSNEEKKER-------------- 430
Query: 297 KATAVKGTESSLITDYTLKILGL-DICKDTIVGDEMNRGVSGGQKKR 342
D+T++ +GL D + +G+SGGQK+R
Sbjct: 431 -------------ADFTIREMGLQDAINTRNRKGGVLKGISGGQKRR 532
Score = 70.1 bits (170), Expect(2) = 2e-28
Identities = 39/110 (35%), Positives = 63/110 (56%), Gaps = 2/110 (1%)
Frame = +3
Query: 337 GGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLT--EGTILMSLLQ 394
G +K V+ I+ + LF+DE ++GLDS+ ++ ++K + + + TI+ S+ Q
Sbjct: 516 GVKKGEVSISIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDKKDGIQRTIVASIHQ 695
Query: 395 PAPETFDLFDDIILISEGQVVYQGPREHIVEFFESCGFRCPERKGTADFL 444
P+ E F LF ++ L+S G+ VY GP EFF S GF CP + +D L
Sbjct: 696 PSTEVFQLFHNLCLLSSGKTVYFGPASAASEFFASNGFPCPPLQNPSDHL 845
>TC86205 similar to PIR|A86289|A86289 probable ABC transporter [imported] -
Arabidopsis thaliana, partial (52%)
Length = 2721
Score = 99.0 bits (245), Expect = 3e-21
Identities = 69/260 (26%), Positives = 125/260 (47%), Gaps = 5/260 (1%)
Frame = +1
Query: 175 KLTILKNASGIVKPSRMALLLGPPSSGKTTLLLALAGKLDSELRVQGDITYNGHRLNEFV 234
+L +LK SG +P + L+G +GKTTL+ LAG+ + GDI +G+ +
Sbjct: 751 RLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-IDGDIKVSGYPKKQET 927
Query: 235 PRKTSAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDLLSELARREKEAGIFPEAELDL 294
+ S Y QND+H +TV E+L +SA +
Sbjct: 928 FARISGYCEQNDIHSPHVTVYESLLYSAWLR----------------------------- 1020
Query: 295 FMKATAVKGTESSLITDYTLKILGLDICKDTIVGDEMNRGVSGGQKKRVTTGEMIVGPTK 354
+ V + D + ++ L+ ++++VG G+S Q+KR+T +V
Sbjct: 1021--LPSGVDSNTRKMFIDEVMDLVELNSLRNSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1194
Query: 355 TLFMDEISTGLDSSTTFQIVKCLQQIVHLTEGTILMSLLQPAPETFDLFDDIILISE-GQ 413
+FMDE ++GLD+ +++ ++ V T T++ ++ QP+ + F+ FD++ L+ GQ
Sbjct: 1195IIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1371
Query: 414 VVYQGP----REHIVEFFES 429
+Y GP H++++FES
Sbjct: 1372EIYVGPLGRHSTHLIKYFES 1431
>TC84278 similar to PIR|T02567|T02567 probable ATP-binding cassette protein
T16B24.1 - Arabidopsis thaliana, partial (28%)
Length = 835
Score = 92.8 bits (229), Expect = 2e-19
Identities = 49/127 (38%), Positives = 74/127 (57%)
Frame = +3
Query: 317 LGLDICKDTIVGDEMNRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKC 376
LGL T++GDE +RGVSGG+++RV+ G I+ LF+DE ++GLDS++ F +VK
Sbjct: 117 LGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKV 296
Query: 377 LQQIVHLTEGTILMSLLQPAPETFDLFDDIILISEGQVVYQGPREHIVEFFESCGFRCPE 436
LQ+I + ++MS+ QP+ L D +I +S GQ VY G + +F G PE
Sbjct: 297 LQRIAQ-SGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPSQLPSYFAEFGHPIPE 473
Query: 437 RKGTADF 443
+F
Sbjct: 474 GDNRTEF 494
>TC91754 similar to GP|20260310|gb|AAM13053.1 unknown protein {Arabidopsis
thaliana}, partial (25%)
