BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122722.4 + phase: 0
(307 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77992 similar to PIR|A96511|A96511 unknown protein [imported] ... 181 5e-53
TC88459 weakly similar to PIR|A96511|A96511 unknown protein [imp... 198 2e-51
TC90173 similar to GP|5295969|dbj|BAA81870.1 ESTD24835(R2634) co... 168 2e-42
BG644855 weakly similar to GP|5777621|emb CAA30379.1 protein {Or... 125 2e-29
CA916832 similar to PIR|A96511|A965 unknown protein [imported] -... 71 5e-13
AJ501098 homologue to GP|1871184|gb|A unknown protein {Arabidops... 55 4e-08
BE205419 48 4e-06
TC87566 weakly similar to GP|21554256|gb|AAM63331.1 unknown {Ara... 46 2e-05
AW686891 weakly similar to GP|10177234|db gb|AAF18257.1~gene_id:... 44 1e-04
TC89826 weakly similar to PIR|T49138|T49138 hypothetical protein... 42 4e-04
TC89445 similar to GP|7417006|gb|AAF62403.1| harpin inducing pro... 34 0.081
TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~un... 32 0.31
TC80245 similar to PIR|T48581|T48581 hypothetical protein T31B5.... 30 0.89
BQ150436 30 0.89
TC89233 homologue to GP|18734|emb|CAA36734.1|| DNA-directed RNA ... 30 1.2
BF639758 similar to GP|3668092|gb| unknown protein {Arabidopsis ... 30 1.2
BI270077 similar to GP|9758132|dbj| gene_id:MUD21.8~unknown prot... 28 3.4
TC93035 28 3.4
BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xy... 28 3.4
TC86589 similar to GP|7576200|emb|CAB87861.1 protein synthesis i... 28 3.4
>TC77992 similar to PIR|A96511|A96511 unknown protein [imported] -
Arabidopsis thaliana, partial (69%)
Length = 1395
Score = 181 bits (458), Expect(2) = 5e-53
Identities = 110/249 (44%), Positives = 147/249 (58%), Gaps = 8/249 (3%)
Frame = +1
Query: 1 MHIKTDSDVTSFDPSSP-RSQKQTPYYVQSPSRESSHDGDKS-----STMQPSPMDSPSH 54
MH KTDS+VTS D SS RS ++ YYVQSPS HDG+K+ ST SPM SP H
Sbjct: 67 MHTKTDSEVTSLDASSTTRSPRRPAYYVQSPS----HDGEKTTTSFHSTPVISPMGSPPH 234
Query: 55 QSYGHHSRASSSSRISGGYNSSFLGRKVNR--KVNDKGWIGSKVIEEENGGYGDFDGDGN 112
SSSSR SG RK+N + N K W VIEEE G + +
Sbjct: 235 SH-------SSSSRFSGS-------RKLNNNHRSNTKPWKEIDVIEEE--GLLNNQDHHH 366
Query: 113 GVSRRVQFFVAVVGFVLVFSLFCFIIWAASLHYKPQLSVKSLTVHNFYFGEGSDVTGVPT 172
+SRR F ++GF L+F+LF I+W AS KP + +KS+ + GSD TGV T
Sbjct: 367 SLSRRWYFLAFILGFFLLFTLFSLILWGASRPMKPHVMIKSIKFEHVRVQAGSDATGVAT 546
Query: 173 KMLTVNCSMRMLVHNPATFFGIYVSSKSVNLMYSDLTVATGELKKYHQQRKSRRTVSVNI 232
M+TVN +++ N TFFG++VSS ++L YS++ + TG +KK++Q R+S+R VSV +
Sbjct: 547 DMITVNATVKFTYRNKGTFFGVHVSSTPLDLSYSEIVIGTGNMKKFYQSRRSQRLVSVAV 726
Query: 233 QGSKVPLYG 241
GSK+PLYG
