BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121233.1 - phase: 0 /pseudo
(1172 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF520146 similar to GP|14530758|em putative osmosensor histidine... 462 e-130
TC92356 similar to PIR|T00842|T00842 probable histidine kinase [... 204 e-106
TC86951 homologue to GP|2745902|gb|AAB94773.1| ERS-like ethylene... 130 3e-30
TC80422 similar to GP|13359155|dbj|BAB33310. cytokinin receptor ... 118 2e-26
BI308772 similar to GP|22353121|g cytokinin receptor {Catharanth... 94 2e-19
TC80227 similar to GP|13537198|dbj|BAB40775. histidine kinase {A... 82 9e-16
TC92225 similar to GP|13537198|dbj|BAB40775. histidine kinase {A... 77 4e-14
AW686764 similar to GP|13537198|d histidine kinase {Arabidopsis ... 74 3e-13
TC84455 similar to GP|21666555|gb|AAM73756.1 ethylene receptor {... 64 3e-10
TC91441 weakly similar to GP|6175182|gb|AAF04908.1| putative eth... 62 1e-09
TC82875 similar to GP|15131529|emb|CAC48384. ethylene receptor {... 61 3e-09
TC92741 similar to GP|10281006|dbj|BAB13743. pseudo-response reg... 60 5e-09
BI266143 similar to GP|13537196|d histidine kinase {Arabidopsis ... 59 1e-08
CB065309 similar to GP|15157114|gb AGR_C_3618p {Agrobacterium tu... 58 2e-08
TC81494 similar to GP|13173408|gb|AAK14395.1 response regulator ... 52 2e-06
CB065296 weakly similar to OMNI|NT01MC1562 sensory box sensor hi... 50 7e-06
BF520792 similar to GP|15131533|em ethylene receptor {Fragaria x... 49 1e-05
TC78129 similar to PIR|T47764|T47764 responce reactor 4 - Arabid... 47 3e-05
TC82870 weakly similar to GP|22209014|gb|AAF20093.2 putative eth... 44 3e-04
TC83688 weakly similar to GP|10281000|dbj|BAB13741. pseudo-respo... 42 0.001
>BF520146 similar to GP|14530758|em putative osmosensor histidine Kinase
{Populus euramericana}, partial (65%)
Length = 676
Score = 462 bits (1188), Expect = e-130
Identities = 225/225 (100%), Positives = 225/225 (100%)
Frame = +2
Query: 550 RELEGLVDMFSVQCINHNVEIILDLSDDMPKLVRGDSARVVQIFANLINNSIKFTLSGHI 609
RELEGLVDMFSVQCINHNVEIILDLSDDMPKLVRGDSARVVQIFANLINNSIKFTLSGHI
Sbjct: 2 RELEGLVDMFSVQCINHNVEIILDLSDDMPKLVRGDSARVVQIFANLINNSIKFTLSGHI 181
Query: 610 ILRGWCENPNSYGDSENFTLEQKPFGCSRKTKMKQHENHSKKASNIDNKMILWFEVDDTG 669
ILRGWCENPNSYGDSENFTLEQKPFGCSRKTKMKQHENHSKKASNIDNKMILWFEVDDTG
Sbjct: 182 ILRGWCENPNSYGDSENFTLEQKPFGCSRKTKMKQHENHSKKASNIDNKMILWFEVDDTG 361
Query: 670 CGIDPSKWDSVFESFEQADLSTTRLHGGTGLGLCIVRSLVNKMGGEIKIVKKEGPGTLMR 729
CGIDPSKWDSVFESFEQADLSTTRLHGGTGLGLCIVRSLVNKMGGEIKIVKKEGPGTLMR
Sbjct: 362 CGIDPSKWDSVFESFEQADLSTTRLHGGTGLGLCIVRSLVNKMGGEIKIVKKEGPGTLMR 541
Query: 730 LYMQLTAPVDATEQHCQVDFANNNLMVLLALHGNMSRLITSKWLQ 774
