BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121237.2 - phase: 0
(463 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC78631 similar to PIR|T05388|T05388 hypothetical protein F16G20... 661 0.0
TC86720 similar to PIR|T47941|T47941 hypothetical protein F2A19.... 638 0.0
TC77765 similar to PIR|T47941|T47941 hypothetical protein F2A19.... 464 e-131
TC87011 weakly similar to GP|22136814|gb|AAM91751.1 unknown prot... 390 e-109
TC79890 similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidop... 317 8e-87
TC89269 similar to PIR|T05614|T05614 hypothetical protein F9D16.... 291 5e-79
TC91368 similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidop... 240 5e-66
BE205506 similar to GP|19698861|gb unknown protein {Arabidopsis ... 209 1e-54
TC89800 similar to GP|22136814|gb|AAM91751.1 unknown protein {Ar... 201 6e-52
TC84804 similar to PIR|T05614|T05614 hypothetical protein F9D16.... 199 1e-51
TC82168 weakly similar to GP|11762132|gb|AAG40344.1 AT3g62110 {A... 198 4e-51
TC93245 similar to PIR|T05995|T05995 hypothetical protein F17M5.... 161 6e-40
BQ146796 similar to GP|22136514|gb unknown protein {Arabidopsis ... 100 2e-39
TC91378 similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidop... 155 4e-38
TC82461 similar to GP|14334802|gb|AAK59579.1 putative polygalact... 127 1e-29
TC83538 similar to PIR|B86325|B86325 hypothetical protein AAF822... 120 1e-27
BE319278 weakly similar to GP|14334802|gb| putative polygalactur... 92 6e-19
TC91675 similar to GP|6624205|dbj|BAA88472.1 polygalacturonase {... 91 9e-19
TC83380 weakly similar to GP|10176984|dbj|BAB10216. polygalactur... 88 6e-18
TC89869 similar to GP|14334802|gb|AAK59579.1 putative polygalact... 74 1e-13
>TC78631 similar to PIR|T05388|T05388 hypothetical protein F16G20.200 -
Arabidopsis thaliana, partial (82%)
Length = 1613
Score = 661 bits (1705), Expect = 0.0
Identities = 306/436 (70%), Positives = 369/436 (84%), Gaps = 4/436 (0%)
Frame = +3
Query: 28 FDYPAINCRKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTG 87
F+Y A++CR +SA +T+FGA GDG TLNTKAF +AI +LSQY+++GG+QL VPPG+WLTG
Sbjct: 156 FEYCAVSCRAYSASVTEFGAAGDGNTLNTKAFQSAIDHLSQYSSNGGSQLYVPPGRWLTG 335
Query: 88 SFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVI 147
SFNLTSHFTLFL KDAVILGSQDESEWP + LPSYGRGRD GR+SSLIFGTNLTDV+
Sbjct: 336 SFNLTSHFTLFLHKDAVILGSQDESEWPVIDPLPSYGRGRDTQGGRYSSLIFGTNLTDVV 515
Query: 148 ITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYS 207
ITG+NGT+DGQG WW KFHK +LT TRPY+IEIMYSD IQISNLTL+NSP+W VHP+YS
Sbjct: 516 ITGNNGTLDGQGELWWQKFHKGKLTYTRPYLIEIMYSDNIQISNLTLVNSPSWNVHPVYS 695
Query: 208 SNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMP 267
SNII+ G+TILAPV+SPNTDGINPDSCTN RIED +IVSGDDC+A+KSGWDEYGI GMP
Sbjct: 696 SNIIVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 875
Query: 268 SQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKD 327
++Q++IRRLTCISP SA++ALGSEMSGGIQDVR ED+ AIN+ES +RIK+AVGRG +VKD
Sbjct: 876 TKQLVIRRLTCISPTSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKD 1055
