BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121237.3 - phase: 1
(455 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC78631 similar to PIR|T05388|T05388 hypothetical protein F16G20... 639 0.0
TC86720 similar to PIR|T47941|T47941 hypothetical protein F2A19.... 619 e-177
TC77765 similar to PIR|T47941|T47941 hypothetical protein F2A19.... 442 e-124
TC87011 weakly similar to GP|22136814|gb|AAM91751.1 unknown prot... 385 e-107
TC79890 similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidop... 323 8e-89
TC89269 similar to PIR|T05614|T05614 hypothetical protein F9D16.... 303 1e-82
TC91368 similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidop... 241 5e-68
BE205506 similar to GP|19698861|gb unknown protein {Arabidopsis ... 223 9e-59
TC82168 weakly similar to GP|11762132|gb|AAG40344.1 AT3g62110 {A... 208 3e-54
TC84804 similar to PIR|T05614|T05614 hypothetical protein F9D16.... 206 1e-53
TC89800 similar to GP|22136814|gb|AAM91751.1 unknown protein {Ar... 203 1e-52
TC93245 similar to PIR|T05995|T05995 hypothetical protein F17M5.... 160 1e-39
BQ146796 similar to GP|22136514|gb unknown protein {Arabidopsis ... 100 4e-39
TC91378 similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidop... 156 2e-38
TC83538 similar to PIR|B86325|B86325 hypothetical protein AAF822... 127 9e-30
TC82461 similar to GP|14334802|gb|AAK59579.1 putative polygalact... 126 2e-29
BE319278 weakly similar to GP|14334802|gb| putative polygalactur... 93 2e-19
TC91675 similar to GP|6624205|dbj|BAA88472.1 polygalacturonase {... 92 4e-19
TC83380 weakly similar to GP|10176984|dbj|BAB10216. polygalactur... 88 6e-18
TC89869 similar to GP|14334802|gb|AAK59579.1 putative polygalact... 73 3e-13
>TC78631 similar to PIR|T05388|T05388 hypothetical protein F16G20.200 -
Arabidopsis thaliana, partial (82%)
Length = 1613
Score = 639 bits (1649), Expect = 0.0
Identities = 298/436 (68%), Positives = 360/436 (82%), Gaps = 4/436 (0%)
Frame = +3
Query: 20 FDYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTG 79
F+Y A++CR +SA +T+FG GDG TLNTKAF SAI +LSQY+++GG+QL VPPG+WLTG
Sbjct: 156 FEYCAVSCRAYSASVTEFGAAGDGNTLNTKAFQSAIDHLSQYSSNGGSQLYVPPGRWLTG 335
Query: 80 SFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVI 139
SFNLTSHFTLFL KDAVIL SQ ES+WP + LPSYGRGR+ GGR+SSLIFGTNL DV+
Sbjct: 336 SFNLTSHFTLFLHKDAVILGSQDESEWPVIDPLPSYGRGRDTQGGRYSSLIFGTNLTDVV 515
Query: 140 ITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYS 199
ITGNNGT+DGQG WW KF K +L TRPY+IEIMYSD IQISNLTLVNSPSW VHPVYS
Sbjct: 516 ITGNNGTLDGQGELWWQKFHKGKLTYTRPYLIEIMYSDNIQISNLTLVNSPSWNVHPVYS 695
Query: 200 SNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKP 259
SNII+ G+TILAPV+ PNTDGI+PDS TN IED YIVSGDDC+A+KSGWDEYGI G P
Sbjct: 696 SNIIVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 875
Query: 260 SQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKD 319
++ +++RRLTCISP SA++ALGSEMSGGIQDVR ED+ AIN+ES VRIK+AVGRG +VKD
