TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC121238.3 - phase: 0 /pseudo
         (423 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AJ501627 similar to PIR|F84448|F84 probable purple acid phosphat...    28  6.7
TC90588 similar to SP|P93648|LON2_MAIZE Lon protease homolog 2  ...    28  8.7

>AJ501627 similar to PIR|F84448|F84 probable purple acid phosphatase
           [imported] - Arabidopsis thaliana, partial (16%)
          Length = 567

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +1

Query: 94  SSRSIRVYHWTTNEVNKKR 112
           S+ S R++HW+ +E+N KR
Sbjct: 304 SNYSFRIFHWSQSEINPKR 360


>TC90588 similar to SP|P93648|LON2_MAIZE Lon protease homolog 2
           mitochondrial precursor (EC 3.4.21.-). [Maize] {Zea
           mays}, partial (34%)
          Length = 1540

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 12/32 (37%), Positives = 18/32 (55%)
 Frame = +3

Query: 96  RSIRVYHWTTNEVNKKRCFASAFKCTKTTHDR 127
           RSI  YHW+    N+++C  S+  C + T  R
Sbjct: 834 RSI-AYHWSIRRCNERKCSTSSHNC*RYTTGR 926


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.372    0.162    0.611 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,517,543
Number of Sequences: 36976
Number of extensions: 198769
Number of successful extensions: 2018
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 918
Number of HSP's gapped (non-prelim): 1189
length of query: 423
length of database: 9,014,727
effective HSP length: 99
effective length of query: 324
effective length of database: 5,354,103
effective search space: 1734729372
effective search space used: 1734729372
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.9 bits)
S2: 60 (27.7 bits)