BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC119419.7 - phase: 0
(208 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC87984 weakly similar to GP|10177368|dbj|BAB10659. contains sim... 110 3e-25
TC92783 similar to PIR|T49020|T49020 hypothetical protein F3C22.... 109 7e-25
AW690384 similar to GP|23496006|gb hypothetical protein {Plasmod... 109 9e-25
BG646112 weakly similar to GP|10177368|dbj contains similarity t... 101 2e-22
BM815011 similar to PIR|T49178|T491 hypothetical protein T20N10.... 99 1e-21
AI974570 similar to GP|10177368|dbj contains similarity to heat ... 98 2e-21
BG581615 similar to GP|10177368|dbj contains similarity to heat ... 91 2e-19
BQ136915 91 3e-19
AW690594 similar to GP|23498163|emb hypothetical protein {Plasmo... 89 1e-18
BI265577 similar to GP|10177368|dbj contains similarity to heat ... 85 2e-17
BG450859 weakly similar to GP|21553400|gb| unknown {Arabidopsis ... 61 3e-10
TC91590 weakly similar to GP|10178235|dbj|BAB11667. gene_id:MDJ2... 56 9e-09
BI311381 weakly similar to PIR|T46128|T461 hypothetical protein ... 55 2e-08
BQ124147 similar to GP|10177836|dbj emb|CAB62440.1~gene_id:MCD7.... 55 2e-08
TC80379 similar to GP|9802755|gb|AAF99824.1| Unknown protein {Ar... 55 2e-08
CB894052 54 3e-08
BE324624 weakly similar to GP|20042914|gb| Unknown protein {Oryz... 54 3e-08
TC79593 similar to GP|10177368|dbj|BAB10659. contains similarity... 54 3e-08
TC82690 weakly similar to GP|9802755|gb|AAF99824.1| Unknown prot... 54 6e-08
AL381150 weakly similar to GP|14028988|gb| Unknown protein {Oryz... 53 7e-08
>TC87984 weakly similar to GP|10177368|dbj|BAB10659. contains similarity to
heat shock transcription factor HSF30~gene_id:K16L22.13,
partial (5%)
Length = 696
Score = 110 bits (276), Expect = 3e-25
Identities = 72/170 (42%), Positives = 97/170 (56%), Gaps = 4/170 (2%)
Frame = +3
Query: 11 ASEENDDRISSLPDDVLNHILSYLPIKTTVATGRL-SRQWQHLWKHLHVLDF--NEYDDY 67
+ ++ DRI+ LP+ +L+HILS+LP KT V T L SR+W++LWK+L LDF +
Sbjct: 87 SDDDGIDRINQLPNSLLHHILSFLPTKTCVQTTPLVSRKWRNLWKNLEALDFCDSSSPQI 266
Query: 68 HRSDNRKEQLRRFVVLVNNVLH-RNRHGIRKMRLTCAHSLVDDDNFRSHTVDTWVRSVIG 126
+ DN EQ F V VN VL R +RK L+C H V D F +H++DTW+ + IG
Sbjct: 267 YEFDN-DEQFLIFSVFVNTVLTLRKSRVVRKFCLSCYH--VQLDPFYNHSIDTWINATIG 437
Query: 127 PQLEELELDLDLFSDDFDEPLDGPDFDEPLDGTDFKLPLSLFTCPNLVSL 176
P LEE L L L F+ ++PLSLF+CPNLVSL
Sbjct: 438 PNLEEFHLTL----------LTAAGFN--------RVPLSLFSCPNLVSL 533
>TC92783 similar to PIR|T49020|T49020 hypothetical protein F3C22.70 -
Arabidopsis thaliana (fragment), partial (7%)
Length = 679
Score = 109 bits (273), Expect = 7e-25