LYMQLTAPVDATEQHCQVDFANNNLMVLLALHGNMSRLITSKWLQ
Sbjct: 542 LYMQLTAPVDATEQHCQVDFANNNLMVLLALHGNMSRLITSKWLQ 676
>TC92356 similar to PIR|T00842|T00842 probable histidine kinase [imported] -
Arabidopsis thaliana, partial (15%)
Length = 947
Score = 204 bits (520), Expect(2) = e-106
Identities = 101/143 (70%), Positives = 115/143 (79%)
Frame = +2
Query: 823 ISIQELPNPTFVIVVDIDLLDLSTDIWKEQLNFLHKYYARAKFVWLQNHDSSNTVKTELR 882
+SI+++ NP FVIVVDI LLDLSTDIWKEQLNFLHKY+ RAKFVW+ NHD+SNT+KTELR
Sbjct: 5 LSIKDMRNPIFVIVVDIGLLDLSTDIWKEQLNFLHKYFGRAKFVWMLNHDTSNTIKTELR 184
Query: 883 KKGHILTVNKPLYKAKMIHILEDVIKERNVEVQKKNMKEDDLHESLEIEYTHHCDVASSD 942
+KGH+L VNKPLYKAKMIHILE VIKERN E+QKKNMKE DLHE LEI+ TH SSD
Sbjct: 185 RKGHLLMVNKPLYKAKMIHILEAVIKERNHELQKKNMKEGDLHEFLEIDSTHFDAATSSD 364
Query: 943 GSDISEIGSSNLVTANGEKQREE 965
SDISEI +V E + E
Sbjct: 365 DSDISEISEKPIVKLTNENEHLE 433
Score = 200 bits (509), Expect(2) = e-106
Identities = 115/160 (71%), Positives = 122/160 (75%), Gaps = 17/160 (10%)
Frame = +3
Query: 1003 EDSKGGETS-------RVSGSSKAMNGKKSLEGLRILLAEDTAVIQRVATIMLEKMGATV 1055
E+ K ET+ RV+ + K +N KKSLEGLRILLAEDT VIQRVATIMLEKMGA V
Sbjct: 471 EEKKAKETNFATQGYDRVTRTRKEVNDKKSLEGLRILLAEDTPVIQRVATIMLEKMGAVV 650
Query: 1056 VAVGDGQQAVDALNGMPGVE----------RNTITSQTEILSFPSYDLILMDCQMPKMDG 1105
VAVGDGQQAVDALN M E RNT SQTEIL+ YDLILMDCQMPKMDG
Sbjct: 651 VAVGDGQQAVDALNYMASAEDCRRESLQKDRNT-RSQTEILTCHQYDLILMDCQMPKMDG 827
Query: 1106 YEATKEIRKSEIGTSFHIPIVALTAHAMSCDEAKCLEVGM 1145
YEATKEIRKSE GT HIPIVALTAHAMSCDEAKCL+VGM
Sbjct: 828 YEATKEIRKSEEGTGKHIPIVALTAHAMSCDEAKCLKVGM 947
>TC86951 homologue to GP|2745902|gb|AAB94773.1| ERS-like ethylene receptor
{Pisum sativum}, complete
Length = 2274
Score = 130 bits (327), Expect = 3e-30
Identities = 82/256 (32%), Positives = 130/256 (50%)
Frame = +3
Query: 461 ARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILLSDDRLTNEQCATVTQIRKCSTA 520
ARR+AE + + ++ FLA M+HE+RTPM A+I L +LL + LT EQ + + K S
Sbjct: 1152 ARREAEMAIHARNDFLAVMNHEMRTPMHAIIALSSLLLETE-LTPEQRVMIETVLKSSNV 1328
Query: 521 LLHLLNNILDISKVESGKLVLEEAEFDFGRELEGLVDMFSVQCINHNVEIILDLSDDMPK 580
L L+N++LD+S++E G L LE A+ + L ++++ + I L L+ D+P
Sbjct: 1329 LAALINDVLDLSRLEDGSLELEMAKINLHGVLGEVIELIKPIASVKKLPITLILAPDLPT 1508
Query: 581 LVRGDSARVVQIFANLINNSIKFTLSGHIILRGWCENPNSYGDSENFTLEQKPFGCSRKT 640
GD R++Q N++ N++K+T G++ +R P S D
Sbjct: 1509 HAIGDEKRLMQTLLNVVGNAVKYTKEGYVSIRASVAKPESLQD----------------- 1637
Query: 641 KMKQHENHSKKASNIDNKMILWFEVDDTGCGIDPSKWDSVFESFEQADLSTTRLHGGTGL 700
+ E + ++ D + +V D+GCGI P +F F Q+ R G+GL
Sbjct: 1638 -WRPPEFY---PASSDGHFYIRVQVKDSGCGILPQDIPHLFTKFTQSQSGPVRSSSGSGL 1805
