BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC119408.12 + phase: 0 /partial
(467 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC82843 similar to PIR|A44226|A44226 auxin-independent growth pr... 446 e-125
TC89217 similar to PIR|E84799|E84799 similar to axi 1 protein fr... 256 1e-68
CB895020 similar to PIR|G86357|G86 Similar to auxin-independent ... 231 6e-61
TC89607 similar to GP|20856498|gb|AAM26669.1 AT4g16650/dl4350w {... 231 6e-61
CB893607 similar to PIR|E84799|E84 similar to axi 1 protein from... 144 1e-53
TC83237 similar to GP|17065372|gb|AAL32840.1 Similar to auxin-in... 206 1e-53
BI308901 similar to PIR|C84425|C84 similar to axi 1 protein from... 179 1e-45
TC89187 similar to GP|22267609|gb|AAM94943.1 growth regulator-re... 164 7e-41
TC83319 similar to PIR|G86357|G86357 Similar to auxin-independen... 91 1e-38
TC81913 similar to GP|14517444|gb|AAK62612.1 AT5g35570/K2K18_1 {... 150 1e-36
TC80247 similar to PIR|C86476|C86476 protein F15O4.45 [imported]... 149 2e-36
TC91919 similar to PIR|C84425|C84425 similar to axi 1 protein fr... 147 8e-36
AW689665 similar to PIR|C84425|C84 similar to axi 1 protein from... 144 6e-35
TC78479 homologue to PIR|T06805|T06805 RT17-1 protein homolog - ... 107 3e-32
TC90613 similar to GP|6006861|gb|AAF00637.1| putative auxin-inde... 132 4e-31
TC91778 similar to GP|20856498|gb|AAM26669.1 AT4g16650/dl4350w {... 120 2e-29
TC87110 similar to PIR|T02405|T02405 Nicotiana tabacum axi1 prot... 113 1e-25
AJ388792 similar to PIR|T51403|T51 hypothetical protein F14F8_12... 113 1e-25
AL377772 similar to GP|22136282|gb unknown protein {Arabidopsis ... 106 2e-23
TC78478 similar to PIR|T06805|T06805 RT17-1 protein homolog - ga... 105 3e-23
>TC82843 similar to PIR|A44226|A44226 auxin-independent growth promoter -
common tobacco, partial (56%)
Length = 1096
Score = 446 bits (1146), Expect = e-125
Identities = 211/336 (62%), Positives = 266/336 (78%), Gaps = 1/336 (0%)
Frame = +2
Query: 86 SDFANIFDVNWFINYLAKDVTIVKRVPDKVMRSMDKPPYTMRVPRKSDPEYYLDQVLPIL 145
S+F+ IFDV+WF +YL+ DV I+K++P R Y++RVPRK Y++++LP+L
Sbjct: 5 SNFSEIFDVDWFASYLSNDVKIIKQLPSSKGRKA-LSAYSLRVPRKCSERCYINRILPVL 181
Query: 146 LRRRVLQLTKFDYRLANDLDDELQKLRCRVNYHALRFTKPIRQLGQRIVMRMRKMANRYI 205
+++R +QL KFDYRLAN LD E QKLRCRVNYHALRFT PI ++GQ++V RMR YI
Sbjct: 182 VKKRAVQLNKFDYRLANKLDTEYQKLRCRVNYHALRFTDPILKMGQQLVQRMRMRKKHYI 361
Query: 206 AVHLRFEPDMLAFSGCYFGGGEKERQELGEIRKRWTTLPDLSPDGERKRGKCPLTPHEVG 265
A+HLRFEPDMLAFSGC +GGGEKE +ELG IR+RW TL +PD R++G+CPLTP EVG
Sbjct: 362 ALHLRFEPDMLAFSGCDYGGGEKEHKELGAIRRRWKTLHKSNPDRARRQGRCPLTPEEVG 541
Query: 266 LMLRALGYTNDTYLYVASGEIYGGDETMQPLRDLFPNIYTKEMLA-EEELKPFLSFSSRL 324
LMLRALGY +D ++YVASGE+Y GDET+ PL+ LFPN ++KE +A +EEL+PF SFSSR+
Sbjct: 542 LMLRALGYGSDVHIYVASGEVYRGDETLAPLKALFPNFHSKETIATKEELEPFSSFSSRM 721
Query: 325 AAVDYIVCDESNVFVANNNGNMARILAGQRRYMGHKRTIRPNAKKLSALFMARHEMDWDT 384
AA+D+IVCDES+VFV NNNGNMA+ILAG+RRY GHK TIRPNAKKL LF+ R WD
