BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC119410.2 - phase: 1 /pseudo
(1273 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC92097 similar to GP|22553016|emb|CAD44995. multidrug-resistanc... 629 e-180
TC86470 similar to PIR|F84919|F84919 glutathione-conjugate trans... 560 e-179
TC88559 similar to GP|10172595|dbj|BAB01399. multidrug resistanc... 254 e-115
TC87490 similar to PIR|T52080|T52080 multi resistance protein [i... 342 4e-94
TC92328 similar to PIR|T52080|T52080 multi resistance protein [i... 337 2e-92
TC78391 similar to PIR|F84919|F84919 glutathione-conjugate trans... 286 2e-88
BG449884 similar to GP|10172595|d multidrug resistance-associate... 277 2e-74
TC78392 similar to PIR|F84919|F84919 glutathione-conjugate trans... 164 4e-69
CB891756 similar to GP|22553016|e multidrug-resistance related p... 256 4e-68
BE943010 similar to GP|6634763|gb Similar to gb|AF008124 Arabido... 215 8e-56
TC91451 similar to GP|22553016|emb|CAD44995. multidrug-resistanc... 214 2e-55
BQ141339 similar to PIR|T47796|T4 ABC transporter-like protein -... 188 1e-49
CB894116 similar to PIR|T47796|T4 ABC transporter-like protein -... 179 8e-45
TC80066 similar to PIR|T50518|T50518 ABC transporter-like protei... 176 5e-44
AW775084 similar to PIR|T47796|T4 ABC transporter-like protein -... 158 1e-38
TC84873 similar to GP|2909781|gb|AAC04245.1| MgATP-energized glu... 144 2e-34
TC79335 similar to GP|14715462|dbj|BAB62040. CjMDR1 {Coptis japo... 139 7e-33
TC78393 similar to PIR|T48059|T48059 ABC transporter-like protei... 135 1e-31
TC78215 similar to GP|10177549|dbj|BAB10828. ABC transporter-lik... 135 1e-31
TC77937 similar to GP|14715462|dbj|BAB62040. CjMDR1 {Coptis japo... 134 2e-31
>TC92097 similar to GP|22553016|emb|CAD44995. multidrug-resistance related
protein {Arabidopsis thaliana}, partial (25%)
Length = 1011
Score = 629 bits (1623), Expect = e-180
Identities = 319/336 (94%), Positives = 326/336 (96%)
Frame = +2
Query: 904 KNYLKLVDTDASLFFHSNVAMEWLVLRIEALLNLTVITAALLLILLPQRYLSPGRVGLSL 963
KNYLKLVDTDASLFFHSN AMEW+VLRIEAL NLTVITAALLLILLPQ Y+SPG VGLSL
Sbjct: 2 KNYLKLVDTDASLFFHSNGAMEWVVLRIEALQNLTVITAALLLILLPQGYVSPGLVGLSL 181
Query: 964 SYALTLNGAQIFWTRWFSNLSNYIISVERIKQFIHIPAEPPAIVDNNRPPSSWPSKGKID 1023
SYA TL GAQIFW+RWFSNLSN+IISVERI QFIHIPAEPPAIVDNNRPPSSWPSKGKID
Sbjct: 182 SYAFTLTGAQIFWSRWFSNLSNHIISVERINQFIHIPAEPPAIVDNNRPPSSWPSKGKID 361
Query: 1024 LQGLEVRYRPNAPLVLKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILID 1083
LQGLE+RYRPN+PLVLKGI CTFK GSRVGVVGRTGSGKSTLISALFRLVEPSRGDILID
Sbjct: 362 LQGLEIRYRPNSPLVLKGIICTFKEGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILID 541
Query: 1084 GINICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISK 1143
GINICS+GLKDLR KLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISK
Sbjct: 542 GINICSIGLKDLRTKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISK 721
Query: 1144 LPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQ 1203
LPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQ
Sbjct: 722 LPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQ 901
Query: 1204 EFEECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDE 1239
EFEECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDE
Sbjct: 902 EFEECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDE 1009
>TC86470 similar to PIR|F84919|F84919 glutathione-conjugate transporter AtMRP4
[imported] - Arabidopsis thaliana, partial (57%)
Length = 3175
Score = 560 bits (1444), Expect(3) = e-179
Identities = 301/693 (43%), Positives = 443/693 (63%), Gaps = 22/693 (3%)
Frame = +1
Query: 587 CVMTALRDKTVILVTHQVEFLSEVDTIL---DGKVIQSGSYENLLKSGTAFELLVSAHKV 643