Query: 328 IFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGIS 387
I+V+ M + TMK+ FWMTG YG H DN +DPNA+P + INYRD+ A+NVT+A KLEGIS
Sbjct: 1056IYVRRMTMKTMKWAFWMTGDYGSHADNNYDPNAIPVVQNINYRDMVAENVTMAAKLEGIS 1235
Query: 388 NDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLQEKEIE----CPFPT 443
N PFTGIC+SNVTI ++ KKLPWNCT I+GV+S V P PC LL ++ +E C FP
Sbjct: 1236NAPFTGICISNVTIGLAKKAKKLPWNCTYIAGVSSGVTPAPCGLLPDQGVEKIGPCAFPE 1415
Query: 444 DKLAIENVQFKTCNFQ 459
D L I++VQ +TC ++
Sbjct: 1416DNLPIDDVQVQTCTYR 1463
>TC86720 similar to PIR|T47941|T47941 hypothetical protein F2A19.90 -
Arabidopsis thaliana, partial (85%)
Length = 1719
Score = 638 bits (1645), Expect = 0.0
Identities = 301/461 (65%), Positives = 367/461 (79%), Gaps = 4/461 (0%)
Frame = +2
Query: 2 IGVISVVLILGSLAECRVPSSIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLNTKAFNA 61
+ + V L+ E R + I +F Y INCR HSA LTDFG VGDG T NTKAF +
Sbjct: 161 LAIFVVTLVYPERVESR-KAKIVTTSFVYNGINCRAHSASLTDFGGVGDGNTSNTKAFQS 337
Query: 62 AITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLP 121
AI++LSQY + GG+QL VP GKWLTGSF+LTSHFTL+L +DAV+L SQD +EWP L LP
Sbjct: 338 AISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTLYLDRDAVLLASQDITEWPVLEPLP 517
Query: 122 SYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEI 181
SYGRGRDAPAGRF SLIFGTNLTDVI+TG NGTIDGQG++WW +FH+K+L TRPY+IE+
Sbjct: 518 SYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQFHRKKLKYTRPYLIEL 697
Query: 182 MYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIED 241
M+SD IQISNLTL+NSP+W VHP+YSSNIII G+TI+AP+ SPNTDGINPDSCTN +IED
Sbjct: 698 MFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGINPDSCTNTKIED 877
Query: 242 NFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRI 301
+IVSGDDC+A+KSGWDEYGIK G P++Q++IRRLTCISP SA +ALGSEMSGGIQDVR
Sbjct: 878 CYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSEMSGGIQDVRA 1057
Query: 302 EDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNAL 361
ED+TAI TES +RIK+AVGRG +VKDI+VK ++TMK+ F MTG Y H D FDPNAL
Sbjct: 1058EDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHADTHFDPNAL 1237
Query: 362 PKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVT 421
P+I+ INYRDV A+NVTIA + +GISNDPF GIC++NVT+ M+ KK W CTDI G+T
Sbjct: 1238PEIANINYRDVVAENVTIAARFQGISNDPFKGICIANVTLGMAVKAKKRSWTCTDIEGMT 1417
Query: 422 SNVVPKPCELLQEKEIE----CPFPTDKLAIENVQFKTCNF 458
S V P PC+LL ++ E C FP + L I+N++ K C++
Sbjct: 1418SGVTPPPCDLLPDQGPEKIGACDFPAESLPIDNLELKKCSY 1540
>TC77765 similar to PIR|T47941|T47941 hypothetical protein F2A19.90 -
Arabidopsis thaliana, partial (61%)
Length = 1027
Score = 464 bits (1193), Expect = e-131
Identities = 218/304 (71%), Positives = 261/304 (85%)
Frame = +3
Query: 16 ECRVPSSIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGA 75
ECR I +F+Y A+NCR HS L DFG VGDGKT NTKAF +AI++LSQ A++GG+
Sbjct: 117 ECRKGKIIS-TSFEYSALNCRAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGS 293
