BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121233.12 - phase: 0
(107 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC80461 similar to GP|21592749|gb|AAM64698.1 putative thaumatin-... 91 3e-40
TC81133 similar to PIR|T05493|T05493 pathogenesis-related protei... 146 1e-36
TC80064 similar to PIR|G86333|G86333 hypothetical protein AAF799... 140 6e-35
TC77149 similar to GP|3643249|gb|AAC36740.1| thaumatin-like prot... 124 7e-30
TC87544 similar to SP|P50699|TLPH_ARATH Thaumatin-like protein p... 122 3e-29
TC80897 similar to GP|3241854|dbj|BAA28872.1 thaumatin-like prot... 118 4e-28
TC76694 homologue to GP|3549691|emb|CAA09228.1 thaumatin-like pr... 103 8e-24
TC86847 similar to GP|7406716|emb|CAB85637.1 putative thaumatin-... 100 1e-22
TC87938 similar to GP|20385169|gb|AAM21199.1 pathogenesis-relate... 93 2e-20
TC91258 similar to GP|17979355|gb|AAL49903.1 putative thaumatin ... 90 1e-19
AW694616 similar to PIR|T05492|T054 thaumatin homolog T19K4.130 ... 82 2e-18
TC77106 weakly similar to SP|Q41350|OLP1_LYCES Osmotin-like prot... 84 8e-18
BQ144067 homologue to GP|3549691|emb thaumatin-like protein PR-5... 71 4e-17
BI264555 similar to GP|3643249|gb| thaumatin-like protein precur... 70 2e-13
TC80741 similar to PIR|T05694|T05694 pathogenesis-related protei... 42 3e-08
BG449181 similar to PIR|D96787|D96 protein T4O12.3 [imported] - ... 42 3e-05
TC92814 weakly similar to PIR|G86333|G86333 hypothetical protein... 37 0.001
TC78498 similar to GP|3549693|emb|CAA09229.1 thaumatin-like prot... 33 0.022
TC84050 similar to GP|6273383|gb|AAF06346.1| SCUTL1 {Vitis vinif... 32 0.038
TC81456 similar to PIR|H96665|H96665 protein F22C12.10 [imported... 30 0.14
>TC80461 similar to GP|21592749|gb|AAM64698.1 putative thaumatin-like
protein {Arabidopsis thaliana}, partial (63%)
Length = 983
Score = 90.9 bits (224), Expect(2) = 3e-40
Identities = 37/51 (72%), Positives = 42/51 (81%)
Frame = +2
Query: 1 MVETSGGSGSCQATGCGEDLNRRCPSELRVDGGDACNSACGAFGTPEYCCS 51
+V TSGG+G C TGC DLN++CPSELRVD G ACNSACGAFG PEYCC+
Sbjct: 590 LVATSGGTGPCDVTGCSSDLNKKCPSELRVDDGGACNSACGAFGKPEYCCN 742
Score = 89.0 bits (219), Expect(2) = 3e-40
Identities = 40/61 (65%), Positives = 47/61 (76%)
Frame = +3
Query: 44 GTPEYCCSGAFGSPSSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPS 103
G +GAF +P +C PSVYS+MFKS CPK+YSYA+DD TSTFTC+ A DYTITFCP
Sbjct: 720 GNRNIVVTGAFSNPDTCKPSVYSQMFKSECPKAYSYAYDDKTSTFTCSGA-DYTITFCPF 896
Query: 104 S 104
S
Sbjct: 897 S 899
>TC81133 similar to PIR|T05493|T05493 pathogenesis-related protein 19K4.140
- Arabidopsis thaliana, partial (62%)
Length = 1248
Score = 146 bits (369), Expect = 1e-36
Identities = 70/114 (61%), Positives = 85/114 (74%), Gaps = 9/114 (7%)