Sbjct: 722 AALDFIVCDESDVFVTNNNGNMAKILAGRRRYFGHKPTIRPNAKKLYRLFLNRSNSTWDV 901
Query: 385 FSRKVKACQRGFMGEPGEMKAGRGEFHEYPSTCVCE 420
F+ V+ Q+GFMGEP E++ GRG FHE PSTC+CE
Sbjct: 902 FASSVRTFQKGFMGEPKEVRPGRGGFHENPSTCICE 1009
>TC89217 similar to PIR|E84799|E84799 similar to axi 1 protein from
Nicotiana tabacum [imported] - Arabidopsis thaliana,
partial (52%)
Length = 1375
Score = 256 bits (655), Expect = 1e-68
Identities = 144/331 (43%), Positives = 203/331 (60%), Gaps = 5/331 (1%)
Frame = +1
Query: 9 DIWESQYSKYYYGCKERGRHFYPAIRERMSNGYLLIAASGGLNQQRTGITDAVVVARILN 68
+IW S YY C R + ++ +NGYLL+ A+GGLNQ RTGI D V VA+I+N
Sbjct: 397 EIWMKPNSDKYYQCVSRPXN--RMMKPSKTNGYLLVHANGGLNQMRTGICDMVAVAKIMN 570
Query: 69 ATLVVPELDHNSFWKDDSDFANIFDVNWFINYLAKDVTIVKRVPDKVMRSMDKPPYTMRV 128
ATLV+P LDH+SFW D SDF +IFD F+ L +D+ IV+ +P ++ P
Sbjct: 571 ATLVLPSLDHDSFWTDPSDFKDIFDWRLFMKVLKEDIDIVEYLP---LQYASVKPIVKAP 741
Query: 129 PRKSDPEYYLDQVLPILLRRRVLQLTKFDYRLAND-LDDELQKLRCRVNYHALRFTKPIR 187
S YY ++LP+L R +V+Q T D RLAN+ L +QKLRCR NY AL++T I
Sbjct: 742 VSWSKASYYRSEILPMLKRHKVVQFTHTDSRLANNGLASSIQKLRCRANYQALKYTVEIE 921
Query: 188 QLGQRIVMRMRKMANRYIAVHLRFEPDMLAFSGCYFGGGEKERQELGEIR---KRWTTLP 244
+LG+ +V R+R +IA+HLR+E DMLAF+GC +E +EL +R K W
Sbjct: 922 ELGKTLVDRLRNNDEPFIALHLRYEKDMLAFTGCNHNLTIEEAEELRVMRYEVKHWKE-K 1098
Query: 245 DLSPDGERKRGKCPLTPHEVGLMLRALGYTNDTYLYVASGEIYGGDETMQPLRDLFPNIY 304
++ R +G CP++P E + L+A+GY T +Y+ +G IYGG+ +M R +PN++
Sbjct: 1099EIDSVDRRLQGGCPMSPREAAIFLKAMGYPATTTIYIVAGPIYGGN-SMAAFRAEYPNVF 1275
Query: 305 TKEMLA-EEELKPFLSFSSRLAAVDYIVCDE 334
T LA EEEL+PF + +RLAA+DYIV E
Sbjct: 1276THSTLATEEELEPFKPYQNRLAALDYIVALE 1368
>CB895020 similar to PIR|G86357|G86 Similar to auxin-independent growth
promoter [imported] - Arabidopsis thaliana, partial
(44%)
Length = 812
Score = 231 bits (588), Expect = 6e-61
Identities = 125/267 (46%), Positives = 173/267 (63%), Gaps = 3/267 (1%)
Frame = +2
Query: 38 SNGYLLIAASGGLNQQRTGITDAVVVARILNATLVVPELDHNSFWKDDSDFANIFDVNWF 97
S GYLL+ GGLNQ R+GI D V VARI+NATLV+PELD SFW+D S+F+++FD F
Sbjct: 8 SRGYLLVHTHGGLNQMRSGICDMVAVARIINATLVIPELDKRSFWQDTSNFSDVFDEEHF 187
Query: 98 INYLAKDVTIVKRVPDKVMRSMDKPPYTMRVPRKSDPEYYLDQVLPILLRRRVLQLTKFD 157
IN LA DV I+K++P +++ + + S +YY +++ + V++ +K D
Sbjct: 188 INSLANDVKIIKKLPIELVMVNETGMVKQQFRSWSGMDYYENEIARLWEDHEVIRASKSD 367
Query: 158 YRLA-NDLDDELQKLRCRVNYHALRFTKPIRQLGQRIVMRMRKMANRYIAVHLRFEPDML 216
RLA N+L ++QKLRCR Y ALRF+ I Q+G+ +V RMR YIA+HLR+E DML
Sbjct: 368 SRLANNNLPPDIQKLRCRACYEALRFSPRIEQIGKLLVERMRS-RGPYIALHLRYEKDML 544
Query: 217 AFSGCYFGGGEKERQELGEIRKR--WTTLPDLSPDGERKRGKCPLTPHEVGLMLRALGYT 274
AFSGC E +EL IR+ + + D+ P +R +G CPLTP EVG+ L ALGY
Sbjct: 545 AFSGCTHDLSLDEAEELRIIRENISYWKVKDIDPVEQRSKGFCPLTPKEVGIFLTALGYP 724
Query: 275 NDTYLYVASGEIYGGDETMQPLRDLFP 301
+ T +Y+A+GEIYGG+ M LR +P
Sbjct: 725 SKTPIYIAAGEIYGGESHMAELRSRYP 805
>TC89607 similar to GP|20856498|gb|AAM26669.1 AT4g16650/dl4350w {Arabidopsis
thaliana}, partial (22%)
Length = 862
Score = 231 bits (588), Expect = 6e-61
