BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122730.8 + phase: 0 /pseudo
(739 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC79804 weakly similar to GP|6175165|gb|AAF04891.1| Mutator-like... 92 6e-19
AL375902 similar to GP|9759134|dbj mutator-like transposase-like... 88 1e-17
BF646328 similar to PIR|F84533|F845 Mutator-like transposase [im... 52 9e-15
CB891859 similar to GP|6175165|gb| Mutator-like transposase {Ara... 78 1e-14
AL375901 similar to GP|9759134|dbj mutator-like transposase-like... 56 4e-08
TC87209 similar to GP|9663767|emb|CAC01237.1 RNA Binding Protein... 40 0.003
BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xy... 40 0.004
TC82323 similar to GP|7673677|gb|AAF66982.1| transposase {Zea ma... 40 0.004
TC91327 similar to GP|22597168|gb|AAN03471.1 unknown protein {Gl... 37 0.021
TC87542 weakly similar to GP|22136436|gb|AAM91296.1 putative pro... 37 0.027
TC86759 similar to GP|16930405|gb|AAL31888.1 At2g32080/F22D22.17... 36 0.061
TC93727 weakly similar to GP|12963432|gb|AAK11263.1 ribosomal pr... 36 0.061
TC77143 similar to GP|559557|gb|AAA51649.1|| arabinogalactan-pro... 35 0.10
TC77261 homologue to GP|8777330|dbj|BAA96920.1 26S proteasome AA... 35 0.10
TC82269 weakly similar to GP|14581464|gb|AAK31804.1 protocadheri... 35 0.14
TC80104 similar to GP|20197699|gb|AAD20910.3 putative LRR recept... 35 0.14
TC86144 weakly similar to GP|10727325|gb|AAF50995.2 CG15635 gene... 34 0.18
TC86336 similar to GP|14626761|gb|AAK71662.1 mature anther-speci... 34 0.18
TC78973 similar to PIR|D84745|D84745 plastid protein [imported] ... 34 0.18
TC85607 homologue to GP|437310|gb|AAA62850.1|| nodulin {Medicago... 34 0.18
>TC79804 weakly similar to GP|6175165|gb|AAF04891.1| Mutator-like transposase
{Arabidopsis thaliana}, partial (57%)
Length = 2129
Score = 92.4 bits (228), Expect = 6e-19
Identities = 68/280 (24%), Positives = 120/280 (42%)
Frame = +1
Query: 336 QGLLPALAELLPDADNRFCVRHLYNNFRKKYPGKKLKELMWRAAKATYTTAFDREMNEIK 395
+G++ A+ P + + FC+RHL N K++ +L L+W AA AT AF +M EI+
Sbjct: 976 KGIVDAIRRKFPRSSHAFCMRHLSENIGKEFKNSRLIHLLWSAAYATTINAFREKMAEIE 1155
Query: 396 KISEEAYNHLLQTPVKHWSKSKFSNGPLCDTLVNNMTEAFNSVIVVLRKKPIVTMLEDIR 455
++S A L W+ F G L +N+ E FN I+ ++ PI+ ++E I+
Sbjct: 1156 EVSPNASMWLQHFHPSQWALVYF-EGTRYGHLSSNI-EEFNKWILEAQELPIIQVIERIQ 1329
Query: 456 VYLMERWEKNRQKVANYADNILPNIRKKI*KRV*FYKQLGGQVCRQQL*TLN*Y*IYFLF 515
L ++ R K +++ + P+ ++
Sbjct: 1330 SKLKTEFDDRRLKSSSWCSVLTPSSERR-------------------------------- 1413