Identities = 61/132 (46%), Positives = 85/132 (64%), Gaps = 2/132 (1%)
Frame = +1
Query: 7 KRQKASEENDDRISSLPDDVLNHILSYLPIKTTVATGRL-SRQWQHLWKHLHVLDFNEYD 65
+R+K + N D I++LPD +L HILS+LP K TV T L SR+W+HLW++L V DF Y
Sbjct: 64 RRRKTEQINTDWINTLPDSLLCHILSFLPTKITVTTIPLVSRRWRHLWENLQVFDF--YL 237
Query: 66 DYHRSDNRKEQLRRFVVLVNNVLH-RNRHGIRKMRLTCAHSLVDDDNFRSHTVDTWVRSV 124
Y++ R+F VN+VL R IRKMRL+C HS VD F S+++D+W+RS
Sbjct: 238 KYNKHTINNNDFRKFAAFVNSVLSIRRSRDIRKMRLSCGHSEVDP--FFSNSIDSWIRSA 411
Query: 125 IGPQLEELELDL 136
G L+EL++ L
Sbjct: 412 TGSCLQELDITL 447
>AW690384 similar to GP|23496006|gb hypothetical protein {Plasmodium
falciparum 3D7}, partial (1%)
Length = 681
Score = 109 bits (272), Expect = 9e-25
Identities = 67/147 (45%), Positives = 90/147 (60%), Gaps = 12/147 (8%)
Frame = +3
Query: 2 VESNSKRQKASEENDD---------RISSLPDDVLNHILSYLPIKTTVATGRL-SRQWQH 51
++ +SKR+K EE DD R+SSLPD +L HILS+LP KT+V T L S ++ H
Sbjct: 204 MKESSKRRKPGEEEDDGQGSNTNKDRLSSLPDSLLCHILSFLPTKTSVCTMSLVSHRYLH 383
Query: 52 LWKHLHVLDFNEYDDYH-RSDNRKEQLRRFVVLVNNVLH-RNRHGIRKMRLTCAHSLVDD 109
LWKHL DF+ YD Y+ SD E + F + VN VL R+ IRKMRL+C S +
Sbjct: 384 LWKHLQ--DFDFYDVYYPDSDEEAENFKDFAIFVNAVLSMRSTRDIRKMRLSCGQSQL-- 551
Query: 110 DNFRSHTVDTWVRSVIGPQLEELELDL 136
D+F +VDTW+R+ + LE+L L L
Sbjct: 552 DSFXERSVDTWIRTXVXAHLEDLXLAL 632
>BG646112 weakly similar to GP|10177368|dbj contains similarity to heat shock
transcription factor HSF30~gene_id:K16L22.13, partial
(5%)
Length = 742
Score = 101 bits (252), Expect = 2e-22
Identities = 69/164 (42%), Positives = 94/164 (57%), Gaps = 4/164 (2%)
Frame = +2
Query: 17 DRISSLPDDVLNHILSYLPIKTTVATGRL-SRQWQHLWKHLHVLDFNEYDDYHRSDNRKE 75
DR+SSLPD +L HILS+LP KT+V T L SR+W+HLW+HL+V F++ + + + +K
Sbjct: 14 DRMSSLPDSLLCHILSFLPTKTSVMTTSLVSRRWRHLWEHLNVFVFDDKSNCNCRNPKK- 190
Query: 76 QLRRFVVLVNNV--LHRNRHGIRKMRLTCAHSLVDDDNFRSHTVDTWVRSVIGPQLEELE 133
R+F V++V L ++RH IRK LTC S D +F V WVR+ IGP LE+L
Sbjct: 191 -FRKFAFFVSSVLSLRKSRH-IRKFHLTCCTS--DVYSFPGECVYMWVRAAIGPHLEDLS 358
Query: 134 LDL-DLFSDDFDEPLDGPDFDEPLDGTDFKLPLSLFTCPNLVSL 176
L++ + DD LP SL C NLVSL
Sbjct: 359 LNITNCHGDDM-----------------VYLPPSLLNCTNLVSL 439
>BM815011 similar to PIR|T49178|T491 hypothetical protein T20N10.300 -
Arabidopsis thaliana, partial (4%)
Length = 628
Score = 99.0 bits (245), Expect = 1e-21
Identities = 70/165 (42%), Positives = 87/165 (52%), Gaps = 4/165 (2%)
Frame = +2
Query: 17 DRISSLPDDVLNHILSYLPIKTTVAT-GRLSRQWQHLWKHLHVLDFNEYDDYHRSDNRKE 75
DR+SSLPD VL HI+S+LP T+VAT RLS +W+HLWK L V F+ D Y
Sbjct: 5 DRLSSLPDSVLCHIMSFLPTITSVATIDRLSSRWRHLWKDLQVFRFSSDDSY-------- 160