CV AL+ KT++LVTHQV+FL VD I+ DG ++QSG Y +LL SG F +LV+AH+
Sbjct: 655 CVRGALKGKTIVLVTHQVDFLHNVDRIVVMRDGMIVQSGRYNDLLDSGLDFGVLVAAHET 834
Query: 644 TINDLNQNSEVLSNPQD----SHGFYLTKNQSEGEISSIQGSIGAQ----LTQEEEKVIG 695
++ + Q + V + S + ++ GE +S+ A+ L +EEE+ G
Sbjct: 835 SMELVEQGAAVPGENSNKLMISKSASINNRETNGESNSLDQPNSAKGSSKLVKEEERETG 1014
Query: 696 NVGWKPLWDYINYSNGTLMSCLVILGQCCFLALQTSSNFWLA--TAIEIPKVTDTTL-IG 752
V + Y + G V+ + A +S++WLA T++E +V + + I
Sbjct: 1015 KVSFNIYKRYCTEAFGWAGILAVLFLSVLWQASMMASDYWLAFETSVERAEVFNPVVFIS 1194
Query: 753 VYALLSISSTSFVYVRSYFAALLGLKASTAFFSSFTTSIFNAPMLFFDSTP-------AS 805
+YA ++I S + VRSY + GLK + FF+ TSI +APM F+D+TP AS
Sbjct: 1195 IYAAITIVSVILIVVRSYSVTIFGLKTAQIFFNQILTSILHAPMSFYDTTPSGRILSRAS 1374
Query: 806 SDLSILDFDIPYSLTCVAIVAIEVLVMIFVIASVTWQVLIVAVPAMVALIFIQKYYQATA 865
+D + +D IP + V + I V+ ++ + +W + +P + I+ + Y+ +T+
Sbjct: 1375 TDQTNVDIFIPLFINFVVAMYITVISIVIITCQNSWPTAFLLIPLVWLNIWYRGYFLSTS 1554
Query: 866 RELIRINGTTKAPVMNFAAETHLGVVTVRAFNMVDRFFKNYLKLVDTDASLFFHSNVAME 925
REL R++ TKAPV+ +E+ GV+TVRAF F K V+++ + FH+ +
Sbjct: 1555 RELTRLDSITKAPVIVHFSESISGVMTVRAFRKQKEFRLENFKRVNSNLRMDFHNYSSNA 1734
Query: 926 WLVLRIEALLNLTVITAALLLILLPQRYLSPGRVGLSLSYALTLNGAQIFWTRWFSN-LS 984
WL R+E L +L +AL +ILLP + P VGLSLSY L+LN +FW + S +
Sbjct: 1735 WLGFRLELLGSLVFCLSALFMILLPSNIIKPENVGLSLSYGLSLNSV-LFWAIYMSCFIE 1911
Query: 985 NYIISVERIKQFIHIPAEPPAIVDNNRPPSSWPSKGKIDLQGLEVRYRPNAPLVLKGITC 1044
N ++SVERIKQF +IP+E + + PP +WP +G +D++ L+VRYRPN PLVLKGIT
Sbjct: 1912 NKMVSVERIKQFSNIPSEAAWNIKDRSPPPNWPGQGHVDIKDLQVRYRPNTPLVLKGITL 2091
Query: 1045 TFKGGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLKDLRMKLSIIPQ 1104
+ GG +VGVVGRTGSGKSTLI FRLVEP+ G I+IDGI+IC++GL DLR + IIPQ
Sbjct: 2092 SISGGEKVGVVGRTGSGKSTLIQVFFRLVEPTGGKIIIDGIDICALGLHDLRSRFGIIPQ 2271
Query: 1105 EPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQR 1164
EP LF+G++R+N+DP G Y+DDEIWK++++CQLK+T++ P LDS V D G NWS+GQR
Sbjct: 2272 EPVLFEGTVRSNIDPTGQYTDDEIWKSLDRCQLKDTVASKPEKLDSLVVDNGDNWSVGQR 2451
Query: 1165 QLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFEECTVITVAHRVPTVIDSD 1224
QL CLGRV+LK++R+L +DEATAS+DS TDA++Q+IIR++F T+I++AHR+PTV+D D
Sbjct: 2452 QLLCLGRVMLKQSRLLFMDEATASVDSQTDAVIQKIIREDFAARTIISIAHRIPTVMDCD 2631
Query: 1225 MVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEY 1257
V+V+ G+ E+D+PS L+ S F+ LV EY
Sbjct: 2632 RVLVVDAGRAKEFDKPSNLLQRQSLFAALVQEY 2730
Score = 74.7 bits (182), Expect(3) = e-179
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +1
Query: 417 VNALQIQDGTFIWDHESMSPALKDVNLEIKWRQKIAVCAPVGSEKSSFLYAILGEIPKIS 476
V A+ +QDGTF WD E + LK++NL++ + A+ VGS KSS L +ILGE+ + S
Sbjct: 145 VIAVDVQDGTFSWDDEGLEQDLKNINLKVNKGELTAIVGTVGSGKSSLLASILGEMHRNS 324
Query: 477 GTVYVGGTLAYVSQSSW 493
G V V G+ AYV+Q+SW
Sbjct: 325 GKVQVCGSTAYVAQTSW 375
Score = 67.8 bits (164), Expect = 3e-11
Identities = 53/226 (23%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Frame = +1
Query: 1039 LKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLKDLRMK 1098
LK I G +VG GSGKS+L++++ + + G + + G
Sbjct: 208 LKNINLKVNKGELTAIVGTVGSGKSSLLASILGEMHRNSGKVQVCG-------------S 348
Query: 1099 LSIIPQEPTLFKGSIRTNLD---PLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDE 1155
+ + Q + G+I N+ P+ +EI + C L++ + + + + +
Sbjct: 349 TAYVAQTSWIQNGTIEENILFGLPMNRQKYNEI---IRVCCLEKDLEMMEYGDQTEIGER 519
Query: 1156 GGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDA-ILQRIIRQEFEECTVITVA 1214
G N S GQ+Q L R + + I +LD+ +++D+ T I + +R + T++ V
Sbjct: 520 GINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGTEIFKECVRGALKGKTIVLVT 699
Query: 1215 HRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEYWSS 1260
H+V + + D ++V+ G +V+ + L+D+ F LVA + +S