Query: 701 GLCIVRSLVNKMGGEI 716
GL I + VN MGG I
Sbjct: 1806 GLAICKRFVNLMGGHI 1853
>TC80422 similar to GP|13359155|dbj|BAB33310. cytokinin receptor CRE1a
{Arabidopsis thaliana}, partial (26%)
Length = 1032
Score = 118 bits (295), Expect = 2e-26
Identities = 67/189 (35%), Positives = 109/189 (57%)
Frame = +1
Query: 424 ISASLCIIVIGCVCILILTNGVSKEMNLRAELISHLEARRKAEASSNYKSQFLANMSHEL 483
+S ++ VI + IL + + + + E + +AEA+ KSQFLA +SHE+
Sbjct: 196 LSTAILFFVILLLIGYILYGAGNHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEI 375
Query: 484 RTPMAAVIGLLDILLSDDRLTNEQCATVTQIRKCSTALLHLLNNILDISKVESGKLVLEE 543
RTPM ++G+L +LL + L + Q + C AL+ L+N +LD +K+E+GKL LE
Sbjct: 376 RTPMNGILGMLGLLLRTE-LNSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEA 552
Query: 544 AEFDFGRELEGLVDMFSVQCINHNVEIILDLSDDMPKLVRGDSARVVQIFANLINNSIKF 603
FD L+ ++ +FS + + +E+ + +SD +P +V GD R QI NL+ NS+KF
Sbjct: 553 VPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKF 732
Query: 604 TLSGHIILR 612
T GHI ++
Sbjct: 733 TERGHIFVK 759
>BI308772 similar to GP|22353121|g cytokinin receptor {Catharanthus roseus},
partial (25%)
Length = 812
Score = 94.4 bits (233), Expect = 2e-19
Identities = 59/187 (31%), Positives = 102/187 (53%), Gaps = 1/187 (0%)
Frame = +1
Query: 426 ASLCIIVIGCVCILILTNGVSKEMNLRAELISHLEARRKAEASSNYKSQFLANMSHELRT 485
AS+ + VI + I +++ + + E + +AEA+ KSQFLA +SHE+RT
Sbjct: 208 ASVGVFVITFLLGYIFYAAINRIAKVEDDYCQMRELKVRAEAADVAKSQFLATVSHEIRT 387
Query: 486 PMAAVIGLLDILLSDDRLTNEQCATVTQIRKCSTALLHLLNNILDISKVESGKLVLEEAE 545
PM V+G+L +L+ D L + Q L+ +++ +L +K+E+GKL LE
Sbjct: 388 PMNGVLGMLQMLMDTD-LDDNQMDFAQTAHTSGKDLISVISEVLYQAKIEAGKLELEAVA 564
Query: 546 FDFGRELEGLVDMFSVQCINHNVEIILDLSDDMPKLVRGDSARVVQIFANLINNSIKFTL 605
F L+ ++ +FS + +E+ + S+ +P++V GD R QI NL+ NS+KF
Sbjct: 565 FHPHAILDEVLSLFSEKSDEKGIELSVYASNQVPEVVIGDPKRFRQIITNLVGNSLKFIH 744
Query: 606 S-GHIIL 611
+ GH+ +
Sbjct: 745 NKGHVFV 765
>TC80227 similar to GP|13537198|dbj|BAB40775. histidine kinase {Arabidopsis
thaliana}, partial (22%)
Length = 1693
Score = 82.4 bits (202), Expect = 9e-16
Identities = 48/135 (35%), Positives = 69/135 (50%), Gaps = 6/135 (4%)
Frame = +3
Query: 1026 LEGLRILLAEDTAVIQRVATIMLEKMGATVVAVGDGQQAVDALNGMPGVERNTITSQTEI 1085
L G +IL+ +D V + VA L+K GA VV V G+ A+ +L
Sbjct: 753 LVGRKILIVDDNGVNRAVAAGALKKYGADVVCVSSGKDAISSLKPPH------------- 893
Query: 1086 LSFPSYDLILMDCQMPKMDGYEATKEIRKSE------IGTSFHIPIVALTAHAMSCDEAK 1139
+D MD QMP+MDG+EAT IR+ E ++H+PI+A+TA + K
Sbjct: 894 ----QFDACFMDIQMPEMDGFEATGRIREMEQNVNREASINWHVPILAMTADVIQATHEK 1061
Query: 1140 CLEVGMDAYLTKPID 1154
CL GMD Y++KP +
Sbjct: 1062 CLRCGMDGYVSKPFE 1106