Identities = 105/130 (80%), Positives = 120/130 (91%)
Frame = +3
Query: 297 RDLFPNIYTKEMLAEEELKPFLSFSSRLAAVDYIVCDESNVFVANNNGNMARILAGQRRY 356
++LFPNIYTKEMLA+EELKPFL FSSRLAAVDYIVCDES+VFV NNNGNMA+ILAG+RRY
Sbjct: 9 KNLFPNIYTKEMLADEELKPFLPFSSRLAAVDYIVCDESDVFVTNNNGNMAKILAGRRRY 188
Query: 357 MGHKRTIRPNAKKLSALFMARHEMDWDTFSRKVKACQRGFMGEPGEMKAGRGEFHEYPST 416
MGHKRTIRPNAKKLS LF RH+MDW TF+RKVKACQRGFMGEP EM+ GR + HE+PS+
Sbjct: 189 MGHKRTIRPNAKKLSTLFAGRHQMDWHTFARKVKACQRGFMGEPDEMRPGRDDHHEFPSS 368
Query: 417 CVCEKPFIDE 426
CVCE+P++DE
Sbjct: 369 CVCERPYVDE 398
>CB893607 similar to PIR|E84799|E84 similar to axi 1 protein from Nicotiana
tabacum [imported] - Arabidopsis thaliana, partial (45%)
Length = 943
Score = 144 bits (364), Expect(2) = 1e-53
Identities = 81/208 (38%), Positives = 121/208 (57%), Gaps = 4/208 (1%)
Frame = +1
Query: 87 DFANIFDVNWFINYLAKDVTIVKRVPDKVMRSMDKPPYTMRVPRKSDPEYYLDQVLPILL 146
DF +IFD F+ L +D+ IV+ +P ++ P S YY ++LP+L
Sbjct: 319 DFKDIFDWRLFMKVLKEDIDIVEYLP---LQYASVKPIVKAPVSWSKASYYRSEILPMLK 489
Query: 147 RRRVLQLTKFDYRLAND-LDDELQKLRCRVNYHALRFTKPIRQLGQRIVMRMRKMANRYI 205
R +V+Q T D RLAN+ L +QKLRCR NY AL++T I +LG+ +V R+R +I
Sbjct: 490 RHKVVQFTHTDSRLANNGLASSIQKLRCRANYQALKYTVEIEELGKTLVDRLRNNDEPFI 669
Query: 206 AVHLRFEPDMLAFSGCYFGGGEKERQELGEIR---KRWTTLPDLSPDGERKRGKCPLTPH 262
A+HLR+E DMLAF+GC +E +EL +R K W ++ R +G CP++P
Sbjct: 670 ALHLRYEKDMLAFTGCNHNLTIEEAEELRVMRYEVKHWKE-KEIDSVDRRLQGGCPMSPR 846
Query: 263 EVGLMLRALGYTNDTYLYVASGEIYGGD 290
E + L+A+GY T +Y+ +G IYGG+
Sbjct: 847 EAAIFLKAMGYPCTTTIYIVAGPIYGGN 930
Score = 84.0 bits (206), Expect(2) = 1e-53
Identities = 41/76 (53%), Positives = 52/76 (67%)
Frame = +3
Query: 9 DIWESQYSKYYYGCKERGRHFYPAIRERMSNGYLLIAASGGLNQQRTGITDAVVVARILN 68
+IW S YY C R R+ ++ +NGYLL+ A+GGLNQ RTGI D V VA+I+N
Sbjct: 63 EIWMKPNSDKYYQCVSRPRN--RMMKPSKTNGYLLVHANGGLNQMRTGICDMVAVAKIMN 236
Query: 69 ATLVVPELDHNSFWKD 84
ATLV+P LDH+SFW D
Sbjct: 237 ATLVLPSLDHDSFWTD 284
>TC83237 similar to GP|17065372|gb|AAL32840.1 Similar to auxin-independent
growth promoter (axi 1) {Arabidopsis thaliana}, partial
(60%)
Length = 1188
Score = 206 bits (525), Expect = 1e-53
Identities = 119/278 (42%), Positives = 167/278 (59%), Gaps = 3/278 (1%)
Frame = +2
Query: 9 DIWESQYSKYYYGCKERGRHFYPAIRERMSNGYLLIAASGGLNQQRTGITDAVVVARILN 68
++W + S + H+ P + +NGYL + +GGLNQQRT I++AV+ ARI+N
Sbjct: 338 ELWSNADSSGWRPSSSPRSHWPPPPSK--NNGYLRVRCNGGLNQQRTAISNAVLAARIMN 511
Query: 69 ATLVVPELDHNSFWKDDSDFANIFDVNWFINYLAKDVTIVKRVPDKVMRSMDK--PPYTM 126
ATLV+PELD NSFW DDS F I+DV FI L DV IV+ +P+ K + +
Sbjct: 512 ATLVLPELDANSFWHDDSGFHGIYDVEHFIRTLRFDVKIVESIPENEKSGKKKKLKAFQI 691
Query: 127 RVPRKSDPEYYLDQVLPILLRRRVLQLTKFDYRLANDLDD-ELQKLRCRVNYHALRFTKP 185
R PR + +Y L + + LT F +RLA ++D+ E Q+LRCRVNYHALRF
Sbjct: 692 RPPRDAPISWYTTDSLKKMKEHGAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPH 871
Query: 186 IRQLGQRIVMRMRKMANRYIAVHLRFEPDMLAFSGCYFGGGEKERQELGEIRKRWTTLPD 245
I +L Q IV ++R ++++HLRFE DML+F+GC+ +E++ L + R+
