TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC123570.3 + phase: 0 /pseudo
         (1023 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC93320                                                               490  e-138
AW257114                                                              194  1e-49
AL382150 similar to GP|22534308|gb agglutinin receptor {Streptoc...    33  0.56
TC88944 type IIB calcium ATPase [Medicago truncatula]                  32  1.2
TC76333 similar to SP|P49044|VPE_VICSA Vacuolar processing enzym...    32  1.2
TC89372 similar to GP|22324595|gb|AAM95623.1 anaphase promoting ...    29  8.1

>TC93320 
          Length = 1094

 Score =  490 bits (1261), Expect = e-138
 Identities = 269/364 (73%), Positives = 299/364 (81%), Gaps = 3/364 (0%)
 Frame = +3

Query: 631 LTFEKYDISLRDEGILLLFASVIIALRPKTHVPNIRGILHLFIITLLKGVVPVAQALGSM 690
           LT  KYDIS RDEGILLLFAS IIALRPKTH+PNIRG+LHLFIITLLKGVVPVAQALGSM
Sbjct: 3   LTSGKYDISPRDEGILLLFASXIIALRPKTHIPNIRGLLHLFIITLLKGVVPVAQALGSM 182

Query: 691 VNKLISKSNGAEKSDELTLEEALHIIFNTKICFSSDNMLQICDGSINRNEIVLTDVCLGM 750
           +NKL SKSNGA+KSDELTLEEAL IIFNTKI FSS+NMLQI +GS N ++IVLTD+CLG+
Sbjct: 183 LNKLTSKSNGAKKSDELTLEEALDIIFNTKIWFSSNNMLQIYNGSSNGSDIVLTDLCLGI 362

Query: 751 TNDRLLQTNAVCGLSWIGKGLLLRGHEKIKDITKILTECLISD-RNSSLPLIEGLDENNE 809
           TNDRLLQ+NA+CGLSWIGKGLLLRGHEKIKDIT I TECLISD R +S+PL+EG  EN E
Sbjct: 363 TNDRLLQSNAICGLSWIGKGLLLRGHEKIKDITMIFTECLISDRRKTSVPLVEGSLENTE 542

Query: 810 EHKGDHLARKCAADAFHVLMSDAEDCLNRKFHATMRPLYKQRFFSSMMPIFLQLISRSDS 869
           + K D LARKCA +AFHVLMSDAEDCLNRKFHAT+RPLYKQRFFSSMMPIFLQLISRSDS
Sbjct: 543 KQKCDPLARKCATEAFHVLMSDAEDCLNRKFHATVRPLYKQRFFSSMMPIFLQLISRSDS 722

Query: 870 SSSRYLLLRAFARVMSVTPLIVILNDAKELISVLLDCLSMLTEDIQDKDILYG-LLLVLS 928
             SR LLLRAFA VMS TPLIVILN+AK+LI VLLDCL MLTEDIQDKDILYG +   + 
Sbjct: 723 LLSRSLLLRAFAHVMSDTPLIVILNEAKKLIPVLLDCLFMLTEDIQDKDILYGSVASFIW 902

Query: 929 GMLTEKNESLLFKAIQIKNDVNG*FLFLPIL-QLVRESCIQCLVALSKLPHVRIYPLRTQ 987
           G    K +      + I + +    L   ++ +L        LVALS+LPHVRIYPLRTQ
Sbjct: 903 GC*QRKMDKKQSSRMHILSSMV*LSLSTTLIRRLFGRQLFNGLVALSELPHVRIYPLRTQ 1082

Query: 988 VLEA 991
           V  A
Sbjct: 1083VSAA 1094


>AW257114 
          Length = 360

 Score =  194 bits (493), Expect = 1e-49
 Identities = 100/120 (83%), Positives = 105/120 (87%)
 Frame = +1

Query: 250 FIINSIASYEMYDAVSVQEKKKLHVIGRILYIFAKTSIPSCNAVFQSLLLRMMDSLGFSV 309
           FI NSIASYEMYD +SVQEKKKLH IGRILYI AKTSIPSCNAVFQSL LRMMD LGFS 
Sbjct: 1   FITNSIASYEMYDTISVQEKKKLHAIGRILYISAKTSIPSCNAVFQSLFLRMMDKLGFSA 180

Query: 310 SNIDGLKNAGILASQSVNFGFLYLCIELLAGCRELVILSEEKPGTCFTILHSSSDFLFNS 369
           SNIDGL+N GILASQSVNFGFLYLCIELL+ CRELVILS+EK  T  TILHSSS  LFN+
Sbjct: 181 SNIDGLQNGGILASQSVNFGFLYLCIELLSXCRELVILSDEKRETYCTILHSSSAVLFNA 360


>AL382150 similar to GP|22534308|gb agglutinin receptor {Streptococcus
           agalactiae 2603V/R}, partial (0%)
          Length = 439

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 12/33 (36%), Positives = 24/33 (72%)
 Frame = -2

Query: 279 LYIFAKTSIPSCNAVFQSLLLRMMDSLGFSVSN 311
           +Y F  +SIP+CN++  S +L ++DS  F++++
Sbjct: 165 MYCFLSSSIPNCNSLLISSILALLDSTSFNLAS 67


>TC88944 type IIB calcium ATPase [Medicago truncatula]
          Length = 1883

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 12/52 (23%), Positives = 32/52 (61%)
 Frame = +3

Query: 251  IINSIASYEMYDAVSVQEKKKLHVIGRILYIFAKTSIPSCNAVFQSLLLRMM 302
            I NS    ++++ +S ++ ++++V   IL  +  T++ +C A+FQ +++  +
Sbjct: 1548 IFNSFVFCQVFNEISSRDMERINVFEGILKNYVFTAVLTCTAIFQIIIVEFL 1703


>TC76333 similar to SP|P49044|VPE_VICSA Vacuolar processing enzyme precursor
            (EC 3.4.22.-) (VPE) (Proteinase B). [Spring vetch  Tare],
            partial (91%)
          Length = 2253

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = -3

Query: 64   ERDPECLMPAFHIVESLARLYP--DPSGLFASFARDVFDLLEPYFPIQFT 111
            +RDP+C+   F +V   ++L    DP+GL  S +   F +    FPI FT
Sbjct: 1327 DRDPQCVSKVFTMVLRQSQLSTSGDPAGLTLSSSSVPFSMPNKSFPISFT 1178


>TC89372 similar to GP|22324595|gb|AAM95623.1 anaphase promoting
           complex/cyclosome subunit {Arabidopsis thaliana},
           partial (42%)
          Length = 953

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 14/30 (46%), Positives = 19/30 (62%), Gaps = 3/30 (10%)
 Frame = +2

Query: 30  LCFELLDCLLEHH---ADSVASLEEDLIFG 56
           LC+E L+CL+E+H    D  A+L   L FG
Sbjct: 614 LCYEALECLIENHMLTCDEEANLISSLQFG 703


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.326    0.141    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,082,831
Number of Sequences: 36976
Number of extensions: 502945
Number of successful extensions: 3012
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2198
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 775
Number of HSP's gapped (non-prelim): 2395
length of query: 1023
length of database: 9,014,727
effective HSP length: 106
effective length of query: 917
effective length of database: 5,095,271
effective search space: 4672363507
effective search space used: 4672363507
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)