Score = 48.9 bits (115), Expect = 1e-05
Identities = 26/62 (41%), Positives = 33/62 (52%)
Frame = +3
Query: 665 VDDTGCGIDPSKWDSVFESFEQADLSTTRLHGGTGLGLCIVRSLVNKMGGEIKIVKKEGP 724
V+DTG GI +F F Q S +R HGGTG+GL I + LV M GEI +
Sbjct: 27 VEDTGDGIPRESQPLIFTPFMQVGSSISRKHGGTGIGLSISKCLVGLMNGEIGFASEPKT 206
Query: 725 GT 726
G+
Sbjct: 207 GS 212
>TC92225 similar to GP|13537198|dbj|BAB40775. histidine kinase {Arabidopsis
thaliana}, partial (30%)
Length = 1042
Score = 77.0 bits (188), Expect = 4e-14
Identities = 46/134 (34%), Positives = 78/134 (57%)
Frame = +3
Query: 427 SLCIIVIGCVCILILTNGVSKEMNLRAELISHLEARRKAEASSNYKSQFLANMSHELRTP 486
S+ I+VI + I VS+ + + + +++AEA+ KSQFLA +SHE+RTP
Sbjct: 615 SIGILVIALLVGHIFHATVSRIAKVEDDYQEMMVLKKRAEAADVAKSQFLATVSHEIRTP 794
Query: 487 MAAVIGLLDILLSDDRLTNEQCATVTQIRKCSTALLHLLNNILDISKVESGKLVLEEAEF 546
M V+G++++L+ D L Q V + AL+ ++N +LD +K+ESGK+ LE F
Sbjct: 795 MNGVLGMMNMLMDTD-LDVTQQEYVRTAQGSGKALVSIINEVLDQAKIESGKIELEAVLF 971
Query: 547 DFGRELEGLVDMFS 560
D ++ ++ +FS
Sbjct: 972 DIRSIMDDVLSLFS 1013
>AW686764 similar to GP|13537198|d histidine kinase {Arabidopsis thaliana},
partial (12%)
Length = 652
Score = 73.9 bits (180), Expect = 3e-13
Identities = 57/169 (33%), Positives = 83/169 (48%), Gaps = 16/169 (9%)
Frame = +2
Query: 574 LSDDMPKLVRGDSARVVQIFANLINNSIKFTLSGHIILRGWC----------ENPNSYGD 623
+SD +P+ + GD R QI NL+ NSIKFT GHI + E ++ D
Sbjct: 14 VSDQVPQQLIGDPGRFRQIITNLMGNSIKFTDKGHIFVTIHLVEEVFHSIEVERESTSKD 193
Query: 624 SENFTLEQKPFGCSRKT----KMKQHENH--SKKASNIDNKMILWFEVDDTGCGIDPSKW 677
+E+ TL P R++ + HE S +++ ++ + L V+DTG GI
Sbjct: 194 AEH-TLSGFPVADGRRSWEGFRAFSHEGPLGSFSSTSSNDLISLIVSVEDTGDGIPLESQ 370
Query: 678 DSVFESFEQADLSTTRLHGGTGLGLCIVRSLVNKMGGEIKIVKKEGPGT 726
+F F Q S +R HGGTG+GL I + LV M GEI V + G+
Sbjct: 371 PMIFTPFMQVGPSISRKHGGTGIGLSISKCLVGLMNGEIGFVSEPKIGS 517
>TC84455 similar to GP|21666555|gb|AAM73756.1 ethylene receptor {Prunus
persica}, partial (35%)
Length = 803
Score = 63.9 bits (154), Expect = 3e-10
Identities = 35/77 (45%), Positives = 51/77 (65%)
Frame = +2
Query: 461 ARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILLSDDRLTNEQCATVTQIRKCSTA 520
ARR+AE + + ++ FLA M+HE+RTPM A+I L ++ D LT EQ V I K S
Sbjct: 401 ARREAETAIHARNDFLAVMNHEMRTPMHAIIALSSLMQETD-LTAEQRLMVETILKSSNL 577
Query: 521 LLHLLNNILDISKVESG 537
L L+N++LD+S++E G
Sbjct: 578 LATLVNDVLDLSRLEDG 628
>TC91441 weakly similar to GP|6175182|gb|AAF04908.1| putative ethylene
receptor {Arabidopsis thaliana}, partial (30%)
Length = 761
Score = 62.4 bits (150), Expect = 1e-09
Identities = 44/172 (25%), Positives = 78/172 (44%), Gaps = 5/172 (2%)
Frame = +3