Sbjct: 872 IMKLSQSIVDKLRAQ-GPFMSIHLRFEMDMLSFAGCFDIFTPEEQKILKKYREENFAPKK 1048
Query: 246 LSPDGERKRGKCPLTPHEVGLMLRALGYTNDTYLYVAS 283
L + R GKCPLTP EVGL+LRALG+ N T +Y S
Sbjct: 1049LVYNERRAIGKCPLTPEEVGLILRALGFDNSTRIYSCS 1162
>BI308901 similar to PIR|C84425|C84 similar to axi 1 protein from Nicotiana
tabacum [imported] - Arabidopsis thaliana, partial (41%)
Length = 725
Score = 179 bits (455), Expect(2) = 1e-45
Identities = 90/208 (43%), Positives = 134/208 (64%), Gaps = 7/208 (3%)
Frame = +3
Query: 39 NGYLLIAASGGLNQQRTGITDAVVVARILNATLVVPELDHNSFWKDDSDFANIFDVNWFI 98
NGY+ + A+GGLNQQR I +AV VA LNATLV+P ++S WKD S F++I+D +F+
Sbjct: 12 NGYIYVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWKDPSKFSDIYDEEYFV 191
Query: 99 NYLAKDVTIVKRVPDKVMR---SMDKPPYTMRVPRKSDPEYYLDQVLPILLRRRVLQLTK 155
N L DV +V+++P+ +M S + R+ S +YY D VLP L +V++++
Sbjct: 192 NTLKNDVQMVEKIPEHLMERFGSNMTNVFNFRIKAMSSIQYYRDVVLPKLFEEQVIRISP 371
Query: 156 FDYRLANDLDDELQKLRCRVNYHALRFTKPIRQLGQRIVMRMRKMA----NRYIAVHLRF 211
F RL+ D +Q+LRC NY ALRF+ PI L + ++ RMRK + +Y+++HLRF
Sbjct: 372 FANRLSYDAPPAVQRLRCLANYEALRFSSPILTLAESLIARMRKQSIKNGGKYVSIHLRF 551
Query: 212 EPDMLAFSGCYFGGGEKERQELGEIRKR 239
E DM+AFS C F GG++ER ++ R+R
Sbjct: 552 EEDMVAFSCCVFDGGKEERDDMIAARER 635
Score = 21.9 bits (45), Expect(2) = 1e-45
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 255 GKCPLTPHE 263
GKCPLTP E
Sbjct: 698 GKCPLTPLE 724
>TC89187 similar to GP|22267609|gb|AAM94943.1 growth regulator-related
protein {Arabidopsis thaliana}, partial (44%)
Length = 1501
Score = 164 bits (415), Expect = 7e-41
Identities = 89/179 (49%), Positives = 117/179 (64%), Gaps = 9/179 (5%)
Frame = +3
Query: 205 IAVHLRFEPDMLAFSGCYFGGGEKERQELGEIRKR-WTTLPD-----LSPDGERKRGKCP 258
IAVHLRFE DM+AFS C + GG+ E+ E+ R+R W + PD R GKCP
Sbjct: 6 IAVHLRFEEDMVAFSCCIYDGGKAEKLEMDSARERGWRGKFKRKGRIVVPDLYRVNGKCP 185
Query: 259 LTPHEVGLMLRALGYTNDTYLYVASGEIYGGDETMQPLRDLFPNIYTKEMLA-EEELKPF 317
LTP EVG+MLR +G+ N T +Y+ASG+IY ++ + PL +FPN+YTKE LA +EL PF
Sbjct: 186 LTPLEVGMMLRGMGFNNSTSIYLASGKIYHAEKYLAPLIKMFPNLYTKESLATTDELAPF 365
Query: 318 LSFSSRLAAVDYIVCDESNVFVANNNGNMARILAGQRRYM--GHKRTIRPNAKKLSALF 374
+ +SS+LAA+DY VC S VFV GN L G RR++ GH +TI P+ +KL LF
Sbjct: 366 MGYSSQLAALDYTVCLFSEVFVTTQGGNFPHFLMGHRRFLYGGHAKTIIPDKRKLVVLF 542
>TC83319 similar to PIR|G86357|G86357 Similar to auxin-independent growth
promoter [imported] - Arabidopsis thaliana, partial
(38%)
Length = 1113
Score = 90.9 bits (224), Expect(2) = 1e-38
Identities = 42/74 (56%), Positives = 55/74 (73%)
Frame = +3
Query: 38 SNGYLLIAASGGLNQQRTGITDAVVVARILNATLVVPELDHNSFWKDDSDFANIFDVNWF 97
S GYLL+ +GGLNQ R GI D V +ARI+NATLV+PELD SFW+D S F++IFD F
Sbjct: 396 SQGYLLVHTNGGLNQMRAGICDMVAIARIINATLVIPELDKKSFWQDSSIFSDIFDEKRF 575
Query: 98 INYLAKDVTIVKRV 111
I+ LA D+ I+ ++
Sbjct: 576 ISSLADDIKIINKL 617
Score = 87.4 bits (215), Expect(2) = 1e-38
Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
Frame = +1