Sbjct: 876 TKQLVIRRLTCISPTSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKD 1055
Query: 320 IFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGIS 379
I+V+ M + T+K+ FWMTG YG H DN +DPNA+P + INYRD+ A+NVT+A K+EGIS
Sbjct: 1056IYVRRMTMKTMKWAFWMTGDYGSHADNNYDPNAIPVVQNINYRDMVAENVTMAAKLEGIS 1235
Query: 380 NDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLKEKEIE----CPFPR 435
N PFTGIC+SNVTI ++ KKLPWNCT I+GV+S V P PC LL ++ +E C FP
Sbjct: 1236NAPFTGICISNVTIGLAKKAKKLPWNCTYIAGVSSGVTPAPCGLLPDQGVEKIGPCAFPE 1415
Query: 436 DKLPIENVQFKTCNFQ 451
D LPI++VQ +TC ++
Sbjct: 1416DNLPIDDVQVQTCTYR 1463
>TC86720 similar to PIR|T47941|T47941 hypothetical protein F2A19.90 -
Arabidopsis thaliana, partial (85%)
Length = 1719
Score = 619 bits (1595), Expect = e-177
Identities = 292/436 (66%), Positives = 352/436 (79%), Gaps = 4/436 (0%)
Frame = +2
Query: 19 NFDYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLT 78
+F Y INCR HSA LTDFGGVGDG T NTKAF SAI++LSQY + GG+QL VP GKWLT
Sbjct: 233 SFVYNGINCRAHSASLTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLT 412
Query: 79 GSFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDV 138
GSF+LTSHFTL+L +DAV+LASQ ++WP L LPSYGRGR+ P GRF SLIFGTNL DV
Sbjct: 413 GSFSLTSHFTLYLDRDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDV 592
Query: 139 IITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVY 198
I+TG NGTIDGQG+ WW +F +K+LK TRPY+IE+M+SD IQISNLTL+NSPSW VHPVY
Sbjct: 593 IVTGGNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVY 772
Query: 199 SSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGK 258
SSNIII G+TI+AP+ PNTDGI+PDS TN IED YIVSGDDC+A+KSGWDEYGIK G
Sbjct: 773 SSNIIIQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGW 952
Query: 259 PSQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVK 318
P++ +++RRLTCISP SA +ALGSEMSGGIQDVR ED+TAI TES VRIK+AVGRG +VK
Sbjct: 953 PTKQLVIRRLTCISPFSATIALGSEMSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVK 1132
Query: 319 DIFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGI 378
DI+VK ++T+K+ F MTG Y H D FDPNALP+I+ INYRDV A+NVTIA + +GI
Sbjct: 1133DIYVKRFTMHTMKWAFKMTGDYNSHADTHFDPNALPEIANINYRDVVAENVTIAARFQGI 1312
Query: 379 SNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLKEKEIE----CPFP 434
SNDPF GIC++NVT+ M+ KK W CTDI G+TS V P PC+LL ++ E C FP
Sbjct: 1313SNDPFKGICIANVTLGMAVKAKKRSWTCTDIEGMTSGVTPPPCDLLPDQGPEKIGACDFP 1492
Query: 435 RDKLPIENVQFKTCNF 450
+ LPI+N++ K C++
Sbjct: 1493AESLPIDNLELKKCSY 1540
>TC77765 similar to PIR|T47941|T47941 hypothetical protein F2A19.90 -
Arabidopsis thaliana, partial (61%)
Length = 1027
Score = 442 bits (1138), Expect = e-124
Identities = 211/304 (69%), Positives = 254/304 (83%)
Frame = +3
Query: 8 ECRIPSISKLNNFDYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGA 67
ECR I +F+Y A+NCR HS L DFGGVGDGKT NTKAF SAI++LSQ A++GG+
Sbjct: 117 ECRKGKIIS-TSFEYSALNCRAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGS 293
Query: 68 QLIVPPGKWLTGSFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFS 127