Query: 76 QLRRFVVLVNNV--LHRNRHGIRKMRLTCAHSLVDDDNFRSHTVDTWVRSVIGPQLEELE 133
+RF VN V L R+RH IRK T + + ++ WV + IGP+LE E
Sbjct: 161 SFKRFAFFVNAVLALRRSRH-IRKFDFT-----FEFREYEVECIEMWVHAAIGPRLE--E 316
Query: 134 LDLDLFSDDFDEPLDGPDFDEPLDGTDFKLPLSLFT-CPNLVSLR 177
LDLD++ D LPLS FT C NLVSLR
Sbjct: 317 LDLDIYE------------------ADINLPLSFFTSCNNLVSLR 397
>AI974570 similar to GP|10177368|dbj contains similarity to heat shock
transcription factor HSF30~gene_id:K16L22.13, partial
(3%)
Length = 442
Score = 98.2 bits (243), Expect = 2e-21
Identities = 61/140 (43%), Positives = 81/140 (57%), Gaps = 7/140 (5%)
Frame = +2
Query: 3 ESNSKRQKASEEND---DRISSLPDDVLNHILSYLPIKTTVATGRL-SRQWQHLWKHLHV 58
E SKRQK DR+SSLP+ +L HILS+LP +T++AT L SR+W +LWKHL
Sbjct: 29 ELTSKRQKDEANTGGATDRLSSLPEPLLCHILSFLPTRTSIATLPLVSRRWNNLWKHLDA 208
Query: 59 LDFNEYDDYHRSDNR--KEQLRRFVVLVNNVLH-RNRHGIRKMRLTCAHSLVDDDNFRSH 115
F+ D + NR ++ +RF VN VL R IRK L+C S+ D F
Sbjct: 209 FHFDSNTDSDSNPNRELRKIFKRFAFFVNAVLSLRKSREIRKFHLSC--SISDVFKFSGD 382
Query: 116 TVDTWVRSVIGPQLEELELD 135
VD W+R+ IGP L+EL L+
Sbjct: 383 CVDMWLRAAIGPHLQELSLE 442
>BG581615 similar to GP|10177368|dbj contains similarity to heat shock
transcription factor HSF30~gene_id:K16L22.13, partial
(3%)
Length = 825
Score = 91.3 bits (225), Expect = 2e-19
Identities = 69/198 (34%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Frame = +3
Query: 5 NSKRQKA----SEENDDRISSLPDDVLNHILSYLPIKTTVATGRL-SRQWQHLWKHLHVL 59
+ +RQKA + DR+S LPD +L HILS+LP +T+VAT L SR+W++LWKH V
Sbjct: 267 SKRRQKACLAAATGGTDRLSGLPDSILCHILSFLPTRTSVATMNLVSRRWRNLWKHAQVF 446
Query: 60 DFNEYDDYHRSDNRKEQLRRFVVLVNNVLH-RNRHGIRKMRLTCAHSLVDDDNFRSHTVD 118
DF ++D D RF VN+VL R I+K LT + +++ V+
Sbjct: 447 DF-DFD----CDGVSADYERFRFFVNSVLALRKSRDIQKFHLTITSDCQFMSDIQNNYVE 611
Query: 119 TWVRSVIGPQLEELELDLDLFSDDFDEPLDGPDFDEPLDGTDFKLPLSLF-TCPNLVSLR 177
W+ + GP L+EL L + ++D KL SLF C NLVSL
Sbjct: 612 MWICAATGPHLQELSLIIPSYADQI-----------------VKLSPSLFMNCSNLVSLS 740
Query: 178 HVLLFFIASFSFLNVKCH 195
F + +FL H
Sbjct: 741 LDGAFEVGG*TFLQFIFH 794
>BQ136915
Length = 685
Score = 90.9 bits (224), Expect = 3e-19
Identities = 61/143 (42%), Positives = 82/143 (56%), Gaps = 7/143 (4%)
Frame = -3
Query: 54 KHLHVLDFNE-----YDDYHRSDNRKEQLRRFVVLVNNVLH--RNRHGIRKMRLTCAHSL 106
KHL VL+F+ Y++ +++ E+ R F +LVN VL RN IRK L CAHS
Sbjct: 683 KHLSVLNFSLSHFKIYEECDGTEDPTEEFRSFALLVNGVLALLRNPRAIRKFHLHCAHSH 504
Query: 107 VDDDNFRSHTVDTWVRSVIGPQLEELELDLDLFSDDFDEPLDGPDFDEPLDGTDFKLPLS 166
+DD FR+++VDTWVRSVIGP LE EL+L L+S ++ + FKLP +
Sbjct: 503 LDD-KFRAYSVDTWVRSVIGPHLE--ELNLVLYSKEYK--------------SAFKLPQT 375