Query: 431 IVIGCVCILILTNGVSKEMNLRAELISHL-----EARRKAEASSNYKSQFLANMSHELRT 485
+V V + + V +E +L E + ++++ A +S + F MSH LR
Sbjct: 195 VVADQVAVALSHASVLEESHLMREKLEEQNRALQQSQKNAMMASQARKSFQTVMSHGLRR 374
Query: 486 PMAAVIGLLDILLSDDRLTNEQCATVTQIRKCSTALLHLLNNILDISKVESGKLVLEEAE 545
PM +V+G+L L + + EQ + K L L+N+++DIS+ + G L LE
Sbjct: 375 PMHSVVGMLS-LFQEGNMRPEQKIIGDTMLKVGNVLSSLVNDVMDISENKKGGLQLEMKP 551
Query: 546 FDFGRELEGLVDMFSVQCINHNVEIILDLSDDMPKLVRGDSARVVQIFANLI 597
F L + C+ +D+ +P+ V GD AR Q+ +++
Sbjct: 552 FLLHSMLREAACIAKCLCVYQGFGFQIDVEKSLPEKVLGDEARTFQVIMHIV 707
>TC82875 similar to GP|15131529|emb|CAC48384. ethylene receptor {Fragaria x
ananassa}, partial (39%)
Length = 1118
Score = 60.8 bits (146), Expect = 3e-09
Identities = 46/158 (29%), Positives = 67/158 (42%)
Frame = +3
Query: 568 VEIILDLSDDMPKLVRGDSARVVQIFANLINNSIKFTLSGHIILRGWCENPNSYGDSENF 627
+ + L + D+P GD R++QI N++ N++KFT G I + P S+ D
Sbjct: 12 LSLTLHFASDLPVHAIGDEKRLMQILLNVVGNAVKFTKEGSISITVVVVKPESFRDIRFP 191
Query: 628 TLEQKPFGCSRKTKMKQHENHSKKASNIDNKMILWFEVDDTGCGIDPSKWDSVFESFEQA 687
P D+ L +V D+G GI+P +F F Q
Sbjct: 192 DFLPVPS---------------------DSHFYLRVQVKDSGSGINPQDIPKLFTKFAQN 308
Query: 688 DLSTTRLHGGTGLGLCIVRSLVNKMGGEIKIVKKEGPG 725
T+ G+GLGL I + VN M G I I + EG G
Sbjct: 309 QTLGTKNPVGSGLGLAICKRFVNLMEGHIWI-ESEGIG 419
>TC92741 similar to GP|10281006|dbj|BAB13743. pseudo-response regulator 5
{Arabidopsis thaliana}, partial (19%)
Length = 645
Score = 60.1 bits (144), Expect = 5e-09
Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 6/161 (3%)
Frame = +3
Query: 999 RAKGEDSKGGETSRVSGSSKAMNGKKSLEG------LRILLAEDTAVIQRVATIMLEKMG 1052
+ + E+ GG SR +G M G E LR+LL E +++ T +L K
Sbjct: 129 KVREEEGSGGTESRGAGGGGEMKGLMRWEKFLPKMVLRVLLVEADDCTRQIITALLRKCN 308
Query: 1053 ATVVAVGDGQQAVDALNGMPGVERNTITSQTEILSFPSYDLILMDCQMPKMDGYEATKEI 1112
V AV DG +A + L G P S DLIL + +P + GY I
Sbjct: 309 YKVAAVADGLKAWEILKGRPR----------------SIDLILTEVDLPAISGYALLTLI 440
Query: 1113 RKSEIGTSFHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPI 1153
+ +I S IP++ +++ KC+ G YL KPI
Sbjct: 441 MEHDICKS--IPVIMMSSQDSVSTVYKCMLRGAADYLVKPI 557
>BI266143 similar to GP|13537196|d histidine kinase {Arabidopsis thaliana},
partial (9%)
Length = 470
Score = 58.5 bits (140), Expect = 1e-08
Identities = 30/62 (48%), Positives = 39/62 (62%)
Frame = +2
Query: 665 VDDTGCGIDPSKWDSVFESFEQADLSTTRLHGGTGLGLCIVRSLVNKMGGEIKIVKKEGP 724
V+DTG GI +F F QAD ST+R +GGTG+GL I + LV+ MGGEI V +
Sbjct: 92 VEDTGIGIPTDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMGGEIGFVSEPEI 271
Query: 725 GT 726
G+
Sbjct: 272 GS 277
>CB065309 similar to GP|15157114|gb AGR_C_3618p {Agrobacterium tumefaciens str.