QL VP GKWLTGSF+L SHFTL+L KDAV+LASQ ++WP + LPSYGRGR+ GR +
Sbjct: 294 QLYVPAGKWLTGSFSLISHFTLYLHKDAVLLASQDINEWPVIKPLPSYGRGRDAAAGRHT 473
Query: 128 SLIFGTNLIDVIITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLV 187
SLIFGTNL DVI+TG+NGTIDGQGS WW +F K+LK TRPY+IE+M+SD IQISNLTL+
Sbjct: 474 SLIFGTNLTDVIVTGDNGTIDGQGSFWWQQFHNKKLKYTRPYLIELMFSDNIQISNLTLL 653
Query: 188 NSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKS 247
+SPSW +HPVYSSNIII G+TI+AP+ PNTDGI+PDS TN IED YIVSGDDC+A+KS
Sbjct: 654 DSPSWNIHPVYSSNIIIKGITIIAPIRSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKS 833
Query: 248 GWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRI 307
GWDEYGIK G P++ +++RRLTCISP SA +ALGSEMSGGIQDVR ED+TA++TES +RI
Sbjct: 834 GWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDITAVHTESXIRI 1013
Query: 308 KSAV 311
K+AV
Sbjct: 1014KTAV 1025
>TC87011 weakly similar to GP|22136814|gb|AAM91751.1 unknown protein
{Arabidopsis thaliana}, partial (79%)
Length = 1405
Score = 385 bits (988), Expect = e-107
Identities = 183/371 (49%), Positives = 250/371 (67%)
Frame = +3
Query: 23 PAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFN 82
P ++ R HS + +FG VGDGKTLNT AF +AI L +A+ GGAQL VPPG WLTGSFN
Sbjct: 285 PKLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGNWLTGSFN 464
Query: 83 LTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITG 142
LTSH TLFL+K AVI+ SQ S W + ALPSYGRG++ P GR+ SLI G L DV+ITG
Sbjct: 465 LTSHLTLFLEKGAVIIGSQDPSHWNIIEALPSYGRGKDVPDGRYKSLINGNQLEDVVITG 644
Query: 143 NNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNI 202
NNGTIDG G WWD ++ L +RP++ EI+ SD + +SNLT N+P++ +HP Y SN+
Sbjct: 645 NNGTIDGNGMVWWDSYKSHSLNHSRPHLGEIISSDFVVVSNLTFWNAPAYSIHPGYCSNV 824
Query: 203 IINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQN 262
I ++I P + P T GI PDSS NV IED ++ G D I++KSGWD+YGI G+PS+
Sbjct: 825 HIQNISISTPPESPYTAGIVPDSSNNVCIEDCFVSIGFDAISLKSGWDQYGINYGRPSEK 1004
Query: 263 IIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFV 322
+ +RR+ + + ++ G+EMSGGI V IE V N+ S + ++ GRG ++K+I +
Sbjct: 1005VHIRRVHLRAFTGSAISFGTEMSGGISKVLIEHVNIFNSNSGIEFRTTKGRGGYIKEIAL 1184
Query: 323 KGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDP 382
+++ + G+ G HPD+ FDP ALP + I +D+T KN+TIAG + GI P
Sbjct: 1185SHIEMENVHTAISAKGNSGSHPDDKFDPKALPLLDHITLKDITGKNITIAGSLSGIKESP 1364
Query: 383 FTGICVSNVTI 393
FT IC+SN+T+
Sbjct: 1365FTNICLSNITL 1397
>TC79890 similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidopsis
thaliana}, partial (55%)
Length = 1151
Score = 323 bits (828), Expect = 8e-89
Identities = 154/300 (51%), Positives = 209/300 (69%)
Frame = +3
Query: 128 SLIFGTNLIDVIITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLV 187
SLI+G NL DVIITGNNGTIDGQGS WW KF+ K L TRP+++E++ S ++ ISN T +
Sbjct: 9 SLIYGCNLTDVIITGNNGTIDGQGSIWWSKFRNKTLDHTRPHLVELINSTEVLISNATFL 188
Query: 188 NSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKS 247