Query: 167 LFTCPNLVSLRHVLLFFIASFSF 189
LFT NL+SL + F SF
Sbjct: 374 LFTSANLISLS*INYFHFLLLSF 306
>AW690594 similar to GP|23498163|emb hypothetical protein {Plasmodium
falciparum 3D7}, partial (10%)
Length = 633
Score = 89.0 bits (219), Expect = 1e-18
Identities = 51/136 (37%), Positives = 82/136 (59%), Gaps = 4/136 (2%)
Frame = +3
Query: 3 ESNSKRQKASEENDDRISSLPDDVLNHILSYLPIKTTVATGRL-SRQWQHLWKHLHVLDF 61
E ++ E+ DRIS+LPD +L HILS+LP +T+VAT L SR+W++LW+ L V +F
Sbjct: 213 EEEDDDEEGEEDEIDRISTLPDPLLLHILSFLPTRTSVATMSLASRKWRNLWEQLQVFNF 392
Query: 62 NEYDDYHRS--DNRKEQLRRFVVLVNNVLH-RNRHGIRKMRLTCAHSLVDDDNFRSHTVD 118
+ D + D ++ ++F V++VL R IRK RL+C ++ D++ F+
Sbjct: 393 KDSDPVFHTPHDCEYKKFKKFAYYVDSVLALRRSRNIRKFRLSCGYA--DENKFK----- 551
Query: 119 TWVRSVIGPQLEELEL 134
W+R+ GP L++L L
Sbjct: 552 VWIRAATGPHLQQLYL 599
>BI265577 similar to GP|10177368|dbj contains similarity to heat shock
transcription factor HSF30~gene_id:K16L22.13, partial
(3%)
Length = 346
Score = 84.7 bits (208), Expect = 2e-17
Identities = 53/104 (50%), Positives = 68/104 (64%), Gaps = 3/104 (2%)
Frame = +3
Query: 2 VESNSKRQKASEENDDRISSLPDDVLNHILSYLPIKTTVATGRL-SRQWQHLWKHLHVLD 60
+ES+ KR+KA EE DR+SSLPD +L HILS+LP +T+VAT L S +W+HL HL V D
Sbjct: 24 LESSLKRRKAEEE--DRLSSLPDSILCHILSFLPTRTSVATMTLVSXRWRHLX*HLXVFD 197
Query: 61 FNEYD-DYHRSDNRKEQLRRFVVLVNNVLH-RNRHGIRKMRLTC 102
F++YD D H D + ++F VN VL R IRK RL C
Sbjct: 198 FDDYDYDPHFYD---DSFKKFASFVNAVLTLRRSRNIRKXRLNC 320
>BG450859 weakly similar to GP|21553400|gb| unknown {Arabidopsis thaliana},
partial (11%)
Length = 549
Score = 61.2 bits (147), Expect = 3e-10
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Frame = +2
Query: 7 KRQKASEEND----DRISSLPDDVLNHILSYLPIKTTVATGRLSRQWQHLWKHLHVLDFN 62
+ + +S EN DRI +LPD++L HILS++P K T LS++W HLW+++ +LDF
Sbjct: 80 RNRMSSPENSTATVDRIGTLPDEILIHILSFVPTKQAFTTSILSKRWIHLWRYVPILDFT 259
Query: 63 EYDDYHRSDNRKEQLRRFVVLVNNVLHRNRH 93
E + R + + RF + +V+ R+RH
Sbjct: 260 ETNLEDR-----DSVIRFEEFIFSVI-RSRH 334
>TC91590 weakly similar to GP|10178235|dbj|BAB11667. gene_id:MDJ22.3~unknown
protein {Arabidopsis thaliana}, partial (9%)
Length = 712
Score = 56.2 bits (134), Expect = 9e-09
Identities = 45/165 (27%), Positives = 76/165 (45%), Gaps = 1/165 (0%)
Frame = +2
Query: 13 EENDDRISSLPDDVLNHILSYLPIKTTVATGRLSRQWQHLWKHLHVLDFNEYDDYHRSDN 72
E D IS+L + +L+ ILS++PI V+T LSR+W +WK + LDF+ D S
Sbjct: 152 EGERDMISTLHESILSQILSFIPIVDAVSTSVLSRRWVDVWKCITNLDFD--DSLLGSRK 325
Query: 73 RKEQLRRFVVLVNNVL-HRNRHGIRKMRLTCAHSLVDDDNFRSHTVDTWVRSVIGPQLEE 131
++ Q +FV V VL H I+ L+ + + + + W+ ++ ++++