Query: 516 VLYPLV*HLYAWNVLVRRAIEYDYEIRHRSMNGDSYSINLLRKECSCRKWLLTGLPCCHA 575
+ + + VL +E++ R S +N+ CSCR W L G+PC HA
Sbjct: 1414 -MVEAINRASTYQVLKSDEVEFEVISADR-----SDIVNIGSHSCSCRDWQLYGIPCSHA 1575
Query: 576 ISCMKSQDIDVDQYVSDCFRKERYEICYSHIIYPVNGQSL 615
++ + S DV Y + CF Y + P++ ++L
Sbjct: 1576 VAALISSRKDVYAYTAKCFTVASYRDTVCRGVTPLSLENL 1695
Score = 53.1 bits (126), Expect = 4e-07
Identities = 32/85 (37%), Positives = 42/85 (48%), Gaps = 6/85 (7%)
Frame = +3
Query: 598 RYEICYSHIIYPVNGQSLWRRTE------YTDLQPPPIKRQPGRPKKNRRKDVDEKRDEQ 651
R + CY+ PV G+ WR E ++PP +R PGRP+K R D RD
Sbjct: 1656 RMQRCYT----PVPGKLEWRTDESALDNDIAVVRPPKFRRPPGRPEKKRICVEDHNRD-- 1817
Query: 652 QLKKAKYGMKCSRCKAEGHNKSTCK 676
K+ + CSRC GH K+TCK
Sbjct: 1818 -----KHTVHCSRCNQTGHYKTTCK 1877
>AL375902 similar to GP|9759134|dbj mutator-like transposase-like protein
{Arabidopsis thaliana}, partial (20%)
Length = 542
Score = 87.8 bits (216), Expect = 1e-17
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
Frame = +2
Query: 558 KECSCRKWLLTGLPCCHAISCMKSQDIDVDQYVSDCFRKERYEICYSHIIYPVNGQSLWR 617
+ECSCR+W L G PC HA + + S + + CF + Y + YS +IYP+ +S WR
Sbjct: 8 RECSCRRWQLYGYPCAHAAAALISCGHNAHMFAEPCFTVQSYRMAYSQMIYPIPDKSQWR 187
Query: 618 ------------RTEYTDLQPPPIKRQPGRPKKNRRKDVDEKRDEQQLKKAKYGMKCSRC 665
R + + PP I+R PGRPKK + + K+ K ++C RC
Sbjct: 188 EHGEGAEGGGGARVDIV-IHPPKIRRPPGRPKKKVLR-------VENFKRPKRVVQCGRC 343
Query: 666 KAEGHNKSTCKLP 678
GH++ C +P
Sbjct: 344 HMLGHSQKKCTMP 382
>BF646328 similar to PIR|F84533|F845 Mutator-like transposase [imported] -
Arabidopsis thaliana, partial (3%)
Length = 636
Score = 52.0 bits (123), Expect(2) = 9e-15
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = -1
Query: 538 DYEIRHRSMNGDS--YSINLLRKECSCRKWLLTGLPCCHAISCMKSQDIDVDQYVSDCFR 595
D E+ + +++ ++ Y +NL ++ C+CRKW LTG+PC H I C+ + + +VS +R
Sbjct: 456 DMEMNNFNVSNETNKYIVNLAQRTCACRKWNLTGIPCAHVIPCIWHNGLADENFVSSYYR 277
Score = 46.6 bits (109), Expect(2) = 9e-15
Identities = 23/54 (42%), Positives = 29/54 (53%)
Frame = -3
Query: 593 CFRKERYEICYSHIIYPVNGQSLWRRTEYTDLQPPPIKRQPGRPKKNRRKDVDE 646
C RK + YSHI+ P +G LW T + P +R GRPKK R+K DE
Sbjct: 199 CCRKSQCLATYSHIVLPSSGPKLWPVTNTEHINPLAKRRSAGRPKKLRKKANDE 38
>CB891859 similar to GP|6175165|gb| Mutator-like transposase {Arabidopsis
thaliana}, partial (27%)
Length = 625
Score = 78.2 bits (191), Expect = 1e-14
Identities = 44/149 (29%), Positives = 79/149 (52%)
Frame = +1
Query: 336 QGLLPALAELLPDADNRFCVRHLYNNFRKKYPGKKLKELMWRAAKATYTTAFDREMNEIK 395
QG++ + P A + FC+RHL ++FRK++ L L+W AA F+ ++ EI+