Query: 76 QLIVPPGKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFS 135
QL VP GKWLTGSF+L SHFTL+L KDAV+L SQD +EWP + LPSYGRGRDA AGR +
Sbjct: 294 QLYVPAGKWLTGSFSLISHFTLYLHKDAVLLASQDINEWPVIKPLPSYGRGRDAAAGRHT 473
Query: 136 SLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLI 195
SLIFGTNLTDVI+TGDNGTIDGQGS+WW +FH K+L TRPY+IE+M+SD IQISNLTL+
Sbjct: 474 SLIFGTNLTDVIVTGDNGTIDGQGSFWWQQFHNKKLKYTRPYLIELMFSDNIQISNLTLL 653
Query: 196 NSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKS 255
+SP+W +HP+YSSNIII G+TI+AP+ SPNTDGINPDSCTN +IED +IVSGDDC+A+KS
Sbjct: 654 DSPSWNIHPVYSSNIIIKGITIIAPIRSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKS 833
Query: 256 GWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRI 315
GWDEYGIK G P++Q++IRRLTCISP SA +ALGSEMSGGIQDVR ED+TA++TES IRI
Sbjct: 834 GWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDITAVHTESXIRI 1013
Query: 316 KSAV 319
K+AV
Sbjct: 1014KTAV 1025
>TC87011 weakly similar to GP|22136814|gb|AAM91751.1 unknown protein
{Arabidopsis thaliana}, partial (79%)
Length = 1405
Score = 390 bits (1003), Expect = e-109
Identities = 192/398 (48%), Positives = 262/398 (65%)
Frame = +3
Query: 4 VISVVLILGSLAECRVPSSIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLNTKAFNAAI 63
+++++L+L V +++ + P ++ R HS + +FGAVGDGKTLNT AF AI
Sbjct: 207 LVALLLLLALSNAVNVYGDVEICRLN-PKLDPRPHSVSILEFGAVGDGKTLNTIAFQNAI 383
Query: 64 TNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLPSY 123
L +A+ GGAQL VPPG WLTGSFNLTSH TLFL+K AVI+GSQD S W + LPSY
Sbjct: 384 FYLKSFADKGGAQLYVPPGNWLTGSFNLTSHLTLFLEKGAVIIGSQDPSHWNIIEALPSY 563
Query: 124 GRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMY 183
GRG+D P GR+ SLI G L DV+ITG+NGTIDG G WWD + L +RP++ EI+
Sbjct: 564 GRGKDVPDGRYKSLINGNQLEDVVITGNNGTIDGNGMVWWDSYKSHSLNHSRPHLGEIIS 743
Query: 184 SDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNF 243
SD + +SNLT N+P + +HP Y SN+ I ++I P +SP T GI PDS NV IED F
Sbjct: 744 SDFVVVSNLTFWNAPAYSIHPGYCSNVHIQNISISTPPESPYTAGIVPDSSNNVCIEDCF 923
Query: 244 IVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRIED 303
+ G D I++KSGWD+YGI G PS+++ IRR+ + + ++ G+EMSGGI V IE
Sbjct: 924 VSIGFDAISLKSGWDQYGINYGRPSEKVHIRRVHLRAFTGSAISFGTEMSGGISKVLIEH 1103
Query: 304 VTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNALPK 363
V N+ S I ++ GRG ++K+I + +++ + G+ G HPD+ FDP ALP
Sbjct: 1104VNIFNSNSGIEFRTTKGRGGYIKEIALSHIEMENVHTAISAKGNSGSHPDDKFDPKALPL 1283
Query: 364 ISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTI 401
+ I +D+T KN+TIAG L GI PFT IC+SN+T+
Sbjct: 1284LDHITLKDITGKNITIAGSLSGIKESPFTNICLSNITL 1397
>TC79890 similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidopsis
thaliana}, partial (55%)
Length = 1151
Score = 317 bits (811), Expect = 8e-87
Identities = 152/300 (50%), Positives = 207/300 (68%)
Frame = +3
Query: 136 SLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLI 195
SLI+G NLTDVIITG+NGTIDGQGS WW KF K L TRP+++E++ S ++ ISN T +
Sbjct: 9 SLIYGCNLTDVIITGNNGTIDGQGSIWWSKFRNKTLDHTRPHLVELINSTEVLISNATFL 188