C58 (Cereon)}, partial (83%)
Length = 627
Score = 57.8 bits (138), Expect = 2e-08
Identities = 42/137 (30%), Positives = 70/137 (50%), Gaps = 2/137 (1%)
Frame = +3
Query: 1031 ILLAEDTAVIQRVATIMLEK--MGATVVAVGDGQQAVDALNGMPGVERNTITSQTEILSF 1088
ILL ED + + LE+ + V+ + DG A+D L + RN + +
Sbjct: 21 ILLVEDNPRDLELTLLALERSQLANEVIVLRDGADALDYL-----LRRNAYADRDD---- 173
Query: 1089 PSYDLILMDCQMPKMDGYEATKEIRKSEIGTSFHIPIVALTAHAMSCDEAKCLEVGMDAY 1148
+ ++L+D ++PK+DG E KE+R + S IP V LT+ D + E+G++AY
Sbjct: 174 GNPAVLLLDLKLPKVDGLEVLKEVRATPELRS--IPTVMLTSSREEPDLLRAYELGVNAY 347
Query: 1149 LTKPIDFKLMESTILSL 1165
+ KP++FK + I L
Sbjct: 348 VVKPVEFKEFVAAISDL 398
>TC81494 similar to GP|13173408|gb|AAK14395.1 response regulator protein
{Dianthus caryophyllus}, partial (53%)
Length = 793
Score = 51.6 bits (122), Expect = 2e-06
Identities = 39/145 (26%), Positives = 74/145 (50%), Gaps = 1/145 (0%)
Frame = +1
Query: 1010 TSRVSGSSKAMNGKKSLEGLRILLAEDTAVIQRVATIMLEKMGATVVAVGDGQQAVDALN 1069
+ RV ++ ++ + + +L +D+ V ++V +L+ V AV G +A+ L
Sbjct: 31 SKRVMETNSVVSIGVDSQEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLG 210
Query: 1070 GMPGVERNTITSQTEILSFPSYDLILMDCQMPKMDGYEATKEIRKSEIGTSFH-IPIVAL 1128
+ E+ T S + DL++ D MP M GYE K+I++S T+F IP+V +
Sbjct: 211 LVD--EKETSESDAFVPGL-KVDLVITDYCMPGMTGYELLKKIKES---TTFRAIPVVIM 372
Query: 1129 TAHAMSCDEAKCLEVGMDAYLTKPI 1153
++ + +CLE G + ++ KP+
Sbjct: 373 SSENILPRIDRCLEEGAEDFIVKPV 447
>CB065296 weakly similar to OMNI|NT01MC1562 sensory box sensor histidine
kinase/response regulator {Magnetococcus sp. MC-1},
partial (5%)
Length = 622
Score = 49.7 bits (117), Expect = 7e-06
Identities = 27/56 (48%), Positives = 37/56 (65%), Gaps = 1/56 (1%)
Frame = +1
Query: 448 EMNLRAELISHL-EARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILLSDDR 502
++ L L+ L +A+ A +S KS FLA MSHE+RTPM AVIGLL++ L D +
Sbjct: 442 QLGLSRGLLEQLRQAKDDAVRASQTKSTFLATMSHEIRTPMNAVIGLLELALEDSQ 609
>BF520792 similar to GP|15131533|em ethylene receptor {Fragaria x ananassa},
partial (22%)
Length = 619
Score = 48.5 bits (114), Expect = 1e-05
Identities = 37/119 (31%), Positives = 56/119 (46%), Gaps = 1/119 (0%)
Frame = +1
Query: 1015 GSSKAMNGKKSL-EGLRILLAEDTAVIQRVATIMLEKMGATVVAVGDGQQAVDALNGMPG 1073
G S N SL GL++LL ++ V + V +L+K+G +V + G + + + +
Sbjct: 298 GESSERNYSNSLLRGLQVLLVDNDDVNRAVTQKLLQKLGCSVTSASTGFECLTVIGPVGS 477
Query: 1074 VERNTITSQTEILSFPSYDLILMDCQMPKMDGYEATKEIRKSEIGTSFHIPIVALTAHA 1132
S +IL+D QMP +DG+E IRK + G IVALTA A
Sbjct: 478 ----------------SIQVILLDLQMPDIDGFEVAARIRKFKSGN--RPIIVALTASA 600
