TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC119408.7 + phase: 0 /pseudo
         (218 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC78802 similar to GP|19424009|gb|AAL87286.1 unknown protein {Ar...   426  e-120
TC89469 similar to PIR|T04793|T04793 probable fimbrin ATFIM1 - A...    31  0.42
TC88524 similar to PIR|B86315|B86315 hypothetical protein AAF972...    28  2.7
BF637847 weakly similar to PIR|T02119|T021 probable DnaJ protein...    27  4.6
TC82561 similar to GP|9758643|dbj|BAB09267.1 fimbrin {Arabidopsi...    27  7.9
TC85736 homologue to GP|9230771|gb|AAF85975.1| cytosolic phospho...    27  7.9

>TC78802 similar to GP|19424009|gb|AAL87286.1 unknown protein {Arabidopsis
           thaliana}, complete
          Length = 1151

 Score =  426 bits (1094), Expect = e-120
 Identities = 213/213 (100%), Positives = 213/213 (100%)
 Frame = +3

Query: 1   MAAPFFSTPFQPYVYQSQQDAIIPFQILGGESQVVQIMLKPHEKIIAKPGSMCFMSGSVE 60
           MAAPFFSTPFQPYVYQSQQDAIIPFQILGGESQVVQIMLKPHEKIIAKPGSMCFMSGSVE
Sbjct: 105 MAAPFFSTPFQPYVYQSQQDAIIPFQILGGESQVVQIMLKPHEKIIAKPGSMCFMSGSVE 284

Query: 61  MENAYLPENEVGIWQWLFGKTVTNIVVRNSGPSDGFVGIAAPYFARILPIDLATFNGEIL 120
           MENAYLPENEVGIWQWLFGKTVTNIVVRNSGPSDGFVGIAAPYFARILPIDLATFNGEIL
Sbjct: 285 MENAYLPENEVGIWQWLFGKTVTNIVVRNSGPSDGFVGIAAPYFARILPIDLATFNGEIL 464

Query: 121 CQPDAFLCSVNDVKVSNTVDQRGRNVVAGAEVFLRQKLSGQGLAFILGGGSVVQKILEVG 180
           CQPDAFLCSVNDVKVSNTVDQRGRNVVAGAEVFLRQKLSGQGLAFILGGGSVVQKILEVG
Sbjct: 465 CQPDAFLCSVNDVKVSNTVDQRGRNVVAGAEVFLRQKLSGQGLAFILGGGSVVQKILEVG 644

Query: 181 EVLAVDVSCIVAVTSTVDIQIKYNGPARRTMFG 213
           EVLAVDVSCIVAVTSTVDIQIKYNGPARRTMFG
Sbjct: 645 EVLAVDVSCIVAVTSTVDIQIKYNGPARRTMFG 743


>TC89469 similar to PIR|T04793|T04793 probable fimbrin ATFIM1 - Arabidopsis
           thaliana, partial (47%)
          Length = 1308

 Score = 30.8 bits (68), Expect = 0.42
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +3

Query: 102 PYFARILPIDLATFNGEILCQPDAFLCSVNDVKVSNTVDQRGRNVVAGAEVFLRQK 157
           P+ ++ LP+D AT +   L +    LC + +V V  T+D+R  N      ++ R +
Sbjct: 744 PFLSQYLPLDPATNDLFDLSKDGILLCKLINVAVPGTIDERAINTKRNLSLWERNE 911


>TC88524 similar to PIR|B86315|B86315 hypothetical protein AAF97277.1
           [imported] - Arabidopsis thaliana, partial (53%)
          Length = 1335

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
 Frame = +1

Query: 14  VYQSQQDAIIPFQILGGESQVVQIMLKP-------HEKIIAKPGSMCFMSGSVEM 61
           +Y+SQQ+A+   ++LG   Q+V+I +K        +E+++ +  +  F  GS  +
Sbjct: 274 LYESQQEAVGREEVLGRLDQIVKIWVKTISRAKGFNEQLVQEANAKIFTFGSYRL 438


>BF637847 weakly similar to PIR|T02119|T021 probable DnaJ protein [imported]
           - Arabidopsis thaliana, partial (18%)
          Length = 491

 Score = 27.3 bits (59), Expect = 4.6
 Identities = 15/40 (37%), Positives = 26/40 (64%)
 Frame = +1

Query: 160 GQGLAFILGGGSVVQKILEVGEVLAVDVSCIVAVTSTVDI 199
           G+GL+ I GGG VV  + EV   + V V+ I++++  +D+
Sbjct: 241 GKGLSLITGGGQVV--VEEVVVPVEVPVTIIISLSIVMDM 354


>TC82561 similar to GP|9758643|dbj|BAB09267.1 fimbrin {Arabidopsis
           thaliana}, partial (28%)
          Length = 770

 Score = 26.6 bits (57), Expect = 7.9
 Identities = 14/43 (32%), Positives = 22/43 (50%)
 Frame = +3

Query: 103 YFARILPIDLATFNGEILCQPDAFLCSVNDVKVSNTVDQRGRN 145
           +  + LPID +T     L +    LC + +V V  T+D+R  N
Sbjct: 606 FMKQFLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAIN 734


>TC85736 homologue to GP|9230771|gb|AAF85975.1| cytosolic phosphoglycerate
            kinase {Pisum sativum}, complete
          Length = 1559

 Score = 26.6 bits (57), Expect = 7.9
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = +2

Query: 148  AGAEVFLRQ--KLSGQGLAFILGGGSVVQKILEVG 180
            AG E   ++  ++SG+G+  I+GGG  V  + +VG
Sbjct: 1067 AGTEAIAKKLAEVSGKGVTTIIGGGDSVAAVEKVG 1171


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.322    0.139    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,192,920
Number of Sequences: 36976
Number of extensions: 74335
Number of successful extensions: 293
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of query: 218
length of database: 9,014,727
effective HSP length: 92
effective length of query: 126
effective length of database: 5,612,935
effective search space: 707229810
effective search space used: 707229810
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)