Length = 663
Score = 86.3 bits (212), Expect = 2e-17
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 3/209 (1%)
Frame = +2
Query: 159 LESLIGLFGFNTTKRTKLTILKNASGIVKPSRMALLLGPPSSGKTTLLLALAGKLDSELR 218
L ++ FG TKR +L +G +P R+ ++GP SGK+TLL LAG+L +
Sbjct: 155 LRVMLPNFGKGPTKR----LLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGRLAKNVV 322
Query: 219 VQGDITYNGHRLNE---FVPRKTSAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDLLS 275
+ G++ NG + FV AY++Q DV +G +TVKET+ +SA + L S
Sbjct: 323 MTGNVFLNGKKKTPGYGFV-----AYVTQEDVLLGTLTVKETITYSAHLR-------LPS 466
Query: 276 ELARREKEAGIFPEAELDLFMKATAVKGTESSLITDYTLKILGLDICKDTIVGDEMNRGV 335
+++ E + G + D T+ +GL C D ++G+ G+
Sbjct: 467 TMSKEE-------------------ING-----LVDATIIEMGLHDCADRLIGNWHLXGI 574
Query: 336 SGGQKKRVTTGEMIVGPTKTLFMDEISTG 364
SGG++KR + I+ + LF+DE ++G
Sbjct: 575 SGGERKRTSIALEILTRPRXLFLDEPTSG 661
>TC81415 weakly similar to PIR|A84509|A84509 probable ABC transporter
[imported] - Arabidopsis thaliana, partial (13%)
Length = 702
Score = 74.3 bits (181), Expect = 9e-14
Identities = 57/192 (29%), Positives = 93/192 (47%), Gaps = 1/192 (0%)
Frame = +2
Query: 170 TTKRTKLTILKNASGIVKPSRMALLLGPPSSGKTTLLLALAGKLDSELRVQGDITYNGHR 229
T K + ILK+ S + + S + ++GP +GK+TLL +AG++ + I+ N H
Sbjct: 212 TQKPHPVNILKSVSFVARTSEIVAVVGPSGTGKSTLLRIIAGRIKDKDFNPKTISINDHP 391
Query: 230 LN-EFVPRKTSAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDLLSELARREKEAGIFP 288
++ RK ++SQ D + +TVKETL F A+ + L E+ +E+E
Sbjct: 392 MSTPSQLRKICGFVSQEDNLLPLLTVKETLLFGAKFR--------LKEMTPKERE----- 532
Query: 289 EAELDLFMKATAVKGTESSLITDYTLKILGLDICKDTIVGDEMNRGVSGGQKKRVTTGEM 348
L + ++ LGL + VGD+ NRGVSGG++KRV+ G
Sbjct: 533 -------------------LRVENLMQELGLFHVAHSFVGDDENRGVSGGERKRVSIGVD 655
Query: 349 IVGPTKTLFMDE 360
++ L +DE
Sbjct: 656 MIHNPPILVLDE 691
>BE205528 similar to GP|12382006|d putative ABC transporter protein {Oryza
sativa (japonica cultivar-group)}, partial (14%)
Length = 617
Score = 69.7 bits (169), Expect = 2e-12
Identities = 51/215 (23%), Positives = 103/215 (47%), Gaps = 5/215 (2%)
Frame = +1
Query: 219 VQGDITYNGHRLNEFVPRKTSAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDLLSELA 278
+ G+IT +G + + S Y QND+H +TV E+L +SA +
Sbjct: 4 IGGNITISGFPKKQETFARISGYCEQNDIHSPYVTVYESLLYSAWLR------------- 144
Query: 279 RREKEAGIFPEAELDLFMKATAVKGTESSLITDYTLKILGLDICKDTIVGDEMNRGVSGG 338
+ P+ + + + ++++ L ++ +VG G+S
Sbjct: 145 -------LSPD-----------INAETRKMFVEEVMELVELKPLQNALVGLPGVNGLSTE 270
Query: 339 QKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLTEGTILMSLLQPAPE 398
Q+KR+T +V +FMDE ++GLD+ +++ ++ V+ T T++ ++ QP+ +
Sbjct: 271 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVN-TGRTVVCTIHQPSID 447
Query: 399 TFDLFDDIILISE-GQVVYQGPREH----IVEFFE 428
