TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC123574.8 - phase: 0 /pseudo
         (621 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BE941240 weakly similar to GP|9965103|gb|A resistance protein LM...    29  4.7
TC84354 similar to PIR|T51496|T51496 hypothetical protein T21H19...    29  6.1

>BE941240 weakly similar to GP|9965103|gb|A resistance protein LM6 {Glycine
           max}, partial (11%)
          Length = 624

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 12/28 (42%), Positives = 14/28 (49%)
 Frame = +3

Query: 551 CRFCTENGTFLKSCLMCPKWQHALVPWC 578
           C+ C    T L +   CP W   LVPWC
Sbjct: 375 CQICQ---TLLLTGAYCPNWMINLVPWC 449


>TC84354 similar to PIR|T51496|T51496 hypothetical protein T21H19_180 -
           Arabidopsis thaliana, partial (18%)
          Length = 831

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 13/29 (44%), Positives = 18/29 (61%)
 Frame = -1

Query: 555 TENGTFLKSCLMCPKWQHALVPWCCPIVI 583
           T  G  L++ L+CPK    L+P  CPI+I
Sbjct: 597 TGRGLVLRNLLICPK---TLIPLICPIII 520


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.365    0.166    0.686 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,849,003
Number of Sequences: 36976
Number of extensions: 484072
Number of successful extensions: 8014
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2502
Number of HSP's successfully gapped in prelim test: 390
Number of HSP's that attempted gapping in prelim test: 5321
Number of HSP's gapped (non-prelim): 3297
length of query: 621
length of database: 9,014,727
effective HSP length: 102
effective length of query: 519
effective length of database: 5,243,175
effective search space: 2721207825
effective search space used: 2721207825
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.5 bits)
S2: 61 (28.1 bits)