Sbjct: 58 QGIVDGVEANFPTAFHGFCMRHLSDSFRKEFNNTMLVNLLWEAANCLTIIEFEGKVMEIE 237
Query: 396 KISEEAYNHLLQTPVKHWSKSKFSNGPLCDTLVNNMTEAFNSVIVVLRKKPIVTMLEDIR 455
+IS++A + + P + W+ + F G L N+ EA NS I+ PI+ M+E IR
Sbjct: 238 EISQDAAYWIRRVPPRLWATAYF-EGHRFGHLTANIVEALNSWILEASGLPIIQMMECIR 414
Query: 456 VYLMERWEKNRQKVANYADNILPNIRKKI 484
LM + + R+ + ++P+ + +
Sbjct: 415 RQLMTWFNERRETSMQWTSILVPSAERSV 501
>AL375901 similar to GP|9759134|dbj mutator-like transposase-like protein
{Arabidopsis thaliana}, partial (27%)
Length = 493
Score = 56.2 bits (134), Expect = 4e-08
Identities = 32/138 (23%), Positives = 64/138 (46%)
Frame = +3
Query: 347 PDADNRFCVRHLYNNFRKKYPGKKLKELMWRAAKATYTTAFDREMNEIKKISEEAYNHLL 406
P A + FC+R++ NFR + KL + W A A F+ ++ E+ ++S++ +
Sbjct: 12 PSASHGFCLRYVSENFRDTFKNTKLVNIFWNAVYALTAAEFESKITEMIEVSQDVISWFQ 191
Query: 407 QTPVKHWSKSKFSNGPLCDTLVNNMTEAFNSVIVVLRKKPIVTMLEDIRVYLMERWEKNR 466
P W+ + F +G +TE + + + P+V M+E IR + + R
Sbjct: 192 HFPPFLWAVAYF-DGVRYGHFTLGVTELLYNWALECHELPVVQMMEYIRQQMTSWFNDRR 368
Query: 467 QKVANYADNILPNIRKKI 484
+ + ++P+ K+I
Sbjct: 369 EVGMEWTSILVPSAEKRI 422
>TC87209 similar to GP|9663767|emb|CAC01237.1 RNA Binding Protein 45
{Nicotiana plumbaginifolia}, partial (69%)
Length = 1504
Score = 40.0 bits (92), Expect = 0.003
Identities = 24/93 (25%), Positives = 36/93 (37%)
Frame = +3
Query: 633 PGRPKKNRRKDVDEKRDEQQLKKAKYGMKCSRCKAEGHNKSTCKLPPPPPQPEPGTQPPA 692
PG P N + ++ +Q ++ Y M + PP PQP+P TQPP
Sbjct: 57 PGMPPPNLAQQFHQQVQQQHQQQPPYMM----------------MHPPQPQPQPQTQPPQ 188
Query: 693 TQFPTSQPTSDHAPTTQVSATQASASQVSTTQF 725
P +QP A SA + + Q+
Sbjct: 189 MWAPNAQPPQQSAVPPPSSADEVKTLWIGDLQY 287
>BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xylostella
granulovirus}, partial (42%)
Length = 909
Score = 39.7 bits (91), Expect = 0.004
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 627 PPIKRQPGRPKKNRRKDVDEKRDEQQLKKAKYGMKCSRCKAEGHNKSTCKLPPPPPQPEP 686
PP QP PK+ K+ D + Q ++A K + K + + PPPPP P
Sbjct: 1 PPTTPQPPAPKRPP-KEKDTQARNPQPEEATKKQKRAPEKKKNPPRGQPPPPPPPPPQAP 177
Query: 687 GTQPPATQFP--TSQPTSDHAP 706
T+PP Q P + P H P
Sbjct: 178 PTKPPTRQTPKNNTPPPPPHTP 243
Score = 32.7 bits (73), Expect = 0.52
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Frame = +3
Query: 626 PPPIKRQPG---RPKKNRRKDVDEKRDEQQLKKAKYGMKCSRCKA----EGHNKSTCKLP 678
PPP K G RP R ++ R +QQ + A G + + EG K+ K P
Sbjct: 657 PPPKKTARGGEERPPAGARARREKTRGDQQ-EAAPAGRPRKKPRGAREREGKKKNPQKKP 833
Query: 679 PPPPQPEPGTQPPATQFP 696
P P Q P PP + P
Sbjct: 834 PKPQQQPPKNPPPTKKTP 887