Frame = +2
Query: 1 MVETSG--GSGSCQATGCGEDLNRRCPSELRV----DGGD---ACNSACGAFGTPEYCCS 51
++E G G G+C ATGC DLN CP EL+V +GG+ AC SAC AFG P+YCCS
Sbjct: 479 LIEPHGETGGGNCTATGCFVDLNAACPMELKVISSNNGGEESVACKSACEAFGDPQYCCS 658
Query: 52 GAFGSPSSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPSSS 105
GA+GSP +C PS YS+ FKSACP++YSYA+DD TSTFTC +A DYTITFCP+ S
Sbjct: 659 GAYGSPDTCKPSSYSQFFKSACPRAYSYAYDDGTSTFTCASA-DYTITFCPTPS 817
>TC80064 similar to PIR|G86333|G86333 hypothetical protein AAF79910.1
[imported] - Arabidopsis thaliana, partial (75%)
Length = 898
Score = 140 bits (354), Expect = 6e-35
Identities = 70/112 (62%), Positives = 82/112 (72%), Gaps = 6/112 (5%)
Frame = +2
Query: 1 MVETSGGSG-SCQATGCGEDLNRRCPSELRV---DG--GDACNSACGAFGTPEYCCSGAF 54
+V GGSG +C TGC DLN CPSELRV DG G AC SAC AF +PEYCCSGA+
Sbjct: 548 LVAPQGGSGDNCTTTGCISDLNGACPSELRVMSVDGKHGVACKSACEAFNSPEYCCSGAY 727
Query: 55 GSPSSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPSSSP 106
G+P +C PS YS++FK+ACP++YSYA+DD TSTFTC A DYTIT SSP
Sbjct: 728 GTPDTCKPSTYSQLFKNACPRAYSYAYDDKTSTFTCANAVDYTITL--GSSP 877
>TC77149 similar to GP|3643249|gb|AAC36740.1| thaumatin-like protein
precursor Mdtl1 {Malus x domestica}, partial (88%)
Length = 976
Score = 124 bits (310), Expect = 7e-30
Identities = 52/105 (49%), Positives = 75/105 (70%), Gaps = 4/105 (3%)
Frame = +2
Query: 2 VETSGGSGSCQATGCGEDLNRRCPSELRVDGGD----ACNSACGAFGTPEYCCSGAFGSP 57
V GGSG C+++ C ++N CP+EL++ G D AC SAC AF T +YCC G+F +
Sbjct: 446 VTPQGGSGDCKSSSCPANINSVCPAELQLKGSDGSVVACKSACLAFNTDQYCCRGSFNTE 625
Query: 58 SSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCP 102
++C P+ YSE+F++ CP++YSYA+DD +STFTC+ +Y ITFCP
Sbjct: 626 ATCPPTNYSEIFENQCPEAYSYAYDDKSSTFTCSNGPNYAITFCP 760
>TC87544 similar to SP|P50699|TLPH_ARATH Thaumatin-like protein precursor.
[Mouse-ear cress] {Arabidopsis thaliana}, partial (92%)
Length = 1039
Score = 122 bits (305), Expect = 3e-29
Identities = 56/101 (55%), Positives = 66/101 (64%), Gaps = 5/101 (4%)
Frame = +3
Query: 7 GSGSCQATGCGEDLNRRCPSELRVDGGD-----ACNSACGAFGTPEYCCSGAFGSPSSCS 61
GSG C GC DLN CP L+V D C SAC AF +P YCC+G FG+P +C
Sbjct: 486 GSGKCSYAGCVSDLNLMCPVGLQVRSRDKKHVVGCRSACAAFNSPRYCCTGNFGTPQTCK 665
Query: 62 PSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCP 102
P+ YS +FK+ACPK+YSYA+DD TS TCT A Y ITFCP
Sbjct: 666 PTAYSRIFKTACPKAYSYAYDDPTSIATCTNA-SYMITFCP 785
>TC80897 similar to GP|3241854|dbj|BAA28872.1 thaumatin-like protein
precursor {Pyrus pyrifolia}, partial (60%)
Length = 602
Score = 118 bits (295), Expect = 4e-28
Identities = 54/107 (50%), Positives = 69/107 (64%), Gaps = 4/107 (3%)
Frame = +1
Query: 2 VETSGGSGSCQATGCGEDLNRRCPSELRVDGGD----ACNSACGAFGTPEYCCSGAFGSP 57
