
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC119414.1 + phase: 0
(489 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC78455 similar to GP|11994404|dbj|BAB02363. gb|AAC28507.1~gene_... 209 2e-54
TC78456 similar to GP|11994404|dbj|BAB02363. gb|AAC28507.1~gene_... 207 6e-54
TC83102 similar to GP|11994404|dbj|BAB02363. gb|AAC28507.1~gene_... 192 2e-49
BQ138336 similar to GP|17065360|gb Unknown protein {Arabidopsis ... 175 4e-44
TC93253 weakly similar to GP|14030731|gb|AAK53040.1 AT5g65380/MN... 174 7e-44
BQ149337 weakly similar to GP|13272459|gb unknown protein {Arabi... 166 2e-41
AW773904 weakly similar to PIR|T09556|T09 hypothetical protein L... 166 2e-41
TC92066 similar to GP|12231296|gb|AAG49032.1 ripening regulated ... 155 3e-38
BF642288 similar to GP|1495259|emb orf04 {Arabidopsis thaliana},... 144 5e-35
TC81908 similar to GP|15810018|gb|AAL06936.1 AT5g38030/F16F17_30... 143 2e-34
TC92785 weakly similar to GP|13937234|gb|AAK50109.1 AT5g38030/F1... 139 2e-33
TC91120 similar to GP|11994404|dbj|BAB02363. gb|AAC28507.1~gene_... 139 3e-33
BQ124842 weakly similar to GP|19310633|gb unknown protein {Arabi... 138 4e-33
TC80665 weakly similar to GP|19310633|gb|AAL85047.1 unknown prot... 127 7e-30
AW773745 weakly similar to GP|19310633|gb unknown protein {Arabi... 117 1e-26
BQ139895 similar to GP|12231296|gb| ripening regulated protein D... 116 2e-26
TC82524 similar to GP|19310633|gb|AAL85047.1 unknown protein {Ar... 115 5e-26
AW980583 weakly similar to GP|16797803|db hypothetical membrane ... 110 1e-24
BG589013 weakly similar to GP|20805025|db contains EST D15170(C0... 109 3e-24
BF648997 weakly similar to GP|13384114|gb aberrant lateral root ... 99 4e-21
>TC78455 similar to GP|11994404|dbj|BAB02363.
gb|AAC28507.1~gene_id:MIL23.25~strong similarity to
unknown protein {Arabidopsis thaliana}, partial (48%)
Length = 1060
Score = 209 bits (532), Expect = 2e-54
Identities = 115/275 (41%), Positives = 165/275 (59%), Gaps = 1/275 (0%)
Frame = +1
Query: 5 EASEALVEAKVPLLKNNIDEHENEVLGRRVWNESKKLWHIAGPAIFNRVSNYSMLVITQV 64
E L + VP +K + W E K L+++A P++ + NY M + TQ+
Sbjct: 139 ELERILSDTSVPFVKR---------IKLATWVEFKLLFYLAAPSVIVYLINYVMSMSTQI 291
Query: 65 FAGHLGDMELAATSIAMNLILGLDLGIMLGMSSALETLCGQAFGAKQFNMLGIYMQRSWI 124
F+GHLG++ELAA S+ N I G+MLGM SA+ETLCGQAFGAK++ MLGIY+QRS +
Sbjct: 292 FSGHLGNLELAAASLGNNGIQIFAYGLMLGMGSAVETLCGQAFGAKKYEMLGIYLQRSTV 471
Query: 125 VLFITGILLLPLFIFATPILNFFGQPQEISELAGVISMWLIPTHVTYAFFFPLYFFLQSQ 184
+L I G++L ++IF+ PIL F G+ +I+ A + LIP YA FP+ FLQ+Q
Sbjct: 472 LLTIAGLILTIIYIFSEPILIFLGESPKIASAASLFVFGLIPQIFAYAINFPIQKFLQAQ 651
Query: 185 LKNNIIGWVSLVALLVHVFLCWLVVVKFKLGVIALVASGNVAWIVLVFGFFGYAVLC-GC 243
++S L++H+ L ++V+ + LG++ +++W ++V F Y V C
Sbjct: 652 SIVAPSAYISAATLVIHLVLSYVVIYQIGLGLLGASLVLSISWWIIVIAQFVYIVKSEKC 831
Query: 244 PLTWTGFSMEAFFDLWEFAKLSAASGVMLCLEVWY 278
TW GFS +AF L EF KLSAAS VMLCLE WY
Sbjct: 832 KHTWKGFSFQAFSGLPEFFKLSAASAVMLCLETWY 936
>TC78456 similar to GP|11994404|dbj|BAB02363.
