BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC123898.6 - phase: 0 /pseudo
(478 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF636819 57 1e-08
BG583840 GP|20146556|gb ATP synthase alpha subunit {Clethra barb... 44 1e-04
BG583961 similar to GP|14599408|em probable major surface glycop... 40 0.002
TC85487 homologue to SP|P49688|RS2_ARATH 40S ribosomal protein S... 40 0.003
TC76523 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - ... 39 0.006
TC83571 similar to PIR|T10552|T10552 hypothetical protein T12G13... 39 0.006
AW694149 similar to GP|9279805|dbj AmiB {Dictyostelium discoideu... 38 0.007
TC80046 similar to SP|P22699|GUN6_DICDI Endoglucanase precursor ... 37 0.022
TC88257 weakly similar to PIR|G96668|G96668 protein F1N19.7 [imp... 36 0.028
TC80581 similar to GP|19683021|gb|AAL92644.1 hypothetical protei... 36 0.028
TC85851 similar to PIR|T12180|T12180 probable transcription fact... 35 0.048
TC79934 similar to GP|20259633|gb|AAM14173.1 putative GAR1 prote... 35 0.063
BG644345 weakly similar to GP|19697333|gb putative protein poten... 35 0.063
TC89480 similar to GP|20260684|gb|AAM13240.1 unknown protein {Ar... 35 0.063
BG586379 similar to PIR|T03442|T034 glycine-rich protein - rice,... 35 0.063
CA859989 similar to GP|18308125|gb bromodomain-containing protei... 35 0.083
TC81797 similar to GP|17065224|gb|AAL32766.1 Unknown protein {Ar... 34 0.11
CB065311 similar to PIR|C83375|C83 probable glycosyl hydrolase P... 34 0.11
BF521488 weakly similar to GP|18447433|gb RE28280p {Drosophila m... 34 0.11
TC79561 similar to GP|14194107|gb|AAK56248.1 At1g77260/T14N5_19 ... 34 0.11
>BF636819
Length = 635
Score = 57.4 bits (137), Expect = 1e-08
Identities = 33/83 (39%), Positives = 52/83 (61%)
Frame = +1
Query: 229 LNVMN*ASPRIRRWLIILVV*KVHCKRRWDYRLFGPLLKRHT*LSKAELIEKSLRNFSNF 288
LN+MN A+PRI +WL+ LVV*K CK R D +LFGPLLKR T + + ++ ++ +R+ F
Sbjct: 1 LNIMNWANPRIIKWLVTLVV*KDPCKGRGDCKLFGPLLKRPT-VFRHQVTKRRVRH-QRF 174
Query: 289 RRYSPQNQADDKEKSAAIKDSNH 311
+ Y + ++ A + N+
Sbjct: 175 KSY**DEHSSAQQGKAPFQKQNN 243
>BG583840 GP|20146556|gb ATP synthase alpha subunit {Clethra barbinervis},
partial (17%)
Length = 585
Score = 43.9 bits (102), Expect = 1e-04
Identities = 21/27 (77%), Positives = 22/27 (80%)
Frame = +1
Query: 39 TTTETTTTATTTETSTTETTTTKTTTT 65
TTT TTTT TTT T+TT TTTT TTTT
Sbjct: 1 TTTTTTTTTTTTTTTTTTTTTTTTTTT 81
Score = 43.9 bits (102), Expect = 1e-04
Identities = 21/27 (77%), Positives = 22/27 (80%)
Frame = +1
Query: 38 TTTTETTTTATTTETSTTETTTTKTTT 64
TTTT TTTT TTT T+TT TTTT TTT
Sbjct: 1 TTTTTTTTTTTTTTTTTTTTTTTTTTT 81
Score = 42.0 bits (97), Expect = 5e-04
Identities = 20/26 (76%), Positives = 21/26 (79%)
Frame = +1
Query: 43 TTTTATTTETSTTETTTTKTTTTPTT 68
TTTT TTT T+TT TTTT TTTT TT
Sbjct: 4 TTTTTTTTTTTTTTTTTTTTTTTTTT 81
Score = 42.0 bits (97), Expect = 5e-04
Identities = 20/26 (76%), Positives = 21/26 (79%)
Frame = +1
Query: 43 TTTTATTTETSTTETTTTKTTTTPTT 68
TTTT TTT T+TT TTTT TTTT TT
Sbjct: 1 TTTTTTTTTTTTTTTTTTTTTTTTTT 78
Score = 41.6 bits (96), Expect = 7e-04
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +1
Query: 41 TETTTTATTTETSTTETTTTKTTTTPT 67
T TTTT TTT T+TT TTTT TTTT T
Sbjct: 1 TTTTTTTTTTTTTTTTTTTTTTTTTTT 81