F+ FD+++L+ + GQ +Y GP H ++ +FE
Sbjct: 448 IFESFDELLLLKQGGQEIYVGPLGHNSSNLINYFE 552
>BQ139036 similar to GP|14423315|g ATP-binding cassette transporter Atr5
{Mycosphaerella graminicola}, partial (14%)
Length = 673
Score = 69.3 bits (168), Expect = 3e-12
Identities = 43/143 (30%), Positives = 84/143 (58%), Gaps = 6/143 (4%)
Frame = +1
Query: 311 DYTLKILGLDICKDTIVGDEMNRGVSGGQKKRVTTG-EMIVGPTKTLFMDEISTGLDSST 369
D +++L L + T++G + G+S Q+KRVT G E++ P+ +F+DE ++GLD
Sbjct: 13 DTIIELLELYDLEHTLIG-RVGAGLSVEQRKRVTIGVELVSKPSILIFLDEPTSGLDGQA 189
Query: 370 TFQIVKCLQQIVHLTEGTILMSLLQPAPETFDLFDDIILISE-GQVVYQGP----REHIV 424
F V+ L+++ + + +L+++ QP+ + F FD ++L+++ G+ VY G + +
Sbjct: 190 AFNTVRFLRKLADVGQ-AVLVTIHQPSAQLFAQFDTLLLLAKGGKTVYFGEIGDNGDTVK 366
Query: 425 EFFESCGFRCPERKGTADFLQEV 447
E+F+ G CP A+F+ +V
Sbjct: 367 EYFDRNGVPCPRDVNPAEFMIDV 435
>TC93805 weakly similar to GP|11994269|dbj|BAB01452. ABC transporter-like
protein {Arabidopsis thaliana}, partial (15%)
Length = 649
Score = 68.9 bits (167), Expect = 4e-12
Identities = 36/94 (38%), Positives = 58/94 (61%)
Frame = +2
Query: 172 KRTKLTILKNASGIVKPSRMALLLGPPSSGKTTLLLALAGKLDSELRVQGDITYNGHRLN 231
K +IL+ +G KP ++ ++GP GK+TLL LAG+L S R G+I NGH+
Sbjct: 248 KNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLSSNTRQTGEILINGHK-- 421
Query: 232 EFVPRKTSAYISQNDVHVGEMTVKETLDFSARCQ 265
+ + TSAY++Q+D + +TV+E + +SA+ Q
Sbjct: 422 QELSYGTSAYVTQDDTLLTTLTVREAVFYSAQLQ 523
>TC88124 weakly similar to PIR|T45888|T45888 ABC transporter-like protein -
Arabidopsis thaliana, partial (27%)
Length = 1641
Score = 67.4 bits (163), Expect = 1e-11
Identities = 38/116 (32%), Positives = 70/116 (59%), Gaps = 5/116 (4%)
Frame = +3
Query: 319 LDICKDTIVGDEMNRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQ 378
LD KD++VG G+S Q+KR+T +V +FMDE ++GLD+ +++ ++
Sbjct: 9 LDDIKDSLVGIAGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVK 188
Query: 379 QIVHLTEGTILMSLLQPAPETFDLFDDIILI-SEGQVVYQGPREH----IVEFFES 429
+V T T + ++ QP+ + F+ FD++IL+ S G+++Y G H ++E+F+S
Sbjct: 189 NVV-TTGRTTVCTIHQPSIDIFETFDELILMKSGGKIIYNGALGHHSSRLIEYFQS 353
>AJ499813 similar to GP|9279716|db ABC transporter {Arabidopsis thaliana},
partial (13%)
Length = 573
Score = 66.6 bits (161), Expect = 2e-11
Identities = 42/133 (31%), Positives = 72/133 (53%), Gaps = 5/133 (3%)
Frame = -3
Query: 301 VKGTESSLITDYTLKILGLDICKDTIVGDEMNRGVSGGQKKRVTTGEMIVGPTKTLFMDE 360
V E + + ++ L KD IVG G+S Q+KR+T +V +FMDE
Sbjct: 559 VGNEEKMQFVEQVMDLVELQSLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDE 380
Query: 361 ISTGLDSSTTFQIVKCLQQIVHLTEGTILMSLLQPAPETFDLFDDIILISE-GQVVYQGP 419
++GLD+ +++ ++ V T T++ ++ QP+ + F+ FD++IL+ GQ+VY GP