V GGSG C+ + C ++N CPSEL+V G D AC SAC A +YCC G + +
Sbjct: 142 VTPQGGSGDCKTSSCPGNINVVCPSELQVIGSDGSVVACKSACLALNEDKYCCRGDYNTE 321
Query: 58 SSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPSS 104
C P+ YS +FK+ CP +YSYA+DD +STFTC A DY ITFCPS+
Sbjct: 322 EKCPPTDYSMVFKNQCPGAYSYAYDDKSSTFTCFARPDYAITFCPSN 462
>TC76694 homologue to GP|3549691|emb|CAA09228.1 thaumatin-like protein PR-5b
{Cicer arietinum}, complete
Length = 947
Score = 103 bits (258), Expect = 8e-24
Identities = 47/99 (47%), Positives = 58/99 (58%)
Frame = +1
Query: 8 SGSCQATGCGEDLNRRCPSELRVDGGDACNSACGAFGTPEYCCSGAFGSPSSCSPSVYSE 67
+G C C D+N +CP+ELR GG CN+ C F T EYCC+ GS C P+ +S
Sbjct: 439 NGGCHKISCTADINGQCPNELRTQGG--CNNPCTVFKTNEYCCTNGQGS---CGPTKFSR 603
Query: 68 MFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPSSSP 106
FK C SYSY DD TSTFTC A +Y + FCP +P
Sbjct: 604 FFKDRCHDSYSYPQDDPTSTFTCPAGSNYKVVFCPLGAP 720
>TC86847 similar to GP|7406716|emb|CAB85637.1 putative thaumatin-like
protein {Vitis vinifera}, partial (81%)
Length = 960
Score = 99.8 bits (247), Expect = 1e-22
Identities = 45/99 (45%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Frame = +2
Query: 10 SCQATGCGEDLNRRCPSELRVDGGDACNSACGAFGTPEYCC------SGAFGSPSSCSPS 63
SC C D+N CP+ L+V GG CN+ C F T EYCC S A + ++C P+
Sbjct: 416 SCGTVNCTADINGECPTPLKVPGG--CNNPCTTFDTTEYCCNSDSARSAATNASATCGPT 589
Query: 64 VYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCP 102
YS+ FK CP +YSY DDATSTF+C Y + FCP
Sbjct: 590 TYSKFFKDRCPYAYSYPKDDATSTFSCMGGTTYDVVFCP 706
>TC87938 similar to GP|20385169|gb|AAM21199.1 pathogenesis-related protein
5-1 {Helianthus annuus}, partial (93%)
Length = 882
Score = 92.8 bits (229), Expect = 2e-20
Identities = 41/95 (43%), Positives = 57/95 (59%)
Frame = +1
Query: 8 SGSCQATGCGEDLNRRCPSELRVDGGDACNSACGAFGTPEYCCSGAFGSPSSCSPSVYSE 67
+G + C D+ +CP+EL+ GG CN+AC F T YCC+ +C P+ YS+
Sbjct: 421 NGCTRGIRCTADIIGQCPNELKTQGG--CNNACTVFKTDNYCCNSG-----NCGPTNYSQ 579
Query: 68 MFKSACPKSYSYAFDDATSTFTCTAADDYTITFCP 102
FK+ CP +YSY DDATSTF+C +Y + FCP
Sbjct: 580 YFKNKCPDAYSYPKDDATSTFSCKGGTNYKVVFCP 684
>TC91258 similar to GP|17979355|gb|AAL49903.1 putative thaumatin protein
{Arabidopsis thaliana}, partial (19%)
Length = 766
Score = 90.1 bits (222), Expect = 1e-19
Identities = 39/49 (79%), Positives = 47/49 (95%)
Frame = +2
Query: 56 SPSSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPSS 104
SP++C PS+YSEMFK+ACP+SYSYA+DDA+STFTCTAA DYT+TFCPSS
Sbjct: 2 SPATCRPSIYSEMFKNACPRSYSYAYDDASSTFTCTAA-DYTVTFCPSS 145
>AW694616 similar to PIR|T05492|T054 thaumatin homolog T19K4.130 -
Arabidopsis thaliana, partial (23%)
Length = 647
Score = 82.0 bits (201), Expect(2) = 2e-18