gb|AAC28507.1~gene_id:MIL23.25~strong similarity to
unknown protein {Arabidopsis thaliana}, partial (40%)
Length = 920
Score = 207 bits (528), Expect = 6e-54
Identities = 98/204 (48%), Positives = 139/204 (68%)
Frame = +1
Query: 278 YDKVLMLMTGNLHNAKKFVEALTICLTLNIWELMFPLGFLAATGVRVANELGAGNGQAAK 337
Y ++L+L+ G L + + +++L+IC T++ W M +GF AA VRV+NELGAGN ++A
Sbjct: 1 YFQILVLLAGLLPHPELALDSLSICTTVSGWTFMISVGFQAAASVRVSNELGAGNSKSAS 180
Query: 338 FASAVAVVTSIIISVFFWLLIMIFRRQIGYLFTSSELVIEEVNKLSPLLGFTILLNSVQP 397
F+ V V S II L+++ R I Y+FT E V V+ LSPLL I+LN VQP
Sbjct: 181 FSVVVVTVISFIICAIIALVVLALRDVISYVFTEGEEVAAAVSNLSPLLALAIVLNGVQP 360
Query: 398 VLSGVAIGSGWQKYVAYIDLGCYYLIGMPLGFLMGFVFQFGVEGLWAGLVCGGPAIQTLI 457
VLSGVA+G GWQ +VAY+++GCYY +G+PLG ++GF F+FG +G+W G++ GG +QT+I
Sbjct: 361 VLSGVAVGCGWQTFVAYVNVGCYYGLGIPLGAVLGFYFKFGAKGIWLGML-GGTVLQTII 537
Query: 458 LAWVTIRCDWNKEAERAKLHLSKW 481
L WVT R DWN E + L+KW
Sbjct: 538 LMWVTFRTDWNNEVVESNKRLNKW 609
>TC83102 similar to GP|11994404|dbj|BAB02363.
gb|AAC28507.1~gene_id:MIL23.25~strong similarity to
unknown protein {Arabidopsis thaliana}, partial (36%)
Length = 1048
Score = 192 bits (488), Expect = 2e-49
Identities = 93/186 (50%), Positives = 127/186 (68%), Gaps = 3/186 (1%)
Frame = +3
Query: 299 LTIC---LTLNIWELMFPLGFLAATGVRVANELGAGNGQAAKFASAVAVVTSIIISVFFW 355
+TIC T++ W M +GF AA VRV+NELGA N ++A F+ V V S IISV
Sbjct: 192 ITICDCSTTVSGWVFMISVGFNAAASVRVSNELGARNPKSASFSVKVVTVISFIISVIAA 371
Query: 356 LLIMIFRRQIGYLFTSSELVIEEVNKLSPLLGFTILLNSVQPVLSGVAIGSGWQKYVAYI 415
L+++ R I Y+FT E+V V+ L PLL +++LN +QPVLSGVA+G GWQ +VAY+
Sbjct: 372 LIVLALRDVISYVFTEGEVVAAAVSDLCPLLSLSLVLNGIQPVLSGVAVGCGWQAFVAYV 551
Query: 416 DLGCYYLIGMPLGFLMGFVFQFGVEGLWAGLVCGGPAIQTLILAWVTIRCDWNKEAERAK 475
++GCYY+ G+PLG +GF F FG +G+W G++ GG +QT+IL WVT R DWNKE + A
Sbjct: 552 NVGCYYIAGIPLGAGLGFYFNFGAKGIWLGML-GGTTMQTIILMWVTFRTDWNKEVKEAA 728
Query: 476 LHLSKW 481
L+KW
Sbjct: 729 KRLNKW 746
>BQ138336 similar to GP|17065360|gb Unknown protein {Arabidopsis thaliana},
partial (20%)
Length = 536
Score = 175 bits (443), Expect = 4e-44
Identities = 81/161 (50%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
Frame = +1
Query: 17 LLKNNIDEHENEVL--GRRVWNESKKLWHIAGPAIFNRVSNYSMLVITQVFAGHLGDMEL 74
LLK +E+E E L G+RVWNE+K +W +A PAIF R S + + +I+Q F GH+G EL
Sbjct: 40 LLKKPEEENEQEELSLGKRVWNETKLMWVVAAPAIFTRFSTFGIQIISQAFVGHIGSREL 219