NSP W +HPVY SN+ + +TI+ P PNTDGIDPDSS NV IED YI +GDD I+IKS
Sbjct: 189 NSPFWTIHPVYCSNVTVQNVTIIVPFGSPNTDGIDPDSSDNVCIEDCYISTGDDLISIKS 368
Query: 248 GWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRI 307
GWDEYGI G+PS NI + RLT SA +A+GSEMSGG+ +V ED+ +++SA+RI
Sbjct: 369 GWDEYGISFGRPSTNISIHRLTG-RTTSAGIAIGSEMSGGVSEVYAEDIYIFDSKSAIRI 545
Query: 308 KSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAK 367
K++ GRG +V+++++ M L + TG YG+HPD+ +D +ALP I I +V +
Sbjct: 546 KTSPGRGGYVRNVYISNMTLINVDIAIRFTGLYGEHPDDSYDRDALPVIERITVVNVIGE 725
Query: 368 NVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLKEK 427
N+ AG ++GI D F IC+SN+T+ +S K PWNC+D+ G + V P+ CE L E+
Sbjct: 726 NIKRAGLIQGIKGDNFVDICLSNITLNVS---KNNPWNCSDVKGYSELVSPESCEQLNER 896
>TC89269 similar to PIR|T05614|T05614 hypothetical protein F9D16.290 -
Arabidopsis thaliana, partial (60%)
Length = 923
Score = 303 bits (775), Expect = 1e-82
Identities = 149/259 (57%), Positives = 186/259 (71%)
Frame = +1
Query: 28 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 87
R + +TDFGGVGD KTLN+KAF +AI + GG L VPPG +LT SFNLTSH
Sbjct: 148 RADTISITDFGGVGDSKTLNSKAFRAAIYRIQHLRRRGGTLLYVPPGVYLTDSFNLTSHM 327
Query: 88 TLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTI 147
TL+L AVI A+Q +WP + LPSYGRGRE PGGR+ S I G + DVIITG NGTI
Sbjct: 328 TLYLAAGAVIKATQRLRNWPLIAPLPSYGRGRELPGGRYISFIHGDGVRDVIITGENGTI 507
Query: 148 DGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGL 207
DGQG WW+ ++++ L+ TRP ++E + S I ISN+ NSP W +HPVY SN+++ +
Sbjct: 508 DGQGDVWWNMWRQRTLQFTRPNLVEFLNSRNIIISNVIFKNSPFWNIHPVYCSNVVVRYV 687
Query: 208 TILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRR 267
TILAP D PNTDGIDPDSS+NV IED+YI +GDD +A+KSGWD YGI G+PS +I +RR
Sbjct: 688 TILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDAYGISYGRPSNDITIRR 867
Query: 268 LTCISPKSALVALGSEMSG 286
+T SP A +ALGSE SG
Sbjct: 868 ITGSSP-FAGIALGSETSG 921
>TC91368 similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidopsis
thaliana}, partial (44%)
Length = 824
Score = 241 bits (614), Expect(3) = 5e-68
Identities = 112/187 (59%), Positives = 139/187 (73%)
Frame = +1
Query: 28 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 87
R HS +T+FG VGDG TLNTKAF +AI L+ +++ GGA+L VP G+WLTGSF+L SH
Sbjct: 166 RPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHL 345
Query: 88 TLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTI 147
TL+L KDA+IL S DWP + LPSYGRGRE PGGR SLI+G NL DVIITGN G I
Sbjct: 346 TLWLDKDAIILGSTNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNEGII 525
Query: 148 DGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGL 207
DGQGS WW F+ K L TRP+++E+M S ++ ISNLT +NSP W +HPVY S + + +
Sbjct: 526 DGQGSIWWSMFRNKTLDYTRPHLVELMNSTRVLISNLTFLNSPFWTIHPVYCSQVTVQNV 705
Query: 208 TILAPVD 214
TILAP+D
Sbjct: 706 TILAPLD 726
Score = 31.6 bits (70), Expect(3) = 5e-68
Identities = 16/23 (69%), Positives = 18/23 (77%)
Frame = +2
Query: 225 SSTNVLIEDNYIVSGDDCIAIKS 247
SS +V IED YI +GDD IAIKS