Score = 32.3 bits (72), Expect = 0.68
Identities = 27/99 (27%), Positives = 34/99 (34%), Gaps = 14/99 (14%)
Frame = +2
Query: 625 QPPPIKRQPGRPKKNRRKDVDEKRDEQQLKKAKYGMKCSRCKAEGHNKSTCKLPPPPPQP 684
+PP + PKK K R + Q K K K + E + PP PPQP
Sbjct: 8 RPPNPQPPSDPPKKRTPKPETPNRKKPQ-KNKKEPPKKRKTPPEASHPPPRPRPPRPPQP 184
Query: 685 --------------EPGTQPPATQFPTSQPTSDHAPTTQ 709
P T PP P P + PTT+
Sbjct: 185 NHQHDKPQKTTHPHHPHTPPPTPHPPNPPPNHPNHPTTR 301
>TC82323 similar to GP|7673677|gb|AAF66982.1| transposase {Zea mays},
partial (2%)
Length = 1165
Score = 39.7 bits (91), Expect = 0.004
Identities = 15/35 (42%), Positives = 21/35 (59%)
Frame = +1
Query: 551 YSINLLRKECSCRKWLLTGLPCCHAISCMKSQDID 585
Y+ L +CSCR + G+PCCH MK +D+D
Sbjct: 4 YNAASLEFQCSCRLFESRGIPCCHVFFVMKEEDVD 108
>TC91327 similar to GP|22597168|gb|AAN03471.1 unknown protein {Glycine max},
partial (70%)
Length = 738
Score = 37.4 bits (85), Expect = 0.021
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Frame = +1
Query: 620 EYTDLQPPPIKRQPGRPKK-------------NRRKDVDEKRDEQQLKKAKYGMKCSRCK 666
E + PPP ++P +PK+ + K+ ++ ++ ++ K+ + + + K
Sbjct: 268 EIVEPPPPPKPKEPEKPKEPVKPKEPEKPKEPEKPKNPEKPKEPEKPKEPEKPKEPEKPK 447
Query: 667 AEGHNKSTCKLPPPPPQPEPGTQPPATQ---FPTSQPTSDHAP 706
K PPP P+PEP QP + P QP + AP
Sbjct: 448 EPEKPKEKPAPPPPEPKPEPPKQPEKPKEKPAPPPQPMPEPAP 576
Score = 30.0 bits (66), Expect = 3.4
Identities = 21/78 (26%), Positives = 29/78 (36%), Gaps = 4/78 (5%)
Frame = +1
Query: 627 PPIKRQPGRPKKNRRKDVDEKRDEQQLKKAKYGMKCSRCKAEGHNK----STCKLPPPPP 682
P ++P +PK+ + EK E + K K K E + PPP P
Sbjct: 379 PEKPKEPEKPKEPEKPKEPEKPKEPEKPKEKPAPPPPEPKPEPPKQPEKPKEKPAPPPQP 558
Query: 683 QPEPGTQPPATQFPTSQP 700
PEP P P + P
Sbjct: 559 MPEPAPYIPVCPPPMAVP 612
>TC87542 weakly similar to GP|22136436|gb|AAM91296.1 putative protein
{Arabidopsis thaliana}, partial (39%)
Length = 2234
Score = 37.0 bits (84), Expect = 0.027
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 679 PPPPQPEPGTQPPATQFPTSQPTSDHAPTTQVSATQ 714
PPPP P P T QP+SD AP VSAT+
Sbjct: 404 PPPPPPPPHIPDSLVSTVTQQPSSDVAPAVSVSATE 511
>TC86759 similar to GP|16930405|gb|AAL31888.1 At2g32080/F22D22.17
{Arabidopsis thaliana}, partial (94%)
Length = 1467
Score = 35.8 bits (81), Expect = 0.061
Identities = 15/43 (34%), Positives = 22/43 (50%)
Frame = -1
Query: 655 KAKYGMKCSRCKAEGHNKSTCKLPPPPPQPEPGTQPPATQFPT 697
++K CS CK + ++ PPPPP P PP +FP+
Sbjct: 354 RSK*NSLCSTCKVLQRSSTSAPPPPPPPLLPPPPPPPPPEFPS 226
>TC93727 weakly similar to GP|12963432|gb|AAK11263.1 ribosomal protein P2