Query: 75 AATSIAMNLILGLDLGIMLGMSSALETLCGQAFGAKQFNMLGIYMQRSWIVLFITGILLL 134
AA ++ +++ GI+LGM++AL TLCGQA+GAK++ M+G+Y+QRSWIVLF+T ++LL
Sbjct: 220 AAFALVFTVLIRFANGILLGMATALSTLCGQAYGAKEYGMMGVYLQRSWIVLFLTALVLL 399
Query: 135 PLFIFATPILNFFGQPQEISELAGVISMWLIPTHVTYAFFF 175
P+F+F TPIL GQ + IS +AG IS+W IP + F
Sbjct: 400 PVFVFTTPILTLLGQDESISXVAGSISLWSIPIMXAFIXSF 522
>TC93253 weakly similar to GP|14030731|gb|AAK53040.1 AT5g65380/MNA5_11
{Arabidopsis thaliana}, partial (25%)
Length = 633
Score = 174 bits (441), Expect = 7e-44
Identities = 80/123 (65%), Positives = 99/123 (80%)
Frame = +2
Query: 359 MIFRRQIGYLFTSSELVIEEVNKLSPLLGFTILLNSVQPVLSGVAIGSGWQKYVAYIDLG 418
MIF RQ Y+FT+S V+E VN +S LL TILLNSVQP+LSGVA+GSGWQ +VAY+++G
Sbjct: 2 MIFHRQFAYIFTTSPPVLEAVNDMSILLAVTILLNSVQPILSGVAVGSGWQVFVAYVNIG 181
Query: 419 CYYLIGMPLGFLMGFVFQFGVEGLWAGLVCGGPAIQTLILAWVTIRCDWNKEAERAKLHL 478
CYYLIG+PLG LMG+VF GVEG+W G++ GG AIQTLIL VT RCDW EA++A+ +
Sbjct: 182 CYYLIGLPLGILMGWVFNTGVEGIWGGMIFGGTAIQTLILIIVTARCDWENEAKKARSSV 361
Query: 479 SKW 481
SKW
Sbjct: 362 SKW 370
>BQ149337 weakly similar to GP|13272459|gb unknown protein {Arabidopsis
thaliana}, partial (21%)
Length = 622
Score = 166 bits (420), Expect = 2e-41
Identities = 78/174 (44%), Positives = 122/174 (69%)
Frame = +2
Query: 316 FLAATGVRVANELGAGNGQAAKFASAVAVVTSIIISVFFWLLIMIFRRQIGYLFTSSELV 375
F AA VRVANELG G+ + AKF+ + +TS I F+L+ + ++++ Y+FTS V
Sbjct: 2 FFAAASVRVANELGRGSSRDAKFSIVINALTSFAIGFIFFLIFLFLKKKLSYIFTSDSDV 181
Query: 376 IEEVNKLSPLLGFTILLNSVQPVLSGVAIGSGWQKYVAYIDLGCYYLIGMPLGFLMGFVF 435
V LS L ++LLNSVQPVLSGV++G+GWQ VAY+++GCYYLIG+P+G ++G V+
Sbjct: 182 ANAVGDLSFWLALSMLLNSVQPVLSGVSVGAGWQSIVAYVNIGCYYLIGIPVGVVIGVVY 361
Query: 436 QFGVEGLWAGLVCGGPAIQTLILAWVTIRCDWNKEAERAKLHLSKWGAPNHAQK 489
G++G+W G++ G +QT++L +T + DW+K+ E A+ +++W A N+AQ+
Sbjct: 362 NLGIKGIWIGMLF-GTFVQTIMLIIITTKTDWDKQVEIAQWRVNRW-AINNAQE 517
>AW773904 weakly similar to PIR|T09556|T09 hypothetical protein L73G19.20 -
Arabidopsis thaliana, partial (28%)
Length = 642
Score = 166 bits (420), Expect = 2e-41
Identities = 83/192 (43%), Positives = 127/192 (65%)
Frame = +2
Query: 34 VWNESKKLWHIAGPAIFNRVSNYSMLVITQVFAGHLGDMELAATSIAMNLILGLDLGIML 93
+WNE K+W IA P + + + ++AGH+GD++L++ S+ ++I+ + I+
Sbjct: 65 LWNEGLKIWKIAIPVALSLLFQNLIGSSNFIYAGHIGDIQLSSYSVYQSVIITIYFSILY 244
Query: 94 GMSSALETLCGQAFGAKQFNMLGIYMQRSWIVLFITGILLLPLFIFATPILNFFGQPQEI 153
GMS+AL TLCGQA+GA +F GIY+QRSWIVLF T ILLLP+ ++ATPIL GQ +EI
