TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149581.3 + phase: 0 
         (194 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BP071119                                                               47  3e-06
AV780545                                                               39  6e-04
TC9669 similar to UP|Q9LQA7 (Q9LQA7) F4N2.10, partial (16%)            31  0.12
TC10887 similar to UP|Q84JJ4 (Q84JJ4) Flavonoid 3'-hydroxylase (...    28  1.4
TC8339 homologue to UP|Q84L89 (Q84L89) L-asparaginase, complete        27  1.8
TC16173 similar to GB|AAP68269.1|31711826|BT008830 At1g70320 {Ar...    26  3.9
TC10654 similar to UP|Q8S0P2 (Q8S0P2) Ribosomal protein L28-like...    26  3.9
BI418618                                                               26  5.2
TC15382 similar to UP|MSK2_MEDSA (P51138) Glycogen synthase kina...    26  5.2
TC10702                                                                26  5.2
BP032098                                                               25  6.7
TC8393 weakly similar to GB|AAM61124.1|21536792|AY084557 prenyla...    25  8.8
TC9431 weakly similar to UP|Q84UI1 (Q84UI1) Allergen len c 3.02 ...    25  8.8

>BP071119 
          Length = 412

 Score = 46.6 bits (109), Expect = 3e-06
 Identities = 26/59 (44%), Positives = 32/59 (54%)
 Frame = +2

Query: 9   AGLRWFWEPVEGFDLHDLIYTGYSTVTHAMICAMCERWHTETSSFHLLVGEMTIPLDDM 67
           AGLRW  +                +V  ++I A  ERWH ETSSFHL  GEMTI L+D+
Sbjct: 266 AGLRWVMKCTS------------PSVDQSIISAFVERWHPETSSFHLPWGEMTITLEDV 406


>AV780545 
          Length = 555

 Score = 38.9 bits (89), Expect = 6e-04
 Identities = 16/32 (50%), Positives = 24/32 (75%)
 Frame = +1

Query: 33  TVTHAMICAMCERWHTETSSFHLLVGEMTIPL 64
           ++ + +I A+ ERW  ET++FHL VGEMT+ L
Sbjct: 460 SLDNPLISALVERWRRETNTFHLNVGEMTVTL 555


>TC9669 similar to UP|Q9LQA7 (Q9LQA7) F4N2.10, partial (16%)
          Length = 472

 Score = 31.2 bits (69), Expect = 0.12
 Identities = 24/69 (34%), Positives = 35/69 (49%), Gaps = 5/69 (7%)
 Frame = -2

Query: 52  SFHL-LVGEMTIPLDDMHNLLHIPI---HGRILDHDEAMNQDCAIDL-MIRLLGMSEVDV 106
           SFHL +V  M +   ++H LLH+ +   HG +  HDE M +D  + +   R L      V
Sbjct: 366 SFHLWVVMVMKVGCSNLH-LLHVRVECFHGHLQSHDEEMEEDSCVSIENQRNLWEESQHV 190

Query: 107 RVEVRSESA 115
            +E  S SA
Sbjct: 189 DLECNSSSA 163


>TC10887 similar to UP|Q84JJ4 (Q84JJ4) Flavonoid 3'-hydroxylase (Fragment),
           partial (43%)
          Length = 703

 Score = 27.7 bits (60), Expect = 1.4
 Identities = 12/43 (27%), Positives = 23/43 (52%)
 Frame = -1

Query: 15  WEPVEGFDLHDLIYTGYSTVTHAMICAMCERWHTETSSFHLLV 57
           ++ ++GF    ++YT    + H     +   W+T TSSF L++
Sbjct: 670 FKQMQGFHTQ*ILYTPKFEIHHISPFRIFTNWYTTTSSFLLII 542


>TC8339 homologue to UP|Q84L89 (Q84L89) L-asparaginase, complete
          Length = 1467

 Score = 27.3 bits (59), Expect = 1.8
 Identities = 10/24 (41%), Positives = 18/24 (74%)
 Frame = -2