Sbjct: 700 HQVDFLHNVDRIVVMRDGMIVQSGRYNDLLDSGLDFGVLVAAHETS 837
Score = 35.4 bits (80), Expect(3) = e-179
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +3
Query: 494 DTEWNSSR*YTIWQGNGQNKI*ESN*SLCFR*GYR*F*PR*SYRNR*ERD*HE--WRTKA 551
D++W++ R +++W N Q K+ + SL G R +R R H+ WR++A
Sbjct: 375 DSKWDN*REHSVWFTNEQTKVQ*NYQSLLL--GKRLRNDGIWGSDRDWRAWHKP*WRSEA 548
Query: 552 KDSTS*SSLQ*C*YLSS**SFQCS*CSY 579
ST S + *++SS** QCS*CSY
Sbjct: 549 AYSTCTSCIPRL*HISS**CIQCS*CSY 632
>TC88559 similar to GP|10172595|dbj|BAB01399. multidrug resistance-associated
protein (MRP); ABC-transoprter {Arabidopsis thaliana},
partial (26%)
Length = 1427
Score = 254 bits (650), Expect(2) = e-115
Identities = 124/206 (60%), Positives = 169/206 (81%), Gaps = 1/206 (0%)
Frame = +3
Query: 1061 GKSTLISALFRLVEPSRGDILIDGINICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPL 1120
GKSTLI LFRLVEP+ G+++ID INI ++GL DLR +LSIIPQ+PT+F+G++R+NLDPL
Sbjct: 582 GKSTLIQTLFRLVEPTAGEVIIDRINISTIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPL 761
Query: 1121 GLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRIL 1180
Y+D++IW+A++KCQL + + K LDSSVS+ G NWS+GQRQL CLGRVLLK+++IL
Sbjct: 762 EEYTDEQIWEALDKCQLGDEVRKKEGKLDSSVSENGENWSMGQRQLVCLGRVLLKKSKIL 941
Query: 1181 VLDEATASIDSATDAILQRIIRQEFEECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEP 1240
VLDEATAS+D+ATD ++Q+ +RQ F + TVIT+AHR+ +V+DSDMV++L G + EYD P
Sbjct: 942 VLDEATASVDTATDNLIQQTLRQHFTDSTVITIAHRITSVLDSDMVLLLDQGLIEEYDSP 1121
Query: 1241 SKLM-DTNSSFSKLVAEYWSSCRKNS 1265
+ L+ D +SSF+KLVAEY + R NS
Sbjct: 1122 TTLLEDKSSSFAKLVAEY--TMRSNS 1193
Score = 180 bits (456), Expect(2) = e-115
Identities = 90/195 (46%), Positives = 129/195 (66%), Gaps = 2/195 (1%)
Frame = +2
Query: 870 RINGTTKAPVMNFAAETHLGVVTVRAFNMVDRFFKNYLKLVDTDASLFFHSNVAMEWLVL 929
R+ G KAP++ AET G T+R+F+ RF++ +KL D + F+ AMEWL
Sbjct: 5 RLGGVCKAPIIQHFAETISGTSTIRSFDQQSRFYETNMKLTDGYSRPKFNIVAAMEWLCF 184
Query: 930 RIEALLNLTVITAALLLILLPQRYLSPGRVGLSLSYALTLNGAQIFWTRW-FSNLSNYII 988
R++ L ++T + + LI +P ++PG GL+++Y LTLN Q W W NL N II
Sbjct: 185 RLDMLSSITFAFSLIFLISIPPGIINPGIAGLAVTYGLTLNRTQA-WVIWNLCNLENKII 361
Query: 989 SVERIKQFIHIPAEPPAIV-DNNRPPSSWPSKGKIDLQGLEVRYRPNAPLVLKGITCTFK 1047
SVERI Q+ IP+EPP ++ + NRP SWP+ G++D++ L+VRY P+ PLVL+G+TCTF
Sbjct: 362 SVERILQYTTIPSEPPLVLEEENRPDPSWPAYGEVDIRNLQVRYAPHLPLVLRGLTCTFN 541
Query: 1048 GGSRVGVVGRTGSGK 1062
GG + G+VGRTGSGK
Sbjct: 542 GGLKTGIVGRTGSGK 586
>TC87490 similar to PIR|T52080|T52080 multi resistance protein [imported] -
Arabidopsis thaliana, partial (19%)
Length = 927
Score = 342 bits (878), Expect = 4e-94
Identities = 172/293 (58%), Positives = 220/293 (74%), Gaps = 1/293 (0%)
Frame = +1
Query: 976 WTRWFSNLSNYIISVERIKQFIHIPAEPPAIVDNNRPPSSWPSKGKIDLQGLEVRYRPNA 1035
W F L N IIS+ERI Q+ IP+E P ++++ RPP SWP G I L L+VRY+ N
Sbjct: 28 WILSFCKLENKIISIERIYQYSQIPSEAPPLIEDFRPPPSWPVNGTIQLIDLKVRYKENL 207
Query: 1036 PLVLKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLKDL 1095
P+VL G++CTF GG ++G+VGRTGSGKSTLI ALFRLVEP+ G ILID I+I +GL DL
Sbjct: 208 PMVLHGVSCTFPGGKKIGIVGRTGSGKSTLIQALFRLVEPAAGSILIDNIDISGIGLHDL 387
Query: 1096 RMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDE 1155
R LSIIPQ+PTLF+G+IR NLDPL +SD EIW+A++K QL E I + LD+ V
Sbjct: 388 RSHLSIIPQDPTLFEGTIRGNLDPLEEHSDKEIWEALDKSQLGEIIREKGQKLDTPVLQN 567
Query: 1156 GGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFEECTVITVAH 1215
G NWS+GQRQL LGR LLK+++ILVLDEATAS+DSATD ++Q++IR+EF +CTV T+AH
Sbjct: 568 GDNWSVGQRQLVALGRALLKQSKILVLDEATASVDSATDNLIQKVIREEFRDCTVCTIAH 747
Query: 1216 RVPTVIDSDMVMVLSYGKLVEYDEPSKLM-DTNSSFSKLVAEYWSSCRKNSLP 1267
R+PTVIDSD+V+VL+ G L E+D P +L+ D +S F KLV EY S R +P
Sbjct: 748 RIPTVIDSDLVLVLNDGLLAEFDTPLRLLEDKSSMFLKLVTEY--SSRSTGMP 900