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = -1
Query: 56 SPSSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCPSS 104
+P +C PSVYS+MFKS CPK+YSYA+DD TSTFTC+ A DYTITFCP S
Sbjct: 617 TPDTCKPSVYSQMFKSECPKAYSYAYDDKTSTFTCSGA-DYTITFCPFS 474
Score = 24.3 bits (51), Expect(2) = 2e-18
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3
Query: 47 EYCCSGAFGSP 57
+YCC+GAF +P
Sbjct: 645 KYCCNGAFSNP 613
>TC77106 weakly similar to SP|Q41350|OLP1_LYCES Osmotin-like protein
precursor. [Tomato] {Lycopersicon esculentum}, partial
(88%)
Length = 1071
Score = 84.0 bits (206), Expect = 8e-18
Identities = 39/101 (38%), Positives = 54/101 (52%), Gaps = 6/101 (5%)
Frame = +3
Query: 7 GSGSCQATGCGEDLNRRCPSEL--RVDGGD----ACNSACGAFGTPEYCCSGAFGSPSSC 60
G G C GC DL CP L RV G AC S C AF + E+CC F +P +C
Sbjct: 471 GKGECPVVGCKADLVASCPPVLQHRVPMGHGPVVACKSGCEAFHSDEHCCRNHFNNPQTC 650
Query: 61 SPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFC 101
P+VYS+ FK ACP ++++A D + C++ + + FC
Sbjct: 651 KPTVYSKFFKDACPATFTFAHDSPSLIHQCSSPGELKVIFC 773
>BQ144067 homologue to GP|3549691|emb thaumatin-like protein PR-5b {Cicer
arietinum}, partial (41%)
Length = 701
Score = 71.2 bits (173), Expect(2) = 4e-17
Identities = 32/64 (50%), Positives = 38/64 (59%)
Frame = +1
Query: 43 FGTPEYCCSGAFGSPSSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCP 102
F T EYCC+ GS C P+ +S FK C SYSY DD TSTFTC A +Y + FCP
Sbjct: 91 FKTNEYCCTNGQGS---CGPTKFSRFFKDRCHDSYSYPQDDPTSTFTCPAGSNYKVVFCP 261
Query: 103 SSSP 106
+P
Sbjct: 262 LGAP 273
Score = 30.8 bits (68), Expect(2) = 4e-17
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 16 CGEDLNRRCPSELRVDGGDACNSACGAF 43
C D+N +CP+ LR GG CN+ C F
Sbjct: 15 CTADINGQCPN*LRTQGG--CNNPCTCF 92
>BI264555 similar to GP|3643249|gb| thaumatin-like protein precursor Mdtl1
{Malus x domestica}, partial (77%)
Length = 659
Score = 69.7 bits (169), Expect = 2e-13
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Frame = +2
Query: 6 GGSGSCQATGCGEDLNRRCPSELRVDGGD----ACNSACGAFGTPEYCCSGAFGSPSSCS 61
GG+G C+ + C ++N CP+EL++ G D AC SAC AF P+Y C+G F SP C
Sbjct: 467 GGTGDCKPSSCPANINDVCPTELQMKGPDGKVVACKSACAAFNXPQYXCTGEFNSPDKCK 646
Query: 62 PSVY 65
P+ Y
Sbjct: 647 PTQY 658
>TC80741 similar to PIR|T05694|T05694 pathogenesis-related protein
F20M13.220 - Arabidopsis thaliana, partial (45%)
Length = 705
Score = 42.4 bits (98), Expect(2) = 3e-08
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +1
Query: 1 MVETSGGSGSCQATGCGEDLNRRCPS 26
+VE SGGSG C++TGC DLN++CP+
Sbjct: 568 IVEGSGGSGMCESTGCTSDLNQQCPA 645
Score = 29.6 bits (65), Expect(2) = 3e-08
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 27 ELRVDGGDACNSACGAFGT 45
ELR G AC SAC AFG+
Sbjct: 647 ELRASNGSACKSACEAFGS 703