Score = 37.4 bits (85), Expect = 0.013
Identities = 18/27 (66%), Positives = 19/27 (69%)
Frame = +1
Query: 33 TKAPPTTTTETTTTATTTETSTTETTT 59
T TTTT TTTT TTT T+TT TTT
Sbjct: 1 TTTTTTTTTTTTTTTTTTTTTTTTTTT 81
Score = 36.2 bits (82), Expect = 0.028
Identities = 21/43 (48%), Positives = 26/43 (59%)
Frame = +1
Query: 48 TTTETSTTETTTTKTTTTPTTGEEDQL*ILGFVMSTTLMMIIR 90
TTT T+TT TTTT TTTT TT + I +V ++MI R
Sbjct: 4 TTTTTTTTTTTTTTTTTTTTTTTTTTIYIYIYVAIWPVVMINR 132
>BG583961 similar to GP|14599408|em probable major surface glycoprotein
{Pneumocystis carinii}, partial (4%)
Length = 803
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/37 (56%), Positives = 23/37 (61%)
Frame = +2
Query: 32 LTKAPPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
+T TTTT TTT TTT +TT T TT TTT TT
Sbjct: 614 MTTTMTTTTTMTTTMTTTTTMTTTMTMTTTMTTTTTT 724
Score = 40.0 bits (92), Expect = 0.002
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = +2
Query: 33 TKAPPTTTTETTTTATTTETSTTETTTTKTTTTPT 67
T TTT TTTT TTT T TT TTT TT+T T
Sbjct: 632 TTTTMTTTMTTTTTMTTTMTMTTTMTTTTTTSTST 736
Score = 38.1 bits (87), Expect = 0.007
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2
Query: 32 LTKAPPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
+T TT T TTT TT T+TT TTT TTT TT
Sbjct: 602 MTTTMTTTMTTTTTMTTTMTTTTTMTTTMTMTTTMTT 712
Score = 37.7 bits (86), Expect = 0.010
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 32 LTKAPPTTTTETTT-TATTTETSTTETTTTKTTTTPTT 68
+T TTTT TTT T TTT T+TT T+T+ T+T TT
Sbjct: 644 MTTTMTTTTTMTTTMTMTTTMTTTTTTSTSTITSTSTT 757
Score = 37.4 bits (85), Expect = 0.013
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = +2
Query: 40 TTETTTTATTTETSTTETTTTKTTTTPTT 68
TT TTT TT T+TT TTT TTTT TT
Sbjct: 596 TTMTTTMTTTMTTTTTMTTTMTTTTTMTT 682
Score = 36.6 bits (83), Expect = 0.022
Identities = 21/34 (61%), Positives = 22/34 (63%), Gaps = 3/34 (8%)
Frame = +2
Query: 38 TTTTETTTTATTTETSTTE---TTTTKTTTTPTT 68
TTTT TTT TTT T TT TTT TTTT +T
Sbjct: 629 TTTTTMTTTMTTTTTMTTTMTMTTTMTTTTTTST 730
Score = 36.6 bits (83), Expect = 0.022
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +2
Query: 38 TTTTETTTTATTTETSTTETTTTKTTTTPTT 68
T TT TTT TTT T TT TTT T TT T
Sbjct: 599 TMTTTMTTTMTTTTTMTTTMTTTTTMTTTMT 691
Score = 36.6 bits (83), Expect = 0.022
Identities = 19/36 (52%), Positives = 21/36 (57%)
Frame = +2
Query: 33 TKAPPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
T TT T TTT TTT TST+ T+T TT P T
Sbjct: 665 TTTMTTTMTMTTTMTTTTTTSTSTITSTSTTLPPHT 772
Score = 35.4 bits (80), Expect = 0.048
Identities = 21/37 (56%), Positives = 22/37 (58%), Gaps = 1/37 (2%)
Frame = +2
Query: 33 TKAPPTTTTETTTTA-TTTETSTTETTTTKTTTTPTT 68
T TTT TTTT TTT T+TT TTT T TT T
Sbjct: 599 TMTTTMTTTMTTTTTMTTTMTTTTTMTTTMTMTTTMT 709
Score = 35.0 bits (79), Expect = 0.063
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 33 TKAPPTTTTETTTTATTTETSTTETTTTKTTTTP 66
T TTT TTT TTT T++T T T+ +TT P
Sbjct: 662 TTTTMTTTMTMTTTMTTTTTTSTSTITSTSTTLP 763
Score = 30.0 bits (66), Expect = 2.0
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 32 LTKAPPTTTTETTTTATTTETSTTETTTTKTTTT 65
+T TTT TTTT T+T T T+ +TT T+
Sbjct: 674 MTTTMTMTTTMTTTTTTSTSTITSTSTTLPPHTS 775
>TC85487 homologue to SP|P49688|RS2_ARATH 40S ribosomal protein S2.