Sbjct: 326 KRMQKEQFVNFVEKVLIHFTNSSIQSFSLS-----LTSHQYDASKLSEWISFILERRVQK 490
Query: 132 LELDLDLFSDDFDEPLDGPDFDEPLDGTDFKLPLSLFTCPNLVSL 176
L + ++D P D SLF C +LV L
Sbjct: 491 LHIQ---YADKVFLPSD-----------------SLFRCNSLVDL 565
>BI311381 weakly similar to PIR|T46128|T461 hypothetical protein T2J13.140 -
Arabidopsis thaliana, partial (12%)
Length = 803
Score = 55.1 bits (131), Expect = 2e-08
Identities = 27/62 (43%), Positives = 37/62 (59%)
Frame = +1
Query: 11 ASEENDDRISSLPDDVLNHILSYLPIKTTVATGRLSRQWQHLWKHLHVLDFNEYDDYHRS 70
A E +D IS+LPD +L HILS+L AT LS++W HLW+ +H L F H S
Sbjct: 85 AMAEEEDIISTLPDAILCHILSFLETNYADATSVLSKRWNHLWRSVHTLRFITQVTDHNS 264
Query: 71 DN 72
++
Sbjct: 265 NH 270
>BQ124147 similar to GP|10177836|dbj emb|CAB62440.1~gene_id:MCD7.13~similar
to unknown protein {Arabidopsis thaliana}, partial
(11%)
Length = 677
Score = 55.1 bits (131), Expect = 2e-08
Identities = 27/52 (51%), Positives = 35/52 (66%)
Frame = +1
Query: 10 KASEENDDRISSLPDDVLNHILSYLPIKTTVATGRLSRQWQHLWKHLHVLDF 61
+A EE DRIS LPDD+L HILS LP K T LS++W++LW + L+F
Sbjct: 4 EAMEEEVDRISILPDDILVHILSPLPTKQAFVTSVLSKRWKNLWCLVPALEF 159
>TC80379 similar to GP|9802755|gb|AAF99824.1| Unknown protein {Arabidopsis
thaliana}, partial (5%)
Length = 672
Score = 54.7 bits (130), Expect = 2e-08
Identities = 51/171 (29%), Positives = 77/171 (44%), Gaps = 6/171 (3%)
Frame = +2
Query: 17 DRISSLPDDVLNHILSYLPIKTTVATGRLSRQWQHLWKHLHVLDFNEYDDYHRSDNRKEQ 76
DRIS LP V++ ILS +PIK V T LS W++ W L L FN++ +
Sbjct: 194 DRISCLPGHVIDQILSLMPIKEAVRTSVLSSSWRNKWYTLPNLVFNKHCISVAASKYTSV 373
Query: 77 L-RRFVVLVNNVLHRNRHGIRKMRLTCAHSLVDDDNFRSHTVDT-----WVRSVIGPQLE 130
+ +F+ +V++VL ++ I K L+ D++N D WV + ++
Sbjct: 374 INNKFLRIVDHVLLQHSGPINKFMLS------DNENCLIRVCDVSDVHRWVLHLSRRSIK 535
Query: 131 ELELDLDLFSDDFDEPLDGPDFDEPLDGTDFKLPLSLFTCPNLVSLRHVLL 181
EL L L +K+PLSLF+C SLRH+ L
Sbjct: 536 ELLLHFWL-------------------DKRYKIPLSLFSCQ---SLRHLSL 622
>CB894052
Length = 365
Score = 54.3 bits (129), Expect = 3e-08
Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +2
Query: 109 DDNFRSHTVDTWVRSVIGPQLEELELDLDLFSDDFDEPLDGPDFDEPLDGTDFKLPLSLF 168
+D FR +VDTWVR+ IG E+L+L+L D FKLPLSLF
Sbjct: 2 NDKFRGCSVDTWVRTAIGLHPEKLDLNLVSCCSDIQL---------------FKLPLSLF 136
Query: 169 TCPNLVSLRHV-LLFFIASFSFLNVKCHC 196
T NLVSLR + L++FI F+ V HC
Sbjct: 137 TSTNLVSLR*LKLVYFIFYFAL*IVI*HC 223
>BE324624 weakly similar to GP|20042914|gb| Unknown protein {Oryza sativa
(japonica cultivar-group)}, partial (7%)
Length = 671
Score = 54.3 bits (129), Expect = 3e-08
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +1
Query: 12 SEENDDRISSLPDDVLNHILSYLPIKTTVATGRLSRQWQHLWKHLHVLDFNEYDDYHRSD 71