{Podospora anserina}, partial (77%)
Length = 442
Score = 35.8 bits (81), Expect = 0.061
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = -3
Query: 626 PPPIKRQPGRPKKNRRKDVDEKRDEQQLKKAKYGMKCSRCKAEGHNKSTCKLPPPPPQPE 685
PPP QP R ++ RR ++R EQQ ++ ++ S C + C PP E
Sbjct: 320 PPPWASQPWRGRQRRRGHHRQRRREQQRRQRRHPSSASPCPEQPAR*RPC--PPARKSAE 147
Query: 686 PG 687
PG
Sbjct: 146 PG 141
>TC77143 similar to GP|559557|gb|AAA51649.1|| arabinogalactan-protein {Pyrus
communis}, partial (30%)
Length = 956
Score = 35.0 bits (79), Expect = 0.10
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 678 PPPPPQPEPGTQPPATQFPTSQPTSDHAPTTQVSATQASA 717
PPP P P T PAT P PTSD APT +++ A
Sbjct: 294 PPPAAAPTPATPAPATSPPAPTPTSD-APTPDSTSSSPPA 410
Score = 29.3 bits (64), Expect = 5.7
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = +3
Query: 659 GMKCSRCKAEGHNKSTCKLP---PPPPQPEPGTQPPATQFPTSQPTSDHAP--TTQVSAT 713
G+ + C A+ + + P P PP P P PP PT+ P + P AT
Sbjct: 147 GLLATSCFAQAPGAAPTQPPSATPTPPTPAPVATPPTATPPTATPPTATPPPAAAPTPAT 326
Query: 714 QASAS 718
A A+
Sbjct: 327 PAPAT 341
>TC77261 homologue to GP|8777330|dbj|BAA96920.1 26S proteasome AAA-ATPase
subunit RPT3 {Arabidopsis thaliana}, partial (94%)
Length = 1575
Score = 35.0 bits (79), Expect = 0.10
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 678 PPPPPQPEPGTQPPATQFPTSQPT--SDHAPTTQVSATQASASQVSTTQFVAAKVSSGT 734
PPPPP P P PP T P+S P+ + ++ T + S ++ + + + FV K S+G+
Sbjct: 156 PPPPPTPIP-PPPPTTSTPSSNPSNANSNSSTYKKSMSKMNKRISNASFFVLRKKSNGS 329
>TC82269 weakly similar to GP|14581464|gb|AAK31804.1 protocadherin 15 {Homo
sapiens}, partial (1%)
Length = 728
Score = 34.7 bits (78), Expect = 0.14
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 679 PPPPQPEPGTQPPATQFPTSQPTSDHAPT-TQVSATQASASQVSTTQFVAAKVSSGT 734
PP P P P PP ++ T P H+P + S+T A+ SQ + T + K S+ T
Sbjct: 212 PPSPPPTPPNPPPPSKMKTLNPV--HSPKWSNNSSTNATISQTTDTHHKSTKSSTKT 376
>TC80104 similar to GP|20197699|gb|AAD20910.3 putative LRR receptor protein
kinase {Arabidopsis thaliana}, partial (28%)
Length = 1549
Score = 34.7 bits (78), Expect = 0.14
Identities = 19/58 (32%), Positives = 30/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 677 LPPPPPQPEPGTQPPA--TQFPTSQPTSDHAPTTQVSATQASASQVSTTQFVAAKVSS 732
+PPPPP P P PP+ T+ +PT+ H+ T+ + + S TT + + SS
Sbjct: 958 VPPPPPPPPPPPPPPSIPTKKGIVEPTTSHSLPTKRVIVEPTTSHRGTTVDPSLRSSS 1131
>TC86144 weakly similar to GP|10727325|gb|AAF50995.2 CG15635 gene product
{Drosophila melanogaster}, partial (4%)
Length = 922
Score = 34.3 bits (77), Expect = 0.18