>TC92328 similar to PIR|T52080|T52080 multi resistance protein [imported] -
Arabidopsis thaliana, partial (18%)
Length = 1133
Score = 337 bits (864), Expect = 2e-92
Identities = 166/282 (58%), Positives = 221/282 (77%), Gaps = 1/282 (0%)
Frame = +1
Query: 987 IISVERIKQFIHIPAEPPAIVDNNRPPSSWPSKGKIDLQGLEVRYRPNAPLVLKGITCTF 1046
+ S+ERI Q+ IP+E PA+++++RPPSSWP+ G I++ L+VRY+ N PLVL G++CTF
Sbjct: 1 LYSIERIYQYSQIPSEAPAMIEDSRPPSSWPANGTIEIFDLKVRYKENLPLVLHGVSCTF 180
Query: 1047 KGGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLKDLRMKLSIIPQEP 1106
GG +G+VGRTGSGKSTLI ALFRL+EP+ G I ID INI +GL DLR LSIIPQ+P
Sbjct: 181 PGGKNIGIVGRTGSGKSTLIQALFRLIEPADGSIHIDNINIFEIGLHDLRSHLSIIPQDP 360
Query: 1107 TLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQL 1166
TLF+G+IR NLDPL +SD +IW+A++K QL E I + LD+ V + G NWS+GQRQL
Sbjct: 361 TLFEGTIRGNLDPLEEHSDKDIWEALDKSQLGEIIREKGQKLDTPVIENGDNWSVGQRQL 540
Query: 1167 FCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFEECTVITVAHRVPTVIDSDMV 1226
LGR LLK+++ILVLDEATAS+D+ATD ++Q+IIR EF++CTV+T+AHR+PTVIDSD V
Sbjct: 541 VSLGRALLKQSKILVLDEATASVDTATDNLIQKIIRTEFKDCTVLTIAHRIPTVIDSDQV 720
Query: 1227 MVLSYGKLVEYDEPSKLM-DTNSSFSKLVAEYWSSCRKNSLP 1267
+VLS G++ E+D P +L+ D +S F KLV EY S R + +P
Sbjct: 721 LVLSDGRVAEFDTPLRLLEDRSSMFLKLVTEY--SSRSSGIP 840
>TC78391 similar to PIR|F84919|F84919 glutathione-conjugate transporter AtMRP4
[imported] - Arabidopsis thaliana, partial (17%)
Length = 1265
Score = 286 bits (731), Expect(2) = 2e-88
Identities = 133/214 (62%), Positives = 173/214 (80%)
Frame = +2
Query: 992 RIKQFIHIPAEPPAIVDNNRPPSSWPSKGKIDLQGLEVRYRPNAPLVLKGITCTFKGGSR 1051
RIKQF ++ +E P + + P +WPS G I+L L+VRYRP PLVLKG++ T +GG +
Sbjct: 2 RIKQFTNLSSEAPWKIADKSLPHNWPSHGTIELNNLQVRYRPTTPLVLKGVSLTIEGGEK 181
Query: 1052 VGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLKDLRMKLSIIPQEPTLFKG 1111
VGVVGRTGSGKSTLI LFRL+EPS G I+IDGINI ++GL DLR + IIPQEP LF+G
Sbjct: 182 VGVVGRTGSGKSTLIQVLFRLIEPSAGKIIIDGINISNVGLHDLRSRFGIIPQEPVLFQG 361
Query: 1112 SIRTNLDPLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGR 1171
++RTN+DPLGLYS++EIWK++E+CQLKE ++ P LD+ V D G NWS+GQRQL CLGR
Sbjct: 362 TVRTNIDPLGLYSEEEIWKSLERCQLKEAVAAKPEKLDALVVDGGDNWSVGQRQLLCLGR 541
Query: 1172 VLLKRNRILVLDEATASIDSATDAILQRIIRQEF 1205
++LKR++IL +DEATAS+DS TDA+LQ+IIR++F
Sbjct: 542 IMLKRSKILFMDEATASVDSQTDAVLQKIIREDF 643
Score = 60.1 bits (144), Expect(2) = 2e-88
Identities = 27/60 (45%), Positives = 42/60 (70%)
Frame = +3
Query: 1198 QRIIRQEFEECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEY 1257
+R + F + T+I++AHR+PTV+D D V+V+ G EYD+PS+L++ S F+ LV EY
Sbjct: 621 KRSSEKTFADRTIISIAHRIPTVMDCDKVLVIDEGYAKEYDKPSRLLERPSLFAALVKEY 800
>BG449884 similar to GP|10172595|d multidrug resistance-associated protein
(MRP); ABC-transoprter {Arabidopsis thaliana}, partial
(13%)
Length = 647
Score = 277 bits (708), Expect = 2e-74
Identities = 124/214 (57%), Positives = 176/214 (81%)
Frame = +2
Query: 1010 NRPPSSWPSKGKIDLQGLEVRYRPNAPLVLKGITCTFKGGSRVGVVGRTGSGKSTLISAL 1069
++P SWPS G++ +Q L+VRY P+ PLVL+G+TCTF G++ G+VGRTGSGK+TL+ AL
Sbjct: 5 SQPDHSWPSFGEVHIQDLQVRYAPHLPLVLRGLTCTFTAGAKAGIVGRTGSGKTTLVQAL 184
Query: 1070 FRLVEPSRGDILIDGINICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIW 1129
FRLVEP G ILID IN+ +G+ DLR +LSIIPQ+PT+F+G++R+NLDPL Y+D++IW
Sbjct: 185 FRLVEPVAGQILIDNINVSLIGIHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIW 364
Query: 1130 KAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASI 1189
+A++ CQL + + K L S+V++ G NWS+GQRQL CLGRVLLK+++ILVLDEATAS+
Sbjct: 365 EALDMCQLGDEVRKKEGKLHSTVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASV 544
Query: 1190 DSATDAILQRIIRQEFEECTVITVAHRVPTVIDS 1223