Sbjct: 727 MGSKIPLYG 753
Score = 44.7 bits (104), Expect(2) = 5e-53
Identities = 24/67 (35%), Positives = 39/67 (57%), Gaps = 1/67 (1%)
Frame = +2
Query: 241 GAGADVASSVDNGKISLTLVFEVKSRGNVVGKLVRTKHTQRVSCSIAVDPHN-NKYIKLK 299
GA + + + L L FE++SR V+GKLV+ K+ ++V CS+ DP N + LK
Sbjct: 758 GASLSSTTGMPTLPVPLKLSFEIRSRAYVLGKLVKPKYYKKVHCSVVFDPKKINVSVSLK 937
Query: 300 ENECRYN 306
++ C Y+
Sbjct: 938 KS-CTYD 955
>TC88459 weakly similar to PIR|A96511|A96511 unknown protein [imported] -
Arabidopsis thaliana, partial (44%)
Length = 1487
Score = 198 bits (503), Expect = 2e-51
Identities = 121/315 (38%), Positives = 180/315 (56%), Gaps = 9/315 (2%)
Frame = +1
Query: 1 MHIKTDSDVTSFDPSSPRSQKQTP-----YYVQSPSRESSHDGDKSST--MQPSPMDSPS 53
MH KTDS+VT+ ++ S ++P YYVQSPS HDG+K+ T +P+ SP
Sbjct: 280 MHTKTDSEVTTTSVATSTSPTRSPPRRPLYYVQSPS----HDGEKTVTTSFHSTPVASPH 447
Query: 54 HQSYGHHSRASSSSRISGGYNSSFLGRKVNRKVNDKGWIGSKVIEEENGGYGDFDGDGNG 113
H S H AS + + VN W VIEEE G+ + + +G G
Sbjct: 448 HSSSSTHFSASKKDQ------------QHQHSVNP--WKHIDVIEEE--GFLEKERNG-G 576
Query: 114 VSRRVQFFVAVVGFVLVFSLFCFIIWAASLHYKPQLSVKSLTVHNFYFGEGSDVTGVPTK 173
SRR F VVGF ++FSLF I+W AS KP++ +KS+ + GSD TGV T
Sbjct: 577 YSRRCYFLAFVVGFFVLFSLFSLILWGASRPMKPKIVIKSIKFDHVTVQAGSDSTGVATD 756
Query: 174 MLTVNCSMRMLVHNPATFFGIYVSSKSVNLMYSDLTVATGELKKYHQQRKSRRTVSVNIQ 233
M+T+N +++ N TFFG++VS+ + L YSD+ +A+G +K++HQ R+S + VSV +
Sbjct: 757 MITMNSTLKFTYRNTGTFFGVHVSATPLELSYSDIVIASGNMKEFHQSRRSHKLVSVPVM 936
Query: 234 GSKVPLYGAGADVASS--VDNGKISLTLVFEVKSRGNVVGKLVRTKHTQRVSCSIAVDPH 291
GSKVP G+GA ++S+ + + L L F ++SR NV+G LV+ K+ +R+ CSI +DP
Sbjct: 937 GSKVP**GSGASLSSTTGMPTLPVPLNLNFVMRSRANVLGNLVKHKYYKRIQCSITLDPK 1116
Query: 292 NNKYIKLKENECRYN 306
+ +N C Y+
Sbjct: 1117KLGALVSLKNSCTYD 1161
>TC90173 similar to GP|5295969|dbj|BAA81870.1 ESTD24835(R2634) corresponds
to a region of the predicted gene.~Similar to
Arabidopsis thaliana, partial (33%)
Length = 867
Score = 168 bits (426), Expect = 2e-42
Identities = 99/176 (56%), Positives = 123/176 (69%), Gaps = 6/176 (3%)
Frame = +3
Query: 4 KTDSDVTSFDPSSP-RSQKQTPYYVQSPSRESSHDGDKSSTMQP-----SPMDSPSHQSY 57
K++SD+TS PSSP RS K+ YYVQSPSR+S HDGDKSS+MQ SPM+SPSH S+
Sbjct: 354 KSESDITSLAPSSPSRSPKRPVYYVQSPSRDS-HDGDKSSSMQATPISNSPMESPSHPSF 530
Query: 58 GHHSRASSSSRISGGYNSSFLGRKVNRKVNDKGWIGSKVIEEENGGYGDFDGDGNGVSRR 117
G HSR SS+SR SG + SS GRK +RK NDKGW VI EE G Y +F+ +RR
Sbjct: 531 GRHSRNSSASRFSGIFRSSS-GRKGSRKRNDKGWPECGVILEE-GSYREFED--MSFARR 698
Query: 118 VQFFVAVVGFVLVFSLFCFIIWAASLHYKPQLSVKSLTVHNFYFGEGSDVTGVPTK 173
Q +AV F++VF++F IIW AS +K +++VKSL VHN Y EG+D TGVPTK