Sbjct: 755 SSDDVCIEDWYISTGDDLIAIKS 823
Score = 25.0 bits (53), Expect(3) = 5e-68
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 216 PNTDGIDPD 224
PNTDGIDPD
Sbjct: 729 PNTDGIDPD 755
>BE205506 similar to GP|19698861|gb unknown protein {Arabidopsis thaliana},
partial (37%)
Length = 594
Score = 223 bits (569), Expect = 9e-59
Identities = 108/190 (56%), Positives = 143/190 (74%), Gaps = 1/190 (0%)
Frame = +3
Query: 108 QLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTIDGQGSTWWDKFQKKQLKITR 167
++P LPSYG G E+PG R+ SLI G NL DV+ITG+NGTI+GQG WW KF++K+L TR
Sbjct: 24 RMPPLPSYGYGMERPGPRYGSLIHGQNLKDVVITGHNGTINGQGQAWWKKFRQKRLNYTR 203
Query: 168 PYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGLTILAPV-DVPNTDGIDPDSS 226
+++IM+S I I+++TL +SP W +HP N+ I G+TILAPV + PNTDGIDPDS
Sbjct: 204 GPLLQIMWSSDIVITDITLRDSPFWTLHPYDCKNLTIKGVTILAPVFEAPNTDGIDPDSC 383
Query: 227 TNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEMSG 286
++LIED YI GDD IAIKSGWD+YGI G+PS NI++R L S SA +++GSEMSG
Sbjct: 384 EDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSAGISIGSEMSG 563
Query: 287 GIQDVRIEDV 296
GI +V +E++
Sbjct: 564 GISNVTVENL 593
>TC82168 weakly similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidopsis
thaliana}, partial (33%)
Length = 587
Score = 208 bits (530), Expect = 3e-54
Identities = 98/189 (51%), Positives = 134/189 (70%)
Frame = +3
Query: 166 TRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPDS 225
TR +++E+M S+ + +SNLT NSP W +HPVY SN++I G+TILAP++ PNTDGIDPDS
Sbjct: 18 TRGHLLELMNSENVLVSNLTFRNSPFWTIHPVYCSNVVIKGMTILAPLNAPNTDGIDPDS 197
Query: 226 STNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEMS 285
STNV IEDNYI SGDD +AIKSGWD+YGI V KPS NIIV R++ +P + V +GSEMS
Sbjct: 198 STNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIVSRVSRTTPTCSGVGIGSEMS 377
Query: 286 GGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHPD 345
GGI ++ IE++ N+ + VRIKS GRG ++K++ + + + +K + DHPD
Sbjct: 378 GGISNITIENLHVWNSAAGVRIKSDNGRGGYIKNVSISNIRMERVKIPIRFSRGSNDHPD 557
Query: 346 NGFDPNALP 354
+G P
Sbjct: 558 DGVGGGKFP 584
>TC84804 similar to PIR|T05614|T05614 hypothetical protein F9D16.290 -
Arabidopsis thaliana, partial (43%)
Length = 733
Score = 206 bits (525), Expect = 1e-53
Identities = 102/184 (55%), Positives = 127/184 (68%), Gaps = 1/184 (0%)
Frame = +2
Query: 28 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYAN-DGGAQLIVPPGKWLTGSFNLTSH 86
R + LTDFGGVGDG TLNTKAF AI ++ + +GG L VPPG +LT FNLTSH
Sbjct: 182 RTDNISLTDFGGVGDGHTLNTKAFREAIYRINHLSQREGGTTLYVPPGVYLTEPFNLTSH 361
Query: 87 FTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGT 146
TL L AVI A+Q S+WP + LPSYGRGRE+PGGR+ S I G L DV+ITG NGT
Sbjct: 362 MTLHLAAGAVIKATQDSSNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 541
Query: 147 IDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIING 206
IDGQG WW+ ++K+ L+ TRP ++E + S I ISN+ +SP W +HPVY SN++I
Sbjct: 542 IDGQGDVWWNMWRKRTLQFTRPNLVEFVNSKDIIISNVIFKDSPFWNIHPVYCSNVVIRF 721