+EEN+D++S LP+ V+ HILS+L K V T LS +W+HLW + L +
Sbjct: 181 NEENEDKLSDLPECVILHILSFLDSKHAVQTCVLSTRWKHLWARIPTLILH--------S 336
Query: 72 NRKEQLRRFVVLVNNVL 88
+ +++F + V+N+L
Sbjct: 337 SNFSTVKKFAIFVSNIL 387
>TC79593 similar to GP|10177368|dbj|BAB10659. contains similarity to heat
shock transcription factor HSF30~gene_id:K16L22.13,
partial (6%)
Length = 713
Score = 54.3 bits (129), Expect = 3e-08
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +1
Query: 9 QKASEENDDRISSLPDDVLNHILSYLPIKTTVATGRLSRQWQHLWKHLHVLDFN 62
Q + E +DRIS+LPD +++HILS+LP K AT LS++W+ LW ++ FN
Sbjct: 520 QLSIPEEEDRISALPDSLVHHILSFLPSKDATATTVLSKRWKPLWLLELIIHFN 681
>TC82690 weakly similar to GP|9802755|gb|AAF99824.1| Unknown protein
{Arabidopsis thaliana}, partial (12%)
Length = 762
Score = 53.5 bits (127), Expect = 6e-08
Identities = 46/182 (25%), Positives = 78/182 (42%)
Frame = +1
Query: 1 MVESNSKRQKASEENDDRISSLPDDVLNHILSYLPIKTTVATGRLSRQWQHLWKHLHVLD 60
M S+ ++ DRISSLP +++ ILS LPIK V T LS +W++ W L L
Sbjct: 67 MRREQSQSPCVTDAEPDRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLV 246
Query: 61 FNEYDDYHRSDNRKEQLRRFVVLVNNVLHRNRHGIRKMRLTCAHSLVDDDNFRSHTVDTW 120
F+ S++ + ++++VL + I+K +L+ + D +D W
Sbjct: 247 FDSQCISDTSEDLLVIKSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTD------IDRW 408
Query: 121 VRSVIGPQLEELELDLDLFSDDFDEPLDGPDFDEPLDGTDFKLPLSLFTCPNLVSLRHVL 180
+ ++E L++ G +K+P LF+C L H+
Sbjct: 409 TLHLTRRPVKEFVLEI-------------------WKGQRYKIPSCLFSCQ---GLHHLE 522
Query: 181 LF 182
LF
Sbjct: 523 LF 528
>AL381150 weakly similar to GP|14028988|gb| Unknown protein {Oryza sativa},
partial (10%)
Length = 469
Score = 53.1 bits (126), Expect = 7e-08
Identities = 32/76 (42%), Positives = 44/76 (57%)
Frame = +1
Query: 7 KRQKASEENDDRISSLPDDVLNHILSYLPIKTTVATGRLSRQWQHLWKHLHVLDFNEYDD 66
KRQK S DRIS LPD VL HI+ ++ IK +V T LS++W+ LWK L L
Sbjct: 82 KRQKKS----DRISELPDHVLLHIIEFMNIKQSVQTCVLSKRWKSLWKSLANLTL----- 234
Query: 67 YHRSDNRKEQLRRFVV 82
H S+ +K + ++ V
Sbjct: 235 -HHSEKQKSYICKWFV 279
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.323 0.139 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,751,235
Number of Sequences: 36976
Number of extensions: 124988
Number of successful extensions: 939
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of query: 208
length of database: 9,014,727
effective HSP length: 92
effective length of query: 116
effective length of database: 5,612,935
effective search space: 651100460
effective search space used: 651100460
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Medicago: description of AC119419.7