Sbjct: 245 GMSNALATLCGQAYGAGKFQNAGIYLQRSWIVLFTTCILLLPILLYATPILKLLGQEKEI 424
Query: 154 SELAGVISMWLIPTHVTYAFFFPLYFFLQSQLKNNIIGWVSLVALLVHVFLCWLVVVKFK 213
++LAG ++ LIP ++A PL FLQ+Q K N+I ++++V LL+ L ++ + F
Sbjct: 425 ADLAGKYAILLIPYMFSFAVNLPLVKFLQAQSKVNVIMYIAMVTLLIQNGLLYIFITVFD 604
Query: 214 LGVIALVASGNV 225
GVI L + N+
Sbjct: 605 WGVIGLAMASNI 640
>TC92066 similar to GP|12231296|gb|AAG49032.1 ripening regulated protein
DDTFR18 {Lycopersicon esculentum}, partial (34%)
Length = 668
Score = 155 bits (393), Expect = 3e-38
Identities = 86/189 (45%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Frame = +3
Query: 1 MSKVEASEALVEAKVPLLKNNIDEHENEVLGRRVWNESKKLWHIAGPAIFNRVSNYSMLV 60
M E + L E KVPLL N +E E + L R+VW ESKKLWHI GPAIF+R+++Y MLV
Sbjct: 105 MPSKELASPLGETKVPLLSRNEEEEEEQDLTRKVWIESKKLWHIVGPAIFSRIASYMMLV 284
Query: 61 ITQVFAGHLGDMELAATSIAMNLILGLDLGIMLGMSSALETLCGQAFGAK---QFNMLGI 117
ITQ FAGHLGD+ELAA SIA N+++G D G++LGM+ + + +K +
Sbjct: 285 ITQSFAGHLGDLELAAISIANNVVVGFDFGLLLGMAKCITNFMWTSIWSKTILHVRSIHA 464
Query: 118 YMQRSWIVLFITGILLLPLFIFATPILNFFGQPQEISELAGVISMWLIPTHVTYAFFFPL 177
+ S I + + LP F + G + +S L+G +SMW+IP H +AF FPL
Sbjct: 465 TIMDSTIHMSDFSLTNLP---FCNTSVKTIGPTRGLSVLSGQVSMWMIPLHFAFAFKFPL 635
Query: 178 YFFLQSQLK 186
FLQSQLK
Sbjct: 636 NRFLQSQLK 662
>BF642288 similar to GP|1495259|emb orf04 {Arabidopsis thaliana}, partial
(29%)
Length = 654
Score = 144 bits (362), Expect(2) = 5e-35
Identities = 69/118 (58%), Positives = 89/118 (74%)
Frame = +3
Query: 32 RRVWNESKKLWHIAGPAIFNRVSNYSMLVITQVFAGHLGDMELAATSIAMNLILGLDLGI 91
R NESKKLW++AGPAIF +S YS+ +TQVFAG +G ++LAA S+ ++I G LGI
Sbjct: 252 REFLNESKKLWYLAGPAIFTSISQYSLGAVTQVFAGQVGTLQLAAVSVENSVIAGFCLGI 431
Query: 92 MLGMSSALETLCGQAFGAKQFNMLGIYMQRSWIVLFITGILLLPLFIFATPILNFFGQ 149
+GM SALETLCGQAFGA + +MLGIYM RSW++L T I+L L+IFA+P+L GQ
Sbjct: 432 TMGMGSALETLCGQAFGAGKLDMLGIYMXRSWLILNATAIILCFLYIFASPLLKLIGQ 605
Score = 22.3 bits (46), Expect(2) = 5e-35
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 153 ISELAGVISMWLI 165
ISE AGV ++W+I
Sbjct: 616 ISEAAGVFALWMI 654
>TC81908 similar to GP|15810018|gb|AAL06936.1 AT5g38030/F16F17_30
{Arabidopsis thaliana}, partial (41%)
Length = 499
Score = 143 bits (360), Expect = 2e-34
Identities = 70/117 (59%), Positives = 87/117 (73%)
Frame = +2
Query: 37 ESKKLWHIAGPAIFNRVSNYSMLVITQVFAGHLGDMELAATSIAMNLILGLDLGIMLGMS 96
ESKKLW++AGPAIF+ VS YS+ +TQ+FAGH+ ++LAA S+ +LI G G+MLGM
