TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC123593.3 + phase: 0 /pseudo
         (176 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC78713 similar to GP|21310093|gb|AAM46142.1 terminal flower-lik...   179  5e-46
TC81061 similar to SP|Q9XFK7|MFT_ARATH MOTHER of FT and TF1 prot...   148  1e-36
TC89699 similar to GP|20258985|gb|AAM14208.1 putative phosphatid...    31  0.22
TC86851 similar to SP|Q9ZNT3|ADF5_ARATH Actin-depolymerizing fac...    27  4.2
CB892163 similar to GP|6045135|dbj oxidosqualene cyclase {Luffa ...    27  4.2
TC92103                                                                27  5.5
TC86850 similar to SP|Q9ZNT3|ADF5_ARATH Actin-depolymerizing fac...    27  5.5
TC92720                                                                27  5.5
TC80877 weakly similar to GP|5814093|gb|AAD52097.1| receptor-lik...    27  5.5
CA860240 similar to GP|10039641|gb| Orf122 {Chlorobium tepidum},...    26  7.2

>TC78713 similar to GP|21310093|gb|AAM46142.1 terminal flower-like protein 1
           {Vitis vinifera}, partial (95%)
          Length = 931

 Score =  179 bits (454), Expect = 5e-46
 Identities = 92/167 (55%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
 Frame = +1

Query: 9   PLAVGRVIGDVLDPFESTIPLLVTYGNRTVTNGGELKPSQVANQPQVIIGVNDPTALYTL 68
           PL VGRVIG+VLD F +++ + V+Y  + V NG E  PS +  +P+V I   D  + YTL
Sbjct: 82  PLIVGRVIGEVLDSFTTSMKMTVSYNKKQVFNGHEFFPSTINTKPKVEIDGGDMRSFYTL 261

Query: 69  VLVDPDAPSPSYPSFREYLHWMVTDIPATNAASFGNEVVSYEKPRPNLGIHRFVFVLLHQ 128
           V+ DPD P PS P  RE+LHW+VTDIP T  A+FG EVVSYE P+PN+GIHRFVFVL  Q
Sbjct: 262 VMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVVSYEIPKPNIGIHRFVFVLFKQ 441

Query: 129 QCRQRVYA-PGWRQNFNTREFIEFYNLGSPVAAVFFNCQRETGSGGR 174
           + R+ V A P  R  FNTR F    +LG PVAAV+FN QRET +  R
Sbjct: 442 KNRESVTASPSSRDYFNTRNFASQNDLGLPVAAVYFNAQRETAARRR 582


>TC81061 similar to SP|Q9XFK7|MFT_ARATH MOTHER of FT and TF1 protein.
           [Mouse-ear cress] {Arabidopsis thaliana}, complete
          Length = 846

 Score =  148 bits (374), Expect = 1e-36
 Identities = 79/162 (48%), Positives = 103/162 (62%), Gaps = 1/162 (0%)
 Frame = +1

Query: 8   NPLAVGRVIGDVLDPFESTIPLLVTYGNRTVTNGGELKPSQVANQPQVIIGVNDPTALYT 67
           +PL VGRVIGDV+D F  ++ + V +G + VTNG ++KPS   N P+V +  N    LYT
Sbjct: 109 DPLVVGRVIGDVVDMFIPSVGMSVYFGPKHVTNGCDIKPSMAINPPKVTLTGNMDN-LYT 285

Query: 68  LVLVDPDAPSPSYPSFREYLHWMVTDIPATNAASFGNEVVSYEKPRPNLGIHRFVFVLLH 127
           LV+ DPDAPSPS PS RE +HW+V DIP       G E++ Y  P+P +GIHR++ VL  
Sbjct: 286 LVMTDPDAPSPSEPSMRELIHWIVVDIPGGTNPKRGKEILPYIGPKPPVGIHRYILVLFE 465

Query: 128 QQCR-QRVYAPGWRQNFNTREFIEFYNLGSPVAAVFFNCQRE 168
           Q+     V  P  R +FNTR F    NLG PVA V+FN Q+E
Sbjct: 466 QKGPIGMVEQPTSRVSFNTRYFASQMNLGLPVATVYFNSQKE 591


>TC89699 similar to GP|20258985|gb|AAM14208.1 putative
           phosphatidylglycerotransferase {Arabidopsis thaliana},
           partial (60%)
          Length = 1176

 Score = 31.2 bits (69), Expect = 0.22
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 64  ALYTLVLVDPDAPSPSYPSFREYLHWMVTDIPATNAASFG 103
           AL    L+ PD  +P   S+  YL W+V      ++A++G
Sbjct: 812 ALVAAALLQPDFGTPETQSYITYLSWLVASTTVASSAAYG 931


>TC86851 similar to SP|Q9ZNT3|ADF5_ARATH Actin-depolymerizing factor 5
           (ADF-5) (AtADF5). [Mouse-ear cress] {Arabidopsis
           thaliana}, complete
          Length = 936