Query: 132 SDPEYYLDQVLPILLRRRVLQLTKFDYRLAND-LDDELQKLRCRVNYHALRFTKPIRQLG 190
S +YY +++ + +V+Q +K D RLAN+ L ++QKLRCR Y ALRF+ I Q+G
Sbjct: 670 SGMDYYQNEIAALWDNFKVIQASKSDSRLANNHLPQDIQKLRCRACYEALRFSPRIEQMG 849
Query: 191 QRIVMRMRKMANRYIAVHLRFEPDMLAFSGCYFGGGEKERQELGEIRKRWTTLPDLSPDG 250
+ +V RMR YI +HLR+E DMLAFSGC E +EL IR+ T D
Sbjct: 850 KILVERMRSY-GPYITLHLRYEKDMLAFSGCTHDLSTSEAKELRIIRENTTYWKRKHIDP 1026
Query: 251 ERKRGKCPLTPHEVG 265
+ + G+ L+ + G
Sbjct: 1027KEEEGQRVLSLNSKG 1071
>TC81913 similar to GP|14517444|gb|AAK62612.1 AT5g35570/K2K18_1 {Arabidopsis
thaliana}, partial (51%)
Length = 1062
Score = 150 bits (378), Expect = 1e-36
Identities = 80/199 (40%), Positives = 121/199 (60%), Gaps = 1/199 (0%)
Frame = +3
Query: 9 DIWESQYSKYYYGCKERGRHFYPAIRERMSNGYLLIAASGGLNQQRTGITDAVVVARILN 68
++W S+ + C + R+ + + +NGY+L+ A+GGLNQ R GI D V VA+I+
Sbjct: 51 EVWSKPNSENFTQCIDLSRNH--KMLDAKTNGYILVNANGGLNQMRFGICDMVAVAKIMK 224
Query: 69 ATLVVPELDHNSFWKDDSDFANIFDVNWFINYLAKDVTIVKRVPDKVMRSMDKPPYTMRV 128
ATLV+P LDH S+W D S F ++FD FI+ L DV IV+ +P + P++
Sbjct: 225 ATLVLPSLDHTSYWADQSGFKDLFDWKHFIDTLKDDVHIVETLPPTY---AEIHPFSKTP 395
Query: 129 PRKSDPEYYLDQVLPILLRRRVLQLTKFDYRLAND-LDDELQKLRCRVNYHALRFTKPIR 187
S YY +VLP+L + +V+ T D RLAN+ + +QKLRCRVNY ALR++ P+
Sbjct: 396 ISWSKVPYYKTEVLPLLNQHKVIYFTHTDSRLANNGIPKSIQKLRCRVNYRALRYSAPVE 575
Query: 188 QLGQRIVMRMRKMANRYIA 206
+ G ++V RM++ N Y+A
Sbjct: 576 EFGNKLVSRMQQNGNPYLA 632
Score = 111 bits (278), Expect = 5e-25
Identities = 63/165 (38%), Positives = 99/165 (59%), Gaps = 3/165 (1%)
Frame = +1
Query: 186 IRQLGQRIVMRMRKMANRYIAVHLRFEPDMLAFSGCYFGGGEKERQELGEIRKRWTTLPD 245
++ L + +M + +HLR+E DMLAF+GC +E +EL ++R +
Sbjct: 571 LKNLETNWYLECSRMEILILPLHLRYEKDMLAFTGCSHSLTAEEDEELRQMRYEVGHWKE 750
Query: 246 LSPDGERKR--GKCPLTPHEVGLMLRALGYTNDTYLYVASGEIYGGDETMQPLRDLFPNI 303
+G +R G CPLTP E L+LRALG+ + T +Y+ +GE YG +M+ L+D FPNI
Sbjct: 751 KEINGTERRLLGGCPLTPRETSLLLRALGFPSHTRIYLVAGEAYGRG-SMKYLKDDFPNI 927
Query: 304 YTKEML-AEEELKPFLSFSSRLAAVDYIVCDESNVFVANNNGNMA 347
++ L +E+EL PF + + LA +DY+V +S+VF+ +GNMA
Sbjct: 928 FSHSSLSSEDELNPFKNHQNMLAGIDYVVALQSDVFLYTYDGNMA 1062
>TC80247 similar to PIR|C86476|C86476 protein F15O4.45 [imported] -
Arabidopsis thaliana, partial (29%)
Length = 1225
Score = 149 bits (377), Expect = 2e-36
Identities = 79/169 (46%), Positives = 109/169 (63%), Gaps = 3/169 (1%)
Frame = +3
Query: 38 SNGYLLIAASGGLNQQRTGITDAVVVARILNATLVVPELDHNSFWKDDSDFANIFDVNWF 97
SNGYL+I A+GGLNQQR I DAV VA +LNATLV+P NS W+D S F +IFD N+F
Sbjct: 714 SNGYLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSHFGDIFDENFF 893
Query: 98 INYLAKDVTIVKRVPDKVMRSMD---KPPYTMRVPRKSDPEYYLDQVLPILLRRRVLQLT 154
I L K V +V+ +PD +++ D +RV S P +YL +VLP LL R +++
Sbjct: 894 IQSLGKHVQVVRELPDDILQQFDNNISNIVNLRVKAWSSPAHYLKKVLPQLLEMRAVRIA 1073
Query: 155 KFDYRLANDLDDELQKLRCRVNYHALRFTKPIRQLGQRIVMRMRKMANR 203
F RLA + ++Q LRC N+ ALRF++PIR L + +V RM K +++
Sbjct: 1074PFSNRLAQSVPSKIQGLRCFANFGALRFSEPIRTLAESMVDRMVKHSSQ 1220