Query: 145  KLQERGRKRAIGKWSWGGMALAYL 168
            KL ++G+K+   +  WGG++LA+L
Sbjct: 1448 KLVKKGKKQKATRLFWGGLSLAFL 1377


>TC16173 similar to GB|AAP68269.1|31711826|BT008830 At1g70320 {Arabidopsis
           thaliana;}, partial (37%)
          Length = 601

 Score = 26.2 bits (56), Expect = 3.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 11  LRWFWEPVEGFDLHD 25
           ++WFWE V+GF   D
Sbjct: 93  IQWFWEVVQGFSKED 137


>TC10654 similar to UP|Q8S0P2 (Q8S0P2) Ribosomal protein L28-like, complete
          Length = 510

 Score = 26.2 bits (56), Expect = 3.9
 Identities = 21/62 (33%), Positives = 31/62 (49%), Gaps = 1/62 (1%)
 Frame = -1

Query: 68  HNLLHIPIH-GRILDHDEAMNQDCAIDLMIRLLGMSEVDVRVEVRSESAGHISYPTLKRV 126
           H +LH   H  ++L HD  +NQ C + L++  LG S+    +  RS + GH       RV
Sbjct: 366 HLILHCLSHPAKLLLHDRLVNQSCRLGLLL-*LGRSQQHRLIFARSLN-GHSLLVGQTRV 193

Query: 127 YE 128
            E
Sbjct: 192 LE 187


>BI418618 
          Length = 601

 Score = 25.8 bits (55), Expect = 5.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 117 HISYPTLKRVYEHHLTEAR 135
           HI++ TLK ++ HH TE R
Sbjct: 160 HITHQTLKDLWTHHDTETR 216


>TC15382 similar to UP|MSK2_MEDSA (P51138) Glycogen synthase kinase-3
           homolog MsK-2  , partial (17%)
          Length = 552

 Score = 25.8 bits (55), Expect = 5.2
 Identities = 10/17 (58%), Positives = 12/17 (69%)
 Frame = -2

Query: 145 KLQERGRKRAIGKWSWG 161
           KL+  GRKR  GKW +G
Sbjct: 119 KLKSGGRKRPFGKWVFG 69


>TC10702 
          Length = 593

 Score = 25.8 bits (55), Expect = 5.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 11  LRWFWEPVEGFDLHDLIYTGYSTVTHAMICAM 42
           + +FW P+E F L+   Y  ++ V   ++C +
Sbjct: 384 INFFWHPIELFQLNFCRYMLFACVLRHVVCCV 479


>BP032098 
          Length = 508

 Score = 25.4 bits (54), Expect = 6.7
 Identities = 9/19 (47%), Positives = 16/19 (83%)
 Frame = +3

Query: 121 PTLKRVYEHHLTEARRLEE 139
           PT+K +  H++T+A++LEE
Sbjct: 39  PTVKYIGGHNITQAKKLEE 95


>TC8393 weakly similar to GB|AAM61124.1|21536792|AY084557 prenylated Rab
           receptor 2 {Arabidopsis thaliana;}, partial (78%)
          Length = 1012

 Score = 25.0 bits (53), Expect = 8.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 138 EEPQTREKLQERGRKRAIGKWS 159
           +EP+ R + QERG +R I +WS
Sbjct: 702 KEPRRRRRQQERGGRRGI-RWS 640


>TC9431 weakly similar to UP|Q84UI1 (Q84UI1) Allergen len c 3.02
           (Fragment), partial (67%)
          Length = 1328

 Score = 25.0 bits (53), Expect = 8.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 134 ARRLEEPQTREKLQERGRKRAIGKW 158
           +RRLE+P  RE+++ER  +    KW
Sbjct: 230 SRRLEDPDERERVRERTERAK--KW 298


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.323    0.139    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,410,610
Number of Sequences: 28460
Number of extensions: 44881
Number of successful extensions: 307
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of query: 194
length of database: 4,897,600
effective HSP length: 85
effective length of query: 109
effective length of database: 2,478,500
effective search space: 270156500
effective search space used: 270156500
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)