 Score = 26.9 bits (58), Expect = 4.2
 Identities = 14/44 (31%), Positives = 22/44 (49%)
 Frame = -1

Query: 82  SFREYLHWMVTDIPATNAASFGNEVVSYEKPRPNLGIHRFVFVL 125
           S +E+LH  VT IP          V+ YEK +   G+   +F++
Sbjct: 192 SMKEFLHSSVTHIPVVAILKAIAIVI*YEKKKTQAGLTFLLFLI 61


>CB892163 similar to GP|6045135|dbj oxidosqualene cyclase {Luffa cylindrica},
           partial (13%)
          Length = 798

 Score = 26.9 bits (58), Expect = 4.2
 Identities = 15/67 (22%), Positives = 31/67 (45%), Gaps = 9/67 (13%)
 Frame = +1

Query: 95  PATNAASFGNEVVSYEKPRPNLGIHRFVFVL---------LHQQCRQRVYAPGWRQNFNT 145
           P ++  + G +V+++ K    +    ++F++         L+Q C+ RV    W+Q    
Sbjct: 598 PVSDCTAEGLKVINFTKTLIWIS*TNYIFLICLTIFRQPFLYQTCQLRVLEKQWKQKHYA 777

Query: 146 REFIEFY 152
            + I FY
Sbjct: 778 MQLI*FY 798


>TC92103 
          Length = 658

 Score = 26.6 bits (57), Expect = 5.5
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 9/42 (21%)
 Frame = +1

Query: 73  PDAPSPSYPSFREY---------LHWMVTDIPATNAASFGNE 105
           P  PSPS+PSF  +          H  ++ +P  ++  FG +
Sbjct: 88  PTTPSPSFPSFNRFPSLFPQLCIRHSRLSTLPHNDSGGFGGD 213


>TC86850 similar to SP|Q9ZNT3|ADF5_ARATH Actin-depolymerizing factor 5
           (ADF-5) (AtADF5). [Mouse-ear cress] {Arabidopsis
           thaliana}, complete
          Length = 803

 Score = 26.6 bits (57), Expect = 5.5
 Identities = 14/44 (31%), Positives = 22/44 (49%)
 Frame = -3

Query: 82  SFREYLHWMVTDIPATNAASFGNEVVSYEKPRPNLGIHRFVFVL 125
           S +E+LH  VT IP          V+ YEK +   G+   +F++
Sbjct: 153 SMKEFLHSSVTHIPVVAILKAIAIVI*YEKKKNQAGLTFLLFLI 22


>TC92720 
          Length = 808

 Score = 26.6 bits (57), Expect = 5.5
 Identities = 25/95 (26%), Positives = 42/95 (43%), Gaps = 1/95 (1%)
 Frame = +2

Query: 47  SQVANQPQVIIGVNDPTALYTLVLVDPDAPSPSYPSFREYLHWMVTDIPATNAASFGNEV 106
           S  A  P      +  T  +  +L   D+ SPS+ + R  LH  + +  +  A +   E 
Sbjct: 293 STTACHPS*TFQESGQTGKHEYILSSQDS-SPSHQAIRP-LH--LPESRSLRALALEREP 460

Query: 107 VSYEKPRPNLGIHRFV-FVLLHQQCRQRVYAPGWR 140
              E    ++   +++ F+  H   RQR+YA GWR
Sbjct: 461 FLQESQSYSIVSQQWISFL*THSSARQRLYALGWR 565


>TC80877 weakly similar to GP|5814093|gb|AAD52097.1| receptor-like kinase
           CHRK1 {Nicotiana tabacum}, partial (26%)
          Length = 1229

 Score = 26.6 bits (57), Expect = 5.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 30  LVTYGNRTVTNGGELKPSQVANQPQVIIGVN 60
           L +Y   TVTNG EL   Q+       IGVN
Sbjct: 188 LFSYNRVTVTNGSELNLMQIQGNQFF*IGVN 280


>CA860240 similar to GP|10039641|gb| Orf122 {Chlorobium tepidum}, partial
           (25%)
          Length = 375

 Score = 26.2 bits (56), Expect = 7.2
 Identities = 19/66 (28%), Positives = 30/66 (44%), Gaps = 4/66 (6%)
 Frame = -3

Query: 20  LDPFESTIPLLVTYGNRTVTNGGELKPSQVANQPQVII----GVNDPTALYTLVLVDPDA 75
           + P  +   LL   G RTV+   +    Q A+QP   +     +  PT+ Y L L   ++
Sbjct: 280 VSPIANNSSLLPPVGVRTVS---QFLRGQSASQPGYALLPW*AITSPTS*YNLSLSISES 110

Query: 76  PSPSYP 81
           P  S+P
Sbjct: 109 PKTSFP 92


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.139    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,659,386
Number of Sequences: 36976
Number of extensions: 83118
Number of successful extensions: 360
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of query: 176
length of database: 9,014,727
effective HSP length: 90
effective length of query: 86
effective length of database: 5,686,887
effective search space: 489072282
effective search space used: 489072282
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)