TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC121234.2 + phase: 0 
         (1118 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AW695602 similar to GP|20147224|g At3g54435 {Arabidopsis thalian...   446  e-125
TC89934 GP|1000353|gb|AAA76715.1| beta-galactosidase {synthetic ...   100  5e-21
CB893285 weakly similar to GP|5091541|gb T10O24.10 {Arabidopsis ...    32  1.8
TC89715 similar to GP|12003384|gb|AAG43549.1 Avr9/Cf-9 rapidly e...    31  2.3
TC77137 similar to PIR|S47140|S47140 pathogenesis-related protei...    30  6.8
TC82090 similar to GP|21387055|gb|AAM47931.1 transmembrane prote...    30  6.8
TC86903 similar to GP|21617881|gb|AAM66931.1 prolyl 4-hydroxylas...    29  8.9
TC77549 similar to GP|21592984|gb|AAM64933.1 photolyase/blue-lig...    29  8.9

>AW695602 similar to GP|20147224|g At3g54435 {Arabidopsis thaliana}, partial
            (14%)
          Length = 650

 Score =  446 bits (1147), Expect = e-125
 Identities = 216/216 (100%), Positives = 216/216 (100%)
 Frame = +3

Query: 861  SYLSRWKAAGIDSVHFIAESCSVQSTTGNAVKLLVVFHGVTKGEEGSLPNQDKSKVLFTT 920
            SYLSRWKAAGIDSVHFIAESCSVQSTTGNAVKLLVVFHGVTKGEEGSLPNQDKSKVLFTT
Sbjct: 3    SYLSRWKAAGIDSVHFIAESCSVQSTTGNAVKLLVVFHGVTKGEEGSLPNQDKSKVLFTT 182

Query: 921  EMTYTIYASGDVILECNVKPNADLPPLPRVGIEMNLEKSLDQVSWYGRGPFECYPDRKAA 980
            EMTYTIYASGDVILECNVKPNADLPPLPRVGIEMNLEKSLDQVSWYGRGPFECYPDRKAA
Sbjct: 183  EMTYTIYASGDVILECNVKPNADLPPLPRVGIEMNLEKSLDQVSWYGRGPFECYPDRKAA 362

Query: 981  AQVAVYEKSVDELHVPYIVPGESGGRADVRWATFLNKNGFGIYTSKYGSSPPMQMSASYY 1040
            AQVAVYEKSVDELHVPYIVPGESGGRADVRWATFLNKNGFGIYTSKYGSSPPMQMSASYY
Sbjct: 363  AQVAVYEKSVDELHVPYIVPGESGGRADVRWATFLNKNGFGIYTSKYGSSPPMQMSASYY 542

Query: 1041 STSELDRAGHDYELVKGDNIEVHLDHKHMGLGGDDS 1076
            STSELDRAGHDYELVKGDNIEVHLDHKHMGLGGDDS
Sbjct: 543  STSELDRAGHDYELVKGDNIEVHLDHKHMGLGGDDS 650


>TC89934 GP|1000353|gb|AAA76715.1| beta-galactosidase {synthetic construct},
            partial (25%)
          Length = 793

 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 67/236 (28%), Positives = 110/236 (46%), Gaps = 6/236 (2%)
 Frame = +2

Query: 846  FWRASIDNDKGGGA------DSYLSRWKAAGIDSVHFIAESCSVQSTTGNAVKLLVVFHG 899
            F RA +DND G         ++++ RWKAAG    H+ AE+  +Q T       +++   
Sbjct: 152  FTRAPLDNDIGVSEATRIDPNAWVERWKAAG----HYQAEAALLQCTADTLADAVLITTA 319

Query: 900  VTKGEEGSLPNQDKSKVLFTTEMTYTIYASGDVILECNVKPNADLPPLPRVGIEMNLEKS 959
                 +G        K LF +  TY I  SG + +  +V+  +D P   R+G+   L + 
Sbjct: 320  HAWQHQG--------KTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQV 475

Query: 960  LDQVSWYGRGPFECYPDRKAAAQVAVYEKSVDELHVPYIVPGESGGRADVRWATFLNKNG 1019
             ++V+W G GP E YPDR  AA    ++  + +++ PY+ P E+G R   R   +     
Sbjct: 476  AERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQW 655

Query: 1020 FGIYTSKYGSSPPMQMSASYYSTSELDRAGHDYELVKGDNIEVHLDHKHMGLGGDD 1075
             G +          Q + S YS  +L    H + L   +   ++++  HMG+GGDD
Sbjct: 656  RGDF----------QFNISRYSQQQLMETSHRHLLHAEEGTWLNIEGFHMGIGGDD 793