Query: 207 LTIL 210
TIL
Sbjct: 722 ATIL 733
>TC89800 similar to GP|22136814|gb|AAM91751.1 unknown protein {Arabidopsis
thaliana}, partial (38%)
Length = 669
Score = 203 bits (516), Expect = 1e-52
Identities = 98/170 (57%), Positives = 120/170 (69%)
Frame = +2
Query: 23 PAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFN 82
P++ R HS + +FG VGDGKTLNT AF +AI L +A+ GGAQL VPPG WLT SFN
Sbjct: 155 PSLKPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFN 334
Query: 83 LTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITG 142
LTSH TLFL+K AVI+ SQ +W L LPSYGRG E PGGR+ SLI G L DV+ITG
Sbjct: 335 LTSHLTLFLEKGAVIIGSQDHYNWDVLDPLPSYGRGLEVPGGRYQSLINGYMLQDVVITG 514
Query: 143 NNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSW 192
NNGTIDG GSTWW+ F L +RP+ +E+ S + SNLT +N+P++
Sbjct: 515 NNGTIDGMGSTWWESFXSHSLNYSRPHXVELXASTDVXXSNLTFLNAPAY 664
>TC93245 similar to PIR|T05995|T05995 hypothetical protein F17M5.200 -
Arabidopsis thaliana, partial (21%)
Length = 778
Score = 160 bits (404), Expect = 1e-39
Identities = 77/147 (52%), Positives = 99/147 (66%)
Frame = +1
Query: 28 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 87
RK + DFGGVGDGKT NT++F AI + ++ GG+QL +P G WLTGSFNLTS F
Sbjct: 337 RKIIKSIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPNGTWLTGSFNLTSDF 516
Query: 88 TLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTI 147
TLFL AV+L SQ +WP + LPSYGRGRE+ GGR SLI + +V+ITG NGT+
Sbjct: 517 TLFLHHGAVVLGSQDIKEWPIIEPLPSYGRGRERLGGRHISLIHANGVRNVVITGENGTV 696
Query: 148 DGQGSTWWDKFQKKQLKITRPYMIEIM 174
DGQG WW+ + L T +++E+M
Sbjct: 697 DGQGXMWWELWWNXTLVHTXSHLLELM 777
>BQ146796 similar to GP|22136514|gb unknown protein {Arabidopsis thaliana},
partial (28%)
Length = 598
Score = 99.8 bits (247), Expect(2) = 4e-39
Identities = 47/76 (61%), Positives = 57/76 (74%)
Frame = +2
Query: 23 PAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFN 82
P ++ R HS + +FG VGDGKTLNT AF +AI L +A+ GGAQL VPPG WLTGSFN
Sbjct: 197 PKLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGNWLTGSFN 376
Query: 83 LTSHFTLFLQKDAVIL 98
LTSH TLFL+K ++ L
Sbjct: 377 LTSHLTLFLEKGSISL 424
Score = 80.1 bits (196), Expect(2) = 4e-39
Identities = 35/60 (58%), Positives = 42/60 (69%)
Frame = +3
Query: 104 SDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTIDGQGSTWWDKFQKKQL 163
S W + ALPSYGRG++ P GR+ SLI G L DV+ITGNNGTIDG G WWD ++ L
Sbjct: 417 SHWNIIEALPSYGRGKDVPDGRYKSLINGNQLEDVVITGNNGTIDGNGMGWWDSYKSHSL 596
>TC91378 similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidopsis
thaliana}, partial (23%)
Length = 1185
Score = 156 bits (394), Expect = 2e-38
Identities = 74/153 (48%), Positives = 105/153 (68%)
Frame = +3
Query: 275 SALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDLNTLKYVF 334
SA +A+GSEMSGG+ DVR ED+ ++ +A+RIK++ GRG +V++I+V M L +
Sbjct: 18 SAGIAIGSEMSGGVSDVRAEDIHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIAI 197
Query: 335 WMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGICVSNVTIE 394