[Mouse-ear cress] {Arabidopsis thaliana}, partial (88%)
Length = 1114
Score = 39.7 bits (91), Expect = 0.003
Identities = 19/31 (61%), Positives = 23/31 (73%)
Frame = -2
Query: 38 TTTTETTTTATTTETSTTETTTTKTTTTPTT 68
TTT+ TT+T TT+ T+TT TT KTTT TT
Sbjct: 174 TTTSVTTSTTTTSVTTTTTKTTAKTTTISTT 82
Score = 38.1 bits (87), Expect = 0.007
Identities = 18/34 (52%), Positives = 23/34 (66%)
Frame = -2
Query: 35 APPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
A +++T TTTT+ TT T+TT TTT T TT T
Sbjct: 201 ASSSSSTTTTTTSVTTSTTTTSVTTTTTKTTAKT 100
Score = 35.0 bits (79), Expect = 0.063
Identities = 15/32 (46%), Positives = 24/32 (74%)
Frame = -2
Query: 39 TTTETTTTATTTETSTTETTTTKTTTTPTTGE 70
+++ +TTT TT+ T++T TT+ TTTT TT +
Sbjct: 198 SSSSSTTTTTTSVTTSTTTTSVTTTTTKTTAK 103
Score = 34.7 bits (78), Expect = 0.083
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2
Query: 33 TKAPPTTTTETTTTATTTETSTTETTTTKTTT 64
T TT+ TTT+ TTT T TT TTT +TT
Sbjct: 177 TTTTSVTTSTTTTSVTTTTTKTTAKTTTISTT 82
>TC76523 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - alfalfa,
partial (69%)
Length = 1615
Score = 38.5 bits (88), Expect = 0.006
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 33 TKAPPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
TK+ T++T TT +T + TST TTTT +T+T TT
Sbjct: 1220 TKSTSTSSTTPTTKSTASSTSTKSTTTTPSTSTSTT 1113
Score = 37.0 bits (84), Expect = 0.017
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = -3
Query: 36 PPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
P T +T T++T TT+++ + T+T TTTTP+T
Sbjct: 1226 PSTKSTSTSSTTPTTKSTASSTSTKSTTTTPST 1128
Score = 28.5 bits (62), Expect = 5.9
Identities = 12/22 (54%), Positives = 17/22 (76%)
Frame = -3
Query: 38 TTTTETTTTATTTETSTTETTT 59
+T+T++TTT +T TSTT T T
Sbjct: 1166 STSTKSTTTTPSTSTSTTRTLT 1101
>TC83571 similar to PIR|T10552|T10552 hypothetical protein T12G13.90 -
Arabidopsis thaliana, partial (19%)
Length = 767
Score = 38.5 bits (88), Expect = 0.006
Identities = 20/36 (55%), Positives = 21/36 (57%)
Frame = +1
Query: 35 APPTTTTETTTTATTTETSTTETTTTKTTTTPTTGE 70
+P TTT TTTT T E ETTTT TTT T E
Sbjct: 100 SPSITTTTTTTTTTDEEEEEMETTTTTTTTAIKTHE 207
Score = 35.4 bits (80), Expect = 0.048
Identities = 18/34 (52%), Positives = 20/34 (57%)
Frame = +1
Query: 32 LTKAPPTTTTETTTTATTTETSTTETTTTKTTTT 65
L + P+ TT TTTT TT E TTT TTTT
Sbjct: 88 LEQLSPSITTTTTTTTTTDEEEEEMETTTTTTTT 189
>AW694149 similar to GP|9279805|dbj AmiB {Dictyostelium discoideum}, partial
(1%)
Length = 359
Score = 38.1 bits (87), Expect = 0.007
Identities = 19/29 (65%), Positives = 21/29 (71%)
Frame = +2
Query: 38 TTTTETTTTATTTETSTTETTTTKTTTTP 66
TTTT TTTT+T TT TTTT TTT+P
Sbjct: 92 TTTTLTTTTSTKPSHLTTTTTTTLTTTSP 178
Score = 35.4 bits (80), Expect = 0.048
Identities = 18/35 (51%), Positives = 20/35 (56%)
Frame = +2
Query: 39 TTTETTTTATTTETSTTETTTTKTTTTPTTGEEDQ 73
TT TTT TTT T + TTT TTT TT + Q
Sbjct: 83 TTITTTTLTTTTSTKPSHLTTTTTTTLTTTSPQLQ 187
Score = 28.5 bits (62), Expect = 5.9
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 35 APPTTTTETTTTATTTETSTTETTTTKTTTTPT 67