Sbjct: 149 ESKKLWYLAGPAIFSFVSKYSLGAVTQIFAGHVSTIDLAAVSVENSLIAGFSFGLMLGMG 328
Query: 97 SALETLCGQAFGAKQFNMLGIYMQRSWIVLFITGILLLPLFIFATPILNFFGQPQEI 153
SALETLCGQA GA + +MLGIYMQRSW++LF L L+IFA IL F GQ EI
Sbjct: 329 SALETLCGQAVGAGKLDMLGIYMQRSWVILFSMAFPLCLLYIFAGSILKFIGQTTEI 499
>TC92785 weakly similar to GP|13937234|gb|AAK50109.1 AT5g38030/F16F17_30
{Arabidopsis thaliana}, partial (30%)
Length = 533
Score = 139 bits (350), Expect = 2e-33
Identities = 64/151 (42%), Positives = 102/151 (67%)
Frame = +1
Query: 334 QAAKFASAVAVVTSIIISVFFWLLIMIFRRQIGYLFTSSELVIEEVNKLSPLLGFTILLN 393
+ A+F+ VAV+TSI+I + L+++I R + FT+ + V + V L+PLL +++N
Sbjct: 4 RTARFSLVVAVITSILIGLLLALVLIISRDKYPAYFTTDKEVQDLVKDLTPLLALCVVIN 183
Query: 394 SVQPVLSGVAIGSGWQKYVAYIDLGCYYLIGMPLGFLMGFVFQFGVEGLWAGLVCGGPAI 453
+VQPVLSGVAIG+GWQ VAY+++ CYYL G+P+G ++G+ GV+G+W G++ G +
Sbjct: 184 NVQPVLSGVAIGAGWQAAVAYVNIACYYLFGIPVGLILGYKVNLGVKGIWCGMM-SGTIL 360
Query: 454 QTLILAWVTIRCDWNKEAERAKLHLSKWGAP 484
QT +L + + +WNKEA A+ + WG P
Sbjct: 361 QTCVLLIMVYKTNWNKEASLAEDRIRNWGGP 453
>TC91120 similar to GP|11994404|dbj|BAB02363.
gb|AAC28507.1~gene_id:MIL23.25~strong similarity to
unknown protein {Arabidopsis thaliana}, partial (35%)
Length = 665
Score = 139 bits (349), Expect = 3e-33
Identities = 72/155 (46%), Positives = 100/155 (64%)
Frame = +3
Query: 30 LGRRVWNESKKLWHIAGPAIFNRVSNYSMLVITQVFAGHLGDMELAATSIAMNLILGLDL 89
+G W E + L+ +A PA+F + NY M + TQ+F+GHLG++ELAA S+ I
Sbjct: 159 IGSATWIELRLLFLLAAPAVFVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQIFAY 338
Query: 90 GIMLGMSSALETLCGQAFGAKQFNMLGIYMQRSWIVLFITGILLLPLFIFATPILNFFGQ 149
G+MLGM SA+ETLCGQA+GA+++ MLG Y+QRS I+L ITG L +++ + PIL F GQ
Sbjct: 339 GLMLGMGSAVETLCGQAYGAEKYGMLGTYLQRSTILLTITGFFLTIIYVLSEPILVFIGQ 518
Query: 150 PQEISELAGVISMWLIPTHVTYAFFFPLYFFLQSQ 184
I+ A + LIP YA FP+ FLQ+Q
Sbjct: 519 SPRIASAAALFVYGLIPQIFAYAVNFPIQKFLQAQ 623
>BQ124842 weakly similar to GP|19310633|gb unknown protein {Arabidopsis
thaliana}, partial (31%)
Length = 706
Score = 138 bits (348), Expect = 4e-33
Identities = 78/233 (33%), Positives = 123/233 (52%)
Frame = +2
Query: 243 CPLTWTGFSMEAFFDLWEFAKLSAASGVMLCLEVWYDKVLMLMTGNLHNAKKFVEALTIC 302
C +T FF W F L+VW ++++LM+G L N L+IC
Sbjct: 29 CL*IYTKLDFSEFF*CWIFCD---------SLKVWTFELMVLMSGLLPNPVIETSVLSIC 181
Query: 303 LTLNIWELMFPLGFLAATGVRVANELGAGNGQAAKFASAVAVVTSIIISVFFWLLIMIFR 362
L M P G A +RV+NELG GN A A VA+ S I ++F L +++ R