Sbjct: 699 FQALIAVFTFLVVFTVFGLIIWGASRPFKAEVTVKSLAVHNLYVWEGTDHTGVPTK 866
>BG644855 weakly similar to GP|5777621|emb CAA30379.1 protein {Oryza sativa},
partial (12%)
Length = 716
Score = 125 bits (314), Expect = 2e-29
Identities = 63/158 (39%), Positives = 104/158 (64%), Gaps = 4/158 (2%)
Frame = -1
Query: 141 ASLHYKPQLSVKSLTVHNFYFGEGSDVTGVPTKMLTVNCSMRMLVHNPATFFGIYVSSKS 200
AS YKP++ +KS+ N G+D TGVPT ML++N ++R+L NPATFFG++V+S
Sbjct: 698 ASKSYKPRVILKSIVFENLNVQSGNDGTGVPTDMLSLNSTVRILYRNPATFFGVHVTSTP 519
Query: 201 VNLMYSDLTVATGELKKYHQQRKSRRTVSVNIQGSKVPLYGAGADVASS----VDNGKIS 256
+ L Y L +A+G++++++Q RKS+R ++V + G +VPLYG + + +S ++ +
Sbjct: 518 MQLSYYQLRLASGQIQEFYQSRKSQRKLAVVVHGYQVPLYGGVSVLGNSNTEHINTVALP 339
Query: 257 LTLVFEVKSRGNVVGKLVRTKHTQRVSCSIAVDPHNNK 294
+ L FEV+SR ++G+LV++ R+ CSI H NK
Sbjct: 338 MNLTFEVRSRAYILGRLVKSTFYHRIRCSITF--HGNK 231
>CA916832 similar to PIR|A96511|A965 unknown protein [imported] - Arabidopsis
thaliana, partial (13%)
Length = 442
Score = 71.2 bits (173), Expect = 5e-13
Identities = 53/129 (41%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Frame = +1
Query: 1 MHIKTDSDVTSFDPSSP---RSQKQTPYYVQSPSRESSHDGDK-SSTMQPSPMDSP---- 52
M KTDS+V+S SSP R + YYVQSPSR+SS+DG+K +++ SP+ SP
Sbjct: 58 MLAKTDSEVSSLTQSSPTRSRDGLRAVYYVQSPSRDSSNDGEKTTNSFNSSPLQSPLGSP 237
Query: 53 ----SHQSYGHHSRASSSSRISGGYNSSFLGRKVNRKVNDKGWIGSKVIEEENGGYGDFD 108
S+ S G HSR SSS+R S SS NRK N + W EE G D D
Sbjct: 238 PHSHSNSSLGPHSRESSSTRYSASRKSSQASHN-NRKGNWRPWKDQFNAIEEEGLLDDDD 414
Query: 109 GDGNGVSRR 117
G R
Sbjct: 415 DADRGFPMR 441
>AJ501098 homologue to GP|1871184|gb|A unknown protein {Arabidopsis
thaliana}, partial (15%)
Length = 625
Score = 54.7 bits (130), Expect = 4e-08
Identities = 45/125 (36%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Frame = +3
Query: 1 MHIKTDSDVT--SFDPSSPRSQKQTP----YYVQSPSRESSHDGDKSSTMQPSPMDSPSH 54
MH KTDS+ T S + SS + P YYVQSP S+HD +K S SP SP H
Sbjct: 252 MHRKTDSEETTNSMEQSSSTPNRSPPRRPLYYVQSP---SNHDVEKMS-YGSSPAGSPPH 419
Query: 55 QSYG-------HHSRASSSSRISGGYNSSFLGRKVNRKVNDKGWIGSKVIEEENGGYGDF 107
Q++ HHSR SS+SR S + + + N G G + EE+ G +
Sbjct: 420 QNFHYYLSSPIHHSRESSTSRYSASLKNPRISSSWKKLNNRNG--GDDLDEEDEDDEGVY 593
Query: 108 DGDGN 112
D N
Sbjct: 594 DSGRN 608
>BE205419
Length = 645
Score = 48.1 bits (113), Expect = 4e-06
Identities = 30/117 (25%), Positives = 60/117 (50%), Gaps = 2/117 (1%)
Frame = -2
Query: 180 SMRMLVHNPATFFGIYVSSKSVNLMYSDLTVA-TGELKKYHQQRKSRRTVSVNIQGSKVP 238
SM ++V N + FFG+++ +++ +S L A + L+ Y + + + + ++ P
Sbjct: 644 SMNLIVENKSRFFGLHIRPPKMDMKFSILPFAFSNGLELYAESGLTVFPLQLEVKNK--P 471