>TC91919 similar to PIR|C84425|C84425 similar to axi 1 protein from
Nicotiana tabacum [imported] - Arabidopsis thaliana,
partial (31%)
Length = 1210
Score = 147 bits (371), Expect = 8e-36
Identities = 79/183 (43%), Positives = 111/183 (60%), Gaps = 4/183 (2%)
Frame = +2
Query: 248 PDGERKRGKCPLTPHEVGLMLRALGYTNDTYLYVASGEIYGGDETMQPLRDLFPNIYTKE 307
P R GKCPLTP EVGLMLR +G+T +T +++ASG IY ++TM PL +FPN++TKE
Sbjct: 2 PGAIRINGKCPLTPLEVGLMLRGMGFTKNTSIFLASGIIYNAEKTMAPLLQMFPNLHTKE 181
Query: 308 MLA-EEELKPFLSFSSRLAAVDYIVCDESNVFVANNNGNMARILAGQRRYM--GHKRTIR 364
LA EEEL F ++SSR+AA+DY VC S VFV GN L G RRY+ GH +TI+
Sbjct: 182 TLASEEELSTFRNYSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLLGHRRYLYGGHSKTIK 361
Query: 365 PNAKKLSALFMARHEMDWDTFSRKVKACQRGFMGEPGEMKAGRGEFHEYP-STCVCEKPF 423
P+ +KL+ LF + W +F R++ + + E+K + +P C+C
Sbjct: 362 PDKRKLALLF-DNPNIGWRSFKRQLLNMRSHSDSKGVELKRPNDSIYSFPCPECMCRANR 538
Query: 424 IDE 426
D+
Sbjct: 539 TDD 547
>AW689665 similar to PIR|C84425|C84 similar to axi 1 protein from Nicotiana
tabacum [imported] - Arabidopsis thaliana, partial (39%)
Length = 675
Score = 144 bits (364), Expect = 6e-35
Identities = 79/198 (39%), Positives = 115/198 (57%), Gaps = 8/198 (4%)
Frame = +1
Query: 10 IWESQYSKYYYGCKERGRHFYPAIRERM-----SNGYLLIAASGGLNQQRTGITDAVVVA 64
IW S Y RG + P + SNGY+ + A+GGLNQQRT + +AV VA
Sbjct: 82 IWRSPY---------RGGEWKPCVNRSSEGLPESNGYIYVEANGGLNQQRTSVCNAVAVA 234
Query: 65 RILNATLVVPELDHNSFWKDDSDFANIFDVNWFINYLAKDVTIVKRVPDKVMR---SMDK 121
LNATLV+P ++S WKD S F +I+D +F++ L DV +V ++P+ +M S
Sbjct: 235 GYLNATLVIPNFHYHSIWKDPSKFRDIYDEEYFVDILKNDVRVVDKIPEYLMERFGSNMT 414
Query: 122 PPYTMRVPRKSDPEYYLDQVLPILLRRRVLQLTKFDYRLANDLDDELQKLRCRVNYHALR 181
+ R+ S +YY D VLP LL +V++++ F RL+ D +Q+LRC NY ALR
Sbjct: 415 NVHNFRIKAWSSIQYYRDVVLPKLLEEKVIRISPFANRLSFDAPPVVQRLRCLANYEALR 594
Query: 182 FTKPIRQLGQRIVMRMRK 199
F+ PI +G+ +V RMR+
Sbjct: 595 FSSPILTIGESLVERMRE 648
>TC78479 homologue to PIR|T06805|T06805 RT17-1 protein homolog - garden pea,
partial (60%)
Length = 789
Score = 107 bits (266), Expect(4) = 3e-32
Identities = 61/149 (40%), Positives = 90/149 (59%), Gaps = 9/149 (6%)
Frame = +3
Query: 59 DAVVVARILNATLVVPELDHNSFWKDDSDFANIFDVNWFINYLAKDVTIVKRVPDKVMRS 118
D V VA+ILNATLV+P L+ N WKD S F +IFDV+ FI+ L DV+IVK +P++ S
Sbjct: 69 DGVAVAKILNATLVIPYLELNPVWKDSSSFEDIFDVDHFIDVLKDDVSIVKELPEEYSWS 248
Query: 119 MDKPPYTMRV--------PRKSDPEYYLDQVLPILLRRRVLQLTKFDYRLAND-LDDELQ 169
+ Y + + P + +YL+ VLP+L V ++ F +RL+ D + ++Q
Sbjct: 249 -SREYYALAIRDTRIKAAPVHATANWYLENVLPVLQSYGVAAISPFSHRLSFDNVPMDIQ 425
Query: 170 KLRCRVNYHALRFTKPIRQLGQRIVMRMR 198
LRC+VN+ AL F IR LG ++ R+R
Sbjct: 426 HLRCKVNFQALDFVPHIRALGDSLISRLR 512
Score = 39.3 bits (90), Expect(4) = 3e-32
Identities = 15/29 (51%), Positives = 21/29 (71%)
Frame = +1
Query: 199 KMANRYIAVHLRFEPDMLAFSGCYFGGGE 227
KM +++ +HLRF+ DM A S C FGGG+
Sbjct: 583 KMQGKFVGLHLRFDKDMAAHSACDFGGGK 669
Score = 27.3 bits (59), Expect(4) = 3e-32
Identities = 11/19 (57%), Positives = 13/19 (67%)