D+ATD I+Q+ +++ F +CTVIT+AHR+ +++DS
Sbjct: 545 DTATDNIIQQTLKKHFSDCTVITIAHRITSILDS 646
>TC78392 similar to PIR|F84919|F84919 glutathione-conjugate transporter AtMRP4
[imported] - Arabidopsis thaliana, partial (19%)
Length = 1135
Score = 164 bits (416), Expect(2) = 4e-69
Identities = 86/164 (52%), Positives = 112/164 (67%)
Frame = +2
Query: 924 MEWLVLRIEALLNLTVITAALLLILLPQRYLSPGRVGLSLSYALTLNGAQIFWTRWFSNL 983
M W + ++ L + T L +I LP + P VGLSLSY L+L+G F ++
Sbjct: 629 MAWFSFGLMGVVFLCIAT--LFMIFLPSAIVKPEYVGLSLSYGLSLSGLLSFTITMTCSV 802
Query: 984 SNYIISVERIKQFIHIPAEPPAIVDNNRPPSSWPSKGKIDLQGLEVRYRPNAPLVLKGIT 1043
N ++SVERIKQF ++P+E P + + + P +WPS G I+L LEVRYRPN PLVLKG++
Sbjct: 803 ENKMVSVERIKQFTNLPSEAPWKIAD-KSPQNWPSHGTIELHNLEVRYRPNTPLVLKGVS 979
Query: 1044 CTFKGGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINI 1087
T +GG +VGVVGRTGSGKSTLI LFRL+EPS G I+IDGINI
Sbjct: 980 LTIEGGEKVGVVGRTGSGKSTLIQVLFRLIEPSAGKIIIDGINI 1111
Score = 117 bits (292), Expect(2) = 4e-69
Identities = 66/210 (31%), Positives = 114/210 (53%), Gaps = 8/210 (3%)
Frame = +3
Query: 731 SSNFWLATAI-EIPKVTDTTLIGVYALLSISSTSFVYVRSYFAALLGLKASTAFFSSFTT 789
+ ++WLA A + + T I VYA++++ + V VR+ GLK S +FF
Sbjct: 21 AGDYWLAIATADDSGIPSFTFITVYAVIAVVACIGVMVRALLFTYWGLKTSQSFFIGLLQ 200
Query: 790 SIFNAPMLFFDSTPA-------SSDLSILDFDIPYSLTCVAIVAIEVLVMIFVIASVTWQ 842
SI +APM FFD+TP+ S+D+ +D IP + V + + + ++ V +W+
Sbjct: 201 SILHAPMSFFDTTPSGRILSRVSTDILWVDISIPMLVNFVMVAYLSLFSILIVTCQNSWE 380
Query: 843 VLIVAVPAMVALIFIQKYYQATARELIRINGTTKAPVMNFAAETHLGVVTVRAFNMVDRF 902
+ + +P + +K+Y AT+REL R++ TKAPV++ +ET GV+T+R + F
Sbjct: 381 TVFLLIPLFWLNNWYRKFYLATSRELTRLDSITKAPVIHHFSETISGVMTIRCLRKQNAF 560
Query: 903 FKNYLKLVDTDASLFFHSNVAMEWLVLRIE 932
+ + V+ + FH+N A EWL R++
Sbjct: 561 SQENIDRVNASLRMDFHNNGANEWLGFRLD 650
>CB891756 similar to GP|22553016|e multidrug-resistance related protein
{Arabidopsis thaliana}, partial (11%)
Length = 537
Score = 256 bits (654), Expect = 4e-68
Identities = 133/178 (74%), Positives = 150/178 (83%), Gaps = 7/178 (3%)
Frame = +3
Query: 756 LLSISSTSFVYVRSYFAALLGLKASTAFFSSFTTSIFNAPMLFFDSTP-------ASSDL 808
L+S + FVY+RSY A LGL AS A+FSSFTT+IFN+PM+FFDSTP ASSDL
Sbjct: 3 LISFTGVMFVYIRSYLMARLGLNASIAYFSSFTTAIFNSPMMFFDSTPVGRILTRASSDL 182
Query: 809 SILDFDIPYSLTCVAIVAIEVLVMIFVIASVTWQVLIVAVPAMVALIFIQKYYQATAREL 868
SILDFD+P+++ VAIEVLV+I ++ASVTWQVLIVAVPAMVA IFIQ YYQATAREL
Sbjct: 183 SILDFDMPHAVHFALSVAIEVLVIICIMASVTWQVLIVAVPAMVASIFIQHYYQATAREL 362
Query: 869 IRINGTTKAPVMNFAAETHLGVVTVRAFNMVDRFFKNYLKLVDTDASLFFHSNVAMEW 926
+RINGTTKAPVMNFAAET LGVVT+RAFNMVDR K YLKLVDTDA+LFFHSNVAMEW
Sbjct: 363 MRINGTTKAPVMNFAAETSLGVVTIRAFNMVDRLMKYYLKLVDTDATLFFHSNVAMEW 536
>BE943010 similar to GP|6634763|gb Similar to gb|AF008124 Arabidopsis thaliana
glutathione S-conjugate transporting ATPase (AtMRP1),
partial (15%)
Length = 629
Score = 215 bits (548), Expect = 8e-56
Identities = 102/207 (49%), Positives = 152/207 (73%)
Frame = +2
Query: 1038 VLKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLKDLRM 1097
VL G++ ++GVVGRTG+GKS++++ALFR+VE G I+IDG +I + GL DLR
Sbjct: 2 VLHGLSFVVSSMEKIGVVGRTGAGKSSMLNALFRIVELQSGRIIIDGCDISTFGLADLRR 181
Query: 1098 KLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGG 1157
L+IIPQ P LF G++R NLDP Y+D +IW+A+E+ +K+ I + LD+ VS+ G
Sbjct: 182 VLTIIPQSPVLFSGTVRFNLDPFNEYNDVDIWEALERAHMKDVIRRNQFGLDAQVSEGGD 361
Query: 1158 NWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFEECTVITVAHRV 1217
N+S+GQRQL L R LL+R+++LVLDEATAS+D TDA++Q+ IRQE CT++ +AHR+
Sbjct: 362 NFSVGQRQLLSLARALLRRSKVLVLDEATASVDVRTDALIQKTIRQECNSCTMLIIAHRL 541
Query: 1218 PTVIDSDMVMVLSYGKLVEYDEPSKLM 1244
TV+D + +++L GK++EY+ P +L+
Sbjct: 542 NTVVDCNRILLLDAGKVLEYNSPKELL 622