Query: 196 NSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKS 255
NSP W +HP+Y SN+ + +TI+ P SPNTDGI+PDS NV IED +I +GDD I+IKS
Sbjct: 189 NSPFWTIHPVYCSNVTVQNVTIIVPFGSPNTDGIDPDSSDNVCIEDCYISTGDDLISIKS 368
Query: 256 GWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRI 315
GWDEYGI G PS I I RLT SA +A+GSEMSGG+ +V ED+ +++SAIRI
Sbjct: 369 GWDEYGISFGRPSTNISIHRLTG-RTTSAGIAIGSEMSGGVSEVYAEDIYIFDSKSAIRI 545
Query: 316 KSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAK 375
K++ GRG +V+++++ M L + TG YG+HPD+ +D +ALP I I +V +
Sbjct: 546 KTSPGRGGYVRNVYISNMTLINVDIAIRFTGLYGEHPDDSYDRDALPVIERITVVNVIGE 725
Query: 376 NVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLQEK 435
N+ AG ++GI D F IC+SN+T+ +S K PWNC+D+ G + V P+ CE L E+
Sbjct: 726 NIKRAGLIQGIKGDNFVDICLSNITLNVS---KNNPWNCSDVKGYSELVSPESCEQLNER 896
>TC89269 similar to PIR|T05614|T05614 hypothetical protein F9D16.290 -
Arabidopsis thaliana, partial (60%)
Length = 923
Score = 291 bits (744), Expect = 5e-79
Identities = 144/259 (55%), Positives = 179/259 (68%)
Frame = +1
Query: 36 RKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 95
R + +TDFG VGD KTLN+KAF AAI + GG L VPPG +LT SFNLTSH
Sbjct: 148 RADTISITDFGGVGDSKTLNSKAFRAAIYRIQHLRRRGGTLLYVPPGVYLTDSFNLTSHM 327
Query: 96 TLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTI 155
TL+L AVI +Q WP + LPSYGRGR+ P GR+ S I G + DVIITG+NGTI
Sbjct: 328 TLYLAAGAVIKATQRLRNWPLIAPLPSYGRGRELPGGRYISFIHGDGVRDVIITGENGTI 507
Query: 156 DGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGL 215
DGQG WW+ + ++ L TRP ++E + S I ISN+ NSP W +HP+Y SN+++ +
Sbjct: 508 DGQGDVWWNMWRQRTLQFTRPNLVEFLNSRNIIISNVIFKNSPFWNIHPVYCSNVVVRYV 687
Query: 216 TILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRR 275
TILAP DSPNTDGI+PDS +NV IED++I +GDD +A+KSGWD YGI G PS I IRR
Sbjct: 688 TILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDAYGISYGRPSNDITIRR 867
Query: 276 LTCISPDSAMVALGSEMSG 294
+T SP A +ALGSE SG
Sbjct: 868 ITGSSP-FAGIALGSETSG 921
>TC91368 similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidopsis
thaliana}, partial (44%)
Length = 824
Score = 240 bits (613), Expect(3) = 5e-66
Identities = 112/193 (58%), Positives = 142/193 (73%)
Frame = +1
Query: 36 RKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 95
R HS +T+FGAVGDG TLNTKAF AI L+ +++ GGA+L VP G+WLTGSF+L SH
Sbjct: 166 RPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHL 345
Query: 96 TLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTI 155
TL+L KDA+ILGS + +WP + LPSYGRGR+ P GR SLI+G NLTDVIITG+ G I
Sbjct: 346 TLWLDKDAIILGSTNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNEGII 525
Query: 156 DGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGL 215
DGQGS WW F K L TRP+++E+M S ++ ISNLT +NSP W +HP+Y S + + +
Sbjct: 526 DGQGSIWWSMFRNKTLDYTRPHLVELMNSTRVLISNLTFLNSPFWTIHPVYCSQVTVQNV 705
Query: 216 TILAPVDSPNTDG 228
TILAP+DS G
Sbjct: 706 TILAPLDSQTQMG 744
Score = 27.3 bits (59), Expect(3) = 5e-66
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 233 SCTNVRIEDNFIVSGDDCIAIKS 255