>TC78129 similar to PIR|T47764|T47764 responce reactor 4 - Arabidopsis
thaliana, partial (62%)
Length = 1307
Score = 47.4 bits (111), Expect = 3e-05
Identities = 32/129 (24%), Positives = 65/129 (49%), Gaps = 6/129 (4%)
Frame = +1
Query: 1031 ILLAEDTAVIQRVATIMLEKMGATVVAVGDGQQAVDALNGMPGVERNTITSQTEILSFPS 1090
+L +D+ + +++ +L+ V V G +A++ L G+ N T+ FP+
Sbjct: 409 VLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFL----GLCENDETNPNTPSVFPN 576
Query: 1091 ------YDLILMDCQMPKMDGYEATKEIRKSEIGTSFHIPIVALTAHAMSCDEAKCLEVG 1144
+L++ D MP M GY+ K+I++S + +IP+V +++ + +CLE G
Sbjct: 577 NHQEVEVNLVITDYCMPGMTGYDLLKKIKESS--SLRNIPVVIMSSENVPSRINRCLEEG 750
Query: 1145 MDAYLTKPI 1153
+ + KP+
Sbjct: 751 AEEFFLKPV 777
>TC82870 weakly similar to GP|22209014|gb|AAF20093.2 putative ethylene
receptor {Nicotiana tabacum}, partial (9%)
Length = 492
Score = 44.3 bits (103), Expect = 3e-04
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +3
Query: 1090 SYDLILMDCQMPKMDGYEATKEIRKSEIGTSFHIPIVALTAHAMSCDEAKCLEVGMDAYL 1149
S+ +I++D MP+MDG+E IRK G ++ + I+AL A A + +C+ GM+ +
Sbjct: 27 SFKIIMLDIHMPEMDGFEVAARIRKFN-GPNWPL-IIALIAXAEKQVKDRCMLAGMNGVI 200
Query: 1150 TKPI 1153
KPI
Sbjct: 201 RKPI 212
>TC83688 weakly similar to GP|10281000|dbj|BAB13741. pseudo-response regulator
9 {Arabidopsis thaliana}, partial (27%)
Length = 687
Score = 42.4 bits (98), Expect = 0.001
Identities = 29/127 (22%), Positives = 58/127 (44%)
Frame = +3
Query: 1027 EGLRILLAEDTAVIQRVATIMLEKMGATVVAVGDGQQAVDALNGMPGVERNTITSQTEIL 1086
+ + +LL E +R+ T +L V+AV +G +A + + M ++
Sbjct: 66 KNVTVLLVESDRATRRLITSLLNNCHYKVIAVSNGSKAWEMMK-MKAID----------- 209
Query: 1087 SFPSYDLILMDCQMPKMDGYEATKEIRKSEIGTSFHIPIVALTAHAMSCDEAKCLEVGMD 1146
DL+L + ++P + G+ I + EIG +IP++ +++ KC+ G
Sbjct: 210 ----VDLVLTEMELPAISGFALLSLIMEHEIGR--NIPVIMMSSRDSRSTVMKCMCRGAA 371
Query: 1147 AYLTKPI 1153
+L KP+
Sbjct: 372 DFLIKPV 392
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.318 0.133 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,319,083
Number of Sequences: 36976
Number of extensions: 459254
Number of successful extensions: 2526
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 2481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2511
length of query: 1172
length of database: 9,014,727
effective HSP length: 107
effective length of query: 1065
effective length of database: 5,058,295
effective search space: 5387084175
effective search space used: 5387084175
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Medicago: description of AC121233.1