Sbjct: 182 LNTFGLAWMIPFGCSCAVSIRVSNELGGGNPNGASLAVRVALSISFIAALFMVLSMILAR 361
Query: 363 RQIGYLFTSSELVIEEVNKLSPLLGFTILLNSVQPVLSGVAIGSGWQKYVAYIDLGCYYL 422
+ G+L++ + VI V+ + P+L + L+++Q LSGV G GWQK AY++LG +Y+
Sbjct: 362 KVWGHLYSDDKQVIRYVSAMMPILAISSFLDAIQSTLSGVLAGCGWQKIGAYVNLGSFYV 541
Query: 423 IGMPLGFLMGFVFQFGVEGLWAGLVCGGPAIQTLILAWVTIRCDWNKEAERAK 475
+G+P ++ F GLW G++ +QT + TIR +W +EA++A+
Sbjct: 542 VGVPCAVVLAFFVHMHAMGLWLGII-SAFIVQTSLYIIFTIRSNWEEEAKKAQ 697
>TC80665 weakly similar to GP|19310633|gb|AAL85047.1 unknown protein
{Arabidopsis thaliana}, partial (31%)
Length = 894
Score = 127 bits (320), Expect = 7e-30
Identities = 64/149 (42%), Positives = 96/149 (63%)
Frame = +3
Query: 326 NELGAGNGQAAKFASAVAVVTSIIISVFFWLLIMIFRRQIGYLFTSSELVIEEVNKLSPL 385
NELGAGN +AA+ A V VV +II S+ +I++ R GY +++ E V++ V + P+
Sbjct: 3 NELGAGNPRAARLAVYVVVVIAIIESIVVGAVIILIRNIWGYAYSNEEEVVKYVAIMLPI 182
Query: 386 LGFTILLNSVQPVLSGVAIGSGWQKYVAYIDLGCYYLIGMPLGFLMGFVFQFGVEGLWAG 445
+ + L+ +Q VLSG A G GWQK AY++LG YYL+G+P ++ FV G +GLW G
Sbjct: 183 IAVSNFLDGIQSVLSGTARGVGWQKIGAYVNLGSYYLVGIPAAVVLAFVLHVGGKGLWLG 362
Query: 446 LVCGGPAIQTLILAWVTIRCDWNKEAERA 474
++C +Q + L +TIR DW KEA++A
Sbjct: 363 IIC-ALFVQVVSLTIITIRTDWEKEAKKA 446
>AW773745 weakly similar to GP|19310633|gb unknown protein {Arabidopsis
thaliana}, partial (36%)
Length = 614
Score = 117 bits (293), Expect = 1e-26
Identities = 73/190 (38%), Positives = 104/190 (54%), Gaps = 3/190 (1%)
Frame = +3
Query: 91 IMLGMSSALETLCGQAFGAKQFNMLGIYMQRSWIVLFITGILLLPLFIFATPILNFFGQP 150
+++GM+SAL+TLCGQ++GAKQ+ MLGI+MQR+ +L I I L ++ IL F GQ
Sbjct: 36 LLVGMASALDTLCGQSYGAKQYRMLGIHMQRAMFILMIVAIPLAIIWANTRSILIFLGQD 215
Query: 151 QEISELAGVISMWLIPTHVTYAFFFPLYFFLQSQLKNNIIGWVSLVALLVHVFLCWLVVV 210
EIS AG + ++P+ Y L FLQ+Q + S V L+H+ LCW +V
Sbjct: 216 HEISMEAGNYAKLMVPSLFAYGLLQCLNRFLQTQNIVFPMMLSSAVTTLLHLPLCWYMVY 395
Query: 211 KFKLGV-IALVASGNVAWIVLVFGFFGYAVLCGCPLTWTGFSMEAFF--DLWEFAKLSAA 267
K G A +AS W+ ++ C TW GFS EA ++ F KL+
Sbjct: 396 KSGFGSGGAAIASSISYWVNVIILSLYVKFSPSCQKTWNGFSREALAPNNIPIFLKLAIP 575
Query: 268 SGVMLCLEVW 277
S M+CLE+W
Sbjct: 576 SAAMVCLEIW 605
>BQ139895 similar to GP|12231296|gb| ripening regulated protein DDTFR18
{Lycopersicon esculentum}, partial (16%)
Length = 392
Score = 116 bits (290), Expect = 2e-26
Identities = 54/110 (49%), Positives = 84/110 (76%), Gaps = 5/110 (4%)
Frame = +2