Sbjct: 379 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELILMKRGGQLVYGGP 203
Query: 420 ----REHIVEFFE 428
I+E+FE
Sbjct: 202 LGRNSHKIIEYFE 164
>TC89547 similar to GP|12382007|dbj|BAB21276. putative ABC transporter
protein {Oryza sativa (japonica cultivar-group)},
partial (28%)
Length = 1283
Score = 62.8 bits (151), Expect = 3e-10
Identities = 34/122 (27%), Positives = 72/122 (58%), Gaps = 5/122 (4%)
Frame = +3
Query: 313 TLKILGLDICKDTIVGDEMNRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQ 372
+++++ L+ ++ +VG G+S Q+KR+T +V +FMDE ++GLD+
Sbjct: 3 SMELVELNSLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 182
Query: 373 IVKCLQQIVHLTEGTILMSLLQPAPETFDLFDDIILIS-EGQVVYQGPR----EHIVEFF 427
+++ ++ V T T++ ++ QP+ + FD FD+++L+ G+ +Y GP H++ +F
Sbjct: 183 VMRTVRNTVD-TGRTVVCTIHQPSIDIFDAFDELLLMKLGGEQIYSGPLGRHCAHLIHYF 359
Query: 428 ES 429
E+
Sbjct: 360 EA 365
>AW560126 similar to GP|15292753|gb putative ABC transporter protein
{Arabidopsis thaliana}, partial (17%)
Length = 727
Score = 60.8 bits (146), Expect = 1e-09
Identities = 47/151 (31%), Positives = 74/151 (48%)
Frame = +3
Query: 178 ILKNASGIVKPSRMALLLGPPSSGKTTLLLALAGKLDSELRVQGDITYNGHRLNEFVPRK 237
IL N +GI P + +LGP SGK+TLL +LAG+L + + G I N +L+ + R+
Sbjct: 372 ILNNVTGIAYPGEILAILGPSGSGKSTLLNSLAGRLHTH-NLTGTILANSSKLDRTILRR 548
Query: 238 TSAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDLLSELARREKEAGIFPEAELDLFMK 297
T +++Q+D+ +TV+ETL F + + L +L R
Sbjct: 549 T-GFVTQDDILYPHLTVRETLVFCSMLR-------LPRQLTRE----------------- 653
Query: 298 ATAVKGTESSLITDYTLKILGLDICKDTIVG 328
T V ES++ LGL C++TI+G
Sbjct: 654 -TKVAAAESAIAE------LGLTKCENTIIG 725
>TC82289 similar to GP|12382007|dbj|BAB21276. putative ABC transporter
protein {Oryza sativa (japonica cultivar-group)},
partial (25%)
Length = 1108
Score = 60.8 bits (146), Expect = 1e-09
Identities = 34/126 (26%), Positives = 73/126 (56%), Gaps = 5/126 (3%)
Frame = +3
Query: 308 LITDYTLKILGLDICKDTIVGDEMNRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDS 367
+ + ++++ L ++ +VG G+S Q+KR+T +V +FMDE ++GLD+
Sbjct: 123 MFVEEVMELVELKPLQNALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 302
Query: 368 STTFQIVKCLQQIVHLTEGTILMSLLQPAPETFDLFDDIILISE-GQVVYQGPREH---- 422
+++ ++ V+ T T++ ++ QP+ + F+ FD+++L+ + GQ +Y GP H
Sbjct: 303 RAAAIVMRTVRNTVN-TGRTVVCTIHQPSIDIFESFDELLLLKQGGQEIYVGPLGHNSSN 479
Query: 423 IVEFFE 428
++ +FE
Sbjct: 480 LINYFE 497
>TC93816 similar to GP|9279716|dbj|BAB01273.1 ABC transporter {Arabidopsis
thaliana}, partial (16%)
Length = 743
Score = 60.5 bits (145), Expect = 1e-09
Identities = 35/109 (32%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Frame = +1
Query: 326 IVGDEMNRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLTE 385
IVG G+S Q+KR+T ++ +FMDE ++GLD+ +++ ++ V T