TGSYGDHPD+ +DPNALP I I DV +N+T AG +EGI D F IC+SN+T+
Sbjct: 198 RFTGSYGDHPDDAYDPNALPVIEKITIEDVIGENITKAGLIEGIEGDNFVNICLSNITLN 377
Query: 395 MSAHKKKLPWNCTDISGVTSNVVPKPCELLKEK 427
+S++ PWNC++I G + V P+ CE LKE+
Sbjct: 378 VSSN---YPWNCSNIRGYSDMVFPEACEPLKER 467
>TC83538 similar to PIR|B86325|B86325 hypothetical protein AAF82228.1
[imported] - Arabidopsis thaliana, partial (17%)
Length = 608
Score = 127 bits (319), Expect = 9e-30
Identities = 62/89 (69%), Positives = 69/89 (76%)
Frame = +3
Query: 34 LTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQK 93
LTDFGGVGDG TLNTKAF A++ +S++ N GGAQL VPPG WLT FNLTS TLFL +
Sbjct: 342 LTDFGGVGDGVTLNTKAFERAVSVISKFRNQGGAQLNVPPGFWLTSPFNLTSRMTLFLAR 521
Query: 94 DAVILASQYESDWPQLPALPSYGRGREKP 122
DAVILA Q E WP +PALPSYG GRE P
Sbjct: 522 DAVILAVQDEKYWPLMPALPSYGYGREHP 608
>TC82461 similar to GP|14334802|gb|AAK59579.1 putative polygalacturonase
{Arabidopsis thaliana}, partial (10%)
Length = 783
Score = 126 bits (317), Expect = 2e-29
Identities = 56/157 (35%), Positives = 95/157 (59%)
Frame = +3
Query: 265 VRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKG 324
+RR+ + + +A GS+MSGGI +V +E V N++ + ++ GRG ++KDI +
Sbjct: 9 IRRVHLQASYGSTLAFGSDMSGGISNVFVEHVHLYNSKGGIEFRTIRGRGGYMKDIILSD 188
Query: 325 MDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFT 384
+++ + TG G HPD+ FDPNALP + ++D+ N+TIAG G+ PFT
Sbjct: 189 IEMKNIYRAISATGYCGSHPDDKFDPNALPLLDHFIFQDIIGTNITIAGSFAGLQESPFT 368
Query: 385 GICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPC 421
IC+SN+T+ ++ + W C+++SG + +V+P PC
Sbjct: 369 NICLSNITLSVN-YASSTSWECSNVSGFSDSVLPIPC 476
>BE319278 weakly similar to GP|14334802|gb| putative polygalacturonase
{Arabidopsis thaliana}, partial (20%)
Length = 359
Score = 93.2 bits (230), Expect = 2e-19
Identities = 42/97 (43%), Positives = 64/97 (65%)
Frame = +2
Query: 224 DSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSE 283
DSS NV IED ++ G D I++KSGWD+YGI G+PS+ + +RR+ + + ++ G+E
Sbjct: 53 DSSNNVCIEDCFVSIGFDAISLKSGWDQYGINYGRPSEKVHIRRVHLRAFTGSAISFGTE 232
Query: 284 MSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDI 320
MSGGI V IE V N+ S + ++ GRG ++K+I
Sbjct: 233 MSGGISKVLIEHVNIFNSNSGIEFRTTKGRGGYIKEI 343
>TC91675 similar to GP|6624205|dbj|BAA88472.1 polygalacturonase {Cucumis
sativus}, partial (65%)
Length = 1146
Score = 92.0 bits (227), Expect = 4e-19
Identities = 73/257 (28%), Positives = 122/257 (47%), Gaps = 6/257 (2%)
Frame = +1
Query: 144 NGTIDGQGSTWWDKFQKKQLKIT---RPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSS 200
+G IDG GS WW KK P + I S I++ LT+ N+
Sbjct: 67 SGVIDGSGSKWWAASCKKNKTNPCKGAPTALTIDTSSSIKVKGLTIQNNQQMHFTISRCD 246
Query: 201 NIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPS 260
++ I G+ + +P D PNTDGI STNV+++D I +GDDCI+I + S
Sbjct: 247 SVRILGVKVASPGDSPNTDGIHISESTNVIVQDCKIGTGDDCISIVNA-----------S 393
Query: 261 QNIIVRRLTCISPKS-ALVALGSEMSGGIQDVRIEDVTAI-NTESAVRIKSAVGRGAFVK 318
NI ++R+ C ++ +LG + S G+ I D + T + +RIK+ G +VK