+PP + T T + + TT TTTT TTTT T
Sbjct: 26 SPPLISWLLATMTTISLSFTTITTTTLTTTTST 124
>TC80046 similar to SP|P22699|GUN6_DICDI Endoglucanase precursor (EC
3.2.1.4) (Endo-1 4-beta-glucanase) (Spore germination
protein 270-6), partial (11%)
Length = 643
Score = 36.6 bits (83), Expect = 0.022
Identities = 20/38 (52%), Positives = 23/38 (59%), Gaps = 3/38 (7%)
Frame = +3
Query: 36 PPTTTTETTTTATTTETSTTET---TTTKTTTTPTTGE 70
PP+T T T TT +TETST T T T T TTP + E
Sbjct: 468 PPSTETSTETTPPSTETSTETTPPSTETSTETTPPSTE 581
Score = 36.6 bits (83), Expect = 0.022
Identities = 20/38 (52%), Positives = 23/38 (59%), Gaps = 3/38 (7%)
Frame = +3
Query: 36 PPTTTTETTTTATTTETSTTET---TTTKTTTTPTTGE 70
PP+T T T TT +TETST T T T T TTP + E
Sbjct: 501 PPSTETSTETTPPSTETSTETTPPSTETSTETTPPSTE 614
Score = 35.4 bits (80), Expect = 0.048
Identities = 19/34 (55%), Positives = 23/34 (66%), Gaps = 3/34 (8%)
Frame = +3
Query: 37 PTTTTETTTTATTTETST---TETTTTKTTTTPT 67
PT T+ T+T T TETST TET+T +T TPT
Sbjct: 273 PTETSTETSTETPTETSTETPTETSTETSTETPT 374
Score = 34.7 bits (78), Expect = 0.083
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 6/41 (14%)
Frame = +3
Query: 33 TKAPPTTTTET---TTTATTTETST---TETTTTKTTTTPT 67
T+ P T+TET T+T T+TET T TET T +T TPT
Sbjct: 300 TETPTETSTETPTETSTETSTETPTETSTETPTETSTETPT 422
Score = 33.9 bits (76), Expect = 0.14
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 36 PPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
PP+T T T TT +TETST T + T+T T
Sbjct: 534 PPSTETSTETTPPSTETSTETTPPSTETSTENT 632
Score = 32.7 bits (73), Expect = 0.31
Identities = 15/32 (46%), Positives = 20/32 (61%)
Frame = +3
Query: 37 PTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
PT T+ T+T T+TET T T+ TT P+T
Sbjct: 417 PTETSTETSTETSTETPPPSTETSTETTPPST 512
Score = 32.0 bits (71), Expect = 0.54
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 10/46 (21%)
Frame = +3
Query: 33 TKAPPTTTTETTT----------TATTTETSTTETTTTKTTTTPTT 68
T+ P T+TET+T T T+TET+ T T+ TT P+T
Sbjct: 408 TETPTETSTETSTETSTETPPPSTETSTETTPPSTETSTETTPPST 545
Score = 31.6 bits (70), Expect = 0.70
Identities = 20/42 (47%), Positives = 24/42 (56%), Gaps = 7/42 (16%)
Frame = +3
Query: 33 TKAPPTTTTETTT-------TATTTETSTTETTTTKTTTTPT 67
T P T T+T+T T T+TETST ET T +T TPT
Sbjct: 216 TTVSPITVTDTSTNTVSPSPTETSTETST-ETPTETSTETPT 338
Score = 31.2 bits (69), Expect = 0.91
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 33 TKAPPTTTTETTTTATTTETSTTETTTTKTTTTPTTGE 70
T+ T TET+ T T TETST +T T T T P + E
Sbjct: 372 TETSTETPTETS-TETPTETSTETSTETSTETPPPSTE 482
>TC88257 weakly similar to PIR|G96668|G96668 protein F1N19.7 [imported] -
Arabidopsis thaliana, partial (29%)
Length = 1283
Score = 36.2 bits (82), Expect = 0.028
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +1
Query: 37 PTTTTETTTTATTTETSTTETTTTKTTTTPTTG 69
PTT T +TT++T T TT TT TTTT T G
Sbjct: 283 PTTQTSCSTTSSTNTTITTVITTVATTTTST*G 381
>TC80581 similar to GP|19683021|gb|AAL92644.1 hypothetical protein
{Dictyostelium discoideum}, partial (5%)
Length = 850
Score = 36.2 bits (82), Expect = 0.028