Query: 239 LYGAGADVASSVDNGK-ISLTLVFEVKSRGNVVGKLVRTKHTQRVSCSIAVDPHNNK 294
+YGAG + +D+G+ + + + + S VV LV+ K RV C + + NK
Sbjct: 470 MYGAGRSMEDMLDSGRGLPILIQVTLSSSFEVVPALVKPKFHHRVECIVVLKKTYNK 300
>TC87566 weakly similar to GP|21554256|gb|AAM63331.1 unknown {Arabidopsis
thaliana}, partial (44%)
Length = 1042
Score = 46.2 bits (108), Expect = 2e-05
Identities = 40/162 (24%), Positives = 69/162 (41%), Gaps = 3/162 (1%)
Frame = +3
Query: 147 PQLSVKSLTVHNFYFGEGSDVTGVPTKMLTVNCSMRMLVHNPATFFGI-YVSSKSVNLMY 205
P+ SV L V F + L V ++ + NP GI Y ++ Y
Sbjct: 417 PKYSVDELRVTQFDLSNNNS--------LAVTFNLTITARNPNKKIGIDYRGGSRISAWY 572
Query: 206 SDLTVATGELKKYHQQRKSRRTVSVNIQGSKVPLYGAGADVASSVDNGKISLTLVFEVKS 265
D + G L K++Q K+ +S+ + G G + + + + S+ L VK
Sbjct: 573 IDTKLCEGSLPKFYQGHKNVTVLSIPLTGQTQNATGLSSSLQQQFQS-EGSVPLKLNVKQ 749
Query: 266 RGNV-VGKLVRTKHTQRVSCSIAVDPHN-NKYIKLKENECRY 305
+ +GKL K RV C+I VD + N I+++ + C++
Sbjct: 750 PVRIKLGKLKLPKINFRVRCTIVVDSLSANNSIRIRSSSCKF 875
>AW686891 weakly similar to GP|10177234|db
gb|AAF18257.1~gene_id:MRN17.10~similar to unknown
protein {Arabidopsis thaliana}, partial (64%)
Length = 482
Score = 43.5 bits (101), Expect = 1e-04
Identities = 30/137 (21%), Positives = 56/137 (39%), Gaps = 1/137 (0%)
Frame = +3
Query: 122 VAVVGFVLVFSLFCFIIWAASLHYKPQLSVKSLTVHNFYFGEGSDVTGVPTKMLTVNCSM 181
+ ++ +++ L I W Q SV+ ++HNF + + L N
Sbjct: 96 IIILALIIIVGLAVLISWLVVRPKNLQYSVEDASIHNFNLTDANH--------LYANFDF 251
Query: 182 RMLVHNPATFFGIYVSSKSVNLMYSDLTVATGELKKYHQQRKSRRTVSVNIQGSKVPLY- 240
+ NP + +Y S V++ Y D T+AT ++ + Q K+ + + V LY
Sbjct: 252 TIRSKNPNSKVSLYYDSIEVSVRYEDQTLATNAVQPFFQPHKNVTRMHARLTAQTVALYD 431
Query: 241 GAGADVASSVDNGKISL 257
D+ +G I+L
Sbjct: 432 SVPKDLKLXRSSGDIAL 482
>TC89826 weakly similar to PIR|T49138|T49138 hypothetical protein T10D17.10
- Arabidopsis thaliana, partial (59%)
Length = 1130
Score = 41.6 bits (96), Expect = 4e-04
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 8/187 (4%)
Frame = +2
Query: 106 DFDGDGNGVSRRVQFFVAVVGFVLVFSLFCFIIWAASLHYKPQLSVKSLTVHNFYF---G 162
DF GD R + F A++ F+++ F+IW KP+ ++ TV F G
Sbjct: 101 DFHGDERRQLIR-RIFAAILSFIILILFVIFLIWIILRPTKPRFILQDATVFAFNLSSTG 277
Query: 163 EGSDVTGVPTKMLTVNCSMRMLVHNPATFFGIYVSSKSVNLMY--SDLTVATGELKKYHQ 220
E T +T+ + + NP + GIY Y +++AT EL + +Q
Sbjct: 278 ETPSSTTPTPNTITLTIQVTLSSFNPNSKIGIYYHKLDAYASYRGQQISLAT-ELPQTYQ 454
Query: 221 QRKSRRTVSVNIQGSKVPLYGAGADVASSVDNGKISLTLVFEVKSRGNV---VGKLVRTK 277
+ S + G+ VP+ ++ + + S ++ VK G V VG V +
Sbjct: 455 GHRDVAVWSPILYGAAVPV---SPYLSEILRQDQTSGGVLVNVKVNGRVKWKVGTWVSGR 625
Query: 278 HTQRVSC 284
+ V+C