S +V IED +I +GDD IAIKS
Sbjct: 755 SSDDVCIEDWYISTGDDLIAIKS 823
Score = 23.1 bits (48), Expect(3) = 5e-66
Identities = 8/9 (88%), Positives = 9/9 (99%)
Frame = +3
Query: 224 PNTDGINPD 232
PNTDGI+PD
Sbjct: 729 PNTDGIDPD 755
>BE205506 similar to GP|19698861|gb unknown protein {Arabidopsis thaliana},
partial (37%)
Length = 594
Score = 209 bits (533), Expect = 1e-54
Identities = 103/186 (55%), Positives = 135/186 (72%), Gaps = 1/186 (0%)
Frame = +3
Query: 120 LPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMI 179
LPSYG G + P R+ SLI G NL DV+ITG NGTI+GQG WW KF +K+L TR ++
Sbjct: 36 LPSYGYGMERPGPRYGSLIHGQNLKDVVITGHNGTINGQGQAWWKKFRQKRLNYTRGPLL 215
Query: 180 EIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPV-DSPNTDGINPDSCTNVR 238
+IM+S I I+++TL +SP W +HP N+ I G+TILAPV ++PNTDGI+PDSC ++
Sbjct: 216 QIMWSSDIVITDITLRDSPFWTLHPYDCKNLTIKGVTILAPVFEAPNTDGIDPDSCEDML 395
Query: 239 IEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQD 298
IED +I GDD IAIKSGWD+YGI G PS I+IR L S SA +++GSEMSGGI +
Sbjct: 396 IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSAGISIGSEMSGGISN 575
Query: 299 VRIEDV 304
V +E++
Sbjct: 576 VTVENL 593
>TC89800 similar to GP|22136814|gb|AAM91751.1 unknown protein {Arabidopsis
thaliana}, partial (38%)
Length = 669
Score = 201 bits (510), Expect = 6e-52
Identities = 97/170 (57%), Positives = 118/170 (69%)
Frame = +2
Query: 31 PAINCRKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFN 90
P++ R HS + +FGAVGDGKTLNT AF AI L +A+ GGAQL VPPG WLT SFN
Sbjct: 155 PSLKPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFN 334
Query: 91 LTSHFTLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITG 150
LTSH TLFL+K AVI+GSQD W L LPSYGRG + P GR+ SLI G L DV+ITG
Sbjct: 335 LTSHLTLFLEKGAVIIGSQDHYNWDVLDPLPSYGRGLEVPGGRYQSLINGYMLQDVVITG 514
Query: 151 DNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTW 200
+NGTIDG GS WW+ F L +RP+ +E+ S + SNLT +N+P +
Sbjct: 515 NNGTIDGMGSTWWESFXSHSLNYSRPHXVELXASTDVXXSNLTFLNAPAY 664
>TC84804 similar to PIR|T05614|T05614 hypothetical protein F9D16.290 -
Arabidopsis thaliana, partial (43%)
Length = 733
Score = 199 bits (507), Expect = 1e-51
Identities = 98/184 (53%), Positives = 122/184 (66%), Gaps = 1/184 (0%)
Frame = +2
Query: 36 RKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYAN-DGGAQLIVPPGKWLTGSFNLTSH 94
R + LTDFG VGDG TLNTKAF AI ++ + +GG L VPPG +LT FNLTSH
Sbjct: 182 RTDNISLTDFGGVGDGHTLNTKAFREAIYRINHLSQREGGTTLYVPPGVYLTEPFNLTSH 361
Query: 95 FTLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGT 154
TL L AVI +QD S WP + LPSYGRGR+ P GR+ S I G L DV+ITG+NGT
Sbjct: 362 MTLHLAAGAVIKATQDSSNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 541
Query: 155 IDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIING 214
IDGQG WW+ + K+ L TRP ++E + S I ISN+ +SP W +HP+Y SN++I
Sbjct: 542 IDGQGDVWWNMWRKRTLQFTRPNLVEFVNSKDIIISNVIFKDSPFWNIHPVYCSNVVIRF 721
Query: 215 LTIL 218
TIL
Sbjct: 722 ATIL 733
>TC82168 weakly similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidopsis