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 33 TKAPPTTTTETTTTATTTETSTTETTTTKTTTTPTTGEED 72
T A TT TT+TA T +STT T TTT T+ D
Sbjct: 648 TSASAAATTTTTSTAAATTSSTTAAAATATTTNSTSAAAD 767
>TC85851 similar to PIR|T12180|T12180 probable transcription factor - fava
bean, partial (93%)
Length = 2007
Score = 35.4 bits (80), Expect = 0.048
Identities = 29/117 (24%), Positives = 55/117 (46%)
Frame = -2
Query: 40 TTETTTTATTTETSTTETTTTKTTTTPTTGEEDQL*ILGFVMSTTLMMIIRVLMRRKS*S 99
TTETTT+ TTT+++ T T+T T T ++ + F+ + R +RR+
Sbjct: 551 TTETTTSTTTTKSTVTSTSTKPTVTVTSSSTKSTTTASSFISGLPHSLSRRGWLRRQQSR 372
Query: 100 MMGVNVGITKITALWLIFPYFTERWE*KNSWTSRSMLIDFSRSWTSRQTSRLRWLQS 156
++ + AL+L + + R ++S + D R S T +++W++S
Sbjct: 371 LIRL--------ALFLDSTFLSSR---RSSSSFELFRNDELRRVLSVITKQIKWIRS 234
Score = 33.1 bits (74), Expect = 0.24
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -2
Query: 38 TTTTETTTTATTTETSTTETTTTKTTTTPTT 68
TTT+ TTT +T T TST T T +++T +T
Sbjct: 542 TTTSTTTTKSTVTSTSTKPTVTVTSSSTKST 450
>TC79934 similar to GP|20259633|gb|AAM14173.1 putative GAR1 protein
{Arabidopsis thaliana}, partial (87%)
Length = 814
Score = 35.0 bits (79), Expect = 0.063
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -2
Query: 35 APPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
A TTTT T T++ TT + +T T+T+++TTT T
Sbjct: 171 AESTTTTSTKTSSVTTTSESTITSTSESTTTAAT 70
Score = 33.9 bits (76), Expect = 0.14
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 38 TTTTETTTTATTTETSTTETTTTKTTTTPTTGE 70
+TTT T + TTT T T+ TTT +T +T E
Sbjct: 189 STTTSTAESTTTTSTKTSSVTTTSESTITSTSE 91
Score = 33.1 bits (74), Expect = 0.24
Identities = 16/36 (44%), Positives = 21/36 (57%)
Frame = -2
Query: 30 LKLTKAPPTTTTETTTTATTTETSTTETTTTKTTTT 65
LK +P TTTT T+ ++T T T TT +TTT
Sbjct: 660 LKSAPSPETTTTSTSRRTSSTPWGTPSTKTTTSTTT 553
Score = 32.7 bits (73), Expect = 0.31
Identities = 14/37 (37%), Positives = 26/37 (69%)
Frame = -2
Query: 32 LTKAPPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
+TK+ TTT+ +T TT+ +++ TTT+++T T T+
Sbjct: 204 ITKSTSTTTSTAESTTTTSTKTSSVTTTSESTITSTS 94
Score = 32.0 bits (71), Expect = 0.54
Identities = 15/32 (46%), Positives = 21/32 (64%)
Frame = -2
Query: 33 TKAPPTTTTETTTTATTTETSTTETTTTKTTT 64
T T T+ TTT+ +T TST+E+TTT T+
Sbjct: 162 TTTTSTKTSSVTTTSESTITSTSESTTTAATS 67
Score = 30.4 bits (67), Expect = 1.6
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = -2
Query: 43 TTTTATTTETS-TTETTTTKTTTTPTTGE 70
T +T+TTT T+ +T TT+TKT++ TT E
Sbjct: 201 TKSTSTTTSTAESTTTTSTKTSSVTTTSE 115
Score = 30.0 bits (66), Expect = 2.0
Identities = 26/69 (37%), Positives = 36/69 (51%), Gaps = 1/69 (1%)
Frame = -2
Query: 30 LKLTKAPPTTTTETTTTATTTETSTTETTTTKT-TTTPTTGEEDQL*ILGFVMSTTLMMI 88
+ L AP + ETTTT+T+ TS+T T T TTT TT + STT +
Sbjct: 666 ISLKSAP---SPETTTTSTSRRTSSTPWGTPSTKTTTSTTTASAKTTTSTASTSTT*CLS 496
Query: 89 IRVLMRRKS 97
+R +R+KS
Sbjct: 495 LR--LRKKS 475
>BG644345 weakly similar to GP|19697333|gb putative protein potential
transcriptional repressor Not4hp - Mus musculus, partial
(7%)
Length = 635