Query: 5 EASEALVEAKVPLLKNNIDEHENE-----VLGRRVWNESKKLWHIAGPAIFNRVSNYSML 59
+A L+++ + + I++H++E G+++W E+ KLWHI GP+IF+RV++++M
Sbjct: 62 DADHNLIQSLLSKEISTINKHQHEDDDEQEFGKKLWFETXKLWHIVGPSIFSRVASFTMN 241
Query: 60 VITQVFAGHLGDMELAATSIAMNLILGLDLGIMLGMSSALETLCGQAFGA 109
V+TQ FAGHLGD++LA+ SIA +I+G + G++LGM+SALETLCGQAFGA
Sbjct: 242 VVTQAFAGHLGDVQLASISIANTVIVGFNFGLLLGMASALETLCGQAFGA 391
>TC82524 similar to GP|19310633|gb|AAL85047.1 unknown protein {Arabidopsis
thaliana}, partial (36%)
Length = 712
Score = 115 bits (287), Expect = 5e-26
Identities = 68/209 (32%), Positives = 114/209 (54%)
Frame = +2
Query: 19 KNNIDEHENEVLGRRVWNESKKLWHIAGPAIFNRVSNYSMLVITQVFAGHLGDMELAATS 78
+NN E + L V K+LW ++GP I + N+ + +I+ +F GHLG++ L+ S
Sbjct: 95 QNNKKEEDRRELVEEV---KKQLW-LSGPLISVTLLNFGINLISVMFVGHLGELPLSGAS 262
Query: 79 IAMNLILGLDLGIMLGMSSALETLCGQAFGAKQFNMLGIYMQRSWIVLFITGILLLPLFI 138
+A + ++ GM+SAL+T CGQ++GAKQ+ MLG++MQR+ +L + I L ++
Sbjct: 263 MATSFASVTGFSLLQGMASALDTFCGQSYGAKQYRMLGVHMQRAMFILMVVAIPLAVIWA 442
Query: 139 FATPILNFFGQPQEISELAGVISMWLIPTHVTYAFFFPLYFFLQSQLKNNIIGWVSLVAL 198
IL GQ EIS AG + ++P Y L FLQ+Q + + S +
Sbjct: 443 NTRSILLVLGQDPEISIEAGSYAKLMVPCLFAYGLLQCLNRFLQTQNIVFPMMFSSAMTT 622
Query: 199 LVHVFLCWLVVVKFKLGVIALVASGNVAW 227
L+H+ +CW +V K LG + ++++
Sbjct: 623 LLHLPICWFMVYKSGLGSRXAAIANSISY 709
>AW980583 weakly similar to GP|16797803|db hypothetical membrane protein-1
{Marchantia polymorpha}, partial (21%)
Length = 631
Score = 110 bits (275), Expect = 1e-24
Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 1/204 (0%)
Frame = +3
Query: 163 WLIPTHVTYAFFFPLYFFLQSQLKNNIIGWVSLVALLVHVFLCWLVVVKFKLGVI-ALVA 221
+LIP + + FLQ+Q + S + L+H CW+ +VK + G+ A +A
Sbjct: 15 YLIPNILASGILKCIVKFLQTQNIVFPLLVASGITSLLHCLNCWIWIVKLRHGIKGAAIA 194
Query: 222 SGNVAWIVLVFGFFGYAVLCGCPLTWTGFSMEAFFDLWEFAKLSAASGVMLCLEVWYDKV 281
+ W V F C TWTGFS E+ ++ +F +++ S +M+CLE W ++
Sbjct: 195 TCMSNWTYTVLLVFYIKFSSSCKSTWTGFSRESLHNIPQFLRIAFPSAIMVCLESWMYEI 374
Query: 282 LMLMTGNLHNAKKFVEALTICLTLNIWELMFPLGFLAATGVRVANELGAGNGQAAKFASA 341
++L++G L N K L IC+ + M GF A +RV+NELGAGN +AA A
Sbjct: 375 MVLLSGTLPNPKLQTSVLAICMNIASVVWMLSSGFTGAASIRVSNELGAGNPRAAHLAVC 554
Query: 342 VAVVTSIIISVFFWLLIMIFRRQI 365
V VV + I FF +MI R I
Sbjct: 555 VVVVLN-ITEAFFVGTVMILLRNI 623
>BG589013 weakly similar to GP|20805025|db contains EST D15170(C0202)~unknown
protein {Oryza sativa (japonica cultivar-group)},
partial (42%)
Length = 786