>TC91451 similar to GP|22553016|emb|CAD44995. multidrug-resistance related
protein {Arabidopsis thaliana}, partial (8%)
Length = 711
Score = 214 bits (544), Expect = 2e-55
Identities = 104/117 (88%), Positives = 113/117 (95%)
Frame = +1
Query: 1154 DEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFEECTVITV 1213
DEGGNWSLGQRQLFCLGRVLLKRN+ILVLDEATASIDSATDAILQR+IRQEF ECTVIT+
Sbjct: 1 DEGGNWSLGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAILQRVIRQEFAECTVITI 180
Query: 1214 AHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEYWSSCRKNSLPYIS 1270
AHR+PTVIDSDMVM+LSYGKLVEYDEPSKLM+TNSSFSKLVAEYWSS +K+S+P S
Sbjct: 181 AHRIPTVIDSDMVMILSYGKLVEYDEPSKLMETNSSFSKLVAEYWSSYKKSSIPNTS 351
>BQ141339 similar to PIR|T47796|T4 ABC transporter-like protein - Arabidopsis
thaliana, partial (10%)
Length = 477
Score = 188 bits (477), Expect(2) = 1e-49
Identities = 88/138 (63%), Positives = 112/138 (80%)
Frame = +3
Query: 1037 LVLKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLKDLR 1096
LVL+GITCTF+GG ++G+VGRTGSGK+TLI ALFRLVEP+ G I++DGI+I S+GL DLR
Sbjct: 63 LVLRGITCTFEGGHKIGIVGRTGSGKTTLIGALFRLVEPAGGKIIVDGIDIGSIGLHDLR 242
Query: 1097 MKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDEG 1156
+ IIPQ+PTLF G++R NLDPL +SD EIW+ + KCQL+E + + L SSV ++G
Sbjct: 243 SRFGIIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGKCQLQEAVQEKEGGLXSSVVEDG 422
Query: 1157 GNWSLGQRQLFCLGRVLL 1174
NWS+GQRQLFCLGR LL
Sbjct: 423 ANWSMGQRQLFCLGRSLL 476
Score = 28.5 bits (62), Expect(2) = 1e-49
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = +2
Query: 1017 PSKGKIDLQGLEVRYRPNAP 1036
P G+++++ L++RYRP+AP
Sbjct: 2 PVVGRVEIKELQIRYRPDAP 61
>CB894116 similar to PIR|T47796|T4 ABC transporter-like protein - Arabidopsis
thaliana, partial (16%)
Length = 791
Score = 179 bits (453), Expect = 8e-45
Identities = 97/242 (40%), Positives = 142/242 (58%), Gaps = 7/242 (2%)
Frame = +3
Query: 683 GAQLTQEEEKVIGNVGWKPLWDYINYSNGTLMSCLVILGQCCFLALQTSSNFWLATAIEI 742
G QL ++EE+ IG+ G++P Y++ + G + + + F+ Q N W+A ++
Sbjct: 63 GDQLIKQEEREIGDRGFRPYLQYLSQNKGYVYFSVASISHIIFVIGQILQNSWMAANVDN 242
Query: 743 PKVTDTTLIGVYALLSISSTSFVYVRSYFAALLGLKASTAFFSSFTTSIFNAPMLFFDST 802
PKVT LI VY + ++ST F+ +RS F LGL++S + F S+F APM F+DST
Sbjct: 243 PKVTTLRLILVYLFIGVTSTIFLLMRSLFTVALGLQSSKSLFLQLLNSLFRAPMSFYDST 422
Query: 803 P-------ASSDLSILDFDIPYSLTCVAIVAIEVLVMIFVIASVTWQVLIVAVPAMVALI 855
P SSDLSI+D D+P+ L + V+A VTWQVL V++P + +
Sbjct: 423 PLGRILSRVSSDLSIVDLDVPFGLLFAVGATTNCYANLTVLAVVTWQVLFVSIPMIYFAL 602
Query: 856 FIQKYYQATARELIRINGTTKAPVMNFAAETHLGVVTVRAFNMVDRFFKNYLKLVDTDAS 915
+Q YY ATA+EL+R+NGTTK+ V N AE+ G VT+RAF RFF L L+D +A+
Sbjct: 603 RLQGYYFATAKELMRMNGTTKSFVANHLAESVAGAVTIRAFEQEGRFFVKNLGLIDINAT 782
Query: 916 LF 917
F
Sbjct: 783 PF 788
>TC80066 similar to PIR|T50518|T50518 ABC transporter-like protein -
Arabidopsis thaliana, partial (14%)
Length = 992
Score = 176 bits (446), Expect = 5e-44
Identities = 90/161 (55%), Positives = 116/161 (71%), Gaps = 1/161 (0%)
Frame = +3
Query: 1114 RTNLDPLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVL 1173
R N PL YSD E+W+A++KCQL + LDS V + G NWS GQRQLFCLGR L
Sbjct: 3 RGNWTPLEQYSDSEVWEALDKCQLGHLVRAKEEKLDSPVVENGDNWSAGQRQLFCLGRAL 182
Query: 1174 LKRNRILVLDEATASIDSATDAILQRIIRQEFEECTVITVAHRVPTVIDSDMVMVLSYGK 1233
LK++ ILVLDEATAS+DSATD ++Q II Q+F TV+T+AHR+ TVIDSD+V+VLS G+
Sbjct: 183 LKKSSILVLDEATASVDSATDGVIQDIICQQFNNRTVVTIAHRIHTVIDSDLVLVLSDGR 362
Query: 1234 LVEYDEPSKLMDTNSS-FSKLVAEYWSSCRKNSLPYISKKH 1273
+ EYDEPSKL++ S F KL+ EY S R +S ++ +H
Sbjct: 363 IAEYDEPSKLLEREDSFFYKLIKEY--SSRSHSFNNLATQH 479
>AW775084 similar to PIR|T47796|T4 ABC transporter-like protein - Arabidopsis
thaliana, partial (8%)
Length = 580