Score = 35.0 bits (79), Expect = 0.063
Identities = 17/31 (54%), Positives = 20/31 (63%)
Frame = +3
Query: 38 TTTTETTTTATTTETSTTETTTTKTTTTPTT 68
T TT TTT+ATTT T++ TT TT TT
Sbjct: 348 TATTTTTTSATTTTTTSATTTIAIAATTTTT 440
Score = 34.7 bits (78), Expect = 0.083
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +3
Query: 35 APPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
A TTTT TTT TT+ T+T T TTT T
Sbjct: 351 ATTTTTTSATTTTTTSATTTIAIAATTTTTAAAT 452
Score = 34.7 bits (78), Expect = 0.083
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 33 TKAPPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
T T T TTTT+ TT T+T+ TTT T TT
Sbjct: 330 TSISAATATTTTTTSATTTTTTSATTTIAIAATTTT 437
Score = 34.3 bits (77), Expect = 0.11
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 38 TTTTETTTTATTTETSTTETTTTKTTTT 65
TT+ T TTT TS T TTTT TTT
Sbjct: 327 TTSISAATATTTTTTSATTTTTTSATTT 410
Score = 33.9 bits (76), Expect = 0.14
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 32 LTKAPPTTTTETTTTATTTETSTTETTTTKTTTT 65
++ A TTTT T+ T TTT ++TT TTTT
Sbjct: 336 ISAATATTTTTTSATTTTTTSATTTIAIAATTTT 437
Score = 33.5 bits (75), Expect = 0.18
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = +3
Query: 35 APPTTTTETTTTATTTETSTTETTTTKTTTTPT 67
A TTT TT+ TTT TS T T TTT T
Sbjct: 342 AATATTTTTTSATTTTTTSATTTIAIAATTTTT 440
Score = 33.5 bits (75), Expect = 0.18
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 35 APPTTTTETTTTATTTETSTTETTTTKTTTT 65
A TTT+ + TATTT T++ TTTT + TT
Sbjct: 315 ATATTTSISAATATTTTTTSATTTTTTSATT 407
Score = 32.3 bits (72), Expect = 0.41
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 35 APPTTTTETTTTATTTETSTTETTTTKTTT 64
A T+ + T T TTT ++TT TTT+ TTT
Sbjct: 321 ATTTSISAATATTTTTTSATTTTTTSATTT 410
Score = 31.6 bits (70), Expect = 0.70
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 44 TTTATTTETSTTETTTTKTTTTPTT 68
TTT+ + T+TT TTT+ TTTT T+
Sbjct: 324 TTTSISAATATTTTTTSATTTTTTS 398
Score = 30.8 bits (68), Expect = 1.2
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 33 TKAPPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
T TTT+ TTTT T+ T+ TT TT T+
Sbjct: 348 TATTTTTTSATTTTTTSATTTIAIAATTTTTAAATS 455
Score = 30.8 bits (68), Expect = 1.2
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 33 TKAPPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
T + TT TTT+ATTT TTTT T+ T
Sbjct: 357 TTTTTSATTTTTTSATTTIAIAATTTTTAAATSVIT 464
Score = 30.4 bits (67), Expect = 1.6
Identities = 15/35 (42%), Positives = 16/35 (44%)
Frame = +3
Query: 33 TKAPPTTTTETTTTATTTETSTTETTTTKTTTTPT 67
T A TTTT TTT T+TT T T T
Sbjct: 369 TSATTTTTTSATTTIAIAATTTTTAAATSVITAAT 473
Score = 29.3 bits (64), Expect = 3.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 43 TTTTATTTETSTTETTTTKTTTTPTT 68
T TT + + + T TTTT TTT TT
Sbjct: 318 TATTTSISAATATTTTTTSATTTTTT 395
Score = 28.1 bits (61), Expect = 7.7
Identities = 15/39 (38%), Positives = 18/39 (45%)
Frame = +3
Query: 46 TATTTETSTTETTTTKTTTTPTTGEEDQL*ILGFVMSTT 84
TATTT S TTT TT+ TT + +TT
Sbjct: 318 TATTTSISAATATTTTTTSATTTTTTSATTTIAIAATTT 434