thaliana}, partial (33%)
Length = 587
Score = 198 bits (503), Expect = 4e-51
Identities = 91/194 (46%), Positives = 134/194 (68%)
Frame = +3
Query: 169 KQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDG 228
+ L TR +++E+M S+ + +SNLT NSP W +HP+Y SN++I G+TILAP+++PNTDG
Sbjct: 3 RTLVHTRGHLLELMNSENVLVSNLTFRNSPFWTIHPVYCSNVVIKGMTILAPLNAPNTDG 182
Query: 229 INPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVAL 288
I+PDS TNV IEDN+I SGDD +AIKSGWD+YGI V PS II+ R++ +P + V +
Sbjct: 183 IDPDSSTNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIVSRVSRTTPTCSGVGI 362
Query: 289 GSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSY 348
GSEMSGGI ++ IE++ N+ + +RIKS GRG ++K++ + + + +K +
Sbjct: 363 GSEMSGGISNITIENLHVWNSAAGVRIKSDNGRGGYIKNVSISNIRMERVKIPIRFSRGS 542
Query: 349 GDHPDNGFDPNALP 362
DHPD+G P
Sbjct: 543 NDHPDDGVGGGKFP 584
>TC93245 similar to PIR|T05995|T05995 hypothetical protein F17M5.200 -
Arabidopsis thaliana, partial (21%)
Length = 778
Score = 161 bits (407), Expect = 6e-40
Identities = 77/147 (52%), Positives = 99/147 (66%)
Frame = +1
Query: 36 RKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 95
RK + DFG VGDGKT NT++F AI + ++ GG+QL +P G WLTGSFNLTS F
Sbjct: 337 RKIIKSIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPNGTWLTGSFNLTSDF 516
Query: 96 TLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTI 155
TLFL AV+LGSQD EWP + LPSYGRGR+ GR SLI + +V+ITG+NGT+
Sbjct: 517 TLFLHHGAVVLGSQDIKEWPIIEPLPSYGRGRERLGGRHISLIHANGVRNVVITGENGTV 696
Query: 156 DGQGSYWWDKFHKKQLTLTRPYMIEIM 182
DGQG WW+ + L T +++E+M
Sbjct: 697 DGQGXMWWELWWNXTLVHTXSHLLELM 777
>BQ146796 similar to GP|22136514|gb unknown protein {Arabidopsis thaliana},
partial (28%)
Length = 598
Score = 100 bits (250), Expect(2) = 2e-39
Identities = 51/103 (49%), Positives = 70/103 (67%)
Frame = +2
Query: 4 VISVVLILGSLAECRVPSSIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLNTKAFNAAI 63
+++++L+L V +++ + P ++ R HS + +FGAVGDGKTLNT AF AI
Sbjct: 119 LVALLLLLALSNAVNVYGDVEICRLN-PKLDPRPHSVSILEFGAVGDGKTLNTIAFQNAI 295
Query: 64 TNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVIL 106
L +A+ GGAQL VPPG WLTGSFNLTSH TLFL+K ++ L
Sbjct: 296 FYLKSFADKGGAQLYVPPGNWLTGSFNLTSHLTLFLEKGSISL 424
Score = 80.1 bits (196), Expect(2) = 2e-39
Identities = 35/63 (55%), Positives = 42/63 (66%)
Frame = +3
Query: 109 QDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHK 168
+D S W + LPSYGRG+D P GR+ SLI G L DV+ITG+NGTIDG G WWD +
Sbjct: 408 KDPSHWNIIEALPSYGRGKDVPDGRYKSLINGNQLEDVVITGNNGTIDGNGMGWWDSYKS 587
Query: 169 KQL 171
L
Sbjct: 588 HSL 596
>TC91378 similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidopsis
thaliana}, partial (23%)
Length = 1185
Score = 155 bits (391), Expect = 4e-38
Identities = 74/153 (48%), Positives = 105/153 (68%)
Frame = +3
Query: 283 SAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVF 342
SA +A+GSEMSGG+ DVR ED+ ++ +AIRIK++ GRG +V++I+V M L +
Sbjct: 18 SAGIAIGSEMSGGVSDVRAEDIHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIAI 197