Score = 158 bits (399), Expect = 1e-38
Identities = 78/113 (69%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
Frame = -2
Query: 1148 LDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFEE 1207
L+SSV ++G NWS+GQRQLFCLGR LL+R+RILVLDEATASID++TD ILQ+ IR EF +
Sbjct: 579 LNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNSTDLILQKTIRAEFAD 400
Query: 1208 CTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSS-FSKLVAEYWS 1259
CTVITVAHR+PTV+D MV+ +S GKL EYDEP LM S F KLV EYWS
Sbjct: 399 CTVITVAHRIPTVMDCSMVLAISDGKLAEYDEPKNLMKREESLFRKLVKEYWS 241
>TC84873 similar to GP|2909781|gb|AAC04245.1| MgATP-energized glutathione
S-conjugate pump {Arabidopsis thaliana}, partial (22%)
Length = 1158
Score = 144 bits (363), Expect = 2e-34
Identities = 110/380 (28%), Positives = 176/380 (45%), Gaps = 22/380 (5%)
Frame = +3
Query: 688 QEEEKVIGNVGWKPLWDYINYSNGTLMSCLVILGQCCFL--ALQTSSNFWLATAIEIPKV 745
++EE+ G V L Y N GT + +++L C F AL+ SS+ WL+
Sbjct: 39 KQEERETGVVSLNVLIRYKNALGGTWV--ILVLFACYFSTEALRVSSSTWLS------HW 194
Query: 746 TDTTLIG---------VYALLSISSTSFVYVRSYFAALLGLKASTAFFSSFTTSIFNAPM 796
TD + + VYA LS + SY+ + L A+ + SI APM
Sbjct: 195 TDQSAVDGYNPAFYNLVYAALSFGQVFVSLINSYWLIISSLYAARRLHEAMLHSILRAPM 374
Query: 797 LFFDSTPA-------SSDLSILDFDIPYSLTCVAIVAIEVLVMIFVIASVTWQVLIVAVP 849
+FF + P + DL +D ++ ++ ++L +I V+ L +P
Sbjct: 375 VFFHTNPLGRVINRFAKDLGDIDRNVAPFVSMFLGQISQLLSTFILIGIVSTMSLWAIMP 554
Query: 850 AMVALIFIQKYYQATARELIRINGTTKAPVMNFAAETHLGVVTVRAFNMVDRFFKNYLKL 909
+V YYQ+TARE+ R++ +++PV E G+ T+RA+ DR +
Sbjct: 555 LLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGRS 734
Query: 910 VDTDASLFFHSNVAMEWLVLRIEALLNLTVITAALLLILLPQRYLSP----GRVGLSLSY 965
+D + + A WL +R+E L L + A ++ R + +GL LSY
Sbjct: 735 MDNNIRYTLVNISANRWLAIRLETLGGLMIWFTATFAVMQNGRAENQQEFASTMGLLLSY 914
Query: 966 ALTLNGAQIFWTRWFSNLSNYIISVERIKQFIHIPAEPPAIVDNNRPPSSWPSKGKIDLQ 1025
AL + R S N + SVER+ +I +P+E P+++D+NRPP WPS G I
Sbjct: 915 ALNITSLLTGVLRLASLAENSLNSVERVGTYIDLPSEAPSVIDDNRPPPGWPSSGSIKFD 1094
Query: 1026 GLEVRYRPNAPLVLKGITCT 1045
+ +RYRP P VL G++ T
Sbjct: 1095 EVVLRYRPELPPVLHGLSFT 1154
>TC79335 similar to GP|14715462|dbj|BAB62040. CjMDR1 {Coptis japonica},
partial (23%)
Length = 1135
Score = 139 bits (350), Expect = 7e-33
Identities = 80/248 (32%), Positives = 139/248 (55%), Gaps = 4/248 (1%)
Frame = +2
Query: 1019 KGKIDLQGLEVRYRPNAP--LVLKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLVEPS 1076
KG+I+L+ + +Y P+ P + + + T G V +VG +GSGKST+I+ L R +P
Sbjct: 161 KGEIELRHISFKY-PSRPDIQIFRDLNLTIHSGKTVALVGESGSGKSTVIALLQRFYDPD 337
Query: 1077 RGDILIDGINICSMGLKDLRMKLSIIPQEPTLFKGSIRTNL--DPLGLYSDDEIWKAVEK 1134
G+I +DGI I + LK LR ++ ++ QEP LF +IR N+ G+ ++ EI A E
Sbjct: 338 SGEITLDGIEIRQLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGIATEAEIIAAAEL 517
Query: 1135 CQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATD 1194
IS L D+ V + G S GQ+Q + R ++K +IL+LDEAT+++D+ ++
Sbjct: 518 ANAHRFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESE 697
Query: 1195 AILQRIIRQEFEECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLV 1254
++Q + + T + VAHR+ T+ ++D++ V+ G +VE L++ F +
Sbjct: 698 RVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINVKDGFYASL 877
Query: 1255 AEYWSSCR 1262
+ +S +
Sbjct: 878 VQLHTSAK 901
>TC78393 similar to PIR|T48059|T48059 ABC transporter-like protein -
Arabidopsis thaliana, partial (12%)
Length = 817
Score = 135 bits (339), Expect = 1e-31
Identities = 82/248 (33%), Positives = 131/248 (52%), Gaps = 8/248 (3%)
Frame = +2
Query: 732 SNFWLATAI-EIPKVTDTTLIGVYALLSISSTSFVYVRSYFAALLGLKASTAFFSSFTTS 790
S++WLA A + V+ T I A+L++ S V R++F GLK S + F
Sbjct: 17 SDYWLAIATADDSAVSSFTFITDSAVLAVVSCIVVMARAFFFTYWGLKTSQSCFVGMLQR 196