Score = 109 bits (272), Expect = 3e-24
Identities = 74/232 (31%), Positives = 114/232 (48%), Gaps = 1/232 (0%)
Frame = +1
Query: 112 FNMLGIYMQRSWIVLFITGILLLPLFIFATPILNFFGQPQEISELAGVISMWLIPTHVTY 171
+ LG Y + + L + + ++IF IL FF Q +S +A ++LIP Y
Sbjct: 1 YGKLGNYTCCAILTLTVVCFPISLVWIFTDKILMFFSQDPGMSHVAREYCIYLIPALFGY 180
Query: 172 AFFFPLYFFLQSQLKNNIIGWVSLVALLVHVFLCWLVVVKFKLGVI-ALVASGNVAWIVL 230
A L + Q+Q + + S+ AL +H+ +CW++V K LG I A +A G W+ +
Sbjct: 181 ALLQALIRYFQTQGMIFPMVFSSVSALFLHIPICWILVFKLGLGHIGAALAIGISYWLNV 360
Query: 231 VFGFFGYAVLCGCPLTWTGFSMEAFFDLWEFAKLSAASGVMLCLEVWYDKVLMLMTGNLH 290
++ + C T FS A +L EF K + SG+M C E W ++L+L+ G L
Sbjct: 361 IWLWVYIKYSPSCEKTKIVFSTHALHNLPEFCKYAIPSGLMFCFEWWSFEILILIAGLLP 540
Query: 291 NAKKFVEALTICLTLNIWELMFPLGFLAATGVRVANELGAGNGQAAKFASAV 342
N + L++CL P A+ RV+NELGAGN + AK A V
Sbjct: 541 NPQLETSVLSVCLNTTSLHFFIPYAIGASASTRVSNELGAGNPKTAKGAVRV 696
>BF648997 weakly similar to GP|13384114|gb aberrant lateral root formation 5
{Arabidopsis thaliana}, partial (27%)
Length = 536
Score = 99.0 bits (245), Expect = 4e-21
Identities = 60/173 (34%), Positives = 95/173 (54%), Gaps = 1/173 (0%)
Frame = +3
Query: 64 VFAGHLGDMELAATSIAMNLILGLDLGIMLGMSSALETLCGQAFGAKQFNMLGIYMQRSW 123
+ GHLG+++LA ++A + + +M+G+S ALETLCGQ FGAK+++MLGIY+Q S
Sbjct: 9 MLVGHLGELQLAGATLANSWFSVTGVAVMVGLSGALETLCGQGFGAKEYHMLGIYLQGSC 188
Query: 124 IVLFITGILLLPLFIFATPILNFFGQPQEISELAGVISMWLIPTHVTYAFFFPLYFFLQS 183
I+ FI I + ++ + IL Q Q+I+ A + +LIP Y+ L FLQ+
Sbjct: 189 IISFIFSIFISIIWFYTEHILVLLHQSQDIARTAALYMKFLIPGLFAYSILQNLLRFLQT 368
Query: 184 QLKNNIIGWVSLVALLVHVFLCWLVVVKFKLGVI-ALVASGNVAWIVLVFGFF 235
Q + +S + L+HV + + V L I VA+ WI ++ F
Sbjct: 369 QSVVMPLVILSAIPTLIHVGIAYGFVQWTGLNFIGGPVATSIXLWISMIMLXF 527
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.328 0.142 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,601,978
Number of Sequences: 36976
Number of extensions: 285107
Number of successful extensions: 2252
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 2210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2235
length of query: 489
length of database: 9,014,727
effective HSP length: 100
effective length of query: 389
effective length of database: 5,317,127
effective search space: 2068362403
effective search space used: 2068362403
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.7 bits)
Medicago: description of AC119414.1