>BG449181 similar to PIR|D96787|D96 protein T4O12.3 [imported] - Arabidopsis
thaliana, partial (54%)
Length = 671
Score = 42.4 bits (98), Expect = 3e-05
Identities = 26/49 (53%), Positives = 30/49 (61%), Gaps = 6/49 (12%)
Frame = +1
Query: 1 MVETSGGSG-SCQATGCGEDLNRRCPSELR---VDGGD--ACNSACGAF 43
+V GGSG +C TGC DL CPSEL+ VDG + AC SAC AF
Sbjct: 523 LVVPQGGSGDNCTNTGCIRDLLGACPSELKVTTVDGKESVACKSACEAF 669
>TC92814 weakly similar to PIR|G86333|G86333 hypothetical protein AAF79910.1
[imported] - Arabidopsis thaliana, partial (38%)
Length = 622
Score = 37.0 bits (84), Expect = 0.001
Identities = 17/31 (54%), Positives = 21/31 (66%), Gaps = 1/31 (3%)
Frame = +1
Query: 1 MVETSGGSG-SCQATGCGEDLNRRCPSELRV 30
+V GGSG +C +TGC DLN CP+ LRV
Sbjct: 502 LVVPVGGSGENCSSTGCPVDLNNECPTNLRV 594
>TC78498 similar to GP|3549693|emb|CAA09229.1 thaumatin-like protein PR-5a
{Cicer arietinum}, partial (98%)
Length = 764
Score = 32.7 bits (73), Expect = 0.022
Identities = 33/107 (30%), Positives = 43/107 (39%), Gaps = 11/107 (10%)
Frame = +2
Query: 7 GSGSCQATGCGEDLN----RRCPS---ELRVDGGDACN----SACGAFGTPEYCCSGAFG 55
G GSCQ CG L+ R P+ E ++GG+ + S F P F
Sbjct: 290 GRGSCQTGDCGGALSCSVSGRPPTTLAEYTLNGGNNLDYFDISVIDGFNIPM-----EFS 454
Query: 56 SPSSCSPSVYSEMFKSACPKSYSYAFDDATSTFTCTAADDYTITFCP 102
S S+ V + S CP +Y D T TC +Y I FCP
Sbjct: 455 STSNGCNKVLT-CRDSNCPDAYHQPND--VKTVTCPGGTNYRIVFCP 586
>TC84050 similar to GP|6273383|gb|AAF06346.1| SCUTL1 {Vitis vinifera},
partial (49%)
Length = 659
Score = 32.0 bits (71), Expect = 0.038
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 1 MVETSGGSGSCQATGCGEDLNRRCPSELRVDGG 33
+V G G C TGC DLN CP +L+ G
Sbjct: 559 IVAKGGTRGGCSPTGCLVDLNGGCPVDLKATRG 657
>TC81456 similar to PIR|H96665|H96665 protein F22C12.10 [imported] -
Arabidopsis thaliana, partial (20%)
Length = 1071
Score = 30.0 bits (66), Expect = 0.14
Identities = 20/59 (33%), Positives = 25/59 (41%), Gaps = 3/59 (5%)
Frame = +2
Query: 6 GGSGSCQATGCGEDLNRRCPSELRVDGGDACNS-ACG--AFGTPEYCCSGAFGSPSSCS 61
GG C GC + R +R GG C S CG A G+ ++C A G CS
Sbjct: 89 GGGKRCAVAGCTKSARGRTDHCVRHGGGKRCKSEGCGKSAQGSTDFC--KAHGGGKRCS 259
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.316 0.130 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,540,281
Number of Sequences: 36976
Number of extensions: 71427
Number of successful extensions: 428
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of query: 107
length of database: 9,014,727
effective HSP length: 83
effective length of query: 24
effective length of database: 5,945,719
effective search space: 142697256
effective search space used: 142697256
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)
Medicago: description of AC121233.12