Sbjct: 626 YHIDVNC 646
>TC89445 similar to GP|7417006|gb|AAF62403.1| harpin inducing protein
{Nicotiana tabacum}, partial (36%)
Length = 651
Score = 33.9 bits (76), Expect = 0.081
Identities = 22/101 (21%), Positives = 39/101 (37%)
Frame = +1
Query: 124 VVGFVLVFSLFCFIIWAASLHYKPQLSVKSLTVHNFYFGEGSDVTGVPTKMLTVNCSMRM 183
+ +++ + FI W + +V T+ F F E T L + ++ +
Sbjct: 241 ITTIIVIIVILGFIFWLIVRPNVVKFTVNDATLTQFNFNE--------TNTLHYDLALNV 396
Query: 184 LVHNPATFFGIYVSSKSVNLMYSDLTVATGELKKYHQQRKS 224
V NP GIY + Y D+ A L ++ Q K+
Sbjct: 397 TVRNPNRRVGIYYDTIETMAFYKDVQFANQTLGRFFQHHKN 519
>TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~unknown
protein {Arabidopsis thaliana}, partial (46%)
Length = 2077
Score = 32.0 bits (71), Expect = 0.31
Identities = 24/78 (30%), Positives = 36/78 (45%), Gaps = 3/78 (3%)
Frame = -2
Query: 12 FDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHSRASSSSRISG 71
F+P S K++ Y S SS SS+ S +SP+ S S +SS+S +S
Sbjct: 822 FEPFSFLPPKKSSYLTFPISSASSSSSSSSSSSSSSISNSPAFSSSSSSSLSSSASSLSS 643
Query: 72 GYN---SSFLGRKVNRKV 86
++ SSF VN +
Sbjct: 642 PFS*LSSSFSKYSVNSSI 589
>TC80245 similar to PIR|T48581|T48581 hypothetical protein T31B5.160 -
Arabidopsis thaliana, partial (60%)
Length = 895
Score = 30.4 bits (67), Expect = 0.89
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = +2
Query: 28 QSPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHSRASSSSRISGGYNSSFLGRKVNRKVN 87
+S SR S+ S + PSP SPSH+ HH R SR S + R K N
Sbjct: 68 RSLSRSPSYRRRHSRSRSPSP--SPSHRRSRHHRRRRHRSRSSSSLSPPPRSRTPTLKHN 241
Query: 88 DK 89
K
Sbjct: 242 KK 247
>BQ150436
Length = 767
Score = 30.4 bits (67), Expect = 0.89
Identities = 26/93 (27%), Positives = 45/93 (47%), Gaps = 11/93 (11%)
Frame = +2
Query: 107 FDGDGNGVSRRVQFF---VAVVGFVLVFSLFCF-------IIWAASLHYKPQLS-VKSLT 155
F GD +SR V F ++ + ++ VF L CF I+ +LH + L+ +
Sbjct: 179 FIGDMVSISRGVLFCCFSISYLSYISVFVLLCF*SICC*SIVVHFTLHERTILTQIYIRY 358
Query: 156 VHNFYFGEGSDVTGVPTKMLTVNCSMRMLVHNP 188
+H Y + + T V +L + CS+ +VH+P
Sbjct: 359 LHISY--DNDNRTRVVVLVLIIRCSLTSVVHDP 451
>TC89233 homologue to GP|18734|emb|CAA36734.1|| DNA-directed RNA
polymerase {Glycine max}, partial (21%)
Length = 648
Score = 30.0 bits (66), Expect = 1.2
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 11 SFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHSRASSSS 67
++ PSSPR +PY SP S+ S SP SPS +Y S +S +
Sbjct: 33 AYSPSSPRLSPSSPYSPTSP----SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT 191
>BF639758 similar to GP|3668092|gb| unknown protein {Arabidopsis thaliana},
partial (5%)
Length = 488