Identities = 26/81 (32%), Positives = 29/81 (35%), Gaps = 7/81 (8%)
Frame = +3
Query: 665 CKAEGHNKSTCKLP-------PPPPQPEPGTQPPATQFPTSQPTSDHAPTTQVSATQASA 717
C +GH S KL P PP P P T P T P PTS PT + S
Sbjct: 414 CTIQGHCSSGQKLSVKVSASTPSPPSPTPPTSTPPTSTP---PTSGTTPTPPTNGGTPSP 584
Query: 718 SQVSTTQFVAAKVSSGTQSVA 738
S + S T VA
Sbjct: 585 SSPTGPDATPPSPGSATTLVA 647
>TC86336 similar to GP|14626761|gb|AAK71662.1 mature anther-specific protein
LAT61 {Lycopersicon esculentum}, partial (37%)
Length = 778
Score = 34.3 bits (77), Expect = 0.18
Identities = 28/101 (27%), Positives = 41/101 (39%), Gaps = 10/101 (9%)
Frame = +1
Query: 627 PPIKRQPGRPKKNRRKDVDEKRDEQQLKKAK----YGMKCSRCKAEGH------NKSTCK 676
PP Q GR R K E+R+E++L + Y +K S+ N S C
Sbjct: 163 PPGDYQHGR----REKTTKEEREEEELLLLRSIQVYELKGSKRPLPNEMGGTPTNMSACS 330
Query: 677 LPPPPPQPEPGTQPPATQFPTSQPTSDHAPTTQVSATQASA 717
P PQ P ++ FP+ P+ +PT T S+
Sbjct: 331 SMQPSPQSSSFPSPQSSSFPSPIPSYPTSPTRMDGITNPSS 453
>TC78973 similar to PIR|D84745|D84745 plastid protein [imported] -
Arabidopsis thaliana, partial (69%)
Length = 1583
Score = 34.3 bits (77), Expect = 0.18
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 670 HNKSTCKLPPPPPQPEPGTQPPATQFPTSQPTSDHAPTTQVSATQASASQ 719
H+ S PPPP P P PP PT P +H+P +S S+SQ
Sbjct: 673 HHPSNAAFSPPPPPPPP---PP---LPTPPP*PEHSPNLHLSHPLDSSSQ 804
>TC85607 homologue to GP|437310|gb|AAA62850.1|| nodulin {Medicago
truncatula}, partial (42%)
Length = 712
Score = 34.3 bits (77), Expect = 0.18
Identities = 16/38 (42%), Positives = 27/38 (70%)
Frame = +3
Query: 687 GTQPPATQFPTSQPTSDHAPTTQVSATQASASQVSTTQ 724
GT+PP+ + +Q TS APT+Q S+ +AS++Q ++ Q
Sbjct: 3 GTKPPS*ETTCTQATS*EAPTSQTSSREASSAQATS*Q 116
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.342 0.148 0.499
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,735,170
Number of Sequences: 36976
Number of extensions: 463951
Number of successful extensions: 10814
Number of sequences better than 10.0: 186
Number of HSP's better than 10.0 without gapping: 3788
Number of HSP's successfully gapped in prelim test: 342
Number of HSP's that attempted gapping in prelim test: 2091
Number of HSP's gapped (non-prelim): 7055
length of query: 739
length of database: 9,014,727
effective HSP length: 103
effective length of query: 636
effective length of database: 5,206,199
effective search space: 3311142564
effective search space used: 3311142564
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (22.0 bits)
S2: 62 (28.5 bits)
Medicago: description of AC122730.8