>TC89480 similar to GP|20260684|gb|AAM13240.1 unknown protein {Arabidopsis
thaliana}, partial (43%)
Length = 1068
Score = 35.0 bits (79), Expect = 0.063
Identities = 17/30 (56%), Positives = 19/30 (62%)
Frame = +3
Query: 36 PPTTTTETTTTATTTETSTTETTTTKTTTT 65
P TTT T +TATTT S T T T TT+T
Sbjct: 240 PTTTTATTLSTATTTTYSATATATATTTST 329
Score = 32.7 bits (73), Expect = 0.31
Identities = 17/38 (44%), Positives = 21/38 (54%)
Frame = +3
Query: 37 PTTTTETTTTATTTETSTTETTTTKTTTTPTTGEEDQL 74
PTTTT TT +T T T+ + T T TTT T E +
Sbjct: 240 PTTTT-ATTLSTATTTTYSATATATATTTSTAAESSSI 350
Score = 29.3 bits (64), Expect = 3.5
Identities = 14/31 (45%), Positives = 18/31 (57%)
Frame = +3
Query: 38 TTTTETTTTATTTETSTTETTTTKTTTTPTT 68
TTT ++TT TT T + + TTTT TT
Sbjct: 171 TTTISSSTTTTTFSTISNNPISIPTTTTATT 263
Score = 28.1 bits (61), Expect = 7.7
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 9/40 (22%)
Frame = +3
Query: 38 TTTTETTTTATTTETS---------TTETTTTKTTTTPTT 68
TTTT +++T TTT ++ TT T TT +T T TT
Sbjct: 168 TTTTISSSTTTTTFSTISNNPISIPTTTTATTLSTATTTT 287
>BG586379 similar to PIR|T03442|T034 glycine-rich protein - rice, partial
(28%)
Length = 701
Score = 35.0 bits (79), Expect = 0.063
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -3
Query: 38 TTTTETTTTATTTETSTTETTTTKTTTTPTTG 69
+TTT TTTTAT + STT T T + TTG
Sbjct: 393 STTTTTTTTATISAVSTTTVTAATTASAITTG 298
Score = 31.6 bits (70), Expect = 0.70
Identities = 15/29 (51%), Positives = 19/29 (64%)
Frame = -3
Query: 39 TTTETTTTATTTETSTTETTTTKTTTTPT 67
T T T T+TTT T+TT T + +TTT T
Sbjct: 417 TVTATAITSTTTTTTTTATISAVSTTTVT 331
Score = 31.2 bits (69), Expect = 0.91
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -3
Query: 38 TTTTETTTTATTTETSTTETTTTKTTTT 65
T T TTTT TTT T + +TTT T T
Sbjct: 405 TAITSTTTTTTTTATISAVSTTTVTAAT 322
>CA859989 similar to GP|18308125|gb bromodomain-containing protein BRD4 long
variant {Mus musculus}, partial (1%)
Length = 375
Score = 34.7 bits (78), Expect = 0.083
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2
Query: 32 LTKAPPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
+T TTTT T T+ T +T TTTT TTTT T
Sbjct: 107 ITLPSTTTTTNTRTSEIWTACATLPTTTTTTTTTTVT 217
>TC81797 similar to GP|17065224|gb|AAL32766.1 Unknown protein {Arabidopsis
thaliana}, partial (17%)
Length = 758
Score = 34.3 bits (77), Expect = 0.11
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 38 TTTTETTTTATTTETSTTETTTTKTTTTPT 67
+ TT TTTT TTT T+ T TKT+ +P+
Sbjct: 397 SATTTTTTTTTTTTTAPTAAAATKTSLSPS 486
Score = 32.7 bits (73), Expect = 0.31
Identities = 15/32 (46%), Positives = 19/32 (58%)
Frame = +1
Query: 38 TTTTETTTTATTTETSTTETTTTKTTTTPTTG 69
TTTT TTTT TT T+ T T+ + + P G
Sbjct: 406 TTTTTTTTTTTTAPTAAAATKTSLSPSVPIIG 501
Score = 30.4 bits (67), Expect = 1.6
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 44 TTTATTTETSTTETTTTKTTTTPTT 68
+T+ATTT T+TT TTTT T T
Sbjct: 391 STSATTTTTTTTTTTTTAPTAAAAT 465
>CB065311 similar to PIR|C83375|C83 probable glycosyl hydrolase PA2160
[imported] - Pseudomonas aeruginosa (strain PAO1),