Frame = +1
Query: 38 SNGYLLIAASGGLNQQRTG 56
S GY+ + GGLNQQR G
Sbjct: 19 SEGYIQVFLDGGLNQQRMG 75
Score = 23.1 bits (48), Expect(4) = 3e-32
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 251 ERKRGKCPLTP 261
E+ RG+CP+TP
Sbjct: 755 EKVRGRCPMTP 787
>TC90613 similar to GP|6006861|gb|AAF00637.1| putative auxin-independent
growth promoter protein {Arabidopsis thaliana}, partial
(40%)
Length = 817
Score = 132 bits (331), Expect = 4e-31
Identities = 87/270 (32%), Positives = 140/270 (51%), Gaps = 15/270 (5%)
Frame = +3
Query: 27 RHFYPAIRERMSNGYLLIAASGGLNQQRTGITDAVVVARILNATLVVPELDHNSFWKDDS 86
R Y +E+ +NG++ GG R+ I D V ++R+LNATLV+PE + K S
Sbjct: 9 RSNYTGPKEK-NNGFIYAKVFGGFANIRSSIPDLVAISRLLNATLVIPEFQESLRSKGVS 185
Query: 87 ----DFANIFDVNWFINYLAKDVTIVKRVPDKVMRSMDKPPY-TMRVPRKSDPEYYLDQV 141
F+ ++D FI YL KDV I K +P +M + + T R S P +Y+ ++
Sbjct: 186 PMFKSFSYLYDEEQFIAYLKKDVIIAKTLPGSLMERRKRNEFPTFRPKSSSSPNFYIQEI 365
Query: 142 LPILLRRRVLQLTKFD----YRLANDLDDELQKLRCRVNYHALRFTKPIRQLGQRIVMRM 197
LP L + +V+ L + + E+Q+LRCRV++ AL+F I+ LG R+V ++
Sbjct: 366 LPKLKKSKVIGLIIANGGALQSVLPPTMAEIQRLRCRVSFQALQFRPEIQMLGHRMVNKL 545
Query: 198 RKMANRYIAVHLRFEPDMLAFSGC--YFGGGEKE--RQELGEIRKRWTTLPDLSPDG--E 251
R + ++A H + LA++GC F E + ++ K DL+ D
Sbjct: 546 RSLGQPFLAYHPGLLRETLAYNGCAELFQDVHTELIQHRRAQMIKDKILNEDLNVDSHLR 725
Query: 252 RKRGKCPLTPHEVGLMLRALGYTNDTYLYV 281
R +G CPL P EVG++L +GY + T +Y+
Sbjct: 726 RDKGLCPLMPEEVGILLPVMGYPSKTIIYL 815
>TC91778 similar to GP|20856498|gb|AAM26669.1 AT4g16650/dl4350w {Arabidopsis
thaliana}, partial (14%)
Length = 723
Score = 120 bits (301), Expect(2) = 2e-29
Identities = 59/81 (72%), Positives = 67/81 (81%)
Frame = +3
Query: 1 DGNDHAPIDIWESQYSKYYYGCKERGRHFYPAIRERMSNGYLLIAASGGLNQQRTGITDA 60
DG+ APIDIW+S+ SKYYY C +RGR + PA+RE+MSNGYLLIAASGGLNQQRTGITDA
Sbjct: 465 DGHYRAPIDIWKSKLSKYYYECSDRGRDYAPAVREQMSNGYLLIAASGGLNQQRTGITDA 644
Query: 61 VVVARILNATLVVPELDHNSF 81
V VA ILNATLV P L + F
Sbjct: 645 VXVAXILNATLVGPXLGSSFF 707
Score = 26.6 bits (57), Expect(2) = 2e-29
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1
Query: 77 DHNSFWKDDS 86
DH+SFWKDDS
Sbjct: 694 DHHSFWKDDS 723
>TC87110 similar to PIR|T02405|T02405 Nicotiana tabacum axi1 protein homolog
[imported] - Arabidopsis thaliana, partial (36%)
Length = 857
Score = 113 bits (283), Expect = 1e-25
Identities = 74/198 (37%), Positives = 110/198 (55%), Gaps = 5/198 (2%)
Frame = +3
Query: 251 ERKR-GKCPLTPHEVGLMLRALGYTNDTYLYVASGEIYGGDETMQPLRDLFPNIYTKEML 309
ERK G CPLT +V +L+ALG D +Y A G+ GG E + PL FP++Y KE L
Sbjct: 114 ERKMAGLCPLTAMDVTRLLKALGAQKDARIYWAGGQPLGGKEALHPLIHEFPHLYNKEDL 293
Query: 310 A-EEELKPFLSFSSRLAAVDYIVCDESNVFVANNNGNMARILAGQRRYMGHKRTIRPNAK 368
A EL+PF +S +AA+DYIV ++S+VF+ ++ GNM L G R Y GHK+ I PN +
Sbjct: 294 ALPGELEPFAKKASLMAAIDYIVSEKSDVFMPSHGGNMGHALQGHRAYAGHKKYITPNKR 473
Query: 369 KLSALFMARHEMDWDTFSRKVKACQRGFMGEP--GEMKAGRGEFHEYP-STCVCEKPFID 425
++ F+ + F+ VK + +G+P K GR + +YP C+C D
Sbjct: 474 QMHPYFL-NPSLPEAEFNSIVKELHQNSLGQPELRTSKVGR-DVTKYPVPECMCNDSHND 647