Query: 343 WMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIE 402
TGSYGDHPD+ +DPNALP I I DV +N+T AG +EGI D F IC+SN+T+
Sbjct: 198 RFTGSYGDHPDDAYDPNALPVIEKITIEDVIGENITKAGLIEGIEGDNFVNICLSNITLN 377
Query: 403 MSAHKKKLPWNCTDISGVTSNVVPKPCELLQEK 435
+S++ PWNC++I G + V P+ CE L+E+
Sbjct: 378 VSSN---YPWNCSNIRGYSDMVFPEACEPLKER 467
>TC82461 similar to GP|14334802|gb|AAK59579.1 putative polygalacturonase
{Arabidopsis thaliana}, partial (10%)
Length = 783
Score = 127 bits (318), Expect = 1e-29
Identities = 58/157 (36%), Positives = 95/157 (59%)
Frame = +3
Query: 273 IRRLTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKG 332
IRR+ + + +A GS+MSGGI +V +E V N++ I ++ GRG ++KDI +
Sbjct: 9 IRRVHLQASYGSTLAFGSDMSGGISNVFVEHVHLYNSKGGIEFRTIRGRGGYMKDIILSD 188
Query: 333 MDLNTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFT 392
+++ + TG G HPD+ FDPNALP + ++D+ N+TIAG G+ PFT
Sbjct: 189 IEMKNIYRAISATGYCGSHPDDKFDPNALPLLDHFIFQDIIGTNITIAGSFAGLQESPFT 368
Query: 393 GICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPC 429
IC+SN+T+ ++ + W C+++SG + +V+P PC
Sbjct: 369 NICLSNITLSVN-YASSTSWECSNVSGFSDSVLPIPC 476
>TC83538 similar to PIR|B86325|B86325 hypothetical protein AAF82228.1
[imported] - Arabidopsis thaliana, partial (17%)
Length = 608
Score = 120 bits (301), Expect = 1e-27
Identities = 58/89 (65%), Positives = 66/89 (73%)
Frame = +3
Query: 42 LTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQK 101
LTDFG VGDG TLNTKAF A++ +S++ N GGAQL VPPG WLT FNLTS TLFL +
Sbjct: 342 LTDFGGVGDGVTLNTKAFERAVSVISKFRNQGGAQLNVPPGFWLTSPFNLTSRMTLFLAR 521
Query: 102 DAVILGSQDESEWPQLLVLPSYGRGRDAP 130
DAVIL QDE WP + LPSYG GR+ P
Sbjct: 522 DAVILAVQDEKYWPLMPALPSYGYGREHP 608
>BE319278 weakly similar to GP|14334802|gb| putative polygalacturonase
{Arabidopsis thaliana}, partial (20%)
Length = 359
Score = 91.7 bits (226), Expect = 6e-19
Identities = 44/97 (45%), Positives = 63/97 (64%)
Frame = +2
Query: 232 DSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSE 291
DS NV IED F+ G D I++KSGWD+YGI G PS+++ IRR+ + + ++ G+E
Sbjct: 53 DSSNNVCIEDCFVSIGFDAISLKSGWDQYGINYGRPSEKVHIRRVHLRAFTGSAISFGTE 232
Query: 292 MSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDI 328
MSGGI V IE V N+ S I ++ GRG ++K+I
Sbjct: 233 MSGGISKVLIEHVNIFNSNSGIEFRTTKGRGGYIKEI 343
>TC91675 similar to GP|6624205|dbj|BAA88472.1 polygalacturonase {Cucumis
sativus}, partial (65%)
Length = 1146
Score = 90.9 bits (224), Expect = 9e-19
Identities = 73/257 (28%), Positives = 121/257 (46%), Gaps = 6/257 (2%)
Frame = +1
Query: 152 NGTIDGQGSYWWDKFHKKQLTLT---RPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSS 208
+G IDG GS WW KK T P + I S I++ LT+ N+
Sbjct: 67 SGVIDGSGSKWWAASCKKNKTNPCKGAPTALTIDTSSSIKVKGLTIQNNQQMHFTISRCD 246
Query: 209 NIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPS 268
++ I G+ + +P DSPNTDGI+ TNV ++D I +GDDCI+I + S
Sbjct: 247 SVRILGVKVASPGDSPNTDGIHISESTNVIVQDCKIGTGDDCISIVNA-----------S 393
Query: 269 QQIIIRRLTCISPDSAMV-ALGSEMSGGIQDVRIEDVTAI-NTESAIRIKSAVGRGAFVK 326