partial (26%)
Length = 567
Score = 34.3 bits (77), Expect = 0.11
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -3
Query: 33 TKAPPTTTTETTTTATTTETSTTETTTTKTTTTPTT 68
T +PPT + T + TT TST +TTT T T PTT
Sbjct: 556 TSSPPTMASPCATWSRTT-TSTMKTTTRTTRTAPTT 452
>BF521488 weakly similar to GP|18447433|gb RE28280p {Drosophila
melanogaster}, partial (84%)
Length = 470
Score = 34.3 bits (77), Expect = 0.11
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -2
Query: 43 TTTTATTTETSTTETTTTKTTTTPTTGE 70
TT A TTE +TTE+TTT++T TT E
Sbjct: 319 TTAAAATTERTTTESTTTESTIRTTTTE 236
Score = 32.3 bits (72), Expect = 0.41
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2
Query: 38 TTTTETTTTATTTETSTTETTTTKTTT 64
TT TT TTTE++TTE+T TTT
Sbjct: 319 TTAAAATTERTTTESTTTESTIRTTTT 239
Score = 31.2 bits (69), Expect = 0.91
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -2
Query: 31 KLTKAPPTTTTETTTTATTTETSTTETTTTKT 62
+ T A TT TTT +TTTE ST TTTT++
Sbjct: 325 RTTTAAAATTERTTTESTTTE-STIRTTTTES 233
Score = 31.2 bits (69), Expect = 0.91
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -2
Query: 38 TTTTETTTTATTTETSTTETTTTKTTTT 65
TTT TT TT STT +T +TTTT
Sbjct: 322 TTTAAAATTERTTTESTTTESTIRTTTT 239
Score = 30.4 bits (67), Expect = 1.6
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 10/40 (25%)
Frame = -2
Query: 39 TTTETTTTA----------TTTETSTTETTTTKTTTTPTT 68
T TET T++ TT +TTE TTT++TTT +T
Sbjct: 376 TATETATSSVSTSGS*SRTTTAAAATTERTTTESTTTEST 257
Score = 29.6 bits (65), Expect = 2.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 39 TTTETTTTATTTETSTTETTTTKTTTTPTTGEE 71
TTTE+TTT +T T+TTE+ T E
Sbjct: 289 TTTESTTTESTIRTTTTESAIRIVATAEARASE 191
Score = 28.9 bits (63), Expect = 4.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -2
Query: 41 TETTTTATTTETSTTETTTTKTTTTPTT 68
T T ATT T+T TTT T T TT
Sbjct: 322 TTTAAAATTERTTTESTTTESTIRTTTT 239
>TC79561 similar to GP|14194107|gb|AAK56248.1 At1g77260/T14N5_19
{Arabidopsis thaliana}, partial (33%)
Length = 1092
Score = 34.3 bits (77), Expect = 0.11
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 33 TKAPPTTTTETTTTATTTETSTTETTTTKTTTTPT 67
++ PTTTT TTT T+T +ST T TT TPT
Sbjct: 136 SRRSPTTTT--TTTTTSTSSSTNSKTLPYTTLTPT 234
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.347 0.149 0.494
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,633,837
Number of Sequences: 36976
Number of extensions: 202959
Number of successful extensions: 4419
Number of sequences better than 10.0: 134
Number of HSP's better than 10.0 without gapping: 2164
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 557
Number of HSP's gapped (non-prelim): 3216
length of query: 478
length of database: 9,014,727
effective HSP length: 100
effective length of query: 378
effective length of database: 5,317,127
effective search space: 2009874006
effective search space used: 2009874006
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 14 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.8 bits)
S2: 60 (27.7 bits)
Medicago: description of AC123898.6