Query: 791 IFNAPMLFFDSTPA-------SSDLSILDFDIPYSLTCVAIVAIEVLVMIFVIASVTWQV 843
I +APM FFD+TP+ S+D+ LD IP + V + + ++ V +W+
Sbjct: 197 ILHAPMSFFDTTPSGRILSRVSTDILSLDIQIPIFVNLVTTTLVGLFSILVVTCQNSWET 376
Query: 844 LIVAVPAMVALIFIQKYYQATARELIRINGTTKAPVMNFAAETHLGVVTVRAFNMVDRFF 903
+ + +P + +KYY AT+REL R++ TKAPV++ +ET GV+T+R+ + F
Sbjct: 377 VFLLIPLFWLSNWYRKYYLATSRELTRLDSITKAPVIHHFSETISGVMTIRSSRKQNAFS 556
Query: 904 KNYLKLVDTDASLFFHSNVAMEWLVLRIEALLNLTVITAALLLILLPQRYLSPGRVGLSL 963
+ + V+ + FH+N A EWL R++ + + A L +I LP P VG+SL
Sbjct: 557 QENVDRVNASLRMDFHNNGANEWLGFRLDYMGVTLLCIATLFMIFLPSGIARPEYVGMSL 736
Query: 964 SYALTLNG 971
SY L+G
Sbjct: 737 SYGPALSG 760
>TC78215 similar to GP|10177549|dbj|BAB10828. ABC transporter-like protein
{Arabidopsis thaliana}, partial (36%)
Length = 1176
Score = 135 bits (339), Expect = 1e-31
Identities = 77/220 (35%), Positives = 129/220 (58%), Gaps = 2/220 (0%)
Frame = +1
Query: 1037 LVLKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLKDLR 1096
+VLKGI + GS+V +VG +G GK+T+ + + R +P++G+IL++G+ + + K L
Sbjct: 43 MVLKGINIKLQPGSKVALVGPSGGGKTTIANLIERFYDPTKGNILVNGVPLVEISHKHLH 222
Query: 1097 MKLSIIPQEPTLFKGSIRTNLDPL--GLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSD 1154
K+SI+ QEPTLF SI N+ G D +I A + E IS P + V +
Sbjct: 223 RKISIVSQEPTLFNCSIEENIAYGFDGKIEDADIENAAKMANAHEFISNFPEKYKTFVGE 402
Query: 1155 EGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFEECTVITVA 1214
G S GQ+Q + R LL +IL+LDEAT+++D+ ++ ++Q + + TV+ +A
Sbjct: 403 RGIRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMDSIMKGRTVLVIA 582
Query: 1215 HRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLV 1254
HR+ TV ++ V V+S G++VE +L++ N ++ LV
Sbjct: 583 HRLSTVKTANTVAVVSDGQIVESGTHDELLEKNGVYTALV 702
>TC77937 similar to GP|14715462|dbj|BAB62040. CjMDR1 {Coptis japonica},
partial (24%)
Length = 1164
Score = 134 bits (338), Expect = 2e-31
Identities = 81/246 (32%), Positives = 136/246 (54%), Gaps = 4/246 (1%)
Frame = +3
Query: 1019 KGKIDLQGLEVRYRPNAP--LVLKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLVEPS 1076
KG+I+ + + +Y P P + + + G V +VG +GSGKST+IS + R +P
Sbjct: 240 KGEIEFKHVNFKY-PTRPDIQIFRDLCLNIHSGKTVALVGESGSGKSTVISLIQRFYDPD 416
Query: 1077 RGDILIDGINICSMGLKDLRMKLSIIPQEPTLFKGSIRTNL--DPLGLYSDDEIWKAVEK 1134
G I +DG I S+ +K LR ++ ++ QEP LF +IR N+ G S+ EI A E
Sbjct: 417 SGHITLDGKEIQSLQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDASEAEIIAAAEL 596
Query: 1135 CQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATD 1194
+ IS L D+ V + G S GQ+Q + R ++K +IL+LDEAT+++D+ ++
Sbjct: 597 ANAHKFISSLQKGYDTVVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESE 776
Query: 1195 AILQRIIRQEFEECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLV 1254
++Q + + E T I VAHR+ T+ +D++ V+ G + E + L+ ++ LV
Sbjct: 777 KVVQDALDRVMVERTTIIVAHRLSTIKGADLIAVVKNGVIAEKGKHEALLHKGGDYASLV 956
Query: 1255 AEYWSS 1260
A + S+
Sbjct: 957 ALHTSA 974
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.346 0.150 0.508
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,485,956
Number of Sequences: 36976
Number of extensions: 705170
Number of successful extensions: 9902
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 4377
Number of HSP's successfully gapped in prelim test: 588
Number of HSP's that attempted gapping in prelim test: 4998
Number of HSP's gapped (non-prelim): 5727
length of query: 1273
length of database: 9,014,727
effective HSP length: 107
effective length of query: 1166
effective length of database: 5,058,295
effective search space: 5897971970
effective search space used: 5897971970
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.7 bits)
S2: 64 (29.3 bits)
Medicago: description of AC119410.2