I ++R+ C + +LG + S G+ I D + T + +RIK+ G +VK
Sbjct: 394 SNIKMKRIFCGPGHGISIGSLGKDNSTGVVTKVILDTAFLKGTTNGLRIKTWQGGAGYVK 573
Query: 327 DIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVT-AKNVTIAGKLEG 385
+ + + + + + Y D P + + ++ +IS I Y++V+ N A K +
Sbjct: 574 GVRFQNVRVENVSNPILIDQFYCDSPTSCQNQSSALEISEIMYQNVSGTTNSAKAIKFDC 753
Query: 386 ISNDPFTGICVSNVTIE 402
P + + +SNV +E
Sbjct: 754 SDTVPCSNLVLSNVDLE 804
>TC83380 weakly similar to GP|10176984|dbj|BAB10216. polygalacturonase-like
protein {Arabidopsis thaliana}, partial (21%)
Length = 1220
Score = 88.2 bits (217), Expect = 6e-18
Identities = 95/389 (24%), Positives = 167/389 (42%), Gaps = 8/389 (2%)
Frame = +2
Query: 45 FGAVGDGKTLNTKAFNAAITNL--SQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKD 102
+GA GDG+T ++KAF A L +Y N L+VP G F +
Sbjct: 107 YGAKGDGRTDDSKAFVDAFKALCGGRYGNT----LVVPNGH-------------SFFVRP 235
Query: 103 AVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIF--GTNLTDVIITGDNGTIDGQGS 160
+ S+ + ++ + + + GR SL++ N++ + + G +G I+G G
Sbjct: 236 TLNFSGPCYSKNINIKIMGNILAPKRSDWGRECSLMWLHFFNISGLTLDG-SGVINGNGE 412
Query: 161 YWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAP 220
W + P ++ D +QI+ LT IN P + I S +I I+ + I +P
Sbjct: 413 GWESREKGIGGCPRIPTALQFDKCDGLQINGLTHINGPGAHIAVIDSQDITISHIHINSP 592
Query: 221 VDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCIS 280
S NTDGI+ V I D I SGDDCIA+K G SQ + + +TC
Sbjct: 593 KKSHNTDGIDLTRTIGVNIHDIQIESGDDCIAVKGG-----------SQFVNVSNVTC-G 736
Query: 281 PDSAMVALGSEMSGG----IQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLN 336
P +++GS G +Q +++ T +SA++IK+ G + K I + + +N
Sbjct: 737 PGHG-ISVGSLGGHGSEEFVQHFSVKNCTFNGADSAVKIKTWPGGKGYAKHIIFEDIIIN 913
Query: 337 TMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICV 396
Y ++ Y P+ + KIS I + ++ + + + I +
Sbjct: 914 QTNYPVFIDQHYMRTPEQ----HQAVKISNITFSNIYGTCIGEDAVVLDCAKIGCYNITL 1081
Query: 397 SNVTIEMSAHKKKLPWNCTDISGVTSNVV 425
+ + I KK C ++ G ++++
Sbjct: 1082NQINITSINRKKPASVKCKNVHGTANDII 1168
>TC89869 similar to GP|14334802|gb|AAK59579.1 putative polygalacturonase
{Arabidopsis thaliana}, partial (4%)
Length = 900
Score = 73.9 bits (180), Expect = 1e-13
Identities = 31/71 (43%), Positives = 47/71 (65%)
Frame = +2
Query: 362 PKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVT 421
P + I +D+T KN+TIAG L GI PFT IC+SN+T+ ++ W C+++SG +
Sbjct: 185 PLLDHITLKDITGKNITIAGSLSGIEESPFTNICLSNITLSTNSVSSS-KWECSNVSGFS 361
Query: 422 SNVVPKPCELL 432
+V+PKPC+ L
Sbjct: 362 DSVLPKPCQEL 394
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,891,768
Number of Sequences: 36976
Number of extensions: 182704
Number of successful extensions: 946
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of query: 463
length of database: 9,014,727
effective HSP length: 99
effective length of query: 364
effective length of database: 5,354,103
effective search space: 1948893492
effective search space used: 1948893492
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC121237.2