>CB893285 weakly similar to GP|5091541|gb T10O24.10 {Arabidopsis thaliana},
           partial (22%)
          Length = 821

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +3

Query: 900 VTKGEEGSLPNQDKSKV---LFTTEMTYTIYASGDVILECNVKPNADLPPL 947
           +T+  EG LP+  ++ V   + T ++T T  A    +LE NVKP  DLP L
Sbjct: 6   LTRYYEGQLPSISENDVDDKVHTPQITVTEAAEKVSLLEENVKPRTDLPHL 158


>TC89715 similar to GP|12003384|gb|AAG43549.1 Avr9/Cf-9 rapidly elicited
           protein 111B {Nicotiana tabacum}, partial (49%)
          Length = 947

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 141 PIYTNVTYPFPLDPPFVPTENPTGCYRMDFHLP 173
           P ++N   P+PL PP  P+ +PT       H P
Sbjct: 525 PCFSNTPAPYPLPPPVAPSPSPTPPLSTKAHYP 427


>TC77137 similar to PIR|S47140|S47140 pathogenesis-related protein -
           chickpea, complete
          Length = 897

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 15/38 (39%), Positives = 21/38 (54%), Gaps = 1/38 (2%)
 Frame = -3

Query: 125 STLPVPSNWQLH-GFDRPIYTNVTYPFPLDPPFVPTEN 161
           S L +PS+     G   P+   +T  FP+DPPF P+ N
Sbjct: 631 SPLALPSSTSFSIGLASPLVWYLTVVFPIDPPFGPSTN 518


>TC82090 similar to GP|21387055|gb|AAM47931.1 transmembrane protein-like
           protein {Arabidopsis thaliana}, partial (62%)
          Length = 829

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 45/173 (26%), Positives = 65/173 (37%), Gaps = 1/173 (0%)
 Frame = +3

Query: 647 DIPNDLNFCLNGLVWPD-RTAHPVLHEVKFLYQPIKVNLSDGKLEIKNTHFFQTTEGLEF 705
           +I N++    + +V PD  T  P L  VK +  P   NL   +     +  F T E   +
Sbjct: 213 EIQNNVVVLADYVVVPDDHTRSPTL-AVK-VTSPYGNNLHHKENTTHGSFAFTTQETGNY 386

Query: 706 SWYISADGYKLGSDKLSLPPIKPQSNYVFDWKSGPWYSLWDSSSSEEIFLTITAKLLNST 765
                 DG   G  ++S+           DWK G     WDS + +E    +  +L    
Sbjct: 387 LACFWVDGGNQGGHEVSVN---------LDWKIGIAAKDWDSVAKKEKIEGVELELRKLE 539

Query: 766 RWVEAGHVVTTAQVQLPAKRDIVPHAINIGSGNLVVETLGDTIKVSQQDVWDI 818
             VEA H          AK  IV    N     L + +LG  I VS   +W +
Sbjct: 540 GAVEAIHENLLYLKGREAKMRIVSERTNGRVAWLSIMSLGICIGVSALQLWHL 698


>TC86903 similar to GP|21617881|gb|AAM66931.1 prolyl 4-hydroxylase  putative
            {Arabidopsis thaliana}, partial (68%)
          Length = 1310

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 19/56 (33%), Positives = 25/56 (43%), Gaps = 4/56 (7%)
 Frame = +3

Query: 1057 GDNIEVHLDHKHMGLGGDDSWSPCVHDQYLVPP----VPYSFSVRLSPVTPATSGH 1108
            G+ I  H + K +    D+SWS C H  Y V P        FS+ L   T + S H
Sbjct: 702  GETIFPHAEGK-LSQPKDESWSECAHKGYAVKPRKGDALLFFSLHLDATTDSKSLH 866


>TC77549 similar to GP|21592984|gb|AAM64933.1 photolyase/blue-light receptor
           PHR2 {Arabidopsis thaliana}, partial (72%)
          Length = 1653

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 11/21 (52%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = +3

Query: 143 YTNVTYPFPL-DPPFVPTENP 162
           +T+++ PF L  PPF+PT+NP
Sbjct: 111 FTSLSLPFSLLSPPFIPTQNP 173


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.318    0.136    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,307,053
Number of Sequences: 36976
Number of extensions: 717567
Number of successful extensions: 3010
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3009
length of query: 1118
length of database: 9,014,727
effective HSP length: 106
effective length of query: 1012
effective length of database: 5,095,271
effective search space: 5156414252
effective search space used: 5156414252
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)