Query: 426 ELSEDGIRPPKLAFRNLT 443
S+ I+ ++N+T
Sbjct: 648 S*SK--IQCQSFWYKNIT 695
>AJ388792 similar to PIR|T51403|T51 hypothetical protein F14F8_120 -
Arabidopsis thaliana, partial (29%)
Length = 595
Score = 113 bits (283), Expect = 1e-25
Identities = 62/152 (40%), Positives = 99/152 (64%), Gaps = 2/152 (1%)
Frame = +3
Query: 84 DDSDFANIFDVNWFINYLAKDVTIVKRVPDKVMRSMDKP-PYTMRVPRKSDPEYYLDQVL 142
D S+F +IFD++ FI L +V I+K +P ++ + ++ Y+M SD YY +Q+L
Sbjct: 6 DPSEFQDIFDLDHFITSLRDEVRILKELPPRLKQKVENGFLYSMPPISWSDMSYYKNQIL 185
Query: 143 PILLRRRVLQLTKFDYRLANDLDD-ELQKLRCRVNYHALRFTKPIRQLGQRIVMRMRKMA 201
P++ + +V+ L + D RLAN+ E+QKLRCRVN+ ALRFT I +LG++++ +R+
Sbjct: 186 PLIQKYKVVHLNRTDARLANNGQSIEIQKLRCRVNFSALRFTPQIEELGRKVINLLRQ-N 362
Query: 202 NRYIAVHLRFEPDMLAFSGCYFGGGEKERQEL 233
++ +HLR+E DMLAFSGC G + +EL
Sbjct: 363 GPFLVLHLRYEMDMLAFSGCTQGATVTQVEEL 458
>AL377772 similar to GP|22136282|gb unknown protein {Arabidopsis thaliana},
partial (29%)
Length = 445
Score = 106 bits (264), Expect = 2e-23
Identities = 61/145 (42%), Positives = 89/145 (61%), Gaps = 5/145 (3%)
Frame = +2
Query: 207 VHLRFEPDMLAFSGCYFGGGEKERQELGEIRK---RWTTLPDLSPDGE-RKRGKCPLTPH 262
+HLRF DM A S C FGGG+ E+ L + R+ + L D E R +G+CPLTP
Sbjct: 2 LHLRFYKDMAAHSACDFGGGKAEKLALAKYRQVIWQGRVLNSQFNDEELRNQGRCPLTPE 181
Query: 263 EVGLMLRALGYTNDTYLYVASGEIYGGDETMQPLRDLFPNIYTKE-MLAEEELKPFLSFS 321
E+GL+L ALG+ N T LY+AS ++YGG ++ L LFP + K+ +++ E + +
Sbjct: 182 EIGLLLAALGFNNRTRLYLASHKVYGGKARLETLSTLFPFMEDKKSLVSAETMAKVNGKA 361
Query: 322 SRLAAVDYIVCDESNVFVANNNGNM 346
S LAAVDY V S++F++ + GNM
Sbjct: 362 SLLAAVDYYVSMHSDIFISASPGNM 436
>TC78478 similar to PIR|T06805|T06805 RT17-1 protein homolog - garden pea,
partial (36%)
Length = 875
Score = 105 bits (263), Expect = 3e-23
Identities = 61/145 (42%), Positives = 86/145 (59%), Gaps = 8/145 (5%)
Frame = +3
Query: 9 DIWESQYSKYYYGCKERGRHFYPAIRERMSNGYLLIAASGGLNQQRTGITDAVVVARILN 68
+IW ++ + C E G P + E+ S GY+ + GGLNQQR GI DAV VA+ILN
Sbjct: 384 EIWAPLENQGWKSCDESGNR--PTLPEK-SEGYIQVFLDGGLNQQRMGICDAVAVAKILN 554
Query: 69 ATLVVPELDHNSFWKDDSDFANIFDVNWFINYLAKDVTIVKRVPDKVMRSMDKPPYTMRV 128
ATLV+P L+ N WKD S F +IFDV+ FI+ L DV+IVK +P++ S + Y + +
Sbjct: 555 ATLVIPYLELNPVWKDSSSFEDIFDVDHFIDVLKDDVSIVKELPEEYSWS-SREYYALAI 731
Query: 129 --------PRKSDPEYYLDQVLPIL 145
P + +YL+ VLP+L
Sbjct: 732 RDTRIKAAPVHATANWYLENVLPVL 806
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.322 0.140 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,817,387
Number of Sequences: 36976
Number of extensions: 175488
Number of successful extensions: 839
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of query: 467
length of database: 9,014,727
effective HSP length: 100
effective length of query: 367
effective length of database: 5,317,127
effective search space: 1951385609
effective search space used: 1951385609
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Medicago: description of AC119408.12