Sbjct: 1 IVGLPGVTGLSTEQRKRLTIAVELIANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TG 177
Query: 386 GTILMSLLQPAPETFDLFDDIILISE-GQVVYQGP----REHIVEFFES 429
T++ ++ QP+ + F+ FD+++L+ GQV+Y GP I+E+FE+
Sbjct: 178 RTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEA 324
>AW685718 homologue to GP|20522008|d pleiotropic drug resistance like protein
{Nicotiana tabacum}, partial (12%)
Length = 613
Score = 58.9 bits (141), Expect = 4e-09
Identities = 34/134 (25%), Positives = 74/134 (54%), Gaps = 5/134 (3%)
Frame = +2
Query: 301 VKGTESSLITDYTLKILGLDICKDTIVGDEMNRGVSGGQKKRVTTGEMIVGPTKTLFMDE 360
V + + ++++ L+ ++++VG G+S Q+KR+T +V +FMDE
Sbjct: 68 VDSNTRKMFIEEVMELVELNPLRNSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 247
Query: 361 ISTGLDSSTTFQIVKCLQQIVHLTEGTILMSLLQPAPETFDLFDDIILISE-GQVVYQGP 419
++GLD+ +++ ++ V T T++ ++ QP+ + F+ FD++ L+ G+ +Y GP
Sbjct: 248 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGEEIYVGP 424
Query: 420 ----REHIVEFFES 429
++++FES
Sbjct: 425 LGRHSSQLIKYFES 466
>BF633427 similar to GP|22128707|gb| putative ABC transporter {Oryza sativa
(japonica cultivar-group)}, partial (10%)
Length = 384
Score = 58.2 bits (139), Expect = 6e-09
Identities = 29/86 (33%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = +1
Query: 332 NRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIV--HLTEGTIL 389
++G+SGGQ++R++ I+ + LF+DE ++GLDS+ ++ ++ + + + TI+
Sbjct: 127 SKGLSGGQRRRLSICIEILTHPRLLFLDEPTSGLDSAASYYVMSTIASLSLRDDIQRTIV 306
Query: 390 MSLLQPAPETFDLFDDIILISEGQVV 415
+ QP+ E F LFDD+ L+S G+ V
Sbjct: 307 AFIHQPSSEVFQLFDDLCLLSSGETV 384
>TC86206 similar to GP|20522008|dbj|BAB92011. pleiotropic drug resistance
like protein {Nicotiana tabacum}, partial (11%)
Length = 757
Score = 58.2 bits (139), Expect = 6e-09
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +3
Query: 175 KLTILKNASGIVKPSRMALLLGPPSSGKTTLLLALAGKLDSELRVQGDITYNGHRLNEFV 234
+L +LK SG +P + L+G +GKTTL+ LAG+ + GDI +G+ +
Sbjct: 324 RLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-IDGDIKVSGYPKKQET 500
Query: 235 PRKTSAYISQNDVHVGEMTVKETLDFSA 262
+ S Y QND+H +TV E+L +SA
Sbjct: 501 FARISGYCEQNDIHSPHVTVYESLLYSA 584
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.135 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,734,336
Number of Sequences: 36976
Number of extensions: 123471
Number of successful extensions: 782
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of query: 447
length of database: 9,014,727
effective HSP length: 99
effective length of query: 348
effective length of database: 5,354,103
effective search space: 1863227844
effective search space used: 1863227844
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC123976.3