Sbjct: 394 SNIKMKRIFCGPGHGISIGSLGKDNSTGVVTKVILDTAFLKGTTNGLRIKTWQGGAGYVK 573
Query: 319 DIFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVT-AKNVTIAGKVEG 377
+ + + + + + Y D P + + ++ +IS I Y++V+ N A K +
Sbjct: 574 GVRFQNVRVENVSNPILIDQFYCDSPTSCQNQSSALEISEIMYQNVSGTTNSAKAIKFDC 753
Query: 378 ISNDPFTGICVSNVTIE 394
P + + +SNV +E
Sbjct: 754 SDTVPCSNLVLSNVDLE 804
>TC83380 weakly similar to GP|10176984|dbj|BAB10216. polygalacturonase-like
protein {Arabidopsis thaliana}, partial (21%)
Length = 1220
Score = 88.2 bits (217), Expect = 6e-18
Identities = 99/393 (25%), Positives = 166/393 (42%), Gaps = 12/393 (3%)
Frame = +2
Query: 37 FGGVGDGKTLNTKAFNSAITNL--SQYANDGGAQLIVPPGKWL----TGSFNLTSHFTLF 90
+G GDG+T ++KAF A L +Y N L+VP G T +F+ +
Sbjct: 107 YGAKGDGRTDDSKAFVDAFKALCGGRYGNT----LVVPNGHSFFVRPTLNFSGPCYSKNI 274
Query: 91 LQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIF--GTNLIDVIITGNNGTID 148
K + + SDW GR SL++ N+ + + G+ G I+
Sbjct: 275 NIKIMGNILAPKRSDW-----------------GRECSLMWLHFFNISGLTLDGS-GVIN 400
Query: 149 GQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGLT 208
G G W + + P ++ D +QI+ LT +N P + + S +I I+ +
Sbjct: 401 GNGEGWESREKGIGGCPRIPTALQFDKCDGLQINGLTHINGPGAHIAVIDSQDITISHIH 580
Query: 209 ILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRL 268
I +P NTDGID + V I D I SGDDCIA+K G SQ + V +
Sbjct: 581 INSPKKSHNTDGIDLTRTIGVNIHDIQIESGDDCIAVKGG-----------SQFVNVSNV 727
Query: 269 TCISPKSALVALGSEMSGG----IQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKG 324
TC P +++GS G +Q +++ T +SAV+IK+ G + K I +
Sbjct: 728 TC-GPGHG-ISVGSLGGHGSEEFVQHFSVKNCTFNGADSAVKIKTWPGGKGYAKHIIFED 901
Query: 325 MDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFT 384
+ +N Y ++ Y P+ + KIS I + ++ + V +
Sbjct: 902 IIINQTNYPVFIDQHYMRTPEQ----HQAVKISNITFSNIYGTCIGEDAVVLDCAKIGCY 1069
Query: 385 GICVSNVTIEMSAHKKKLPWNCTDISGVTSNVV 417
I ++ + I KK C ++ G ++++
Sbjct: 1070NITLNQINITSINRKKPASVKCKNVHGTANDII 1168
>TC89869 similar to GP|14334802|gb|AAK59579.1 putative polygalacturonase
{Arabidopsis thaliana}, partial (4%)
Length = 900
Score = 72.8 bits (177), Expect = 3e-13
Identities = 30/71 (42%), Positives = 47/71 (65%)
Frame = +2
Query: 354 PKISGINYRDVTAKNVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVT 413
P + I +D+T KN+TIAG + GI PFT IC+SN+T+ ++ W C+++SG +
Sbjct: 185 PLLDHITLKDITGKNITIAGSLSGIEESPFTNICLSNITLSTNSVSSS-KWECSNVSGFS 361
Query: 414 SNVVPKPCELL 424
+V+PKPC+ L
Sbjct: 362 DSVLPKPCQEL 394
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,623,243
Number of Sequences: 36976
Number of extensions: 176934
Number of successful extensions: 914
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of query: 455
length of database: 9,014,727
effective HSP length: 99
effective length of query: 356
effective length of database: 5,354,103
effective search space: 1906060668
effective search space used: 1906060668
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Medicago: description of AC121237.3