Score = 30.0 bits (66), Expect = 1.2
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 4 KTDSDVTSFDPSSPRSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGH--HS 61
K+ + +S P++ RS++ PSR + + G +++T SP+ S S +++GH S
Sbjct: 182 KSSNQDSSLSPTAARSREW-----DGPSRWADYLGTETNTA--SPLSSTSSRNFGHDGQS 340
Query: 62 RASSSSRISGGYNSSFL 78
+ S+ S+ G N ++
Sbjct: 341 QGSTPSQPHKGLNMQWV 391
>BI270077 similar to GP|9758132|dbj| gene_id:MUD21.8~unknown protein
{Arabidopsis thaliana}, partial (3%)
Length = 671
Score = 28.5 bits (62), Expect = 3.4
Identities = 19/62 (30%), Positives = 27/62 (42%)
Frame = +2
Query: 126 GFVLVFSLFCFIIWAASLHYKPQLSVKSLTVHNFYFGEGSDVTGVPTKMLTVNCSMRMLV 185
GF+LV SL CF+ W +S +S + + F SD V T + +L
Sbjct: 41 GFLLVASLICFVFWF--------ISPQSTVLDSLDFSHMSDGNLVHTTAMKDGGKTSLLD 196
Query: 186 HN 187
HN
Sbjct: 197 HN 202
>TC93035
Length = 766
Score = 28.5 bits (62), Expect = 3.4
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Frame = +1
Query: 5 TDSDVTSFDPSSPRSQKQTPYY--------------VQSPSRESSHDGDKSSTMQPSPMD 50
TDSD S PSS K +P+ V+SPSR SS G + + P +
Sbjct: 307 TDSDRPS*SPSSKSRSKSSPFMRSSVSTLFPITVMSVRSPSRTSSLSGSATKSNGPCSLG 486
Query: 51 SPSHQSYGHHSRASSSSRISGGYNSSFLG 79
+ + G R +S+ S G S G
Sbjct: 487 TTA----GREGRV*TSTGCSPGAVSMTCG 561
>BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xylostella
granulovirus}, partial (42%)
Length = 909
Score = 28.5 bits (62), Expect = 3.4
Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +3
Query: 13 DPSSPRSQKQTPYYVQ-SPSRESSHDGDKSSTMQPSPMDSPSHQSYGHHSRASSSSR 68
DP + R T Q SP+ G K P P P H GH ++ + R
Sbjct: 312 DPGTTRGTPPTADDAQTSPAHHPGEGGGKGGAPPPPPRPPPRHGRGGHQNQTREAKR 482
>TC86589 similar to GP|7576200|emb|CAB87861.1 protein synthesis initiation
factor-like {Arabidopsis thaliana}, partial (28%)
Length = 2539
Score = 28.5 bits (62), Expect = 3.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 5 TDSDVTSFDPSSPRSQKQTPYYVQSPSRESSHD 37
T SD TSF+P + + P SP++ S+H+
Sbjct: 1392 TSSDRTSFNPREDLTSRYVPNRFSSPNQTSAHE 1490
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.316 0.132 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,998,589
Number of Sequences: 36976
Number of extensions: 150452
Number of successful extensions: 1138
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of query: 307
length of database: 9,014,727
effective HSP length: 96
effective length of query: 211
effective length of database: 5,465,031
effective search space: 1153121541
effective search space used: 1153121541
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Medicago: description of AC122722.4